>input_sequence_66005
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--------------------------------------------AATGCAATGGAAAATATATTAGAGGAGTGACCAAGC
ATAAAAGAGGTACTGATATGCCTCCGAAAATGACGATCTTGAAGAAGAACACAAGCCTCCCAATTTTGGTGGCACTGATA
GTCATGGCTAATGTCCTCTACTTTTGCATTGCAAACAATGAGGTTACGTTGCATTTATCCTTTCCTTAGTCCCCATGATG
ACAACTTTATGTGCTTTTCGTATTGCTAAAATCCTCATAAAATCACACACATAAACAAACACTAATAATAATGTAGAAAC
ATAAATGAGAAAGTGCCTACCTCAAATTTAAGCTAACAGAGTGTGTTTTTTTGTGCAGATAGAGACAAATGATCTGCCCC
TACCAGCAAAATGCTACGAGATGCCTCTCCCAAACTGCACGGAGAAGGCGTGCCAGGAACTTTGCCAAGACCCTAAAGGA
TCATGCGACAAACTCTACACATACTTTTGTTGTTGTCCAATTTCCTAAAGGGGACTATAATGTTATAGTAATAGATATGT
CATGAATAATGCAATGCATGTATGGGACACATATGGTAGCTATCAATGTAAACCCTTTTGATATCTTCTCACCTTCATTC
AATTCGGAAATGGTTGGTATTAGTCGTGAATTGGAGGTACAAAATACCTAAATATGACATACGAACAAAAACAAAACTAA
ATGCCCCATGAACACAGAAAATATTGTACACATTCTGTAAGATGACTTCATAATGGAAAGCAAGTGTGAAGATGAGAAGT
TGTTAAATAACCTTATAATTCATACATGGCAGTCCCATTAATATATCATCAAAGTATTGATTGATTATTTTGATCATGAT
GATCATCCATCAAGGTACACCAATATTAAAATTGTCAGATCTGATTGTTTGATTCAATAAA-------------------
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>chr7B_1_TraesCS7B01G021800
TTATATCTTTTTAGAGCACGGTGGTGGTTTTATTTTGAAGAAATAGATGAACTCTCACGATTCACTTATATTATTTTGAG
AGTCTTA---AACAGCATGCTAATTTGATTTGGTTATAAAATTAGTCCTAATATGATGGGCATCCAAGATAGGTATAATA
AAAACTATCATATAAAGTGCATTGAATACTATGAGAAGTTTGATACTTGATGGTTGTTTTGAGATATGAGGATGGTAATA
TTAGGGTCATGCTAGTTGAGTAGTTATGAAATTGA-AAATACTTGTGTTAAAGTTGGCAAGTTCCGTAGCATGCACGTAT
GGTGAACGTTGTGTGACAAATTTGAAGCATGGGGTGTTCTTTGATTGCCTTCCTTATGAGTGGAGATCGGGATCGCGCGA
TGGTTAACTCCTACCAACCCTTCCCCTAGGAGCATGCATAGTAGTACTTTGCTTCGAGGGCTAATAAACTTTTGCAATAA
GTATATGAATTCTTTATGACTAACAAGTCAGGGGGAAACAAATACCCCTGTTTGTGTACACTGACAACAAGGCTCCGTTG
GGGCTTTTGTGAGAATGTGGTGAGTGGTGGAGTGGAATAGTGAGGAAAGTTAGGTGGCATGGAAAAACTAAGAACAACTA
AGCAACAGAGGACACAGACATATAAATCTCTAAGATGATGTAGTGTATGCCTGTAATCCACTTGATTGATATATTTACGC
TTTATGGTATTCATACGGAATATATGCTATTTTCTTATAAATATGAATGCATTTATTCATGTAATTATTTTTGCATATAC
AAAAGATATATATTAATATATTTCATAACCAATGAATTGGCAAGATAGGAAATCAATATCTAATATACTATATTCCACAG
TCAAGAATCAGTTGGACAATCTAAATATTGATATACAGGATATTATTTATCTAGCATTAAATGCATGAAACTAAAAATAA
ACGTCAACATTCATCTATATAACACCATGAAAGGTGAACACTGCAATGCAATGGAAAATATATTAGAGGAGTGACCAAGC
ATAAAAGAGGTACTGATATGCCTCCGAAAATGACGATCTTGAAGAAGAACACAAGCCTCCCAATTTTGGTGGCACTGATA
GTCATGGCTAATGTCCTCTACTTTTGCATTGCAAACAATGAGGTTACGTTGCATTTATCCTTTCCTTAGTCCCCATGATG
ACAACTTTATGTGCTTTTCGTATTGCTAAAATCCTCATAAAATCACACACATAAACAAACACTAATAATAATGTAGAAAC
ATAAATGAGAAAGTGCCTACCTCAAATTTAAGCTAACAGAGTGTGTTTTTTTGTGCAGATAGAGACAAATGATCTGCCCC
TACCAGCAAAATGCTACGAGATGCCTCTCCCAAACTGCACGGAGAAGGCGTGCCAGGAACTTTGCCAAGACCCTAAAGGA
TCATGCGACAAACTCTACACATACTTTTGTTGTTGTCCAATTTCCTAAAGGGGACTATAATGTTATAGTAATAGATATGT
CATGAATAATGCAATGCATGTATGGGACACATATGGTAGCTATCAATGTAAACCCTTTTGATATCTTCTCACCTTCATTC
AATTCGGAAATGGTTGGTATTAGTCGTGAATTGGAGGTACAAAATACCTAAATATGACATACGAACAAAAACAAAACTAA
ATGCCCCATGAACACAGAAAATATTGTACACATTCTGTAAGATGACTTCATAATGGAAAGCAAGTGTGAAGATGAGAAGT
TGTTAAATAACCTTATAATTCATACATGGCAGTCCCATTAATATATCATCAAAGTATTGATTGATTATTTTGATCATGAT
GATCATCCATCAAGGTACACCAATATTAAAATTGTCAGATCTGATTGTTTGATTCAATAAATTATATTACCAAATATAAC
AATGTAATTAGCACAAGAAACAACCAAAGTTACTTGATTTTTGAAAAAAAAATCATAATTAGGTCTTGTTCAATTGATGT
