>input_sequence_66042
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ATGC-CCTATATAAAGCAGTGGCACC
CGGCTCTGTTCTTCCCCACAACACACACAGCCAGCACCTGCAGCTGCGTCCCACTGCAAATCCTCCAACTCCACTTCCTT
CTCGTGGCGTCTCTTTCCGGCCGGCAT---------CCCCTAGCCCAGCCTACCTCGCTCCAATTACACCAGCCGTCACC
TCCACCGTG----TCTCCATTTCGCCATGGCTAACTCAATGCTCGACTCGCCGCCGCAGCTCCCTGCCGCCGGCCCTTGG
GGCTCTCTGTTCGCCGTCCAGGAACCCGCGAAGCCTCGGCGTGTGTCGGTGGCGCTACCGTTCGCTCCCAAGAAGATGCC
GGCGTACCGGTACGGCATGAAGCGGAACCTGGAGATGTGCACCGAGGCGCTCGGGTGCGAGACCGGTGGCGTCGACCCAG
CCGCTGACGACGCCGA---CGAGGGCGTGGAGCGCAAGAGGAAAT------ACAGGGAGGAGGAGGAGGAGGAGACCAAG
GTGGAGCGGACGGAGCGGAGGGCGCGCGTGCTGCCACCGCCGCTGACGACGCTGGCGGCTGGCGCGACCCGCATGCGCAT
GGTCCACGAGCGACGCGGCGGGCGGCTAGAGGTGTACGCCGTGCGGGCCTCCGGAATGGAGGCCGAGCGGAGCGGCGGCC
GTCTTCGGCTCCGCCTCATGCCCTGCGCCGGCTGCAATGCCGCCGCCGTGTGCAGCAGCCAACAAGAACCGCAAGAAGCA
GAGGAAGATGAGACAGAGGAGGTTGATCAGCAGCGGCAGCAGCA------GTGCGTGGTCCCCAAGTACGTGCGCCGCGA
GCGGTGCCTGAAGGTGGAGAGTGGCGCCACGGCGGCGAGGTGCAGCATCAAATGGGAGCAGGAGCAGGCTGCCGCGTTCT
GGGTGGCAACCACCTGA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>chr1D_1_TraesCS1D01G243900
TCTTATAGGCAACCTTATACCTAAGCTTAAGCCTCCTTTGGTTTGGAGGAATTTCAAAGGATATATATAGGATAGGATTC
TTGTAGAAATTTTTCCTTTAAAGCCCTTTGGTTCATAGGAATGGATTCCTATTCCTACATAGGATTGGTTCCTATCCTCC
ACATTTTAAAGGAAAATAAACATGAGCATAGACTCAATGAAAAAATTCCTATGATGTGAACCAAATGACATCTCTTTTCC
TAATCATACTCATAGGATTTGAATATATGTCATCTCATTTCCTACAAGTTTCCTATTCCTGTGATAATCCTATCATATGA
ACCAAAGAAAGCCTTATTGTATGAGTGCCTATAAGTGATGGTTATATATGACATGGCAATATCATATAGCCATCAGTTGG
CTATAGTATTAACCATGCTCTGAACTCTCTCTTCTGACATATGTCATTGGTCCACATACGTGTGTGATAGATGCTCCTGA
TCTGTGGTATGTGATTTGCCATGTCCGTAATCTTGAGATGATGCTAATTTGGATGGAGTTACTGTCACTTTACATGTATT
TTAATTGCCATATTTAATCAACTTCCTCCATCCCAAAATTAAGTGACTCAATTTTATATTTCCTCTGTAAATAAATATAA
GTGTTTATAGATCACTAAAGTGGTGACCTAAATGCTCTTATATTGGGAGAGAGTACTAACATTATATCTATTTAGTAGGA
TTAAGCTAAAGCTTTCTTATCAAGCATTACGCATGCCCCTTAACCACACAGACAAAGCATCGGTCGTCAGCCTAATTACA
AAGCACGGTGAGGGCGACCTGCCCTTACAGGCCAGAGTGGCACGCAGCAGCAGCCACTA-------------CATCCCTG
GGAATGCTC-TTTCCTTCTTTTGTTTTCTTCCATGTATTGCGAAGAGAATGGAATCGGAGTCGGAGAGCCATGTATATGC
CCATTACCATCAGCGGAATATGTTCCAACCGACAACTACCATCTTCCCCGGCCTATGC-CCTATATAAAGCAGTGGCACC
