>input_sequence_65915
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------ATGGCGCTGACACGCCGGAGTCCTACCTCC---CTCCTGGTCATCGCCGCTGTTCTCTCCGTTCACGGCCTCCT
CCCCGCTCCGGCCGCCGCCACGGGGAAGACCGGCCAGCTCACCGTCTTCTGGGGCCGGAACAAGGACGAGGGCTCTCTCA
GGGAAGCCTGCGACGCCGG------CCTCTACACCGCGGTCATCATGTCCTTCCTCAACGTCTACGGCCACGGCAAGTAC
CGCCTCGACCTCTCCGGCCACCCGCTCGCCGGCATCGGGGGCGACATCAGGCACTGCCAGTCCATGGGCGTCACCGTCTC
CCTCTCCATCGGCGGCTTCGGCGGCGACTACGCGCTCCCGACCAACCGGTCCGCGCTCGACCTCGCCGACCACCTCTGGT
TCTCCTACCTCGGCGGCAGGCGCAGGGGCGTGCGCCGCCCGTTCGGCCGCGCGCGGCTGGACGGCGTCGACCTCTTCATC
GAGCG------GGGCGG---GCCGGCGGAGCACTACGACGGGCTGGCGAGGGGGCTGGCCAGGCGCAGGGC------CAG
CGGGGGGAAGGCGCCGCGGCTGACGGCGACGCCGCGCTACGCGTTCCCGGACAGGCTTGCGGCGCCGGCGCTCTCGACGG
GGGTCTTCGAGCGCATCCACGTGAGGTTCTACGACTACCCGGACTGCACGGCGTTCATCGAGGACGCGTGGGGCAGGTGG
ACGGCGGCGTACCCGGGCAGCAAGATCCACCTCGGCCTGACGGCGTCGGAGAAGGCGAGCTGCTACCTGCACCCCAAGGC
GCTCTGGGAGATCACGATGCCGATCGTGCAGAAGGCGGCCAACTACGGCGGCGTCATGCTCTGGGACCGGTACTACGACG
TGGCGAACGTCCAGGACCACTACAGCAGCTACATCAAGAACTGGGCCTGA------------------------------
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--------------------------
>chr5D_1_TraesCS5D01G325500
TGTATATGGTGAGAAAGCTACTATAGAGTTTTATAGTTTCCTTGACATCCAACATTAATTTCTTAAAAGTATGAAAAATC
AAAATAGGTAGAAGTTGATAGCAAATCGCACTTAATCGGCATTAAATGGTTACTCGCAAAATAATAACCTTAACTGGTTT
GCCCTTGCTTCCAACAGTTTTGGGAAAAACTGACTGAAGCAAATAAAAATATCAGGCAATTGATCTTGGACT-GAATATT
CAGCGAATGTCTGATTGTTAGGCATGGCAAATCGAACATTTTACATGGTGAATTATATTCATTGAGGATGACAAGTTTAG
TTGACGAGCATGACAAATATGTTCGGTTCATCTTTAGGATAGAAAATTGCCGTGCTTACGAACTAAATTTGGCATCATTA
CGTCAATATAAATTGCCATGAAAAACATCAGATTTGTCATGTCTAAAAATCTGACATCAGATTTTCT-------------
----------GCGTTTCCGTTGATCCTTAGGTGCTCCCTTAGTTTTAAGAGACATGCAGTACTATTTAGTAGAGCAAAAC
GCAGAAAAGCTATACATGCTCAAGTGTTCTTTGGGTGAGTGGGAAAAGAACGGCATTGATGCGTGGACCTTCACCACGTT
GCCTTGTTGGCCTGTTCTCGTCGTCTCGTCGGTCTCACTCGTCGACATGCATTTATTCCGGATTGCCGGAGCGGTGCTCC
GTTTCTCATCTCGTAACCTCCTCGATGTGCTTTTCAGCTCCGCTTAGTCATGTTA-TTGTTATCCTACTACTCCTAGCTC
GATCAAGCTGAGTGCGCTTCCCATATGTGGAACAATTTCCCCATGAACGCCGGCAAGCCAGCTAAGTGAGTCCAGCTACC
TATGGCCG-------CGCAACACATCGCGAGAGATCAAAAGCCACCT---------CCCACATCTCGACTCGCACCGTAA
CCAATAATTCATCTTC-----TATATATAAAGCACATTCTAGCCAGCTAGCTAATTCGATCTCCCTTGAGTACGTAGTAA
TCAGAAATGGCGCTGACACGCCGGAGTCCTACCTCC---CTCCTGGTCATCGCCGCTGTTCTCTCCGTTCACGGCCTCCT
CCCCGCTCCGGCCGCCGCCACGGGGAAGACCGGCCAGCTCACCGTCTTCTGGGGCCGGAACAAGGACGAGGGCTCTCTCA
GGGAAGCCTGCGACGCCGG------CCTCTACACCGCGGTCATCATGTCCTTCCTCAACGTCTACGGCCACGGCAAGTAC
CGCCTCGACCTCTCCGGCCACCCGCTCGCCGGCATCGGGGGCGACATCAGGCACTGCCAGTCCATGGGCGTCACCGTCTC
CCTCTCCATCGGCGGCTTCGGCGGCGACTACGCGCTCCCGACCAACCGGTCCGCGCTCGACCTCGCCGACCACCTCTGGT
