>input_sequence_66148
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------------------------------------------------------------------------------AT
GACGACGACGACGACGACGACAAGGAAGAGACCCTTGACGGTCCCTGAGATGGCGCTGAGGGTGTGCGTGATCCCCCTCG
CCTTGGCCTCCCTGTGGGAGATGGCCACCAACAAGCAAGCCGATGACACCTACGGGGAGATCAGCTTCTCCAACCTCTCC
GGCTTCAAGTCAGCCTGCATAACCTTGTCCC-CTTTTTTGTTTCTGAATTCTGCTCCTGTTATGCGCAATTTCCTTGTTT
AATTTCCTAAGCCATATATAACTTCGGATGTGCTCTAAACAAACAAGTGTGTCAAGTCGCACCAAGACCAGTTATCGCCA
ATGGATTAGGCTATTGATTACTTAGGCTAATTTTTGCTTTCTCCCAGGTATTTAGTTTTCATTAACGCTGTCACTGCCGC
CTATTCCGTGGTCTCCATCCTGATGTCATCCTTCAAGTCCCTCGCTCGCTACGATTGGCTCATTTTCCTCCTGGATCAGG
TCCGATCATCACCATCTCCTTTCTCTTTTGCCCTTC-TACATTCATCTTCACTCCGCGCGTAAAAAC----TACTAGTAC
TACAGTGCTAAGTTGCTAACGAAAGCTTGGCCTCGCGCGCGCAGGCGGCGGCGTACCTGCTGGTGACATCGTGCTCGGCG
GCGGCGGAGCTGGTGTACCTGGCAAGGGAGGGCGACCGGGAGGTGTCGTGGGGCGAGGTGTGCTCCTACTTCGGTTGGTT
CTGCGGCAGGGCCACCGTGTCCGTGGCGCTGCAGGCCGCCGCGCTGCTCTGCTTCGTCGCGCTCTCCCTCGTCTCCGCCT
TCCGGGTCTTCCGCGAGTTCGACGCCCCTGGTGCTCATGTTGATTGCTCGGGGGACTCTGACTCCAAGCAGGCGCAAGAG
CAAGGACGAAGGTAG-----------------------------------------------------------------
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>chr6B_1_TraesCS6B01G214600
CAAATGCTTAGAGATAGTATAAGAACCTCTCTTTTGTAGTGGGTCATGCACTTAAAATCTATTCTATCACCTTCACGGGT
TATTTGCGTGTA-ATTCAAAGTATTCATTGCCTTGTCCCTGGCTACTAACTCAGTTAGGCATGGAAGACCAGGAGTTTGA
AGAAAAGTTTTCGACGACATCCCCAATCAGTTTGCTTGCGCGGTTAACGAAAGTGACATAGGTTCAAGTTATCTTGGAAG
TTGATTTCCGCTGCTTGTGTTTCTTTG-----------------------------------------------------
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-------------------------------------------------------------AAGACTAACTCCGAGGCTA
TATTTATTTAGGCAAGACTTGAC----------------------------TTTGTTG-----------GTAAAATGTTA
CGTAATGGATGTAAACTTTTGATTATTATAGTTCGTTGTACGCGATGCACACTGATTATGAGGTCACTGTTGCATTTAAA
ATCGATGGCCTTCGTCGGTGTCTAGCGCGAGCC-----------------------------------------------
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-------------------------------------------------------------------------CAAAAAA
AAACCTGATTTCAGCG----------------------------------------------------------------
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------------------------------------------------------------------------TTTCTTAG
CTTTCCTCTGGATCCCGTTTCACACACCGCGGGTGGCGTTCCTTTTGCGCGGGTGCGGCCGC------------------
--------------------------------------------------------------------------CGGGGT
CACCACGACCCCGCGGGGCGAGCACGCGTGCGCTCGGTGCCTGACGCCGCGTGTAATCCGTAGTGGAGGAGGCCAGACTA
CCAACGTCAGCATGTGTGATCCGTCCCCACGACAGCTATGGCGTCGCACCATGGTTACCGGAGAAAAAGGGCAATCTTTT
CCCTAATGGTGAGAGACGGCTACCAACCGCTCTCAAACGGCTCGACACTCATCGGCGGCGCCACGTAATGGTGGATGGAC
GGCCGAGGCCGTGTTGCCCCAACCC-----CACCACCCGTTCCTGCAGCTCCACGCACGCCACATTCTGTGGGCCAGCTC
T--ACTGCTCGAGCACTCACATGA---------GGGGGCTATGTATAGCACTGGCCCGTGTACTCTCCTATTTGGACACC
AGTGCTCGTCTCAGAGTCTTCCTCGACCCGGACCTCTCTGTTCACCGCACACGATTAGCAGGGGCAGCGGCGAGGAAGAT
GACGACGACGACGACGACGACAAGGAAGAGACCCTTGACGGTCCCTGAGATGGCGCTGAGGGTGTGCGTGATCCCCCTCG
CCTTGGCCTCCCTGTGGGAGATGGCCACCAACAAGCAAGCCGATGACACCTACGGGGAGATCAGCTTCTCCAACCTCTCC
GGCTTCAAGTCAGCCTGCATAACCTTGTCCC-CTTTTTTGTTTCTGAATTCTGCTCCTGTTATGCGCAATTTCCTTGTTT
AATTTCCTAAGCCATATATAACTTCGGATGTGCTCTAAACAAACAAGTGTGTCAAGTCGCACCAAGACCAGTTATCGCCA
ATGGATTAGGCTATTGATTACTTAGGCTAATTTTTGCTTTCTCCCAGGTATTTAGTTTTCATTAACGCTGTCACTGCCGC
