>input_sequence_66118
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-------ATGGGCTCTCTCATGGCTGGCTGGAGCTCCCATGCGCTCGACGACGACCTCAAAGGTACTACGTC-----CGC
CGTGT--------ACAGCCATCCACCATCCGTAGTGCATGCAACATCACGTTGCAAGATTCATAATTTGTCTTCTGTTAT
GG----------CATCCATGTATGTATGCAGTTCGTTTTATGAGGAACCGGTCGCTGACCAAGGACGAGGTGGAGGCC-T
TCTGGAGGCAGCACAAGAAGCCGGCGCCGGAGGGCAACGTCGACGGCGGCGAGACCGTCGTCGCCTCCTCTCCCCTCGTA
CGTAACCGGTTCGCATGCATGCGTGCATCCGTCGGATTTGCATCGGGCTCCTTTATCAAGCTTGTCAAATGCGTA--CTT
GATTTTTTTTACTCTGCTTGCATGTGTTGGTTAATTAGAAGGGGAGCCCGAGGTCGACCCCGCGTCCGTCGACTCTGTCT
CATGTCCGTTCGTCGCCGCCGGTGATGACT------ACTAGCGTGGACGGT------GACGGCGAGGCTGCCGCTAGCCC
CAGCGCGAGCCGCGATTGGTACGTA---TAGCTTACCTAGCATGAGGTTATTGAGTTCACACATGAACATATTCATAACA
TGCATGGATCCATGTGTACATGTATCGATCACGTACGGCTGGTGCGTAACGTACCTTACCTAGCATGAGCTTCTTGAGTC
--TTTTCTGTTTGCGAAATGAGCTTGTTGAGTTCATACATATTACATGAACATATTCATAGCATGCATGGATCCATGTGT
A----CATGTATCGATGACGTACGG---CTGGTTGTGGTTGTGTGCATGCAGGTGGACGAGGAGCAGCTGGGCGTTCCTC
AACGAGCCGCCGCCGCCGCCGAAGCGCGAGGGAGCAGGCGTTAGGCAAGGCGCCGCCGCCGCCGTCTGA-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>chr5B_1_TraesCS5B01G503600
AAACATGTGTGTATGTATTAGG-TTTTTTTATTGCTCGGAGTAGTGTGAGCACTTGAAAAAAAAACATAAGAGTGTGTAG
CACTTGAAGAATAAAAATAAAACA-ATAGTGCTTCCACCAAATTCTAGGAGTGTTCCGCCTTCATAG-AACTAGTGCCTT
CCCTATTACGAGCACTAGGCTAAAATGCCTACCGCCATTTTGAGTGTTCTGC----CTTTTTTTTCATAAAAATCGTTAA
--AAATCTATTAATATGGGATCTAGTTTTGAAGGTCTCAACGCTAGAAATCTAATGATGAAAACAATTAATAATTTGGAC
GTCTTGTTCTAGGGATACAAAAATAAATCTATGAAATAAAAAATAAATCTATGAAAAA-GAAAAGAAAAACCTCGTGGGT
TGTGATAAATGATACAGTGCATCACTTCTCAGCACAGGAGAAATGAGAGTAACATTTACAAAGTCGAAGAATAC-----T
CTTTTCGTTGTTCAAAACCAAGGCCATCGAACTTCGGGTGAAAGCTTGT-GACACCCTCTCTGTTTTCATTTCGGCGCCG
TCGTATGTGAGGTGGC--TGTACGGTTACGGCCCGTCGCACTTGTGACATCCC----CTCTGTTTTCGTCGTAT----GT
TCGTGCCGCGGTAACGAATGTACGC---------------------ATGCAGTGCGGTGCACGCGCAGCTAGCGTCCAAC
GCTGCCGATAACGATGACCTGCGGCTCT--ACTAGAGACCGACCGACGGACATGACGATCGTTCGAGAGGTTGACGACAA
AAGGAGCCGCACACATACGCCCCAGCATGCATGCACGCACG----CACTGACTCGCAGGCGCGTGCATGGCAGACACGCA
GCACTGGGAGACGACG--GTGTGCGCCAGCTACGTGCTTGGACAGCTCAAACTTATCCATGGATGCTT------TCTAGC
GCGTATAAAAGGGCATGCTGTCCGCTGAGGCTTATC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ACCAC
CGATCCATCGATCACTCGTATGCATGCTCGTCGATCAAGTTAATTGCTAC---------------------------CTA
CGTCGATATGGGCTCTCTCATGGCTGGCTGGAGCTCCCATGCGCTCGACGACGACCTCAAAGGTACTACGTC-----CGC