TCTCCTACCTCGGCGGCAGGCGCAGGGGCGTGCGCCGCCCGTTCGGCCGCGCGCGGCTGGACGGCGTCGACCTCTTCATC
GAGCG------GGGCGG---GCCGGCGGAGCACTACGACGGGCTGGCGAGGGGGCTGGCCAGGCGCAGGGC------CAG
CGGGGGGAAGGCGCCGCGGCTGACGGCGACGCCGCGCTACGCGTTCCCGGACAGGCTTGCGGCGCCGGCGCTCTCGACGG
GGGTCTTCGAGCGCATCCACGTGAGGTTCTACGACTACCCGGACTGCACGGCGTTCATCGAGGACGCGTGGGGCAGGTGG
ACGGCGGCGTACCCGGGCAGCAAGATCCACCTCGGCCTGACGGCGTCGGAGAAGGCGAGCTGCTACCTGCACCCCAAGGC
GCTCTGGGAGATCACGATGCCGATCGTGCAGAAGGCGGCCAACTACGGCGGCGTCATGCTCTGGGACCGGTACTACGACG
TGGCGAACGTCCAGGACCACTACAGCAGCTACATCAAGAACTGGGCCTGAGCTCCGGCCATGTCCTCCTCCACGCATCAC
CTTGCGTGCTCCTCCCTTGGCAAACGCCTCTAGCTCCTTAATTTGCTTGCGCATGTGTAAATCGAAAGTAATCTGCTGTT
AGTCGTCACTCTTGTGTGCT--TGCAAGAATAAAGGGACGACGGTGCAGTACAGGGATAAACAGTTCATTTCAGAGGTTT
GGTTCAATCATGTTGTTCCCTGTGGATGTCACAATTATCATCAGATTACTGCTTGATTACGTTTTGAAATGTATACCTCA
ACCACGGGTGCGTGCAATCAATAATCAGCCCTTAGAGCATCTCCAACAGCCGCGCG-------GTACGTTAAAAAAGCGT
TTACAGTATCGGAATCACGAGTTTTTTGCGCGGCGAGGAGCGCTTGCTCCAGCAGCC-GCTGCAAATTATAGCGCACGGG
AACCGCTCCAGCAGCCGCTGCAAAAAAAG-CGAGCATG--CTCTC-AGCACAAACAACATATGCACTCCAAACACAACCA
AGAAGATCAAACACAAACAAAATAAATCAACAATAAATAGTTTAATTTTATTATTACAACTCAAACAAATAGTTTATCTT
GCAATACAACAAATAGTTCGACAACACAACATCAAACATACAAATCATGATGCTTTTTGATGGTCATTCCATGCCCACCA
CTCCTGGATGAGATCCTTCTGAAGATCATCATGCGTTCCGGCACGTCGAATGTCCTGATAGGA-GCAACAAAACGGGCCA
CCCTCGCAACCCTCCGCCGCACTCGCATGGGATGTCCCAAGAGCTCATACTGAGAGTAGTCTAAATCTTGGCCACGCCCA
TTCTCGATGATCATATTGTGCATGATCACACAAGCTTGCATGATGTACCAAAGCATC-TTTTGATCCCAAAATCTAGCCG
GCCCTCTCACAATGGCAAATTGGGCTTGCAAAATCCCGAAAGCTCTCTCCACATCTTTCCTAGCCGTCGCCTGAGCATTG
TGGAAATCTAGATTTTTCTTACCTTC
>chr5B_160
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
GCCCTTGCTTCCAGCAGTTTTGGGAAAAACTGACTAAAGCAAATAAAAATGTCAGGCAATTGATCTTGGACGCGAATATT
CAGCAAATGTCAGATTTTTAGGCATGGCAAATCGAATATTTTTCATGGCGAATTATATTAATTGAGGACAACAAGTTTAG
TTGACGAGCATAGCAAATCTGCTCAGTTCATCTTTTGGACAGGAAATTGGCGTACTTACAAACTAAATTTGCCATCATTA
CGTCAATATAAATTGCCATGAAAAACATCAGATTTGTCATGTCTAAAAATCTGACATCAGATTTTCAGCGTTACCATTTT
TTTCTCTCCAGCGTTTCCGTTGATCCTTAGGTGCTGCGTTAATTTTAAGAGACATCCAGTACTGTTTAGTAAAGCAAAAC
GCAGAAAAGCTATACATGCTCAAGTGTTCTTTGAGTGAGTGGGAAACGAACGGCATTGATGCGTGGACCTTCACCACGTT
GCCTTGTTGGCCTGTTCTCGTCGTCTCGTCGGTCTCACTCGTCGACATGCATTTATTCCGGATTGCCGCAGCGGTGCTCC
GTTTCTCATCTCGTAACCTCCTCGATGTGCTTTTCAGCTCCGCTTAGTCACGTTA-TTGTTATCCTACTATTCCTAGCTC
GATCAAGCTGAGTGCGCTTCCCATATGTGGAACAATTTCCCCATGAACGCCGGCAAGCCAGCTAAGTGAGCCCAGCTAAG
TTAGCCACCTATGGCCGCTACACAGGGCGAGATATCGAAAGCCACCTAGCTGCACTCCCACATCTCGACTCGCACCGTGA
TCAATAATCCATCTTCCTATTTATATATGGAACACATTCT----AGCTAGCTAATTCGATCTTCA--GAGTAGGTGGTAA
TCGGAAATGGCGCTGGCACGCCGGAGCCCGGCCTCC---CTCCTGGTCATCGCCGCGGTTCTCTCCGTTCACGGCCTCCT
CCCCGCTCCGGCCGCCGCCACGGGGAAGACCGGCCAGCTCACCGTCTTCTGGGGCCGGAACAAGGACGAGGGCTCTCTCA
