>input_sequence_65965
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------------------ATGGGCAAGGGCGGCGGCTGCGTGTTCAGCAAGGGCCAGCGCCTCCCGCTCCCCCCGCACCG
CCGCGACCGCACATTCATCCCGGCCCCTGCCACCACCGCATCGGAGCCGACCCCGGC-----------------------
----CACCACCGCGCCAGAGCCGACCCCGGCCACCGCCGCGCCGG-----------------------------------
----------CGCCACGCCAGGTCCGTATCTACGTCGTCTTCTACTCCATGTACGGGCAGGTGCGGCGCCTGGCGCGGGC
GGTGCAGCGCGGGGTGGGGTCCGTCCCGGGCGCGCTGGGGATCCTGCTGCGCGTGCCGGAGACCCTGCCGCGCGCCGTGC
TGGCCAGGATGGGCGCGCTGGAGGCCGCCGCGGAGATGGACGCGGAGGGGATCCCCGTGGCGGACCCCGGCGGGCTCCCC
GACGCCGACGGGTTCCTCTTCGGCTTCCCCGCGCGGTACGGCGCCATGGCCGCGCAGATGCAGGCCTTCTTCGACTCCAC
CGCGCCGCTCTGCCGCGGCCAGCGCCTCGCCGGCAAGCCCGCCGGCTTCTTCGTCAGCACCGGCACCCAGTGCGGAGGCC
AGGAGACCACCGCGTAAGCCTTTCTTTCAGGCCA---------CCGCCGCCAGATCGCGTGGTTTCGCCTCCGGCCAGCC
GTAACCGTGTTCGTCCGTTCGTGTCTCCT----CTGTCT----GCAGGTGGACGGCGATCACGCAGCTGGCGCACCACGG
CATGCTGTTCGTGCCCATCGGGTACACCTTCAGAGAGGGGATGTTCGAGATGGAAGAGCTCCGCGGGGGCTCGCCGTACG
GCGGCGGGGTGTTTGCCGGCGACGGCTCCAGGCCGCCCAGCGAGCTGGAGCTGGCCCTCGCCGAGCACCACGGCAGGTAC
ATGGCCACGCTGGTCAAGAGGATGGTGCACGGCGCCGATGCCTGA-----------------------------------
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>chr5A_1_TraesCS5A01G387200
CTTCTGAAGGAACACGAATTCCCTTCCAAAGATGACAAATTTTTTGATCGAAGATCCTGCTACATGGACTGAGGAGGAGT
GGAGGCGAGGATCATGTCGGGGACGGTCTCGAGCAGGTAGGTGAAGAGCCCGCCGAGCAGGAAGAGGAAGACGAAGGCGA
GCCCGATCTTGGCCAGGTACACGGAGGCGCCCTTCTTCCTCAGCAGTTCCCTCTCGCGAGCCCCCTTCCCCTCGTCTCCG
GGCGGTGGCGCGTGA---------TGATGCGCGCCCGGCGCGTCCTGCTCGGTGACGGTCTGGAGCCGCCAGCCGCGGCC
GTAGTCGGCGAGGGGCGCGGTGGGGCCGAAGCACACGGGCTCCTCCCCCTCCTTGGCCGCCTCCACGTGCAGCGCCGCCG
GGGCGCCGGGGGCCAGCTTGCGGTTCACCGCGTGCAGCGCGTACCCGGCGGTCGTCCCCGCCGCGAACCGCCGCACCTCG
CCGGAGCTCCTGCAGGTCACCTCCAAGAACTGCAGACCAATAATCGCTC--AGAGAATTCTACAGTATTCAGACAGATAT
AAT--------TGGATGCTTGTGCTCTGAGCGGTTTACCGGCGGGGGAGGTGGGTTGCCGGCGCCGTCCTTGTGCACCGT
CTCGTCAGCTCGCCGCTCCGTCGCCGGCTCGTCGGGTCCCGGCGGCTTGCTGGCCTCCGGATTCGCCATGGCCGCGGGTG
TGCAGGAGCAGAGGAAAGCAG--------------------GTAGTGGTTGACTTGTAAATTCACGTGGGTAGGTTGTTT
ATACGTTCGGATCGGGCCGAGCAAGGCCCAGACTAAAACCGGGCCTGACAGGATCCACTGGGCTTGCATTTGGATCCCAC
CTGCTGCA---AGGGCCGTACAGGCCCAGCTCGCG-TGCGGTTACG----ACCCGCACGGGCCGGCGGCCGCAGCGGCGT
TCGTTTGTCCCGATCGCGCGCGCTGCTCCTACGTGTCGTGTCAGAGTGA-GCCAGTGACCGGCGTCGCTCCCCTCCCC--
--------GCCGGCAGCGATGGGCAAGGGCGGCGGCTGCGTGTTCAGCAAGGGCCAGCGCCTCCCGCTCCCCCCGCACCG