CGGCTCTGTTCTTCCCCACAACACACACAGCCAGCACCTGCAGCTGCGTCCCACTGCAAATCCTCCAACTCCACTTCCTT
CTCGTGGCGTCTCTTTCCGGCCGGCAT---------CCCCTAGCCCAGCCTACCTCGCTCCAATTACACCAGCCGTCACC
TCCACCGTG----TCTCCATTTCGCCATGGCTAACTCAATGCTCGACTCGCCGCCGCAGCTCCCTGCCGCCGGCCCTTGG
GGCTCTCTGTTCGCCGTCCAGGAACCCGCGAAGCCTCGGCGTGTGTCGGTGGCGCTACCGTTCGCTCCCAAGAAGATGCC
GGCGTACCGGTACGGCATGAAGCGGAACCTGGAGATGTGCACCGAGGCGCTCGGGTGCGAGACCGGTGGCGTCGACCCAG
CCGCTGACGACGCCGA---CGAGGGCGTGGAGCGCAAGAGGAAAT------ACAGGGAGGAGGAGGAGGAGGAGACCAAG
GTGGAGCGGACGGAGCGGAGGGCGCGCGTGCTGCCACCGCCGCTGACGACGCTGGCGGCTGGCGCGACCCGCATGCGCAT
GGTCCACGAGCGACGCGGCGGGCGGCTAGAGGTGTACGCCGTGCGGGCCTCCGGAATGGAGGCCGAGCGGAGCGGCGGCC
GTCTTCGGCTCCGCCTCATGCCCTGCGCCGGCTGCAATGCCGCCGCCGTGTGCAGCAGCCAACAAGAACCGCAAGAAGCA
GAGGAAGATGAGACAGAGGAGGTTGATCAGCAGCGGCAGCAGCA------GTGCGTGGTCCCCAAGTACGTGCGCCGCGA
GCGGTGCCTGAAGGTGGAGAGTGGCGCCACGGCGGCGAGGTGCAGCATCAAATGGGAGCAGGAGCAGGCTGCCGCGTTCT
GGGTGGCAACCACCTGAGCTACAACGGATTTTTTTTTGACACGTCTCATGGCTGAATCAACTAAGGCTTCTTCTTCCATC
TCCAGATCTGCACTTAGAACGGATGAGTAGGACTGGGAGATGCTAGTGATGATCTCGAATACTTTCGGTCTTCGATTTCT
TTCGGTTACCTCTCACCTTTAGTTTCCTTCTTGCCTACTACCTTCGACCAAGCTCGCCTGATCAAACTGTTCTTATTATG
TCGCTGCTGATTGCAGTGGCACACTTTGTAC--ATAGAAGCAACAATATTTGGTTGGTGAGTATGGTTTGAAAGAGTATA
AAAATGTTCGAGGTCCTTGATCTCTGTTGTGAATGAGCATGTCTGTTTTCTAACTTCAGTAAACTTATCTTTAGGAGCTC
TTCTAAGATGCTCCAAATTAT-AAGAATGATTCATTTTTAACAATCTAACAGTCAATAGTGTCTCTTAGAGCAACTCTAA
CAGAGTCCCATCTTATGT-------GCCACAATGCATATGGAG-GTGCTCCATTTGCATTTGGAGGCTCCGCAGGCAGCA
CGCAAACTCACAGTCGTCATGTATTCACCTTCATAATTTATATA---------TTTTTCCCACGTCAAATACTTCGATTC
CTTCCAAATGTAAATGTTTAGCACGTTAAGCAAACATGCACGTAATTTTGGACAAGTTGCATGAACAAAAACATTTAAAC
CGGCACAAA--TATGCAAGTCACATGTTGCCGCTGAGTGCACCATCCCATTCTTCTCCGGCGTGTGCATTGTGTCATCC-
---------TTCGAGGTTCGTGGAACGTATGATTGCATCTCACGCCTTCCCCCTAAAATCCCGCACTACTAAATCCATTT
GGCTCGGATCCAACATGATGAGCCATTTATGCTCGACTATGTGTTGTTCTCTCATTCGATCTTCCTTAAGTTAGAGCCTA
CGTGCCTCCATCTTCTGATGATTTGGGAGTCTACATGCCACCATCTCGCCCTCTTCTCTTGATTCTCCTTCTCCTTCTCT
AGCTTTGCT
>chr1B_332
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CCTTGTTGTAT--GTGGCTATAAGTGGTGGTTATATCTGACATAGCAATATTATATAGCCAGCAGTTGG