AAAATCCAAGGTGTTGTTGCAAAAGATATCAGTATGTTTGCGAGAAGACAACTGGATTTAAGTGTGTTACTGCGTGTTGT
GTCATGCTTCATAGTGGTGTCCTGATTGAAGATCGTATGCACAACTTCGCTTCACGAAATTTCTAAGGCAAGAAAGCAAC
GCTGCTAACATAACTAATGGTAATGGTTCACATTTGTGTGGGTGTGGATGGGATACTAGAGCATGTGAGTGCTTCGCTTT
CAGTACAATATTTTACAATTGTATGAACTATCAAACTTTCCACACAAAACAGGTGCATAGCTTAAATATGGTCTTCAAAG
TCTAAGAAAAATCACCCAATTGCCATCTTCCCCAAGCGGATACTTGGACAAAGATGAAACCCATTGGTTTTGCAAAAATA
AAAAACAACTGTATTTGTAGGTTAGATCTACCAAATCAATATGGACTTTTATATCTACCAAACGTTCGGACTTTAACAAT
AGGCAAGAACGATACTTACTTCACTCTAATTATAATATGCATGCATTAGAATGACTCATTTTTTCTTTGACGTGCACTCC
TCTCTCTAATTACATGCATATATGCATTAAAGGACGGAAATCTGATGTCATCCTAGATTTTTTTCAAACTTCAAAATGTT
TTGTAGCTCAAACCGTCACTCCGATTGAAATCCGTTTTCACATAAAAAATTCGTTGCGATGAGATCTTCAAAACAAGATC
CCATGTTGGTATGTTTCGGCGATATTTTTTTAGGTCCAAAGTTACCATGCCTAGACTACGTAAGCTATCACCACTGCAGT
ATGTAACTTATCATAGTGTTTGCACTGAAGTTATCACAAGGATGTTTCGACTACTTTATCCATGCGTCGAAGTTATCATC
GGGTCTACGGTTCATACTGAG
>chr6B_1
TTATATCTTTTTAGAGCACGGCGGTGGTTTTATTTTGAAGAAATTAATGAACTCTCATGCTTCACTTATATTATTTTGAG
AGTCTTTTAGAACAGCATAGTAATTTGCTTTGGTTATGAATTTAGTCCTAATATGATGGGCATCCAAGATGGGTATAATA
AAAACTTTCATATAAAGTGCATTGAATACTATGAGAAGTTTGATTCCTTATGATTGTTTTGAGATATAAAGGTGGTAATG
TTAGAGTCATGCTAGCTGGGTAATTATGAAATTGAGAAATACTTGTGTTAAAGTTGGCAAGTCCCGTAGCATGCACGTAT
GGTGAACGTTGTGTGACAAATTTGAAGCATGGGGTGTTCTTTGATTGCCTTCCTTATGAGTGGAGGTCGGGATCGCGCGA
TGGTTAACTCCTACCAACCCTTCCCCTAGGAGCATGCATAGTAGTACTTTGCTTCGAGGGCTAATAAACTTTTGCAATAA
GTATATGAGTTCTTTATGACTAA---------------------------------------------------------
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>chr4B_1
TTATATCTTTTTAGAGCACGGCGGTGGTTTTATTTTGAAGAAATTAATGAACTCTCATGCTTCACTTATATTATTTTGAG
AGTCTTTTAGAACAGCTTGGTAATTTTCTTTGGTTATGAATTTAGTCCTAATATGATGGGCATCCAAGATGGGTATAATA
AAAACTTTCATATAAAGTGCATTGAATACTATGAGAAGTTTGATACTTGATAATTGTTTTGAGATATAAGGGTGGTGATA
TTAGAGTCATGCTAGTTGGGTAATTATGAAATTGAGAAATACTTATGTTAAAGTTGGCAAGTCTCGTAGCATGCACGTAT
GGTGAACGTTGTGTGACAAATTTGAAGCATGGGGTGTTCTTTGATTGCCTTCCTTATGAGTGGAGGTCGGGATCGCGCGA
TGGTTAACTCCTACCAACCCTTCCCCTAGGAGCATGCGTAGTAGTACTTTGCTTCGAGGGCTAATAAACTTTTGCAATAA
GTATATGAGTTCTTTATGACTAA---------------------------------------------------------
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>SNPs
---------------------S----------------------SS-----------S-S--------------------
------S------------S-------S---------S--S-----------------------------S---------
------S---------------------------------------------S--------------S---S--------
----S-------------S---S---------------------------------------S-----------------
-----------------------------------------------------------------S--------------
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--------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS
>forward_559
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-----------------------------------------------------------ACTGACAACAAGGCTCCGTT-
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>reverse_2145
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----------------------------------------------------------------AAGGCAAGAAAGCAAC
GCTG----------------------------------------------------------------------------
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