CCGCGACCGCACATTCATCCCGGCCCC---------------------------TGCCACCACCGCATCGGAGCCGACCC
CGGCCACCACCGCGCCAGAGCCGACCCCGGCCACCGCCGCGCCGG-----------------------------------
----------CGCCACGCCAGGTCCGTATCTACGTCGTCTTCTACTCCATGTACGGGCAGGTGCGGCGCCTGGCGCGGGC
GGTGCAGCGCGGGGTGGGGTCCGTCCCGGGCGCGCTGGGGATCCTGCTGCGCGTGCCGGAGACCCTGCCGCGCGCCGTGC
TGGCCAGGATGGGCGCGCTGGAGGCCGCCGCGGAGATGGACGCGGAGGGGATCCCCGTGGCGGACCCCGGCGGGCTCCCC
GACGCCGACGGGTTCCTCTTCGGCTTCCCCGCGCGGTACGGCGCCATGGCCGCGCAGATGCAGGCCTTCTTCGACTCCAC
CGCGCCGCTCTGCCGCGGCCAGCGCCTCGCCGGCAAGCCCGCCGGCTTCTTCGTCAGCACCGGCACCCAGTGCGGAGGCC
AGGAGACCACCGCGTAAGCCTTTCTTTCAGGCCA---------CCGCCGCCAGATCGCGTGGTTTCGCCTCCGGCCAGCC
GTAACCGTGTTCGTCCGTTCGTGTCTCCT----CTGTCT----GCAGGTGGACGGCGATCACGCAGCTGGCGCACCACGG
CATGCTGTTCGTGCCCATCGGGTACACCTTCAGAGAGGGGATGTTCGAGATGGAAGAGCTCCGCGGGGGCTCGCCGTACG
GCGGCGGGGTGTTTGCCGGCGACGGCTCCAGGCCGCCCAGCGAGCTGGAGCTGGCCCTCGCCGAGCACCACGGCAGGTAC
ATGGCCACGCTGGTCAAGAGGATGGTGCACGGCGCCGATGCCTGATTCATCATCTAATAGAGATTCTACTTACAATCCTT
TTGCCCTGTCGATGCTGCGCTGGGCACCATCGTTTTGTAGAT----AAACAGCATTGCCATTTAGCCTAGCCCCAGAATT
CAGTTACAGATTACTCTGCAAACGCATGGAGTGTGTTGAATTTTCGTT--AGACATCCCT--------------------
GGGCGTAGCCATTATATGCACAGTTCAAATTACCCAAAACACAATAAA-CACCTTATATTATTCAATTTATTAAGCAAAT
CAATCTGTTTAGGGGACGTGGTTATTGCACATCGAAGTGACTCAATCAAGCATAAAAAAATACCCAAAAAATACCCACAC
AGATCACCGTGTAAGACATAGGACTCGGATGTGGAATACTTACCGCGCATGTGCTTGGCAAAACTGACAGTAAAAAGTAT
CTCAGGCCTGCCGGAAGACAGCCTCACAAGTCACAACCCACAGCGCCTTTCACGTGGTTCACGCATAAAAACAAAGCTAC
TCCCTCACAAATGATCCGCCGCCGTTCACTCCTAAACAACTTCAAAAAAAATTGCAGATTCTGATAGTACAAAAGAATAT
GTCCCTGAAAAAGGTCAGGGGCCGCATCAACCCCAACAAATCTAATCCTGTTCGACCAACCTCATACAACACATGTCTGG
CCTACTACTCTTTTTCGCATGGGTGGATATCCT-AACACATCACAAACCTAACGAGCACTCA---------------TGG
AGCAATCTTAACCCAAAA-CCGACTCTTGTAGACCGAATGGCACCTCACTTCTTAGAAGGCGTACCATTTGCAATCTTTT
GCTTGGAACCTGCTTGGGGATCCTTCGCTGTCTTGGATGAAGAAGCGCCATCTATGGCGATGTTCCCCAGCTCCGCAGCC
ATTGCATCTCTTTCATCATCTTTCTCTTTGCCTTTGTTCTCTGGAGCGCCATCAACTGGATTCTCAGCCGTGTCCGCCAG
CGCTCTGGGCTGCCGTCGAAGGGGTCCAGCATCAAACCATGGGTGCTGA
>chr5B_7
------AAGGAACACGAATTCCCTTCCAAATATGACAAAATG---GATCGAAAATTCTGCTACATGGACTGAGGAGGAGT
GGAGGCGAGGATCATGTCGGGGATGGTCTCGAGCAGGTAGGTGAAGAGCCCGCCGAGCAGGAAGAGGAAGACGAAGGCGA
GCCCGATCTTGGCGAGGTACACGGAGGAGCCCTTCTTCCTCAGCAGCTCCCTCTCGCGAGCCCCCTTCCCCCCGTCTCCG
TGCGGCGGCGCGTGGTGCGCGTGGTGATGGGCGCCCGGCGCGTCCTGCTCGGTGACGGTCTGGAGGCGCCAGCCGCGGCC