CTATACTATTAACCATGCTCTGAACTCTCTCTTCTGACATATGTCATTGGTCCACATACGCGTGTGCTAGATGCTCCTGA
TCTGTCGTATGTGATTTGCCATGTCCGTAATCTTGTGATGATGCTAATTTGGATGAAGTTTAT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GCATGCCCCTTAACCACACAGACAAAGCATCGATCGTCAGCCTAATTACA
AAGCACGGTGAGAGGGACCTGCCCTTACAGGCCAGAGTGGCACGCAGCAGCAGCCACTACTCCACTCCACTCCATCCCTG
GGAATGCTC-TTTCCTTCTTTTGTTTTCTTCCATGTATTGCGATGAGAATGGAATCGGAGTCGGAGAGCCATGTATATGC
CCATTACCATCAGTAGAATATGTTCCAACCGACAACTGCCATCTTCCCCGGCCTATGCGCCTATATAAACCAGTGGCACC
CGGCTCTGTTCTTCCCCACGACACACACAGACAGCACCTGCAGCTGCGTCCCACCGCAAATCCTCCAACTCCACTTCCTT
CTCGTGGCGTGTCTTTCCGGCCGGCAT---------CCCCTAGCCCAGCCTACCTCGCTCCAATTACATCAG--------
----CCGTG----TCTCCATTTGACCATGGCTAACTCGCTGCTCGACTCGCCGCCGCAGTTCCCTGCCGCTGGCCCTTGG
GGCTCTCTGTTCGCCGTCCAGGAACCCGGGAAGCCTCGGCGTGTGTCGGTGGCGCTACCGTTCGCTCCCAAGAAGATGCC
AGCGTACCGGTACGGCATGAAGCGGAACCTGGAGATGTGCACCGAGGCGCTCGGGTGCGAGACCGGTGGCGTCGACCCAG
CCGCTGACGACGCCGA---CGAGGGCGTGGAGCGGAAGAGGAAAT------ACAGA---GAGGAGGAGGAGGAGATCAAG
GTGGAGCGAACGGAGCGGAGGGCGCGCGTGCTGCCGCCGCCGCTGACGACGCTCGCTGCTGGCGCGACCCGCATGCGCAT
GGTCCACGAGCGACGCGGCGGGCGGCTGGAGGTGTACGCGGTACGGGCCTCCGGAATGGAGGCCGAGCGGAGCGGCGGGC
GTCTTCGGCTCCGCCTCCTGCCCTGCGCCGGCTGCAATGCCGCCGCAGCGTGCAGCAGCCAACAAGAACCGCAAGAAGCA
GAGGAAGATGAGACAGAGGAGGTTGATCAGCAGCGGCAGGAGGA------GTGCGTGGTCCCCAAGTACGTGCGCCGCGA
GCGGTGCCTGAAGGTAGAGAGTGGCGCCACGGCGGCGAGGTGCAGCATCAAATGGGAGCAGGAGCAGACTGCCGCCTTCT
GGGTGGCCACCACCTGAACTACAACGGATTTTTT---GACACGTCTCATGGCTGAATCAACTAAGCCTTCTTCTTCCATC
TTCAGATCTGCACTTAGAACGGAT-AGTAGGACTGGGAGATGCTAGTGATGATCTCGAATACTTTCGGTCTTCGATTTCT
TTCGGTTACCTCTCATCTTTAGTTTCCTTCCTGCCTACTATCTTCGACCAAGCCCGCCTGATCAAACTGTTCTTATTATG
TCGCTGCTGATTGCAGTGGCACACTTTGTACATATAGAAGCAACAATATTTGGTTGGTGAGTATGGTTTGAAAGAGTATA
AAAATGTTC-AGGTCCCTGATTTCTGTCGTGAATGAGCATGTCTTTTTTCTAACTTCAGTAAACTTATTTTTAGGAGCTC
TTCTAAGATGCTCCAAATGATTAAGAGTA---CATTTTTAACACTCTAACAGCTAATGGTGCCTCTTAAAGCAACTCTAG
TAAAGTCCCCGTCATATGTGTGATCGCCGCAATGCACATAAAGCGGGCTCCATTTGCATTTGGAGGCTACGCAGGCAGCA
CATAAACTCAAAGTCGTCATATCTTCACCTTCATGATTTATTTG---------TTTTTTCCACGTCAAACACTTTGATTC
CCTCCAAAAGTAAATGTTTAGCATGTCAAGCAAATATGCACGTCGTTTTTGACAGGTTGCATGAACAAAAACATTTAAAC
CGGCACAAA--TATGCAAGTCACATGTTGGCCCCGAGTGCACCATCC-ATCTTTCTTCGGCGTGTGCATTGTGCTATCCT