CGTGT--------ACAGCCATCCACCATCCGTAGTGCATGCAACATCACGTTGCAAGATTCATAATTTGTCTTCTGTTAT
GG----------CATCCATGTATGTATGCAGTTCGTTTTATGAGGAACCGGTCGCTGACCAAGGACGAGGTGGAGGCC-T
TCTGGAGGCAGCACAAGAAGCCGGCGCCGGAGGGCAACGTCGACGGCGGCGAGACCGTCGTCGCCTCCTCTCCCCTCGTA
CGTAACCGGTTCGCATGCATGCGTGCATCCGTCGGATTTGCATCGGGCTCCTTTATCAAGCTTGTCAAATGCGTA--CTT
GATTTTTTTTACTCTGCTTGCATGTGTTGGTTAATTAGAAGGGGAGCCCGAGGTCGACCCCGCGTCCGTCGACTCTGTCT
CATGTCCGTTCGTCGCCGCCGGTGATGACT------ACTAGCGTGGACGGT------GACGGCGAGGCTGCCGCTAGCCC
CAGCGCGAGCCGCGATTGGTACGTA---TAGCTTACCTAGCATGAGGTTATTGAGTTCACACATGAACATATTCATAACA
TGCATGGATCCATGTGTACATGTATCGATCACGTACGGCTGGTGCGTAACGTACCTTACCTAGCATGAGCTTCTTGAGTC
--TTTTCTGTTTGCGAAATGAGCTTGTTGAGTTCATACATATTACATGAACATATTCATAGCATGCATGGATCCATGTGT
A----CATGTATCGATGACGTACGG---CTGGTTGTGGTTGTGTGCATGCAGGTGGACGAGGAGCAGCTGGGCGTTCCTC
AACGAGCCGCCGCCGCCGCCGAAGCGCGAGGGAGCAGGCGTTAGGCAAGGCGCCGCCGCCGCCGTCTGATCATCATCTCT
TTA-----------------------------ATTACTTTGCTAA--GTTAGCTTTGTACTATCCCTGTAAATACGTACA
GTAC---------------------------------------------------TACGTACCAGCCGTGTAGATATACT
ACGTACAGTACTACTTGGAGTGGTGGCTTTGC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TAATGTTTGATCTCTGTAGCATGTGG----
CATGTCACTTTCTGTATTGTCGTTCATGTAACCTTGGAGATATACTATGTGTACACGTCACTTTCTGTATTTGGCATCTC
AGATAGTACCAAAAACAAAATTCGAGACTAAAACAAGATGCACCAGTCGATTGGAAGCGACTAACCACCAGTCAATTGGA
CGATAAACATCAGATCCGCACGATCGTACAACCACGTCTATATATGCAGTTCGTTTCATGAGGAACCGGTGGCTCACCAA
GGAGGAGGTGGAGGCCTTCTGGAGGCAGCAGAAGAAGCCGGCGCCCGAGGACAACGTTAAAGGCGGCACGACCGTCGTCA
CCTCCCCGCTGTCGAGGTCGACCCCGCGTGCGTCGACTCTGTCTCATGTCCGTTCGTCGCCTCCGGACAAAGCGACGAGA
GCGCTAGCTAGAATACACAGTGAACATTCCATAAGGTTCCTGTACGCCTCTTTTTCTATAGGTTTTGGGAACT-------
--------------------------------------------------------------------------------
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--------TAGAAAGTTCGATCCGGTTTTGTTTCAGTTTTATATTTTTGAATTTACCATTTTTCTTTACTTTTTATTAAA
AAAAATTAGATTTTTAAAATGTTTGTGTTTTGAAAATGCTCAAAAATTTTAAATATATTCGCATCTAAGAAATGTTCACA
GTTTGAAATTAGGTTCGAAAATGATTAGCCTTATGTAAAATATGTCAATAAATGTTGGGATTTAATTTTTATGATTTTTA
AAAAATGCTTGCAAATTTGCAAGAAAAACATTCAGAATTTTGAAAAATTAAAAAATAATGTTGTGGAAAATTTTCCTCAG
TTTTGCAAAAATTGTTTGCATTTTATAAAATATGTTCAATTTTTGTAAAAGTATTCATTTAAAAAATA
>chr5B_1
AAAGATGTGTGTATGTATTAGTTTTTTTTTATCGCTCCGAGTAGTGTGAGCACTTGAAAAAAA-ACATAAGAGTGTGTAG
CACTTGAAGAATAAAAATAAAACA-ATAGTGCTTCTGCCAAATTCTAGGAGCGTTCCGCCTTAAAAAAAACTAGTGCCTT