CTATTCCGTGGTCTCCATCCTGATGTCATCCTTCAAGTCCCTCGCTCGCTACGATTGGCTCATTTTCCTCCTGGATCAGG
TCCGATCATCACCATCTCCTTTCTCTTTTGCCCTTC-TACATTCATCTTCACTCCGCGCGTAAAAAC----TACTAGTAC
TACAGTGCTAAGTTGCTAACGAAAGCTTGGCCTCGCGCGCGCAGGCGGCGGCGTACCTGCTGGTGACATCGTGCTCGGCG
GCGGCGGAGCTGGTGTACCTGGCAAGGGAGGGCGACCGGGAGGTGTCGTGGGGCGAGGTGTGCTCCTACTTCGGTTGGTT
CTGCGGCAGGGCCACCGTGTCCGTGGCGCTGCAGGCCGCCGCGCTGCTCTGCTTCGTCGCGCTCTCCCTCGTCTCCGCCT
TCCGGGTCTTCCGCGAGTTCGACGCCCCTGGTGCTCATGTTGATTGCTCGGGGGACTCTGACTCCAAGCAGGCGCAAGAG
CAAGGACGAAGGTAGAGGATGATCCATGATGAACAATCGCTGATATTTGGACCATCGTTCGTTTATGTGTCAATGGTTGG
CGATGGCGATGC------------GTCCTTGGTTTTCTTTACGAATGCTGTTTTCGGGAGGAGAAATGTTGTGAAATAAA
CTATATTGTTGTTAGAAAAAAGTTGAGGTTGTGTGCCACACACTTGATTGATCATGTGCAAG-T--GCACGTATACAGAT
ACAAGGGT-----ACCTCGGCTTGTCTCCCAAGCAATACACTATACAGAGGAGAAAGGAAGCGTGTGAGAACACATAACC
CTAATCTATGCGGACATACGCGTT-------CAACACCCCCACCCCACTCCGGCGTAGTCGAAACGTTGCCGG--TGACG
CAGAAACTGGACCAAAATTCCGCGAAGGTGGATGTCGGAAGCCCCTTAGTCATGACATCGGCGAACTGTTGAGCGGTAGG
AACATG--CACAAT------TCGTATCCGGCCAAGCGTGACCTGTTCATGAACGAAGTGAATATTGAACTCGGTGTGCTT
CGTCTGGCGATGATGAATAGGGTTAACGA---------------------------------------------------
------------AGACGTTTTCGCAGTAAACGACCATGGCCTTATGGACATCGCAAAGCAACTCGTGAAGGAGTTGCTAA
AGCCAATAGCACTCGGCAACAACGTTGGCCACTACCCGGTATTCTGCCTCAGCACTCGAGGAGGAAACTATGGGTTGTCG
TTTGGACAACCACGAGATCAGTGAAGGCCTGAGATAGACGCAATAGCCTGATGTAGCA------------------CCAG
TCCAGTCAGCTTCGGAGTAAGCCACGAGGTCGGTGGAGGAGGACGCCATCAGTGTGAGCCCAAAGAGCCATGGTGCCGTG
AATATAACAAAGAATCCGCTTCACTAGGGCCCAATAGGAGTTCCACGGAGCATGCATATGAAGACACACTCGATGCACGA
CATATTGTAGGTCCGGGCGAGTGAGAGTCAAGTACTGCAGGGCACCGATGCAA---CGATAAAATGTTGCATCTGGTGCA
GGCGAGCCGTCAAGTG
>chr6D_1
CAAATGCGTAGAGATAGTACAAGAACCTCTCTTTTGTATTGGGTCATGAATTTAAAATCTATTATACCACCTTCGCGGGT
TGTTTGTGTGCACATTCAAAGTATTCATTGGCTTGTCCCCGGCTACTAATTCAGTTAGGCATGGAAGACTAGAGATTTGA
AGAGAAGTTTTCGACGACGTCCCCAGTCAGTTTGCCTGCAGGGTTAACGAAAATGACATAGGTTCAAGTTATCTTGGAAG
TTGATTTCCGCTGCTTGTGTTTCTTTAAAGGGAAGCGCTAGGCATCAGACTACTGCAAATTTGCACCTATCAGACTAGTC
CATAGCCATTGGATAGGAGAGTGTTGGAGCGTTGGATTAGAATGCCCTCTTACGTGCAGTTTCCACATGATTAGGAGATA
AGTCTTTGATTGATTTTATCACTTTCCTTATTAATTGCTTCCAAAAAATCTGCTCTGATTAAATGCTCCCAAAAATCCGT
CCTACTAATTAACTCCCCCAAGATCTGTTTTATGTTCACATATATAGACTCTAGTTTGTTTGTTATTTCTTACAACTGGG
TGTTTGAAGCAAAACATTGGAGCATACGCTATTCAAAATTTAAGTTCTTCAAGCACAGTACACCGATGTTAGAAGCATAA
CTGATTAATGTACAATGAGAAGTGTATCCAGCCATCTATGAAGCGTGATGCAGCACCGTTGTAGGAAGCATGATTAGAGT
GTAAGAAAAACTTTGTGCCTTATCTTCTCATACTCGCTGTTTCCGTCGAGTGTGCTCCGATTCCGTAGGTTCTTCTTGTG
CGTGATACTATTTGGGCGTGGAAGCACTTGTGTGGTGGTGAGCTAGGTAGGAAGCACATATTGTGATAGGTGGAAACATG
GTTTACTAAAATTGGAAGCATAGTATAGCATACATTGAACTGTGTACATAAAGTACTTGTGTGGTAGTAAGGACTAGGAA
TTGAACCATTCTTCTGTTTCATGCTTCCACGTTAATCGGAGATTCTTTCGATTTGGCGAGATCTTATGTATAGTGCAAAC
AGTCTATTCTTTTTTGTTTGTGGCACGATGAAGATGTATTTTAGAGGACAGTAAATTGTTTCCAATGTTCCATTAAATTG
CTTCCGAGGAAACAAATATTTGTTCTCAAGCAGACTAATTTACCATTGAGACTACATTGGTTTAAAACCAAAAATACTAT
TGCTTCCAAAGAAACGACAATATGCATCCAAAGAAATAACAATTCCAGACACCACCATGTCGATGGCCGACATGCTCCTT
TTCAGTGTTGGCCATGCTTCCCATTGATGCTAGTCATGCTTCCTTGTGATGATAGTCGTGCTTCTTTCCAATGGTGAGTG
TGTTTCCTTCCATCGTCACATGGTGAACGGCATCAACCAGGAGTGACATGAACGGAGAAAGACTGCAACATCAATGCACC
ATTAGCTAATGTCCTCGTTGAAATCAAAGTAGTTCAATTGAGAATGCGAGGCGTGGTTTCATGTGGCCAGTCGCACGAGC
TCCCGTTGCTTGATGATCCTCCCTGATGCATGTTGAGCGTCCATGTTAGGATGGTGTCACGTCCAACTACAGTGGGGACG
ACATCCCGATGTGGTGTATCATGGAGTATATCATGTGGTGGTTGGCACCACCACACCATCTACTGTGGTGATGCAAGTGC