GGGAAGCCTGCGACACCGG------CCTCTACACCGCGGTCATCATGTCCTTCCTCAACGTCTACGGCCACGGCAAGTAC
CGCCTCGACCTCTCCGGCCACCCGCTCGCCGGCATCGGGGACGACATCAGGCACTGCCAGTCCATGGGCATCACCGTTTC
CCTCTCGATCGGCGGCTTCGGCGGCGACTACGCGCTCCCGACCAACCGATCCGCGCTCGACCTCGCCGACCACCTCTGGT
TCTCCTACCTCGGCGGCAGACGCAGGGGCGTGCGCCGCCCGTTCGGCCGCACGCGGCTCGACGGCGTCGACCTCTTCCTG
GAGCG------CGGCCG---GCCGGCGGAGCACTACGACGCGCTGGCCAGGGAGCTGGCCAGGCGCAAGGC------CCG
CGGGGGGAAGGCGCCGCGGCTGACGGCGACCCCACGCTACGCGTTCCCGGACCGGCTCGCGGCGCCGGCGCTCTCGACGG
GGGTCTTCGAGCGCATCCACGTCAGGTTCTACGACTACCCGGACTGCACGGCGTTCATCGAGGACGCGTGGGGCAGGTGG
ACGGCGGCGTACCCGGGCAGCAAGATCCACCTCGGCCTCACGGCGTCGGAGAACGCCAGCTGCTACCTGCACCCCAAGGC
GCTGTGGGGGATCACGATGCCGATCGTGCAGAAGGCGGCCAACTACGGCGGCGTCATGCTCTGGGACAGGTACTACGACG
TGGTGAACGTCCAGGACCACTACAGCAGCTACATCAAGAACTGGGCTTGAGCTCCGGCCA-----TCCTCCACGCATCGC
CTTGCGTGCTCCTCCCTTGGCAAACGCCACTAGCTCCTTAACTTGGTTGCGCGTGTGTGAATGGCAAGTAATCTGGTGTT
AATCGTCACTCTTGTGTGTTTGTGCAAGAATAAAGGGACGACAGTGCAGGGATAAGATAAAGAGACAGTACTACATTTCA
GGTTTGATCATGTTGTTCCCTGTGGATGCCACAATTATCTCCAGATTACTGCTTGATTACGCTTTGAAATGTAT------
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>chr5A_524
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-------------------------------------------------------------------AGTAAAGCAAAAC
GCAGAAAAGCAATACATGCTCAAGTGTTCTTTGGGTGAGTGGGAAAAGAACGGCATTGATGCGTGGACCTTCACCACGTT
GCATTGTTGGCTTGTTCTCGTCGTCTCGTCGGTCTCACTCGTCGACATGCATTTATTCCGGATTGCCGCGGCGGTGCTCC
ATTTCTCATCTCGTAACCTCCTCGATGTGCTTTTCAGCTCCGCTTAGTCATGTTATTTGTTATCCTACTACTCCTAGCGC
GATCAAGCTGAGTGCGCTTCCCATATGTGGAACGATTTCCCCATGAACGCCGGCAAGCCAGCTAAGTGAGCCCAGCTAAC
TTAGCCACCTATGGCCGCAACACACGGGGAGATATCGAAAGCCACCTAGCTGCACTCCCACATCTCGACTCGCGCCGTGA
TCAATAATCCATCTTCTA---TATATATAAAGCACATTCTAGCGAGCTAGCTAATTCGATCTTCA--GAGTAGGTAGTAA
TCAGAAATGGCGCTGGCACGCCGGAGTCCGGCCTCCTCCCTCCTGGTCATCGCCGCGGTTCTCTCCGTTCACGGCCTCCT
CCCCGCTCCGGCCGCCGCCACGGGCAAGACCGGCCAGCTCACCGTCTTTTGGGGCCGGAACAAGGACGAGGGCTCTCTCA
GGGAAGCCTGCGACGCCGG------CCTCTACACCGCGGTCATCATGTCCTTCCTCAACGTCTACGGCCACGGCAAGTAC
CGCCTCGACCTCTCCGGCCACCCGCTCGCCGGCATCGGGGGCGACATCAGGCACTGCCAGTCCATGGGCATCACCGTCTC
CCTCTCCATCGGCGGCTACGGCGGCGACTACGCGCTCCCGACCAACCGGTCCGCGCTCGACCTCGCCGACCACCTCTGGT
TCTCCTACCTCGGCGGCAGGCGCAGGGGCGTGCGCCGCCCGTTCGGCCGCGCGAGTCTCGACGGCGTCGACCTCTTCCTG
GAGCG------CGGCGG---GCCGGCGGAGCACTACGACGCGCTGGCGAGGGAGCTGGCCAGGCGCAAGGC------CCG
CGGGGGGAAGGCGCCGCGGCTGACGGCGACGCCGCGCTACGCGTTCCCGGACCGGCTCGCGGCGCCGGCGCTCTCGACGG
GGGTCTTCGAGCGCATCCACGTCAGGTTCTACGACTACCCGGAGTGCACGGCGTTCATCGAGGACGCGTGGGGCAGGTGG
ACGGCGGCGTACCCGGGCAGCGAGATCCACCTCGGCCTCACGGCGTCGGAGAAGGCCAGCTGCTACCTGCACCCCAAGGC
GCTCTGGGAGATCACCATGCCGATCGTGCAGAAGGCGGCCAACTACGGCGGCGTCATGCTCTGGGACCGGTACTACGACG