CCGCCA--------------------------------TTTGAGTGTTCTGTCATTTTTATTTTTTTTCCATAAAAATTG
TCAAATCTATGAACATGGGATCTAGTATTGAAAATCTCAGCGCTAGAAATCTAATGATG---------------------
-------------------------------------------------------AAA-A--AAAAACAACCTCACGTGT
TGTGATAAATGATGCAGTGTGTCACTTATCGGCAGTGGCGAAATGAAAGTAACGCTTGCAAAGAGTGCTTCTTAATTAGT
ATTTTGATTCTTCAAAATCAAGGCCAGTGAACTTCGGATGAAAGCTTGT-GACATCCCCTCCATTTTCATTTCGACGCCG
TCGTATGTGAGGTGGC--TGTACGGTTACGGCTCGTCGCGCTTGTGACATCCCC-----CTGTTTTCGTCGTATATATGT
TCGTGTCG--------------CGC---------------------ATGCAGTGCAGCGCACGCGCAGGTAGCGTCCAAC
GCTGCCGATAACAATGACCTGCGGCTCT--ACGAGAGACCGACCGACGGACATGACGATGGTTCGAGAGGTTGACGAGAA
AAGGAGCCGCACGCATACGCACCAGCCTGCACGCATGCACGGACGCACTGACTCGCAGGCGCGTGCATGGCAGACACGCA
GCACTCGGCAACGACGATGTGTACGCAAGCTACGTGCCTGGACAGCTCAAACTTATCCATGCATGCTA------GCAAGC
GGGTATAAAATGACATGCTGTCCGCTGAGGCTTATC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ACACC
--------------------------------------------TTCAGCTTTCCAGATAAAAGATCGAGTTTGCTGCTA
GGTCGATATGGGCTCTCTCATGGCTGGATGGAGCTCACACGCGCTCGATGACGATCTCAAAGGTAC---GTC-----CGC
CATGT--------ACAGCCATCCACCATCCGTAGTGCATGCAGCTTCACGTTGCAAGATTCATAATTAGACTTGTACTAT
AATGATATCT---ATCATTCTATCTGTGCAGCTCGTTTCATGAGAAATCGTTCGCTGACCAAGGAGGAGGTGGAGGCC-T
TCTGGAGGCAGCACAAGAAGCCGGCGCCGGAGGACAACGTCGACGGCGGCGAGACCGTCGTCGCCTCCTCTCCCCGCGTA
CGTAACCGGTTTTTGTAAATGATGCAA------------GCATCGGGCTCCTTAACTAGTCTGGTAAATTACTTATATTT
TTGTC------CTCTGCTTGCATGTGTTGATTAATTAGCAGGGGAG---------------------GTCGACTCTGTCT
CATGTCCGTTCGTCGCCGCCGGCGTTGACCAGTACCAGTAGCGTGGATGGT------GACGGCGAGGCTGCCGCTAGCCC
CAGCGCGAGCCGCGATTGGTACGTA---TAGCTTACCTAGCATC------------------------------------
--------------------------------------------------------------------------------
--------------------AGGTTTTTGAGTTCA-------TACATGAACATATTCACAGCATGCATGGATCCATGTGT
ACATGCATGTATCGATCACGTACGG---CTGGTTGTGTGCA--TGCATGCAGGTGGACGAGGAGCAGCTGGGCGTTCCTC
AACGAGCCGCCGCCGCAGCAGCGCCGCGAGGGAGCAGGCGTTGGGCAAGGCGCCGCCGCCGCCGTCTGATCATCATCTCT
TTAATTACTTTTTTTTGCATGGTATCTCTTTAATTACTTTGCTAA--GCTAGCTTTGTACTATCCCTGTAAATACGTTAT
ACGTAC------------------------------------------------GTACGTACCAGCCGTGTGTAGCTAAT
GTTTGATACCTTTTGTATTGTCGCTCATGTAACCTTGGAGATATGCTATGTGTACGTGTCACGATCTATATTGGCATCTC
AGATAGTACAAAATACAAAATTTTGGGACTAAAATTTTGAGCAATTTTTTTGCACACACCTCTACTAATGTCTTTCCAGG
GAGAAAATGTGCAGGATGTTAGAGAACTTGTTGATGTTTATCCAAAACAATTCAGATTTTTTTTATTTTTCTTCTTCGAA