TTGCTATCCTTCGAGGTTCGTGGAACGTATGATCACATCTCACGCCTTCTCCCAATATTTCCGCACCACTGAATTCATTT
GGCTCGGATCCAACATGATGATCCATCTTTGCTCGATTATGTGTTGTTCCCTCATTCGATCTTTCTTAAGTTGGAGCCTA
CGCGCCTCCATCTTCTGCTGATTTTGGAGCCTACATACCACCATCTC---------------------------------
---------
>chr1B_706
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATCTATGTAGTAGGA
TTAAGCTAAAACTTTCTTATCAAGCATTACGCATGCCCCTTAACCACACAGACAAAGCATCGATCGTCAGTCTAATTGCA
AAGCACGATGAGGGCGACCTGCCCTTGCAGGCCAGAGTGGCACGCAGCAGCAGCCACTACTCCACTCCA-----TCCCTA
GGAATGCCCTTTTCCTTCTTTTGTTTTCTTCCATGTATTGCGACGAGAATGGAATCGGAGTCGGAGAGCCATGTATATGC
CCATTACCATCAGCGGAATATGTTCCAACCGACAACTACCATCTTCCCCGGCCTATGC-CCTATATAAACCAGTGGCACC
CGGCTCTGTTCTTCCCCACA--ACACACAGCCAGCACCTGCAGCTGCGTCTCACTGCAAATCCTCCAACTCCACTTCCTT
CTTGTGGCGTCTCTTTCCGGCCGGCAT---------C---------AGCCTACATCGCTCCAATTACACCCACCATCACC
TCC-CCGTG----TGTCCATTTCGCCATGGCTAACTCGCTGCTCGACTCGCCGCCGCAGCTCCCTGCCGCCGGCCCTTGG
GGCTCTCTGTTCGCCGTCCAGGAACCCGGGAAGCCTCGGCGTGTGTCGGTGGCGCTACCGTTCGCTCCCAAGAAGATGCC
AGCGTACCGGTACGGCATGAAGCGGAACCTGGAGATGTGCACCGAGGCGCTCGGGTGCGAGACCGGTGGGGTCGACCCAT
CCGCTGACGACGCCGA---CGAGGGCGTGGAGCGGAAGAGGAAAT------ACAGA---GAGGAGGAGGAGGAGATCAAG
GTGGAGCGGACGGAGCCGAGGGCGCGCGTGCTGCCGCCGCCGCTGACGACGCTCGCGGCTGGCGCGACCCGCATGCGCAT
GGTCCACGAGCGACGCGGCGGGCGGCTGGAGGTGTACGCGGTCCGAGCCTCCGGGATGGAGGCCGAGCGGAGCGGCGGGC
GTCTCCGCCTCCGCCTCCGGCTCTGCGCCGGCTGCAATGCCGCTGCAGCGTGCAGCAGCCAACAAGAAGCGCAAGAAGCA
GAGGAAGATGAGACAGAGGAGGTAG---AGCAGCAGCAGCAGGA------GTGCGTGGCCCCCAAGTACGTGCGCCGCGA
GCGGTGCCTGAAGGTGGAGAGTGGCGCCACGGCGGCGAGGTGCAGCATCAAATGGGAGCAGGAGCAGGCTGCCGCCTTCT
GGGTGGCCACCACCTGAACTACAACGGATTTTTT---GACACATCTCATGGCTGAATCAACGAAGCCTTCTTCTTCCATC
TCCAGCTCTGCACTTAGAACGGATGAGTAGGACTGGGAGATGCTAGTGATGATCTCGAATACTTTCGGTCTTCGATTTCT
TTCGGTTACCTCTCATCTTCAGTTTCCTTCCTGCCTTCTATCTTCGACCAAGCTCGCCTGATCAAACTGTTCTTATTATG
TCGCTGCTGATTGCAGTGGCACACTTTGTAC--ATAGAAGTAGCAATATTTGGTCGGTGAGTT--GTTTGAAAGAGTATT
AAAATGTGC-AGGCCCTTGATTTCTGTCGTGAATGAACATGTCTGTTTTCTAACTTCAGTAAACTTATCTCTAGGAGCTC
TTCTAAGATACTCCAAATTATTAAGAGTAGTTCAATTTTAACAATCTAACGGCTAATAGTGTCTCTTAGAGCAACTCTAG
CAAAGT-------ATATATGCGATCGCCACACTGCATATGAAGTGTGCTTCATTTGCATTTGCAGGTTACGCAGGCAGCA