TGGTGAACGTCCAGGACCACTACAGCAGCTACATCAAGAACTGGGCCTGAGCTCCGGCCA-----TCCTCCATGCATCGC
CTTGCATGCTCCTCCCTTGGCAAACGCCTCTAGCTCCTTAATGTGCTTGCGCATGTGTAAATCGAAAGTAATCTGCTGTT
AATCGTCACTCTCGTGTGCT--TGCAAGAATAAAGGGACGACAGTGCAGTACATGGATAAACAGTTCATTTTAGAGGTTT
GGTTCAATCATGCTGTTCCCTGTGGATGTCACAATTATCATCAGATTACTGCTTGATTACGTTTTGAAATGTATGCCCCA
ACCACAGGTGCGTGCAATCAATAATCAACCCTTAGAGTATCTTCAACAGCCTCGCGGCGCGC-------TAAAAATGCGT
TTACATCATCGGAATGATGAGCTT-TTGCGCGGCGAAGAGCACTTGCTCGAGTGGCC-ACGGCAAATTATAGCACACGCG
AGCCGCTCCAATAGCCGCCGCAAAAAAAAA----CACG--CTTTC-AGCATAAACAATATATACACTCCAAACACAACCA
AGAAGATCAAACACAAACAAAATAAATCAATAATAAATAGTTCAATTTTATTATTACAACTCAAACAAATAGTTTATCTT
GCAATACAACAAATAGTTCAACAATATAACGTCAAACATACAAATCATGATGCTCTTTGTCGGCCATTCCATGCCTACCA
CTTCTGGATGAAATCCTTCTGAAGATCATCATGTGTTTCGGCACGTCGAATGACATGATAGAAGGCAACAAAACGAGCCA
CCCTCGCAGCCCTCCGCCGCACTCGCACGGGATGTCCCAAGAGCTCATATCGAAAGTAGTCTAAATCTTGGCCACGCTCA
TTCTCAATGATCATGTCGTGCATAATCACACAAGCGTGCATGATCCACCAAAGCATC-TTTTGAT-CCCAAATCTAGCCG
GCTCTCTCACAATGACAAATTGGGCTTGCAAAATCCCAAAAGCTCTCTCCACATCTTTCCTAGCCGCCGCCTGAGCATTG
TGGAAATCTAGATTTTTCTTACC---
>chr4B_1026
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-------------------------------CCTCC---CTCCTACTCATCGCGGCTCTTCTCTCCGCCGCAACCTTCCT
TGCCGTCCCGGCCGCGGCCACGGGGAAGACCGGCCAGGTGGCCGTGTTCTGGGGTAGGAACAAGAACGAGGGGTCCCTCC
GGGAGGCCTGCGACACCGG------CACCTACACCATCGCCATCATCTCCTTCCTCGACGTCTTCGGCCGCGGCAACTAC
CACCTCGACCTGTCTGGCCACGACGTCTCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCAAGAACATACTCGTCTT
CCTCTCCATCGGGGGCTTCGGCAACCAGTACTCCCTGCCCACCGCCCAGTCCGCGGCGGACGTCGCCAACTACCTCTGGA
ACGCCTACATGCTCGGCACCCGCAAGGGCGTCTACCGCCCGTTCGGAGACGCCTTCGTCGACGGCATCGACTTCTTCATC
GAGAA------CGGCGC---GCCGGCC---AACTACGACGAGCTGGCCAAGCGGCTATGGAACTTCAATAAGGACTTCCG
CGGCAGGACGCCGGTGCAGCTGACGGCCACGCTGCGGTGCGGCTACCCGGACCGGCACGTGGAGCGGGCGCTCGCCACGG
GGCTCGTCGGACGCATCTTCGTCAGGTTCTACGACGACGCCGACTGCGCCGCCAACTGGCAGCGACAGTGGGACAAGTGG
ACGGCGGCGTACCCTTCGGCGCAGATCTACCTCGGGCTGCCGGCGTCGGAGCAGAAGGTCGGTTACGTTCACCCAAAGAA
CCTCTACTACAGCGTCATACAGGTGGCGCAGAAGGCGGCCAACTACGGCGGCGTCATGGTGTGGGAACGCTAC-------
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>chr4A_1026
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-------------------------------CCTCC---CTCCTACTCCTCGCGGCTCTCCTCTGCGCCGCAACCTTCCT
TGCCGTCCCGGCCGCGGCCACGGGGAAGACCGGCCAGGTGGCCGTGTTCTGGGGTAGGAACAAGAACGAGGGGTCCCTCC
GCGAGGCCTGCGACACCGG------CACCTACACCATCGCCATCATCTCCTTCCTCGACGTCTTCGGCCGCGGCAACTAC
CACCTCGACCTGTCCGGCCACGACGTCTCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCAAGAACATCCTCGTCTT
CCTCTCCATCGGGGGCTTCGGCAACCAGTACTCCCTGCCCACCGCCCAGTCCGCGGCGGACGTCGCCGACTACATCTGGA
ACGCCTACATGCTCGGCACCCGCAAGGGCGTCTACCGCCCGTTCGGCGACGCCTTCGTCGATGGCATCGACTTCTTCATC