ATTTGTTGTGTTCATGCGGGTGCATTTGAGCTTGAGATTATAAAAACACTTAATGTTTGATCCCTATACTATGTGG----
CATGCCACCTTTTGTATTGTCGCTCATGTAACCTTGGAGATATGCTGTGTGTACATGTCACTATCTATA-TTGGCATCTC
AGATAGTACAAAAAACAAAAAATGGGACGACAAAAAGACCTCTACGAGGCTGTGACGGTCGAGATCGGTTGTCGCATGTT
GCCAGGCTCCTTCTCTAGGGGCGCCATCATCCTTGGCTGGAAGACCTGGCAGCTATGTGGAATGTTGTCGAGGATGTCCC
GCGGCAAAGAGCAGGTCGGTGAGGCGGAGCCGTGATTGGCTCACATTGCTTTTAAGGAAAAGGGACTTTATAAATAAAGC
CACCAGGCATAGTAACAGAGCAACCACCAAGCCAATAAGTATCACAACAACAGCTAATAAGGTTCGCATACATGGCTACC
TAGCCAATCATGACACGCAAGCCAGCTCTCAGAAACCAGAAGGAAGGGAAATTAAGGCACCACCCGAAAATCGTCGCAAC
AGGGATGAAGTTGTAGACCGAATCTTGGATACTATAGCGTCAAAAGCCTCGTGGTCCGCCTTCTTAATCAATAATCTTCA
CTGCTGCAGAAAGGCACCAGATTTAAATAAGCAGCTCACTGGGTTCGTCGGAAAGGTATGTTCAATAGTAAGCTTGTTTC
TAGTGTTCCAAAGAAGAAAGACATACCTCCAACTCTTCATGATGATAGAAGCCCTTAGTTGGAGTAATGTGTTGAGGGGT
AGTGTGTTTGGACCCTCATCTTCTATTTTGGATATCTTTATGAATGGTGTAAGACTTGGATGATGGTACTTCATGGAACT
TGTTTACCTAGAAGGTTCGATCCGGTTTTGTTTCAGTTTTATATTTT-GTATTTACCATTTTTTTCTTTCTTTTTATTAA
TTTTTTTAGATTTTTAAAATGTTTGTGTTTTGAAAATGCTCTAAAATTTTAAATATATTCGCATCTAAGAAATGTTCACA
GTTTGAAATTAGGTTCGGAAATGGTTAGCCTTATGTAAAATATGTCAATAAATGTTGGGGTTTATTTTTTACAATTTAAA
AATAATGCTTGCAAATTTGAAAGAAAAACATTCAGAATTTTGAAAAAGTTAAAAATAATGTTGTGGAAAATTTTCCTCAG
TTTTGCAAAAATTGTTTGCATTTTATAAAATATGTTCATTTTTTGTAAAAGTGTTCATTTAAAAAA--
>chr5D_1
AAACATGTGTGGATGTATTAG--TTTTTTTATCGCTCGGAGTAGTGTGAGCACTTGAAAAAAA-AGATAAGAGTGTGTAG
CACCTGAAGAATAAAAATAAAACA-ATAGTGCTTCCGCCAAATTCTAGGAGCGTTCCGCCTT-AAAAAAACTAGTGCCTT
CCCTATTACGAGCACTAGGCTAAAATGCCTTCCGTCATTTTGAGTGTTATGCCATTTTTGTTTTTTCATAAAAATCATCA
--AAATCTATTAATATGGGATCTAGTTTTAAAGATCTCGGCGCTAGAAATTTAACGGTGAATACAATTAATAATTTGGAC
GTCTTGCTCAAGGGT---------------------TAAAAAGTAAATCTATGAAAAA-G--AAAAAAAAACTCACGGGT
TGTGATAAATGATGCACTGCGTCACTTATCAGCAGTGGCGAAATGAAAGTAATGTTTGCAAAGAGTGCTACTTAATTAGT
ATTTTGATTCTTCAAAACGAAGGCCAGCGAACTTCGGGTGAAAGCTTGTTGACACCCCCTCTGTTTTCATTTCGGCGCCG
TCGTATGTGAGGTGGC--TGTACGGTTACGGCCCGTCGCTCTTGTGACATCCC----CTCTGTTTTCGTCGTATATATGT
TCGTGCCG--------------CGGT------AACAAATGTACGGAATGCAGTGCAGTGCACCCGCAGCTAGCGTACAAA
GCTGCCGATAACGATGACCTACAGCTCT--ATTAGAGACCGGCCGACGGCCGAACAGGACGATCGAGAGGATGACAACGA
ATGGAGCCGCACGCATACGCACCAGCCTGCATGCATG--------CACTGACTCGCAGGCGCGTGCATGGCAGACACGCA
GCACTGGGCGACGACGATGTGTACGAAAGCTACGTG-CTGGACAGCTCATACTTATCCATGCATGCTA------GCAAGC
GAGTATAAAAGGACATGCTGTCCGCTGAGGCTTATC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ACCGC