GTAGTCGGCGAGGGGCGCGGTGGGGCCGAAGCACACGGGCTCCTCGCCCTCCTTGGCCGCCTCCACGTGCAGCGCCGCCG
GGGCGCCGGGGGCCAGCTTGCGGTTCACCGCGTGCAGCGCGTACCGGGCGGTCGTCCCCGCCGCGAACCGCCGCACCTCG
CCGGAGCTCCTGCAGGTCACCTCCAGGAACTGCAGGCCGATAATTGCTCAGAGAGGATTCTACAGTAATCGGACAGATAT
AGTAAGCTAGCTGGATGCTTGTGCTCTGAGCGGCTTACCGGCGGGGGAGGGGTGTTGCCGGCGCCGTCCGTGCGCGCCGG
CTCGTCAGCTCGCCGCTCCGGCGCCGCCTCGTCCGGTCCCGGCGGCTTGCTGGCCTCCGGATTCGCCATGGCCGCGGGCG
TGCAGGAGCAGAGGAATACTTTTTGTTTTTGAGGGAAACTAGTAGTGGTTGACTTGTAAATTCACGTGGGTAGGTTGTTT
ATAGGTTCGGATCGGGCCGAGCGCGGCCCAGACTAAAACCGGGCCTCACACGATCCACTGGGCTTGCATTTGGATCCCAC
CTGCTGCTGCCAGGGCCGCACGGGCCCAGCTTGCG-TGCGGTTACGACCCACCCGCACGGGCCGGCGGCCGCAGCGGTGT
TCGTTGGCCGCGATCGCGCGCGCTGCTCCTACGTGTCGTGTCAGAGTGAAGCCGGTGACCGGCGTCGCTCCCCTCCCCGC
CGCGGCAGGCCGGCAGCGATGGGCAAGGGCGGCGGCTGCCTGCCCAGCAAGAGCCAGCGCCCCCCG---CCCCCGCATCG
CCGCGACCGCACCTTCATCCCGGCCCC---------------------------GGC-----------------------
----CACCACCGCACCAGAGCCGGCCCCGGCCACCGCCGCGCCGGA---------------------GCCGGAGCCGGAG
CCAGCGCCGTCGCCACGCCAGGTCCGCATCTACGTCGTCTTCTACTCCATGTATGGCAACGTGCGGCGCCTGGCGCGGGC
GGTGCAGCGCGGGGTGGGTTCCGTGCCGGGCGCGCGGGGGATCCTGCTCCGCGTGCCGGAGACGCTGCCCCGCGCCGTGC
TGGCCCGGATGGGCGCGCTGGAGGCCGCCGCGGAGATGGACGCGGAGGGGATCCCCGTGGCGGACCCCGGCGGGCTCCCC
GACGCCGACGGGTTCCTCTTCGGCTTCCCCGCGCGGTACGGCGCCATGGCCGCGCAGATGCAGGCCTTCTTCGACTCCAC
CGCGGAGCTCTGCCGCGGCCAGCGCCTCGCCGGCAAGCCCGCCGGCTTCTTCGTCAGCACCGGCACCCAGTGCGGCGGCC
AGGAGACCACCGCGTAAGCCTTTCTCTTTCACGCCGTCCATCGCCGCCGCGAGATCGCGTGGTTTTGCCACCGGCCAGCC
GTAACAGTGTTCGTCCGTTTGTGTCTCCT----CTGTCTGTGTGCAGGTGGACGGCGATCACGCAGCTGGCGCACCACGG
CATGCTGTTCGTGCCCATCGGGTACACCTTCAGAGAGGGGATGTTCGAGATGGAGGAGCTCCGCGGGGGCTCGCCGTACG
GCGCCGGGGTGTTCGCCGGCGACGACTCCAGGCCGCCCAGCGAGCTGGAGCTGGCCCTCGCCGAGCACCACGGCAAGTAC
ATGGCCACGCTGGTCAAGAGGATGGTGCACGGCGCCGATGCCTGAT----------------TCTACCAAGAACCC---T
TTGCCATGTCGCTGCTGCGTCGGGCGGCGTCGTTTTGTACAC----AAACAACATTGCTATTTAGCCTAGCCCCAGAATT
CTGTTA-AGATTACTCTGCAAACGCATGGAGTGCGTTGAACATTCATTAGAGTGAAGATATCATTTTGATCGACATCACC
GGGCGTAGCCATTATATGCACATCTCAAATTACCCAAA-CACAATCAG-CACCTTATTATTCGATCTT----AGCAGAAT
ACAGCCAGAGTGAACTTATGGTTAACC-----------------------------------------------------
-----------------------------------------------------------------GACAGTAAAAAGTAT
CTCAGGCCTGCCGGAAGACAGCCTC-------ACAATCCACAACGCCTTTCACGTAGCTCACACATCTAACAA-------
----------------------------------------TTCAAAAAAATTTGCAGATTCTGATAGTACAAAAGAATAT