CACAAGCTCGG---------ATCTTCACCTTCATAAA-------------TATTTTTTTTCACGTCAAACACTTACATTC
CCTCAAGACGTAAACGTTTAGCACATCAAGAAAACATGCACGTAGTTTTCGACAAGTTGCATGAACAAAAACATTTAAAC
CAGAACACA--TGTACAAGTCACATGTTGTCGTCGTGTGCACCATCCCATCCTTCTCCCACGTGTGCATTGTGCCATCT-
---------TTCAAGGTTC-TGAAACATATGATCATATCTCATGCCTTCTTCCGAAAATCTCGCACCACTGAATCCATTT
GGATCGGATCCAACATGATGAGCCATTTATGCTCGATTATGTGTTTTTCTCTCAGTCGATTCTCCTTAAGTTGGAGCCTA
CATGCCTCCATCTTCTGCTGATTTTTGAGCCTACATACCACCATCTC---------------------------------
---------
>chr1A_713
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TAATAAGA
TTAAGCTAAAACTGTCTTATCAAGCATTACGCATGCCCCTTAACCACACAGACAAAGCATCGATCGTCAGCCTAATTGCA
AAGCACGGTGAGGGCGACCTGCCCTTACGGGCCAGGGTGGCACGCAGCAGCAGCCACTACT-------ACTCCATCCCTG
GGAATGCTC-TTTCCTTCTTTTGTTTTCTTCCATGTATTGCGAAGAGAATGGAATCGGAGCCGGAGAGCCATGTGTATGC
CCATTACCATCAGCGGAATATGTTCCAACCGACAACTACCATCTTCCCCGGCCTCTGC-CCTATATAAACCAGTGGCACC
T-GCTCTCTTCTTCCCCACAACACACACAGCCAGCACCTGCACCTGCGTCCCACTGCAAATCCTCCAACTCCACTTCCTT
CTCGTGGCGTCTCTTTCCGGCCGGCGTCCCCTAGCCC---------AGCCTACCTCGCTCCAATCACACCAACAGTCACC
TCCACCGTG----TCTCCATTTCGCCCTGGCTAACTCGCTGCTCGACTCGCCGCCGCAGCTCCCTGCCGCCGGCCCTTGG
GGCTCTCTGTTCGCCGTCCAGGAGCCCGCGAAGCCTCGGCGTGTGTCGCTGGCGCTGCCGTTCGCTCCCAAGAAGATGCC
GACGTACCGGTACGGCATGAAGCGGAACCTGGAGATCTGCACCGAGGCGCTCGGGTGCGAGACCGGTGGCGTCGACCCAG
CCGCGGACGACGGCCCCTTCGAGGGCGTGGAGCGGAAGAGGAAAT------ACAGGGAGGAGGAGGAGGAGGAGACCAAG
GTGGAGCCGACGGAGCCGAGGGCGCGCGTGCTGCCGCCGCCGCTGACGACGCTGGCGGCTGGCGCGACCCGCATGCGCAT
GGTCCACGAGCGGCGCGGCGGGCGGCTGGAGGTGTACGCCGTGCGGACCTCCGGAATGGAGGCCGAGCGGAGCGGCGGGC
GTCTTCGGCTCCGCCTCCTGCCCTGCGCCGGCTGCAATGCCGCCGCCGCGTGCAGCAGCCAACAAGAAGCGCAAGAAGCA
GAGGAAGATGAGGCAGAGGAGGTCGATCAGCAGCAGCAGCAGCAGCAGGCGTGCGTGGTCCCCAAGTACGTGCGCCGCGA
GCGGTGCCTGAAGGTGGAGAGTGGCGCCACGGCGGCGAGGTGCAGCATCAAATGGGAGCAGGAGCAGGCTGCCGCCTTCT
GGGTGGCCACCACCTGAACTACAA---------------------------------------AGCCTTCTTCTTCCATC
TCCAGATCTGCACTTAGAACGGA--------------------------TGATCTCGAATACTTTCGGTCTTCGATTTCT
TTCGGTTACCTCTCATCTTTAGTTTCCTTCCTGCCTACTACCTTCGACCAAGCTCGCCTGATCAAACTGTTCTTATTATG
TCGCTGCTGATTGAAGTAGCACACTTTGTAC--ATAGAAGCAGCAATATTTGGTTGGTGAGTATGGTTTGAAAGAGTATA