CGATCCATCGATCACTCGTGTGCATGCTCGTTGGTCACGTTAATTTCATCTTTCCAGATAAA-GATCGAGTTTGTTGCTA
GGTGGATATGGGCTCTCTCATGGCTGGCTGGAGCTCCCATGCGCTCGACGACGACCTCAAAGGTAC---GTC-----CGC
CGTGT--------ACAACCATCCACAATCCATAGTGCATGCAAATTCACGTTGCAAGATTCATAATTAGCCTTGTCTTAT
GG----------CATCCCTCTATGTATGCAGTTCGTTTTATGAGGAACCGGTCGCTGACCAAGGAGGATGTGGAGGCC-T
TCTGGAGGCAGCACAAGAAGCCGGCGCCGGAGGACAACGTTGACGGCGGCGAGACCGTCGTCGCCTCCTCTCCCCGCGTA
CGTAACCGGTCCGCATGC----GTGCATCCGTCGGATTTGCATCGGCCTCCTTAATCAAGCTTGTATCAAATACGTACTT
GATTTTTTT-ACTCTGCTTGCATGTGTTGGTTAATTAGAAGGGGAGCCCGAAGTCGACCCCGCGTCCGTCGACTCTGTCT
CATGTCCGTTCGTCGCCGCCGGTGATGACG------AGTAGCGTGGACGGCGACGGCGACGGCGAGGCTGCCGCTAGCCC
CAGCGCGAGCCGCGACTGGTACGTAACGTACCTTACCTAGTATAG-----------------------------------
------------------------------------------------------------TAGCATGAGCTTCTTGAT--
-------------------------------TTCA-------TACATGCACATATTCATAGCATGCATGGATCCATGGGT
A----CATGTATCGATCACGGACGG---C------TGGTTGTGTGCATGCAGGTGGACGAGGAGCAGCTGGGCGTTCCTC
AACGAGCCGCCGCCGCCGCCGCAGCGCGAGGGAGGAGGCGTTGGGCAAGGCGCCGCAGCCGCCGTCTGATCATCATCTCT
TTAATT-----------------------------ACTTTGCTAA--GTTAGCTTTGTACTATCCCTGTAAATACGTACA
GTAC---------------------------------------------------TACGTACCAGCCGTGTA--------
-------------CTTGGAGTGGTGGCTTTGC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TAATGTTTGATCTCTGTAGCATGTGG----
CATGTCACTTTCTGTATTGGCGCTCATGTAACCTTGGAGATATACTATGTGTACACGTCACTTTCTGTATTTGGCATCTC
AGATAGTACCAAAAACAAAATTCGGGACTAAAACAAGATGCA--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>chr4A_1
AAACATGTGCGTATGTATTAG--TTTTTTTATCGCTCGGAGTAGTGTGAGCACTTGAAAAAAA-AGATAAGAGTGTGTAG
CACTTGAAGAATAAAAATAAAACGTATAGTGCTTCCGCCAAATTCTAGGAGTGTTCCGCCTT-AAAAAAACTAGTGCCTT
CCCCATTACGAGCACTAGGCTAAAATGCCTTCCGCCATTTTGAGCGTTCTAC----TTTTTTTTTCCATAAAAATCATCA
--ACATCTTTTAACATATAATCTAGTTTTGAAGATCTCAGCGCTAGAAATATAATGATGAAAACAATTAACAATTTGGAC
GTCTTGTTCAAGGGATG---------------------AAAGATAAATCTATGAAAAAGA--AAGAAAAACCTAACGGGT
TGTGATAAATGATGCAGTGCATCACTTATCAGCACAGGAGAAATGAGAGTAAATTTACA-------AAGAGTAC-----T
CTTTTCGTTGTTCAAAACGAAGGCCAACGAACTTCGGGTGAAAGCTTGT-GACACCCCCTCTGTTTTCATTTCGGCGCCG
TCGTATGTGAGGTGGATATGTACGGTTACAGCCCGCCGCACTTGTGACATCGATCCGCTCTATTTTCATCG----TATGT
TCGTGTCG--------------TCGT------AATGAATGTACGGAATGCAGTGCAGTGCACTCGCAGCTAGCGTACAAA
GCTGCCGATAACGATGACCTAGTGCTCT--ACTAGAGATCGACCGACGGACATGACGATCGATCGAGAGGTTGACGACAA