GAGGACCTTGTCCCTCGCACCATCGCCATATGGACAGATGTGCTGCTTCTTACAAACTTACTCTTTGCTTCCTGTAATCC
AAGTCCATGATCATGCGACCGAGCTAGGAAAATTTGATGAACAAATGAAAGGTAAATGGATAAGAACTCTACATACTAAA
ATGCTTCAACAATGGAAATATCCCTACGGCAAAAAGAACAATACCTAGGTCAGAACCTAGGTTAGATTAGGAATATAGGA
TGGTGCGGAGAGCGATTTGTAGATGGGAAGCATGAAAATTTGAGTATAGAAAACAACGCTATCTCAACATTAATAATCTC
AATCGGAAGCATACAAATCTGGACATGTAATTAGCACCAAAATTAGTTGATAATTCAGCGAGTTTGTGTATACCAAATTG
AGATGAAAAATAATGAATCAACTAGGGGAGATGAGACGAGGTGAAGACCGATTTGGTACATATTAGCGACGTCCGTCATC
ATTGGAACAAGGGACATCTATGGCTGCCACCTTCAACATCAAGCCGCAGTTGGTGTCGTTGTTGAGGGCCTGAGTAGACG
AAGTGGGAGCAAATTACACTCAGATCAAAACTAACGCAAATCATAACAACTAATTAAAAATGGATGAAAGATGAGATGAA
TCTGACCATAGTTCGGCTGGGTGATGGTGACGGGGCAAGGTCTGGTGATGGACTGGAGCAGCGATGGGGTTTACCTGCTC
GATGGTGAGATCAGGGGCGGGATGCCGCATCATTGGCGTGGATGAGTTGTAGTCGTCGCGGATTTTTTTTTGGGCGGAGT
GATGGTGGCAGAGGTAGCCGTCGCGGCGAGCTCGTGGATGAGTTTGAGACGGGGCAGGTGGGGTGAGATTAACTCGGGAG
GAATAAATTTTGTGATTAATTGACGGGCTGAAAATTTGCTTCTAAATATGGACCGCTGGAATAGGAAAGAATCAATGATG
CACGAGCGGTCTGATGAAAGCTTTCTATCAGACTTCTGATAGGCAGCGTTTCCCTTCTTTCAAGACTAACTTCAAGGCTT
TATTTATTTAGGCAAGACTTGACATTGTTCACCCGCAAAAATGGACTTGACTTTGTTGGTCTTATTTACGTAAAATGTTA
CGTAATGGATGTAAACTTTTGATTATTA--GTTTGTTGTACGCGATGGACACTGATTATGAGATAAGTGTTGCATTTACA
ATTGATGTCCTTCGTCGGTGTCTAGCGCGAGCCAAAGAAAAATTGACTTGAGCATTTCTTTAAAATCACTAGTTGAGGAG
TATTTGTTGCAAAGATCCCTCTAACCTCCCCAGGTTGTGATAAGTGGCGCGCTGCATGTGCGCCACTTGTCGCAACCTGA
AAGTTTTCCCTTTTTTCGTAGATCCGTTTATTTAAAACGTTTTATCTCTTAAACCGAGCGTTCAAATCTCGAACCGCTTT
CACCGTTGGATTCACCGCCTCGAGATCTTCAAAACTAGATCCCATATTGATAGGTTTTGACGAACTTTTTTTCCACAAAA
AAACCGGACGAAAAAATCCGAAAGATAAAACCGAACCGGGAGCACGGGTTTTTTCCTTTTCCGAAAGAGGCACGCCCGTG
CCTCTCGTGGAAGCAAAACCGTGACTCGTGAAAGGCAAAAAAAGAAGAGAAAACACATTCTTTTCGTTTTCGAGGAGGCA
CGGCCGTGACTCTCGCGAGAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGCGAAAGAAAGAAAATTTCC
GTTTTCGAGAGGCACGGCCGTGACTCTCTTGAAAGCACAACCGTGCCTCTCGCAGAAGCAAAATCGTGACTCGCGAAAGG
AAAAAAAACAGAAAACGCATTTTTTTCGTCTCCGAAGAGGGCACGGCCGTGACTCTCGCTAAAGCACAACCGTGCCTCTC
GCAGAAGCAAAACCGTGACTCTCGCGAAAGGAAAAAAAACGGAAAACACGTTTTTTTCATTCTGAGAGGCATGGCCGTGA
CTCTTGCGAAAGCAAAACCATGCCTCTCGCGGAAGCAAAACCATGACTCTGCCAAAAAACGCTTTTTTGCGCAAAAATGT
TTTTATTTTCGAATTTTTTTATCGAAAAGCTAAGGAAGACCGGTGAAAACCAAAACGTCGAAAAAACCCGAAAAAAAACC
GTTTAAAAAGTCGAAAACACATGAGGAAAAATAAAAAACAATATCCGGAGGAAGCGCCCAGAGCACGACACGTGATAAAT
GACTGAGAACGCACTAAATGGCGTTGATCGTTGCGAAGCTGGCCAAAGAGCGCTCGTTAACTAATTGCCCTCTTTCTTAG
CTTTCCTCTCGATCTTTACGGGCTGTGACGGGCTCTTTTCCTAGTTAATCTTCTCACCCCCTGATTTTCGGTGGGGATGG
GCCCCCCACCTTAATATCTATCCAATCAAAAGAGCCTAACTAGGACACTCCGTGAATCCGTGTGTAGCATTGCTCGGGGT
CGTCACGACCCCGCGAGGCGAGCACGCGTGCGCTCGGTGCCCGACGCCGCGTGTAATCCGTAGTGGGGGAGGCCAGACTA
CGAACGTCGGCATGTGTGATCCGTCCCCACGACAGCTATTGCGTCGCACCATGGTTACCGGAGAAAAAGGGCAATCTTTT
CCCTAATGGTGAGAGACGGCTACCAACCGCTCTCAAACGGCTCGACACTCATCGGCGGCGCCACGTAATGGTGGATGGAC
GGCCGAGGCCGTGTTGCCCCAACCCAAACCCACCACCAGTTCCTGCAGCTCCACGCACGCCACATTCTGTGGGCCAGCTC
CACTC--CTCCAGCACTCACATGACTACATGAGGGGGGCTATGTATAGCGCTGGCCCGTGTGCTCTCCCATTTGGACACT
AGTGTTCGTCTGAGAGTCCTCCAC--CCCGGACATCTCTGTTCACCGCACACGATCAGCAGAGGCAGCGGCGAGGAAGAT
GACGACGACGACGAC------AAGGAGGAGGCCCTTCAAGGTACCTGAGATGGCTCTGAGGGTGTGCGTGATCCCCCTCG
CCTTGGCCTCCCTGTGGGAGATGGCCACCAACAAGCAAGCCGATGACACCTACGGGGAGATCAGCTTCTCCAACCTCTCC
GGCTTCAAGTCAGCCTGCATAACCTTGCCCCACCTTTTC--TTCTGAATCCTGCTCCTGTTATGCGCAGTTTCCTTGTTT
AATTTCCTAAGCCGTATATAACTTCGAATGTGCTCTAAACAAACAAGTGTGTCAAGTCGCACCCAGACCAGTTATCGCCA