GTCCGTGAAAAAGGTCAGGGGCCGCATCAACCCCAACAAATCTAATCCTGTTCGACCAACCTCATACAACATATGTCTGG
CCTACTACTCTTTTTCGCACGGGTAGATATCCT-AACACATCACAAACCTAACGAGCACTCACTCATTTCCCACTCATGG
AGCAATCTTCACCAAAAACCCGAGCCTTGTAGACCGAATGGCACCTCACTTCTTAGAAGGCGTACCATTCGCAATCTTTT
GCTTGGAGCTTGCTTGGGGATCCTTCACTATCTTGGATGAAGAAGCGCCGTCTATGGCGATGTTCCCCAGCTCCGCAGCC
ATTGCATCTCTTTCATCGTCTTTCTCCTTGCCTTTGTTCTCTGGAGCGCCATCAACTGGATTCTCAGCTGTGTCCGCCAG
CACTCTGGGCTGCCGTCGAAGGGGCCCAGCATCAAACCATGGGTGCTG-
>chr5D_10
---------GAACACAATTCCTCTCCCAAAGATGACAGAATG---GATCGAAAATCCTGCTAAATGGACTGAGGAGGAGT
GGAGGCGAGGATCATGTCGGGGATGGTCTCGAGCAGGTAGGTGAAGAGCCCGCCGAGCAGGAAGAGGAAGACGAAGGCGA
GCCCGATCTTGGCGAGGTACAGGGAGGCGCCCTTCTTCCTCAGCAGTTCCCTCTCGCGAGCCCCCTTCCCCCCGTCTCCG
GGCGGCGGCGCGTGGTG---------ATGGGCGTCCGGCGCGTCCTGCTCGGTGACGGTCTGGAGGCGCCAGCCGCGGCC
GTAGTCGGCGAGGGGCGCGGTGGGGCCGAAGCACACCGGCTCCTCGCCCTCCTTGGCCGCCTCCACGTGCAACGCCGCCG
GGGCGCCGGGGGCCAGCTTGCGGTTCACCGCGTGCAGCGCGTACCGGGCGGTCGTCCCGGCCGCGAACCGCCGCACCTCG
CCGGAGCTCCTGCAGGTCACCTCCAAGAACTGCAGGCCAATAATTGATCAGAGAGAATTCTACAGTAATCGGACAGGTAT
AAT-AGCTAGCTGGATGCTTGTGCTCTGAGCGGTTTACCGGCGGGGGAGGGGGGTTGCCGGCGCCGTCCTTGCGCGCCGT
CCCGTCAGCTCGCCGCTCCGGCGCCGCCTCGTCGGGTCCCGGCGGCTTGCTGGCCTCCGGATTCGCCATGGCCGCGGGCG
TGCAGGAGCAGAGGAAAGCAG--------------------GTAGTGGTTGACTTGTAAATTCACGTGGGTAGGTTGTTT
ATAGGTTCGGATCGGGCCGAGCGCGGCCCAGACCAAAACCGGGCCTCACACGATCCACTGGGCTTTCATGTGGATCCCAC
C---TGCTGCTAGGGCCGCACGGGCCCAGCTCGCGGTGCGGTTACGACCCACCCGCACGGGCCGGCGGCCGCAGCGGTGT
TCGTTGGCCGCGATCGCGCGCGCTGCTCCTACGTGTCGTGTCAGAGTGAAGCCGGTGACCGGCGTCGCTCCCCTCCCC--
--------GCCGGCAGCGATGGGCAAGGGCGGCGGCTGCGTGCCCAGCAAGAGCCAGCGCCCTCCA---CCCCCGCAGCG
CCGCGACCGCACCTTCATCCCGGCCCC---------------------------GGC-----------------------
----CACTGCCGCACCAGAGCCGACCCCGACCACCGCCGCGCCGGAGCCGACCGCGACCACCGCCGCGCCGGAGCCGGCG
CCAGCGCCGTCGCCACGCCAGGTCCGCATCTACGTCGTGTTCTACTCCATGTATGGCAACGTGCGGCGCCTGGCGCGGGC
GGTGCAGCGCGGGGTGGGGTCCGTGCCGGGCGCGCGGGGGATCCTGCTCCGCGTGCCGGAGACCCTGCCGCGCGCCGTGC
TGGCCCGGATGGGCGCGCTGGAGGCCGCCGCGGAGATGGACGCGGAGGGGATCCCCGTGGCGGACCCCGGCGGGCTCCCC
GACGCCGACGGCTTCCTCTTCGGCTTCCCCGCGCGGTACGGCGCCATGGCCGCGCAGATGCAGGCCTTCTTCGACTCCAC
CGCGCCGCTCTGCCGCGGCCAGCGCCTCGCCGGCAAGCCCGCCGGCTTCTTCGTCAGCACCGGCACCCAGTGCGGCGGCC
AGGAGACCACCGCGTAAGCCTTACTCTTTCAGGCCGCCCATCGCCGCCGCGAGATCGCGTGGTTTCGCCTCCGGCAAGCC
GTAACCCTGTTCGTGGATTCGTGTCTCCTCTGTCTGTCT----GCAGGTGGACGGCGATCACGCAGCTGGCGCACCAGGG