AAGGAGCCGCACGCACACGCACCAGCGAGCATGCATG--------GACTGACTCGCAGGTGCGTGCATGGCAGACACGCA
GCACTGGGCGACGACGATATGTACGGAAGCTACGTG-CTGGACAGCTCATACTTATCCACGCATGCTA------GCAAGC
GGGTATAAAATGGCATGCTGTCCGCTGAGGCTTATC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ACCAC
CGATCCATCGATCTT----------------------------TTTCATCTTTCCAGATAAA-GATCGAGTTT---GCTA
GGTCGATATGGGCTCTCTCATGGCTGGATGGAGCTCCCATGCGCTCGACGACGACCTCAAAGGTAC---GTC-----CGC
CGTGTATCTACGTACAACCATCCACCATCGATAGTGCATGCAACTTCACGTTGCAAGATTCCTAATTAGCCTTGTAGTAT
AATGGTATCTATCATCATTCTATCTATGCAGCTCGTTTCATGAGAAATCGTTCGCTGACCAAGGACGAGGTGGAGGCC-T
TCTGGAGGCAGCACAAGAAGCCGGCGCCGGAGGACAACGTCGACGGCGGCGAGACCGTCGTCGCCTCCTCTCCCCGCGTA
CGTAACCGGTTCCCATGC----GTGCGTCCGTCGGATTTGCATCGGGTTCCTTAAGCAAGCTTGTCAAATGCGTATACTT
GATTTTTTA-ACTCTGCTTGCATGTGTTGGTTAATTAGAAGGGGAGCCCGAGGTTGACCACGCGTCCGCCGACTCTATCT
CATGTCCGTTCGTCGCCGCCGGTGATGACG------AGTAGCGTGGACGGCGACGGCGACGGCGAGGCTGCCGCTAGCCC
CAGCGCCAGCCGCGACTGGTACGTA---TCCCTTA--TAGCATAG-----------------------------------
------------------------------------------------------------TAGCATGAGCTTCTTGAGTT
TTTTTTTTGTTTGCGAAATGAGCTTCTTGAGTTCA-------TACATGAACATATTCATAGCATGCATGGATCCATGTTT
A----CATGTATCGATCACGTACGG---CTGGTTGTGGCTGCGTGCATGCAGGTGGACGAGGAGCAGCTGGGCGTTCCTC
AATGA---GCCACCTCCGCAGCAGCGCGAAGGAGGAGGCGTTGGGCAAGGCGCCGCGGCCGCCGTCTGATCATCATCTCT
TTAATT-----------------------------ACTTTGCTATAAGCTGGCTTTG---TATCCCTGTAAATAAGTACT
CTCTTAAACTATTAAATCACTATCTAAACACTCTTTTATTAGTTTACGGAGAGAGTACGTACCAGCCATGTA--------
-------------ATTGGAGTGGTGGTTTTGC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TAATGTTTGATTTCTATACGATGTGGAGTG
CATGTCACCTTTTGTATTATCACTCATGTAACCTTGGAGATATACTATGTGTATATGTCACTTTCTGCA-TTGGCATCTC
AGATGTTACAAAAAACGAAAATTC--------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>chr5D_613
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GT
TCGTGTCG--------------CCGCGCAACGAATGTACGCATGCGGTGCAGGGCAGTGCACGCGCAGCTAGCGTCCAGA
GCTGCCGACAACGATGACCCTGCAGCATAAACTAGAGACCGACGGACGGCTGAACAGGACGATGGAGAGGATGACGACGA
AAGGAGCCGCACGCATACGCACCAGC----ACGCACGCACG----CCCTGACTCGCAGGCGCGTGCATGGCAGACACGCA
GCACTGGGA-----------------AAGCTCCCTGCTTGGACAGCTCAGGCTTATCCATGCATGCTAATGCTAGCAAGC
GAGTATAAAATGACCTGCAGAGTACTGAGGCTTCCTTATCACAAGTACTAGTATTCACAACCGTGCAACCGACGGATTTT
CCAGGACTTACGGATGGACATGCGCACCTTCGTGCAACGACTGAAGGACGAAATCACTATGTGAAACATGACAGGAGCTG
GAATTCCTTTTGACCCGGGTTGAGGACCCTTTTGTGCATCTTTTTTCCTTTTAATGGCATCGTTTCTTCGATGTCTTTGC