ATGGATTAGGCTATTGATTACTTAGGCTAATTTTTGCTTTCTCCCAGGTATTTAGTTTTCATTAACGCTGTCACTGCCGC
CTATTCCGTGGTCTCCATCCTGATGTCATCCTTCAAGTCCCTCGCTCGCTTCGATTGGCTCATTTTCCTCCTGGATCAGG
TCCGATCATCACCATCTCCTTTCTCTTTTGCCCTTC-TACATTCATCTTCACTCCGCCCGTAAAAACC----ACTAGTAG
TACAGTGCTAAGTTGCTAACGAAAACTTGGCCTCGCGCGCGCAGGCGGCGGCGTACCTGCTGGTGACATCGTGCTCGGCG
GCGGCGGAGCTGGTGTACCTGGCGAGGGAGGGCGACCGGGAGGTGTCGTGGGGCGAGGTGTGCTCCTACTTCGGTCGGTT
CTGCGGCAGGGCCACCGTGTCCGTGGCGCTGCAGGCTGCCGCGCTGCTCTGCTTCGTCGCGCTCTCCCTCGTCTCCGCCT
TCCGGGTCTTCCGCGAGTTCGACGCCCCTGGTGCTCATGTTGATTGCTCGGGGGACTCTGACTCCAAGCAGGCGCAAGAG
CAAGAGG-AAGGTAGATGATGATCCATGATGAGCAATCGCTGATATTTGGACCATCG----TTTATATGTCAATGGTTGG
CGATGGCGATGGCTATGGCGATGAGTCCTTAGTTTTCTTTACGAATGCTGATTTCGGGAGGAGAAATATTGTGAAATAAA
CTTTATTGTTGTTGGG--AAAGATGAGATTGTATGCGACACACTG-----ATCACGTGCAATTTGCACATATATATAGGT
ATAAGAGTGCACGATCTCGACTTGCCTCCTAAACTATACACTATATGGAAAAGAAA-------------AATACATGACT
CTAGCCTATACGTAAATACACGCT-------CAACACCCCTCCC-CTC-----GGCAGTCGAAACGTCACCGGGCTGACA
CATAGACTAGACTGAAACACATCAAAGGTGG---------------------------------ACTGTTGAGCTATAGG
AACATG--CAAAAC------TCGTATCCGGCCAAGCGCGACCTGTTCATGAACGAAGTGAATATCAAGTTCGACGCGCTT
CGTCCGGCGATGATGAACAGGATTGGCGGAGAGGTAGATGACGCGCTTTGTCTGGCGATGATGAACAGGATTGGCGGAGA
GGTAGATGGGAGAGATGTTGTCGCAGTAAACGACTGTGGCCTTATGGACATCGCAAATCAACTCCTGAAGGAGTTGGCGG
AGCCAAGAGCACTCGGCAACAGCGTTGGCCACTGCCCGGTATTCTGCCTCACCACTCGAGCGGGAAACTATGAGATGTCG
TTTAGACGACCACGAGATCAGTGAAGGTCCGAGATAGACGCAATAGCCTGATGTAGAGCGTCGAGTATCCGGACAGCCAG
CCCATTCGGCTTCCGAGTAGGCCACGAGGTCGGTGGAGGAGGACGCCATCAGCGTGAGCC--AAGACCCATGGTGTCGCG
AATATAACGGAGAATCCGCTTCACCAGGATCCAATGGGAGTCACACGGAGCATGCATGTGAAGACACACCTGCTGCACGG
CATACTGTAGGTCCGGGTGAGTGAGCGTCAAGTAGTGCAGGGCAACGACGATGGAGCGATAAAACGTTGCATCTGGTGAA
GGCGAGACGTCAAGTG
>chr6A_276
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----------------------------------------------------------------------TCCGAGGCTT
TATTTATTTAGGCAAGACTTGAC----------------------------TTTGTTAGTCTTATTTACGTAAAATGATG
CGTAATGGATGTAAACTTTTGATTATTA--GTTCGTTGTACGCGATGCACACTGATTATGAGATCAGTGTTGCATTTAAA
ATCGATGGCCTTCGTCGGTGTCTAGCGCGAGCCACAAAAAAAAAA-----------------------------------
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------GATTTCAGCG----------------------------------------------------------------
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------------------------------------------------------------------------TTTCTTAG
CTTTCCTCTCGATCCCGTTTCACACACCGCGGGTGGCGTTCCTTTTGCGCGGGTGCGGCCGC------------------
--------------------------------------------------------------------------CGGGGT
CACCACGACCCCGCGGGACGAGCACGCGTGCGCTCGGTGCCCGACGCCGCGTGTAATCCGTAGTGGAGGAGGCCAGACTA
CCAACGTCGGCTTGTGTGATCCGTCCCCACGACAGCTATGGCGTCGCACCATGGTTACCGGAGAAAA-------------
------TGGTGAGAGACGGCTACCAACCGCTCTCAAACGGCTCGACACCCATCGGCGGGGCCACGTAATGGTGGATGGAC
GGCCGAGGCCGTGTTGCCCCAACCCAAACCCACCACCAGTTCCTGCAGCTCCACG-ACGCCACATTCTGTGGGCCAGCTC
CACACTGCTCCAGCACTCACATGA---------CTGGGCTATGTATAGCGCTGGCCCATGTGCTCTCCCATTTGGATACT
AGTGTTGGTCTCAGAGTCCTCCAC--CCCGGACCTCTCTGTTCACCGCACACGATCAGCAGAGGCAGCGGCAAGGAAGAT
---GACGACGACGAC------AAGGAGGAGACCCTTGAAGGTCCCTGAGATGGCGCTGAGGGTGTGCGTGATCCCCCTCG
CCTTGGCCTCCCTGTGGGAGATGGCCACCAACAAGCAAGCTAATGACACCTACGGAGAGATCAGCTTCTCCAACCTCTCC
GGCTTCAAGTCAGCCTGCATAACCTTGCCCC-CCTTTAC--TTGTGAATCCTGCTCCTGTTATGCGCAATTTCCTTGTTT
AATTTCCTAAGCTGTATATAACTTCGAATGTGCTCTAAATAAACACGCGTGTCAAGTCGCACCACGACCAGTTACCGCTA