GAGAA------CGGCGC---GCCGGCC---AACTACGACGAGCTGGCCAAGCGGCTCTGGAACTTCAACAAGGACTTCCG
CGGCAGGACGCCGGTGCAGCTGACGGCCACGCCGCGGTGCGGCTACCCGGACCGGCACGTGGAGTGGGCGCTCGCCACGG
GGCTCGTCGGACGCATCTTCGTCAGGTTCTACGACGACGCCGACTGCGCCGCCAACTGGCAGCGACAGTGGGACAAGTGG
ACGGCGGCGTACCCGTCGGCGCAGATCTACCTCGGGCTGCCGGCGTCGGAGCAGAAGGTCGGTTACGTTCACCCAAAGAA
CCTCTACTACAGCGTCATACAGGTGGCGCAGAAGGCGGCCAACTACGGCGGCGTCATGGTGTGGGAACGCTACGAGGAC-
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>chr1A_1079
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-------CCGGCCGCGGCCATGGGAAAGACGGGCAACGTCTTCGTGTTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCC
GGGAGACCTGCGACACCGGAAGGTACACCTACACCACCGTCATCGTCTCCTTCCTCGACGTCTTCGGCCACGGCAGGTAC
CACCTCGACCTCTCCGGCCACGACGTCTCCGCCGTGGGCGCCGACATCAAGCAGTGTCAGTCCAACGGCATGTCCATATT
CCTCTCCATCGGGGGCTTCGGCGGCCAGTACTCCCTGCCGAGGCGCAGGTCCGCGGCGGACGTGGCCGACTACCTCTGGA
ACGCCTACATGCTCGGCACGCGCGCGGGCGTCCACCGCCCGTTCGGCGACGCCTACGTCGACGGCATCAACTTCTTCATC
GACGGTGCCGCCGGCGC---GCGGCCCGAAAACTACGACGAGCTGGCCAGGCGGCTATGGGACTACAACAAGGGCTACCG
TGCCAGGACGCCGGTGCAGCTGTCGGCGACGCCGCGGTGCGGGTACTCGGACAGGCGCGTGGAGCGGGCGCTCGCCACGG
GGCTCTTCAACCGGATCTTCGTCAGGTTCTACGACGAACCCCACTGCGCCGCTCACTTGGAGCAGGAGTGGGACAGGTGG
ACGGCGGCGCAACCGCACGCGCAGATCTACCTCGGCCTGCCGGCTTCGGAGCGGAAGGTCGGCTACGTGCACCCCAAGAA
CCTCCACGCTGTT---ATCTCGGTGGTGCAGAAGGCGGCCAACTACGGCGGCGTCGTGATCTGGGA--------------
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>chr1B_1088
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----------------GCCATGGGAAAGACGGGCAACGTCTTCGTGTTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCC
GGGAGACCTGCGACACCGGAAGGTACACGTTCACCACTGTAATCATCTCCTTCCTCGACGTCTTCGGCAACGGCAGGTAC
CACCTCGACCTCTCCGGCCACGACGTCTCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCACGGGCAAGCTCATCTT
CCTCTCCATCGGGGGCTTCGGCGGCCAGTACTCCCTACCGACCCGCAGGTCGGCGGCGGACGTGGCCGACTACCTCTGGA
ACGCCTACATGCTCGGAACCCGCAAGGGCGTCAGCCGCCCGTTCGGCGACGCCTACGTCGACGGCATCAACTTCTTCATC
GACGGTGCCGCCGGCGCGCGGCCGGAA---AACTACGACGAGCTGGCCAGGCGGCTCTGGGACTACAACAAGGCGTACCG
CGGCAGAACGCCGGTGCAGCTGTCCGCAACGCCGCGGTGCGGGTACCCGGACAGGCGCGTGGAGCGGGCGCTCGCCACGG
GGCTGTTCAACCGCATCTTCGTCAGGTTCTACGATGAACCCCGCTGCGCCGCCCACTTGGAGCAGGAGTGGGACAGATGG
GCGGCGGCGCAACCGCACGCGCAGATCTACCTCGGCCTGCCGGCTTCGGAGCGGAAGGTCGGCTACGTGCACCCCAAGAA
CCTCCACGCTGTT---ATGCCGGTGGTGCAGAAGGCGGCCAACTACGGCGGGGTCGTGATCTGGGAGCGCTACGAGGAC-
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>chr2D_1109
C-------------------------------------------------------------------------------
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--------------------------------------TGACGGTCTTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCG
GGGAGGCCTGCGACACCGG------CATCTACAACACCGTCATCATCTCCTTCTACAGCGTCTTCGGCCACGGCAGGTAC
TGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGCGCCGACATCAAGCACTGCCGGGGCAAGGGCATCGTCGTCCT
CCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCCGTCATCACAGTCCGCGGCCGACGTCGCCGACAACCTGTGGA
ACGCGCACCTCGGCGGCGGCCGCCGCGGCGTGTTCCGCCCGTTCGGCGACGCCGTGGTCGACGGCATCGACTTCTTCATC
GACCA------GGGCGC---GCCGGAC---CACTACGACGAGCTGGCCAGGCGTCTGTCCGGCTACAACCGGTACTACCG
CGGCGCGCCCGGGGTGCGGTTGACGGCGACGCCGCGGTGCGTGTACCCGGACTGGCACGTCCAGAGGGCGCTGGACACGG
GGCTGTTCGAGCGGATCCACGTCAGGTTCTACG-----------------------------------------------
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>chr2A_1115
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-------------------------------------------GTCTTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCA
GGGAGGCCTGCGACACCGG------CATCTACAACACCGTCATCATCTCCTTTTACAGCGTCTTCGGCCACGGCAGGTAC
TGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGCGCCGACATCAAGCACTGCCGGGGCAAGGGCATCGTCGTCCT
CCTCTCCATCGGCGGCGGCGGCACCCAGTACTCGCTGCCGTCCTCGCAGTCCGCGGCCGACGTCGCCGACAACCTGTGGA
ACGCGCACCTCGGTGGCGGCCGACCTGGCGTGTTCCGCCCGTTCGGCGACGCCGTGGTCGACGGCATCGACTTCTTCATC
GACCA------GGGCGC---GCCGGAC---CACTACGACGAGCTGGCCAGGCGTCTGTCCGGCTACAACCGGTACTACCG
CGGCGCGCCCGGGGTGCGGCTGACGGCGACGCCGCGGTGCGTGTACCCGGACTGGCACGTCCAGAGGGCGCTGGACACGG
GGCTGTTCGAGCGGATCCACGTCAGGTTCTACG-----------------------------------------------
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>chr2A_1115
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-------------------------------------------GTCTTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCG
GGGAGGCCTGCGACACCGG------CATCTACAACACCGTCATCATCTCCTTCTACAGCGTCTTCGGCCACGGCAGGTAC
TGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGCGCCGACATCAAGCACTGCCGGGGCAAGGGCATCGTCGTCCT
CCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCCCACCTCACAGTCCGCGGCCGACGTCGCCGACAACCTGTGGA
ACGCGCACCTCGGCGGCGGCCGACCCGGCGTGTTCCGCCCGTTCGGCGACGCGGTGGTCGACGGCATCGACTTCTTCATC
GACCA------GGGCGC---GCCGGAC---CACTACGACGAGCTGGCCAGGCGTCTCTCGGGATACAACAAGTACTACCG
CGGGGCGCCCGGGGTGCGGCTGACGGCGACGCCGCGGTGCGTGTACCCGGACTGGCACGTCCAGAGGGCGCTGGACACGG
GGCTGTTCGAGCGGATCCACGTCAGGTTCTACG-----------------------------------------------
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>chr6B_2188
AATATTTAGCA---------------------------------------------------------------------
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-----------------------------CTTTAGAGCATTTTCAACAGCGGTGTG-----C-------TAAAAAAGCGT
TTACAGCGCTGGAGTCGCGAGTTT-TTGCGCGGCGAGGAGCACTTGCTCCAGCAGCC-GCTGCAAAATATAGCGCGCGCA
AGCCGCTCCAGAAGCCGCTGCAAAAAAAA-TGCGCGCGCTCTCTC-AGCACAAACACCATATGCACTCCAAACACAACCA