CTTTTTCGGCGCTGCTGTTACTCTTTCCCCATGATCAATGAATTTGGTAGAACAACTACCAACATTAAAAAAAAAACAAC
CGATCGATCACT---TCGTGTGCATGCTCGTCGACCACG----------CTTCCACGCTAGCAGGTCGAGTTGCTAG--A
GGTCGATATGGGC-----------------------------GCTCGACGACCGCCACAAACGTGTACACTATCTATCGC
CGTGT--------GCAACCGTCCACCATCATCGACGGTGCGAGAGCAGCTCGTCAA-----ATAATTAGCC--CTGATAG
TA----------CATACATGCGTCTATGCAGTTCGTTTCATGAGGAACCGGTCGCTGACCAAGGAGGACGTGGAGGCCAT
TTTGGAGGCAGCACAAGAAGCCGGCGCCCGAGGACAATGTTATCGGCGGCCTGACCGTCGTCACCTCGCCGCTGT-----
--------------------------------------------------------------------------------
------------------------------------------------CGAGGTCGACCCCGCGTCCGTCGACTCTGTCT
CAGGTCCGTTCGTCGCCTCCGGCGATGACGGA------------------------------------------TAGCCC
CAGCACAAGCCGCGACTGGTACATA---TACCTTAGC-------------------------------------------
--------------------------------------------------------------------------------
-----------------ATGAGCTGCTTGAGTACA-------TATTTGTAACATG---CATCATGCATGGATGCATGTGT
A----CGTGCATCGATGACGTACGTACCC------TGGTTGTGTGCATGCAGGTGGACGAGGAGCAGCTGGGCGTTCCTC
AACGAACCGCCGCCGCCGCAGCGCCGCGAGGGAGCAGGCGTTGGGCAAGGCGCCGCCGCCGCCGACTGATCGTCAC--CT
TTAGCT-----------------------------AGTTTGCTCG--GCTAGCTTTA---TAACCATGTAAATACGTACG
TAC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>SNPs
---------------------S----------S------------------------------S----------------
------------------------------------S-------------------------S-S-S-------------
------------------------------S-------------------------S---------S-S----SSSS-S-
---------------------------------S-----S----------------------------------------
---------S------SSSSSSSSSSSSSSSSSSSS------------------------SS------------SS----
-------------S-------------S-------------------------S---S-----SSS----S---------
--------------------------S------------------------------S----------------------
--------------------------------------------------------------------------------
--------SSSSSSSSSSSSSS---------------------------------S------------------------
--------------------------------------------------------------------------------
------------S-------S-----S-----------------------------------------------------
----------------------S---S----------------------------------S-----S------S-S---
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-----------------S-------S-SS-------------------------------