ATGGATTAGGCTATTGATTACTTAGGCTAATTTTTGCTTTCTCCCAGGTATTTAGTTTTCATTAACGCTGTCACTGCCGC
CTATTCCGTGGTCTCCATCCTGATGTCATCCTTCAAGTCCCTCGCTCGCTATGATTGGCTCATTTTCCTCCTGGATCAGG
TCCGATCATCACCATCTCCTTTCTCTTTTGCCCTTTTTAGATTCATCTTCACTCTGCGCCTAAAAAACTAGTACTAGAAC
TACAGTGCTAAGTTGCTAACGAAAGCTTGGCCTCGCGCGCGCAGGCGGCGGCGTACCTGCTGGTGACATCGTGCTCGGCG
GCGGCGGAGCTGGTGTACCTGGCGATGGAGGGCGACCGGGAGGTGTCGTGGGGCGAGGTGTGCTCCTACTTCGGTCGGTT
CTGCGGCAGGGCCACCGTGTCCGTGGCGCTGCAGGCCGCCGCGCTGCTCTGCTTCGTCGCGCTCTCCCTCGTCTCCGCCT
TCCGGGTCTTCCGCGAGTTCGACGCCCCTGGTGCTCATGTTGATTGCTCGGGGGACTCTGACTCCAAGCAGG--------
--------AAGGTAGAGGATGATCCATCATGAACAATCGCTGATATTTGGACCATCT----TTTATGTGTCAATGGTTGA
CGATGGCGATGC------------GTCCTTGGTTTTCTTTACGAATGCTGATTTCGGGGGGAGAAATGTTGTGAAATAAA
CTTTATTGTTGTTCGA--AAAGTTGAGGTTGCGTGCGACACACTTGATTGATCACGTGCAATCT--GCACATATATAGGT
ACAAGGGTGCA------CGACTTGTCTCCCAAACTATGCACTATACGAAGAAGAAA------------------------
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>chr4D_2030
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-----TTGTTGTTAGG--AAAGATGGGATTGCATGCCACACACTTCGTTGATCATGTGCTAG-T--GCACATATATAGGT
TTT---GTACACGACCTTGACTTGTCTCCCAAGCTGTACACTGTACGTAGGAGAAAGGAGGCGTGAC--AATACATGACC
CTAACCTATACGTACATACACGCT-------CAACAACCCCCCCTCCC-----CATAGTTGAAACGTCGCCGG--CGACG
CAGAGACTGGACCGAAACTCCTCAATGGTGGATGTCGGAAGCCCCTTAGTCATAACATCGGCGAACTATTGAGCGGTGGG
AACATG--CAGAATGCGGATC------CACCCAAGTGCAACCTGCTCAAGAGCGAAGTGTATGTCGAGCTCAATGTGCTT
CGTCCGACGATGATGAACAGGGTTGGCGGATAGGTA--------------------------------------------
----GATGGCGGAGACGTTGTCGCAGTACACAATCGTGGCCTTATGGACATCGCAAAGCAACTCCTGAAGGAGTTGGCGA
AGCCAAGAGCACTTAGCGACAGCGTTAGCCACTGCCTGGTATTCCGCCTCAGCGCTCGAGCGGGAAAACGTGGGTTGTCG
TTTAGACGACCACGAGATCAGCGAGGGCCCGAGATAGACGCAGTAGCCCGATGTAGAGCGTCGAGTATCTGGACAGCCAA
CCCAGTCAGCATCTGAATAGGCCACGAGGTCGGTGAGGGAGGATGATGTTAGCGTGAGCCC-AAGAGCCATGGTGCAGTG
AATATAGTGAAGGATCCGATTCATGAGGGTTGAATGTGAGTCACGTGAAGCATGCATGTGAAGGCATACCTGATGCACGG
CATACTGGAGATCCGGGTGAGTAAGTGTCAAGTACTGCAACGCACCGACGATGGAGCGGTAGAACGCCGCATCCGGTGCA
GGCGAGCCGTCAAGTG
>chr3D_2031
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------TGTTGTTAGT--AAAGATTAGATTGCATGCGACTCAATTCATTGATCACGTGCAAG-T--GCACATATATAGGT
ACAAGGGTGCACAACCTCGACTTGTGTCCCAAACTATACACTGTACGTAGGATTAAGAAGGCGTGAC--AATACATGACC
CTAACCTATATGTACATACACATT-------CAACACCCCCC-----------CCTAGTCAAAACTTTGCAGG--CGATG
CAGAAACTTGACCGAAACTCCTCGAAGGTGGATGTCGGAAGCCCCTTAGTCATAACATCGGCGAACTATTGAACGGTGGG
AACATG--CAAAACGCGGATT------CGTCCAAGTGCAACCTGCTCACGAACAAAGTGTATGTCGAGCACAATGTGCTT
CGTCCTTCGATGATGAACAGGGTTAGCGGATAGGTA--------------------------------------------
----GACGGCAGAGACATTGTCGCAGTACACGACCATGGCCTTATGGACATTGCAAAGCAACTCCTGAAGGAGTTGGCAA
AGTCAAGAGCACTCAGCTACAGCGTTAGCCACTTACCAGTATTCCGCCTCAACGCTTGAGCGGGAAACCGTGGGTTGTCG
TTTAGATAACCACGAGATCAACGATGACCAGAGATAGACGCAGTAGCCTGATGTAGAGCGTCCAGTATCCAGACAGCCAG
CC-AGTCAGCATCCGAATAGGCCACAAGGTCGATGGAGGAGGACGCCGTCAGTGTGAGCCC-AAGAACCATGGTGCCGTG
AATGTAGTGAAGGATCCGCTTCACCAGGGTCCAATGGGAGTCACGTGGAGCATGCATGTGAAGGCACACCTGCTGCATGG
CATACTGGAGATCCGGGCGAGTAAGCGTCAAGTACTATAACGCACCGACGATGGAGCGGTGGAATGCCGCATCTAGCGCA
GGCGAGCCATCAAGTG
>chr2D_2031
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------TGTTGTTAGG--AAAGATTGGATTGCATGCGACACAATTGATTGATCACATGCAAG-T--GCACATATATATGT
ATAAGGGTGCATGACCTCGACTTGTCTCCCAAGCTATCCACTGTACGGAGGAGAAAGGATGCGTGAC--AATACATGAGC
CTAACCTATAGGTACAGACATGTT-------CAACACCCCCC------------ACAGTCGAAATGTCGCCGG--CGACA