AAAATATCAAACATAAACAAAAAAAATCAACAATAAATAGTTCAATTTTATTATTACAACTCAAACAAATAGTTTATCTT
GCAATACAACAAATAGTTTAATAATACAACATCAAACATACAAATCATGATGCTATTTGTCGGTCATTCCATGCCCACCA
CTCCTCGATGAGATCCTTCTGAAGATCATCATGCGTTTCGGCACGTCGAATGGCATGATAGGAGGCAACAAATCAGGCCA
CCCTCGTAGCCCTCCGCCGCACTCACACGGGATGTCCCAAGAGCTTATACTGAGAGTAGTCTAAATCTTGGCCACGCTCA
TTCTCGATGATCATGTTGTGCATGATCACACAAACGTGCATGATGTGTCAAAGCATTTTTTTTATCCCAAAATCTAGCCA
GTCCTATCACAATGACAGATTGGGCTTGCAAAATCCTAAAAGCTCTCTCCACATCTTTCCTAGCCGCCGCCTGAGCATTA
TGGAAATCAAGATTTTTCTTACCTTC
>chr7B_2198
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-----------------------------CCTTAGAGCATCTCCAACAGCCATGCTACGCGCGGTGCGTTAAAAAAGCGT
TTGCAGCACGCAGTTCGCGAGTTT-TTACGTTGCGCGGAACGCTTGCTCCAGCGGCC-GCTGCAAAGTTTAGCGCGCGCG
AGCCGCTCCAGCAGCCGCTGCAAAAAAAC-TGTGCGCG--CGCTCTCGCACAAATAACATATGCACTCCAAACACAATCA
AGAAGATCAAACACAAACAAAATAAATCAGCAATAAATAGTTCAATTTCATTATTACAACTCAAACAAATAGTGTATCTT
GCAATATACCAAATAGTTCAACAATACAACATCAAACACATAAATCATGATGCTCTTTGTTGGCCATTCCATGCCCACCA
CTCCTCGATGAGATCCTTCTGAAGATCATCATGCATTTCGGCACATCGAATGGCATGATATGAGGCAACAAAACGGGCCA
CCCTAGCAGCCGTGCGCCACACTCGCACGGGATGTCCCAAGAGCTCATACTGAGAGTAGTCCAAATCTTGGTCACGCTCA
TTCTCGATGATCATGTTGTGCATGATCACACAAGCGTGCATGATGTACCGAAGCATC-TTTTGATCCCAAAATCTAGCCG
GTCCTCTCACAGTAGCAAATTAGGCTTGCAAAATCCCAAAAGCTCTCTTCACATCTTTTCTAGCCGTCGCCTGAGCATTG
TGGAAATCAAGATTTTTCTTACCTTC
>chr1B_2198
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------CCTGACAGCATCTCCAACAGCAGCGCG-----T-------TAAAAAAGCGT
TTACAACACTGTAATCGTGAGTTT-TTACGTGACGAGGAGCGCTTGCTCCAGCGACCGGCTGCAAAGTATAGCGCGCATG
AGCCGCTACAGCATCCGCTGCAAAAAAAC-TGCGCGCG--CTCTC-AGCACAAACAACACATGCACTTCAAACACAACTA
AGAAGATCAAACACAAACAAAATAAGTCAACAATAAATAATTCAATTTTATTATTACAACTCAAACAAATAGTTTATTTT
GCAATATAACAAATAGTTCAACAATAGAACATCAAACATAGAAATCATGATGCTCTTTGTCTGCCCTTCCATGCCCACCA
CTCCTTGATGAGATTCTTCTGAAGATCATCATGCGTTTCGGCACGTCGAATGGCATGATAGGAGGCAACAAAACGGGCCA
CCCTCGCAGCCCTCTGCCGCACTCGCACGGGATGTCCCAAGAGCTCATACTGAGAGTAGTCTAAAACTTGGCCACGCTCA
TGCTCG-TGATCATGTTGTGCATGATCACACAAGCGTGCATGATGTACGAAAGCATC-TTTTGATCCCAAAATCTAGCCG
GTCCTCTCACAATGGCAAATTGGGTTTGCAAAGTCCCAAAAGCTCTATCAGCATCTTTCCTAGGCA---CCGGAGCATTG
TGGAAATCAAGATTTTTCTTACCTTC
>chr6A_2198
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-----------------------------CCTAAGAGCATCTTCAACAGCTGTGTGACGTGC-------TAAAAAATCGT
TTACAATGTTGTAGTCGTGAGTTT-TTGCGTGGCGAAGAGCACTTGCTTCAGCGGCC-GCTGGAAAGTATAGCGCGCACG
AGCCGCTCCAGTAGCTGCTGCAAAAAAAC-TGCGCATG--CACTCTAGCACAAACAATATATGCACTTCAAACAGAACCA
AAAAGATCAAACACAAATAAAATAAATCAACAATAAATAGTTCAATTTTATTATTACAACTCAAACAAATAGTTTATCTA
GCAATACAACAAATAGTTCAACAATACAACATCAAACATACAAATCATGATGCTCTTTGTCGGCCATTCTATGTCCACCA
CGTCTCGATAAGATCCTTCTGAAGATCATCATGCGTTTCAACACGTTGAATGGCATGATAGGAGGCAACAAATCAGGCCA