S-----------------------------------------------------------------SSS-----------
--------------------------------------------S----------------------S-S----------
--------------------------------------------------------------------------------
---------------------------------S-----------------------------------------S----
---------------------S-------------------------------S--------------------------
---------S----------------------------------------------------------------------
-----------------------------S-------S------------------------------------------
-------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S
------S------------------S---------SSSSSSS--------------------------------------
--------------------------------------------------------------------------------
---------------------S--------------------S-------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-SS--S-
SSS-SSSSSSS-S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
------------------------S-----------------SSS-SS-S-SS--S-SSSSSS-S-SSSS---SSS--SS
SSSSSSSSSSSSSSSSS-SSSSSS-S-SSSS-SSS-SSSSS-S-SSSS-SSSS-S-SSS--SSSSSSSSSS-SSSSS-SS
-SS-S-SSSS-SS-SSSSS--SS-SSSSSSSSS--SSSSSS-S-SSSSSSSSS-S-SS-----SSSSSSSSSSS-SSSSS
-SS-SSSSS-SSSS-SSSS-SSS--S-SSSSSSSSSSSS-S--S--SSSS-SSSSSSSSSSSSSS-SSS-SSS-S-S-SS
SS--S-SSS-SS-S--S--SSSS-SS-SS--S--SSSSSSS-S-S-SSSSS--SSSSSSSSSSSSSSSS-S-S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S---------------------------------S-S-------------S-S-SSS----SS-S--
SSSSS------------------------------------S--------------------------------------
-----------------S-----S-----------------------------------S----S------SS----SS-
--S----------------S---------------------------S-S------------------------------
--------------------------------------S-------------S-------------SS
>forward_654
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GTATGT
TCGTGCCGCGGTAA------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>reverse_3149
--------------------------------------------------------------------------------
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----------------------------TGCGTCGACTCTGTCTCATG--------------------------------
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--------------------------------------------------------------------