CAGAGACTGGACCGAAACTCCTCGAAGGTGGATGTCGGAAGTCCCTTAGTAATAACATCGGCGAACTGTTGAGCGGTGGG
AACATG--CAAAAC------TTGTATCCGCCCAAGTGCAACTTGCTCACGAACAAAGTGTATGTCGAGCTCAATGTGCTT
CGTTCGGCGATGATGAACAGGGTTGGTGGATAGGTA--------------------------------------------
----GACGGCGGAGACGTTGTCACAGTACAGGATCGTGGCCTTATGGACATCGCAAAGCAACTCCTGAAGGAGTTGGCAA
AGCCAAGAGCACTCAGTGACAATGTTAGCCACTGCCCAGTATTCCGCCTCAGCACTCGAGCGGGAAACCTTGGGTTGTCG
TTTAGACGACCACGAGATCAGCGAAGGCCCAAGATGGACACAGTAGCCTGAT----------------------------
--------------------------------------------------------------------------------
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>chr2B_2031
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------TGTTGTTAGG--AAAGATTGGATTGCATGCGACAAAATTGATTGACCACGTGCCAG-T--GCACATATATAGGT
ATAAGGGTGCACGACCTCGACTTGTCTCCCAAGCTATCCACTTTGCGGACAAGAAAGGATGCGTGAC--AATACATGATC
CTAACCTATACTCACATACACGTT-------TAACA------CC-CCT-----CGCAGTCGGAATGTTGCCGG--CAATG
CAGAGACTAAACTGAAACTCCTCGAAGGTGGATGTCGGAAGTCCCTTAGTCGTAACATCGGCAAATTGTTCAGCGGTGGG
AACATG--CAAAAC------C------CACCCAAGTGCAACTTGCTCATGAATGAAGTGCATGTCGAGCTCAATGTGCTT
CGTCCGACGATGATGAACAGGGTTGGCGGATAGGTA--------------------------------------------
----GAAGGCGGAGACGTTGTCGCAGTACACGACCATGGCTTTATGGACATTGCAAAGCAACTCCTGAAGGAGTTGGCGA
AGCCAAGAGCACTCGGCGACAGTGTTAGCCACTACCTAGTATTCCGCCTCGGCACTCAAGCGGGAACCCATGGGTTGTCA
TTTAGACGACCACAAGATTAGCGAAGGCCCAAGATAGACACAGTAGCCCGATGTAGAGCGTCAAGTATCTGGGCAGCCAG
CCTAGTCGGCGTCCGAATAAACAAAGATGTCGATGGAGGAGGACACCATCAGCGTGAGCCC-AAGAGCCATGGTGCCACG
AATATAACGAAGGATCCGCTTCATCAGGGTCCAATGGGAGTCATGTGGAGCATGCATGTGAAGTCACACCTGTTACATGG
CATACTGGAGATCTAGGCGAGTAAGCATCAAGTACTGCAGCGCACCGATGATGGAGCAATAAAATGATGCATCTGGTGCA
GGCGAGCCGTCAAGTG
>chr2A_2031
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------TGTTGTTAGG--AAAGATTGGATTGCATGCGACACAATGT-TTGATCATGTGCACA-T--GCACATATAAAGGT
ATAAGGGTGCATGACCTCGACTTGTCTCCCAAGCTATCCACTGTATAGAGGAGAAAGGTTGCGTGGC--AATACATGAGC
CTAGCCTATAGGTACAGTCATGTT-------C-ACA------CA-CCC-----CGCAGTCGAAATGTCGTCGG--CGACA
CAAAGACTGGACCGAAACTCCTCGAAGGTGGATGTCGGAAGTCCCTTAGTAATAACATCGACGAACTGTTGAGCGGTGGG
AACATG--CAAAAC------TTGTATCCGCCCAAGTGCAACTTGCTTAGGAACAAAGTGTATGTCGAGCTCAATGTGCTT
CGTTCGGCGATGATCACCAGGGTTGGCGGATAGGTA--------------------------------------------
----GACGGCAGAGATGTTGTCACAGTACACAACCATGGCCTTATGGACATCGCAAAGCAACTCCTGAAGGAGTTGGCAA
AGCCAAGAGCGCTCAGTGACAGTGTTAGCCACTGCCCAGTATTCCACCTCAGCACTCGAGCCGGAAACCTTGGGCTGTCG
TTTAGATGACCACGAGAACAGCGAAGGCCCAAGATGGATGCAGTAGCCTGAT----------------------------
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>chr4A_2043
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------------------AAAGATGAGATTGCATGCGACACAATTCATTGATCATATGCAAG-T--GCACATATATAAGT
ACAAGGATGCACTATCTCGACTTGTCTCCCAAGCTATACACTATATGTAGGAGAAAGGAGGCGTAACA-AATACATGACG
CTAACCTATACATACATACATACACGTTCAACAACCCCCAGC-----------CCTAGTCGAAACGTTGCCGG--CGACG
CAGAGACTGGACCGAAATTCCTCGAAATTGGATGTCGGTAGCCACTTAGTCATGACATCGGCGAACTGTTGAGCAGTGGG
AACATG--CAAAAC------CTGTATCGACCCAAGTGCAACCTGCTCACAAACGAAGTGTATGTCGAGCTCAATATGCTT
CGTCCGCTCATGATGAACATGGTTGGCAGATAGGTA--------------------------------------------
----TACAGCGGAGACGTTGTCCCAGTAGACGATCGTGGCCTTATGGACATCGCAAAGCAACTCCTGAAGGAGTTACCGA
AGCCAAGAA-----AGCGACAACGTCAGCTACTGCCCGATATTCCGCCTCAGCACTCGAGCAGGAAACCGTGGGTTGTCA
TTTAGACGACCAAGAGATCAGCGAATGCCTGAGATAGATGCAGTAACCTGATGTACAACATTGAGTATCGGGGTAACCAG