CATGCTGTTCGTGCCCATCGGGTACACCTTCAGAGAGGGGATGTTCGAGATGGAGGAGCTCCGCGGGGGCTCGCCGTACG
GCGCCGGGGTGTTCGCCGGCGACGGCTCCAGGCCGCCCAGCGAGCTGGAGCTGGCCCTCGCCGAGCACCACGGCAAGTAC
ATGGCCACGCTGGTCAAGAGGATGGTGCACGGCGCCGATGCCTGATTCATCTACTAGCAGATTCTACCAAGAACCC---T
TTGCCGTGTCGCTGCTGCGTCGGGCAGCGTCGTTTTGTACATAAACAAACAGCATTGCTATTTAGCCTAGCCCCAGAATT
CAGTTA-AGCTTACTCTGCAAACGCATGGAGTGTGTTGAACTTTCATT--AGTGAAGATATCATTTTGATTGACATCACC
GGGTGTAGCCATTATATGCACAGCTCAAATTACCCAAAACACAATAAGGCACCTGAAATTATTCAATCTAGAAGCAAAAT
ACGGCCAAATTGAAG-------TAACC-----------------------------------------------------
-----------------------------------------------------------------GATAGTAAAAAGTAC
CTCAGGCCTGCCGGAAGACAGCCTC-------ACAACCCACAGCACCTTTCACGGGGTTCACGCATAAAAACAAAGCTAC
TCCCTCACAAATGATCCGCCGCCGTACAATCCTAAGCAACTT--AAAAAAAATGCAGATTCTGATAGTACAAAAGAATAT
GTCCGTGAAAAAGGTCAGGGGCCGCATCAACCCCAACAAATCTAACCCTGTTCGACCAACCTCATACAACATATGTCTGG
CCTACTACTCTT-TTCGCATGGGTAGATATCCTAAACACATCACAAACCTAACGAACACTCACTCATTTCCCACTCATGG
AGCAGTCTTAACCGAATA-CCGAGCCTTGTAGACCGAAGGGCACCTCACTTCTTAGAAGGCGTACCATTTGCAATCTTTT
GCTTGGAGCTTGCTTGGGGATCCTTCACTGTCTTGGATGAAGAAGCGCCATCTATGGCGATGTTCCCCAGCTCCGCTGCC
ATTGCATCTCTTTCATCGTCTTTCTCCTTGCCTTTGTTCTCTGGAGCACCATCAACTGGATTCTCAGCCGTGTCCGCCAG
CGCTCTGGGCTGCCGTCGAAGGGGTCCAGCATCAAACCATGGGTGCTGA
>SNPs
SSSSSS---------------------------------S-SSSS-------S---------------------------
-----------------------S--------------------------------------------------------
-------------S---------------------------------------------------------S--------
-----S--------S--------------S-----------------------------------S--------------
---------------------------------------------S----------------------------------
---------------------------------------------S----------------------------------
-----------------------------------S--------S----------------------S--S---------
--------------------------------------------------S---------------------S--S----
--------------------S-----S---------------------------------------------------S-
--------------------------------------------------------------------------------
---S------------------SS----------------------S---S-----------------------------
-------S----------S--S-------------------------------------------------------S--
-----S-S-S-------------------------------------------S--------------------------