GAAATGTTC-AGGTCCTTGATTTCTGTCGTGAATGAGCATGTCTGTTTTCTAACTTCAGTAAACTTATCTTTAGGAGCTC
TTCTAAGATGCTCCAAATTATTAAGAGTAGTTCATTTTTAACAAACTAATGGCTAATAGTGTCTCTTGGGGCAACTCTAG
CAGAGTCCCCATCGTATGTGCGATCGCCACAATGCATATGAAGCGTGCTCCATTTGCATTTGGAGTCTACGCAGGCGGCA
CGCAAACTCAGAGTCGTCATATCTTCACCTTCAGTATTTATTTATTTATTTATTTATTTTCAAGCCAAACACTTTGATTC
CCTCCAAATGTAAGTGTTTAGCACGCCAAGCAAATATGCACATAGTTTTTGACAAGTTTCATGA--AAAAACATTTAAAC
CGGCACAAAAATATGCAAGTCACATGTTGCCCCCGAGTGCACCATCCCATCCTTCTC---CGGGTGTGCTGTGCCATTG-
---------ACTGAGGTTCATGGAGCGTATGATCACATCTCACGCCTTCCCTCAAAAATCCCGCACCACTGAATCAATTT
GGCTCGGATCCAACATGATGAGCCACTTATGCTTGACTATGTGTTGTTCCCTCATTTGATCTTCCTTAAGTTGGAGCCTA
CGCGCCTCCATCTTCTGCTGATTTTGGAGCCTACATGCCACCATCTC---------------------------------
---------
>chr1A_713
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TAGTAGGA
TTAAGCTAAAATTGTCTTATCAAGCATTACGCATGCCCCTTAACCACACAGACAAAGCATCGATCGTCAGCCTAATTGCA
AAGCACGGTGAGGGCGACCTGCCCTCACAGGCCAGAGTGGCACGCAGCAGCAGCCACTACTCCACTCCA-----TCCATC
-------------CCTTCTTTTGTTTTCTTCCATGTATTGCGATGAGAGTGGAATCGGAGTCGGAGAGCCATGTATATGC
CCATTACCATCAGCGGAATATGTTCCAACCGACAACTACCTTCTTTCCCGGCCTCTGC-CCTATATAAACCAGTGGCACC
-GGCCCTCTTCTTCCCCACAACACACACAGCCAGCACCTGCAGCTGCGTCCCACTGCAAATCCTCCAACTCCACTTCCTT
CTTGTGGCGTCTCTCTCCGGCCGGCAT---------C---------AGCCTACCTCGCTCCAATTACACCAACCGTCACC
CCCACCGTGTCTCTCTCCATTTCGCCATGCCTAACTCGCTGCTCGACTCGCCGCCGCAGCTCCCTGCCGCCGGCCCTTGG
GGCTCTCTGTTCGCCGTTCAGGAACCCGGGAAGCCTCGGCGTGTGTCGGTGGCGCTACCGTTCGCTCCCAGGAAGATGCC
GGCGTACCGGTACGGCATGAAGCGGAACCTGGAGATGTGCACCGAGGCGCTCGGGTGCGAGACCGGTGGCGTCGACCCAG
CCGCTGACGACGCCGA---CGAGGGCGTGGAGCGGAAGAGGAAAT------ACAGA---------GAGGAGGAGACCAAG
GTGGAGCCGACAGAGCGGAGGGCGCGCGTGCTGCCGCCGCCGCTGACGACGCTGGCGGCTGGCGCGACCCGCATGCGCAT
GGTCCACGAGCGACGCAGCGGGAGGCTGGAGGTGTACGCCGTGCGGGCCTCCGGAATGGAGGCCGAGCGGAGCGGCGGGC
GTCTTCGGCTCCGCCTCCTGCCCTGCGCCGGCTGCAATGCCGCCGCCGTGTGCAGCAGCCAACAAGAAGCGCAAGAAGCA
GAGGAAGATGAGGCAGAGGAGGTCGATCAGCAGCAGCG---GCAGCAGGAGTGTGTGGTCCCAAAGTACGTGCGCCGCGA
GCGGTGCCTGAAGGTGGAGAGTGGCGCCACGGCGGCGAGGTGCAGCATCAAATGGGAGCAGGAGCAGGCTGCCGCCTTCT
GGGTGGCCACCACCTGAACTACAA---------------------------------------AGCCTTCTTCTTCCATC
TCCAGATCTGCACTTAGAACGGA--------------------------TGATCTCGAATACTTTCGGTCTTCGATTTCT