GCCAGCCGATGTCCGAATAGGCCACATGGTCGATGGAGGAGGATGCTGTCAGCGTGTGTCC-AAGAGTCGTGGTGTCGGG
AATGTAGCGAAGGATCTGCTTCACCAGGTTCCAATGGGAGTCACAGTGAGTGTGCATATGAAGGCACACCTGCTGCACGT
CATACTGAAGATCCGGGCGAGTAAATGTCAAGTACTGCAGTGCACCGATG------------------------------
----------------
>chr2D_2058
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---------------------------------TGCGACTCAATTCATTGATCACATGCAAG-T--ACACATATATAGGT
ACAAGGGTGCACAACCTCGACTTGTCTCCCAAGCTATACACTGTACGTAGGAGAGAGGAGGCGTGAC--AATACATGACC
CTAACCTATACGTACATACACGTT-------CAACACCCACC-----------TACAGTCGAAACGTCGCCGG--CGATG
CAAAGATTGGACCGAAACTCCTCGAAGGTGGATGTCGGAAGCCCCTTAGTCATAACATCGGCGAACTGTTGAGCGGTGGG
AACAATGCAAAA-CGCGGATC------CGTCCAAGTGCAACCTGCTCACGAACGAAGTGTATGTCGAGCTCAATGTGCTT
TTTCCGGTGATGACGAACAGGGTTGGTGGATAGGTA--------------------------------------------
----GACGGCGGAGACATTGTCACAGTACACGACCGTGGCCTTATGGACATCGCAAAGCAACTCCCGAAGGAGTTGGCGA
AGCCAAGAGCACTCAGCGATAACGTTAGCCACTGCCCGGTATTCCGCCTCAGCGCTCGAGCGGGAAACCGTGGGTTGTCG
TTTAGACAACCACAAGATCAGCGAGGGCCCATGATAGGCGCAGTAGCCTGATGTAGAGCGTCGAGTATCCGGACAGCCAG
CCCAGTCGGCTTCCGAATAGGCCACGAGGTCGGTGGAGGAGGACGCCGTCAGCGTGAGCCC-AAGAGCCATGGTGGCGTG
AATGTATCAAAGGATCCGCTTCACCAGGGTTCAA-------------GAGCATGCATGTGAAGGCACACTTGCTACACGG
CATACAAGAGATCCGGGCGAGTAAGCGTCAAGAACTGTAATGCACTGACGATGGAGCGGTAGAACGCCGCATTCGGTGCA
GGTGAGCCGTCAAGT-
>chr5D_2121
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------------------------TCTCCCAAGCTATATGCTGTACGGAGGAGAAAGGAGGCATGAAA-AATACATGA--
CTAAACTATACGTACATACACGTT-------CAACACCCCCC------------A-AGTCGAAACATCACCGA--CGATG
TAGAGACTGGACCGAAATTCCTCGAAGGTGGATCTCGGTAGCCCTTTAGTCATAACATCGGCAAACTGTTGAGCAGTGGG
AACATG--CAAAAC------CCGTATCCGCCCAAGGGCAACCTGCTCACGAACGAAGTGTATGTCGATCTCAATATGCTT
CGTCCGGTGATGATGAACAGGGTTGGCGGATAGGTA--------------------------------------------
----GATGGCAGAGACATTGTCGCAGGAGACGACCGTGGCCTTATGGACATCGCAAAGCAACTCCTGAAGGAGTTGGTGA
CGCCAAGAATACTTAGCGACAATGTTAGCTACTGCCAGGTATTCCA--TCAGCACTCGAGAGGGAAACCATGGGTTGTCA
TTTAGATGACCACGAGATTAGTGAAGGCCCGAGATAGACGCAGTAGCCTGATGTAGAGCGTCGAGTATCTGGGCAGCCAG
CCCAGACAGCGTCCAAATAGGCCACGAGGTCAATGGAGTAGGATGCCGTCAGTGTGAGTCC-TAGAGCCGTGGTGCCGCG
AATGTAGCGAAGGATCCGCTTCACCAGGTTCCAGTGGGACTCACGAGGAGCATGCATGTGAAGGCACACCTGCTGCACGA
CATACTAAAGATCCGAGCGAGTAAGCGTCAAGTACTGCAACACATCGATGTTGGATCGATAGAATGCCGCATCTGATGCA
GGCGAACCATCAAG--
>chr5B_2222
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----------------------------------------------------GCGTAGTCGAAACGTCGCCGG--TGACG
CATAGACTGGACTGAAACTCCTCGAAGGTGGATGTCGGAAGCCCCTTAGTCATGACACCGGCGAACTGTTGAGCGGTAGG
AACATG--AAAA-CTTGTATC------CGACCAAGTGCAACATGTTCACCAACAAAGTGTATGTCGAGCTCGATATGCTT
CCTCTGGCAATGATGGACATGGTTAGCGGATAGGTA--------------------------------------------
----GACGGCGGAGACGTTGTCGCGGTACACGACGATGGCCTTAT-GACATCGCAAAGCAACTCCTGAAGGAGTTGGTGA
AGCCAAGAGCACTTAGCGACGACGTTAGCCACTGCCCAGTATTCCGCCTCAGCACTCCAGCGGGAGACCGTGGGTTGTCG
TTTAGATGACCACGAGATCAGCGAAGGCCCGAGATAGACCCAGTAGCCTGATGTAGAGTGTCGAGTGAACAGACAGCCAG
CCCAGTCGGCGTCCGAATAAGCCACGAGGTCAGTGGAGGAGGATGCCGTCAGCATGAGCCC-AAGAGCCATGGTGCCACG
AATATAACGAAGAATCCGCTTCACCAGGGTCCAATGGGAGTCACGCGGAGCATGCATGTGAAGACACACTTGCTGCACGG
CATACTAATGGTCCGGGCGTTTGAGCGTCAAGTACCGCAGCGTGGTGATGATGGAGCGATAAAATGTTGCATCCGGTGCA
TGCAAGTCGTCAAG--
>SNPs
-------S-----------S------------------S---------S-S------------S--S-------S-----
-S----S---S-------------------S--------S---------S-------------------S--SSS-----