------------------------------------------SS-------S---------S----SSS--------S--
------------S-----------------------------------------S--SSSSSSSSSSSSSSSSSSSSSSS
SSSS---------S------------------------------------------------------------------
--------------------------S--------------------------S--SS-S--------------------
------------------------S----------S------------S-------------------------------
-----S--------------------------------------------------------------------------
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---------------------------------------------------------------------------S----
-------------------------S-SSSS-SS----------------S-----------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
---S---------S-------------------------------------------------------------S----
---------------------------------------------------SS---SS---SSS-SSSSSS-SSSSSSS-
-----S-----S-------SS-----S-S----------S------------------S---------------------
------S---------------------------------S----S------SS-SSSSS--------------------
-----------------------S-----------------------S----------------------SS-SSS----
SS-S-SSSS-S-SS-SSS------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------
-------------------------SSSSSSS------------------------------------------------
-------------------------S--S------S--------------------------------------------
----S------------------------------------------------------------------S--------
------------------------S-------------------------------------------------------
-------------S---------SS-------------------------------------------------------
-------S-S----------------S-----------------------------------------------------
-----------------S--------S-----------------------------------------------------
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>forward_851
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-------------------------------ACTAAAACCGGGCCTGACAG-----------------------------
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>reverse_2078
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-----------------------------------------------------------------------------CTT
TTGCCCTGTCGATGCTG---------------------------------------------------------------
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