TTCGGTTACCTCTCATCTTTAGTTTCCTTCCTGCCTACTACCTTCGACCAAGCTCGCCTGATCAAACTGTTCTTATTATG
TCGCTGCTGATTGAAGTAGCACACTTTGTAC--ATAGAAGCAGCAATATTTGGTTGGTGAGTATGGTTTGAAAGAGTATA
GAAATGTTC-AGGTCCTTGATTTCTGTCGTGAATGAGCATGTCTGTTTTCTAACTTCAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>chr1B_1186
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TCTGCATTTCGCCATGACTAGCACCGTGCTCGACTCACCACCGCAACTCCCGGCCGCCGGTGCCTGG
GGCTCTCTGTACGGTGTACAAGAACCTTTGAAATGCCAGCGTGTC---CCCGTGGTACCGGCAGCTTCCAAGAAGAAGCC
A---GC---GTACGGGATCAAGAGGAACCTAGAGATGTGCACCGAGGCGCTCGGGTGCGAGACTGGTGGCGTCGACACAG
CCGCCGACGATGTCCA---CGTGGGCATGGCGAGGAAGAGGCATGCCTGGGACAGGGAGCAAGAGGAGGAGGAGACGAAA
GCGGAGCCGATGGTGCGGAGAGTGCGCGTGCTGCCCCCGCCGCTGACGACGCCGGCGGCCGGCGCGCCCCGCGTGCGCAT
GGTCCACGCGCGGCGCGATGGACGGCTGGAAGTGTACGCGGTGCGGTCATCCGGGGTGGAGGCCGAGCGGAGCGGCGGGC
GTCTCCGCCTCCGCTTCCTCCCCTGCGCCGCCTGCAAGTGCAATGCCGCCAAGTGCAGCCAACAAGAATCGCAGGAAGGA
GAGGAACACGAGGC---------TGATCAGCGTCAGCAGCCGGAGGACGCACACGTCGTCGCAAAGTACGCGCGCGGTGG
GCGGTGCGTGGAGGAAGAAGGTGGCGCGACGGCGGCAAGGCGCGGCGGGAAATGGGAGCCAGAGCAGGCGGCCACGTTCT
GGGTGGCCATCACCTGAACTGAAACGGATT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>chr1A_1186
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TCTGCATTTCGCCATGACTAACTCCGTGCTCGACTCACCACCGCAACTCCCCGCCGCCGGTGCCTGG
GGCTGCCTGTACGGTGTGCAAGAACCTTTGAAATGCCAGCGTGTC---CCGGTGCTACCGGCCGCTGCCAAGAAGAAGCA
GCCGGC---GTACGGGGTCAAGAGGAACCTAGAGATGTGCACCGAGGCGCTCGGGTGCGAGACCGGCGGCGTCGACACAG
CCGCCGCCGATGTCGA---CGTGGGCATGGCGAGGAAGAGGCATGCCTGG------GAGCAGGAGGAGGAGGAGACGAAA
GCGGAGCCGATGGAGCGGAGGGCGCGCGTGCTGCCCCCGCCGCTGACGACGCTGGCGGCCGGCGCGACCCGCATGCGCAT
GGTCCACGAGCGGCGCGACGGGCGGCTGGAAGTGTACGCGGTGCGGACGGCCGGGATGGAGGCCGAGCGGAGCGGCGGGC
GTCTCCGCCTCCGCTTCCTCCCCTGCGCCGCCTGCAAGTGCAATGCCGCCAAGTGCAGCCAACAGGAATCGCAGGAAGCA
GAGGAACACGAGGC---------TGGTCTGCGTCAGCGGCCGGAGGACGCACACGTCGTCGCAAAGTACGCGCGCGGTGG
GCGGTGCGTGGAGGCGGAAGGTGGCGCGACGGCGGCAAGGCGCGGCGGGAAATGGGAGCCGGAGCAGGCGGCCGCGTTCT
GGGTGGCCATCACCTGAACTGAAACGGATT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS----S------SS---S---------S---------S------S-------S---------S-------
-----S------------------------------------------------------S-----S-------------
-----S-----------------------------S-------------------S----SS-SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S--------
----------S---------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------SS-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
-----------------------------------S--------------------------------------------
---------------------------S--------------------------------------------------S-
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S---------S----------------SSS----------------------------S--------------
--------------------------------------------------------------------------------
---------------S--------------S-------------------------------------------------
--------------------------------------------------------------------------------
---------S-----------S-----S----------------------------------------------------
--------------------------S-SS----------------------SS-------------------------S
---------SSSSSSSSS----------------------S---------------------------S-----------
----------S---------S-S------------------S----------------S----------S----S-----
-S------------------------S-----------------S----S------------------------------
---------------------------------S----------------S----------------------S------
---------------------------------SS------------------S------------S---S---------
------------------------------------------------------------------------S-------
-----------------S------S----S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS
>forward_783
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CCACACAGACAAAGCATCGG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>reverse_1928
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AACCACCTGAGCTACAACGG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>forward_1238
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CATTTCGCCATGGCTAACTCA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>reverse_2910
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TCTACATGCCACCATCTCGC-------------------------------
---------