---S--------------S------S---------S---SS-----------S---------------------------
--------------------------S-----------------------------------------------------
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-------------------------------------------------------------------------------S
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----------------------------SS--------------------------------S---S-------------
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---------------------------------------------------------------------------S----
-----S--------------------------------------------------------------------------
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---------S----------------------------------------------------------------------
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-----------------------------------------S--------------------------------------
--------S-----------------------------------------------------------------------
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-------------------------------------S------------------------------------------
S---------S--------------------------------------S-----------S------S----------S
----S-------------S---S-SS-----------------------------S-----S------------------
---------------SSSSSS-----S-----------S-----------------------------------------
--------------------------------------------------------------------------------
---------------------------S-----S----SSS--------S------------------------------
-------------S------------S-----------------------------------------------------
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-----------------------S---------------------------------------------------S----
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----SSSS-------------------------------------------------SSSS-------------------
--------------------------------------------------S-----------------------------
--S-------------SS----------------------------------------------------S----S--S-
-------------------S--------------S------------------------S-----SS-S--S----S---
----S----S--S------S---------------------S--S-S-SSSS----------------------------
-------------S-------S----------------------------------------------------------
----------S--------------------------S--------------------------S--S----S-------
-----------------S-------S--S---------------------------------------------------
-------------------S--------------------------------------------S---------------
------S-----------------------------------------------------S-------------------
---S----------------------------------------------------S-----------------------
S------------S-----------------------------------------------S------------------
------------------------S----S-----S-----SS---------------------------S---------
----S--------------------S------------------------SSS---------------------------
----------------
>forward_4616
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------------------------------------TCTGTTCACCGCACACGATT------------------------
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>reverse_6586
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-------------------------AGTCAAGTACTGCAGGGCAC-----------------------------------
----------------