CCCTCGCAGCCCTCCGCCGCACTCGCAC-GGATGTCCCAAGAGCTCATACTGAGAGTAGTATAAATTTTGGCCACGCTCA
TTCTTGATGATCATATTGTGCATGATCACACAAGCATGCATGTTGTATCAAAGCATC-TTTTGATCCCAAAATCTAGCCG
GTCCTGTAACAATGGCAAATTGGGCTTGCAAAATTCCAAAAGCTCTCTCCACATCTTTCCTAGCCGCCGCCTGAGCATTG
TGGAAATCAAGTTTTTTTCTTACATT
>chr2D_2199
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------------------------------CTTAGAGCATCTCCAACAGCCGTGTGATGCGCAGTGCGCTAAAAAAGCAT
TTTCAGCGTGCTAATCGCGAGTTTCTTGCGTGGCAAGGAGCGCTTGCTCTAACGGCT-GCTGCAAAGTTTAGCGCGCGCG
AGCCGCTCCAGCAGCCGCTGCAAAAAAAACTGCACGCG--CGCCCTCGCACAAACAACATATGCACTCCAAACACAACCA
AAAAGATCAAACACAAACGAAATAAATCAACAATAAATAGTTCAATTTTATTATTACAACTCAAACAAATAGTTTGTCTT
GCAATAGAACAAATAGTTCAACAATACA-CATCAAACATACAAATCATGATGCTTTTTGTCGGCCATTCCATGCCCACCA
CTCCTTGATGAGATCCTTGTGAAGATCATCGTGTGTTTCGGCACGTCGAATGGCATAATAGGAGACAACAAAACGGGCCA
CCCTGGCAGCCCTCCGCCACACTCGCACGGAATGTCCCAAAAGCTCATACTGAGAGTAGTCTAAATCTTGGCCACGCTCA
TTCTCGATGATCATATTGTGCATGATCACACAAGCGTGCATGATGTACCAAAGCATC-TTTCAATCCCAAAATCTAGCCG
GTCCTCTCACAATGGCAAATTGGGCTTGCAAAATCCTAAAAGCTCTCTCCACATCTTTCCTAGCCGCCGCCTGAGCATTG
TGAAAATTAAGATTTTTCTTACCTTC
>chr4B_2199
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------------------------------CTAAGAGCATCTCCAACAGCCGCGCAATGCGCGGCGCGCTAAAAAAGCGT
TCGCAGCGCGCTATTCGCGAGTTT-TTGCGCGGTGGAGAGAGCTTGCTCCAGCAACC-GTTGCAAAGTTTAGCGCGCGCG
AGCCGCTCCAGCAGCCGCTGCAAAAAAAC-TGCGCGCGT--GCTCTCGCACAAACAACATATGCACTCCAAACACAACCA
ATAAGATCAAACACAAACAAAATAAATCAACAATAAATAGTTCAATTTTATTATTACAACTCAAACAAATAGTTTACCCT
GCAATAGAACAAATAATTCAACAATACAACATCAAACGCACAAATCATGATGCTCTTTGTTGGTCATTCTATGCCCACCA
CTCCTCGATGAGATCCTTTCGAAGATCATCATGTGTTTCGGCACGTCGAATGACATGATAGGAGGCAACAAAATGGGCCA
CCCTAGCAGCCCTCCGCCGCACTCGCATGGGATGTCCCAAGAGCTCATACTGAGAGTAGTCTAAATCTTGGCCATGCTCA
TTCTTGATGATCATGTTGTGCATGATCACACAAGCGTGCATGACGTACCAAAGCATC-TTTTGATCCCAAAATCTAGCTG
GTCCTCTCACAATAGCAAACTGGGCTTGAAAAATCCCAAAAGCTCTCTCCACATCTTTCATAGCCGCCGCCTGAGCATTG
TGGAAATCAAGATTTTTCTTACCTTC
>chr6D_2199
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------------------------------CTTAGAGCATCTCCAATAGCCGCGCTACGCGTAGCGTGCTAAAAAAGCGT
TTGCAGCGCGCGGTTCACGAGTTT-TTGCACGGCGCTGAGCGCTTGCTCCAGCGGCC-TCTCCTAAATTTAGCGCGCGTG
AGCCGCTCTAGCAGCCGCTGCAAAAAAAC-TGCGTGCG--CGTTCTCGCGCAAACAACATATGCACTACAAAAACAACCA
AGAAGATCAGACACAAACAAAATAAATCAACAATAAATAGTTCAATTTCATTATTACAACTCAAACAAATAGTTTATATT
GCAATAGACCAAATAGTTCAACAACACAATATCAAACGCACAAATCATGATGCTCTTTGTCGGCCATTCCATGCCCACCG
CTCCTCAATGAGATCCTTCTGAAGATCATCATGCGTTTCGGCACGTCGAGTGGCATGATAGGAGGCAACAAAACAGGCCA
CCCTGGCAGCCCTCCGCCGCACTCGCACGGGATGTCCCGAGAGCTCATACTGAGAGTAGTCTAAATCTTGGCCACGCTCA
TTCTCGATGATCATGTTGTGCATGATCACACAAACGTGCATGATGTACCAAAGCATC-TTTTGATCCCAAAATATAGCCG
GTCCTCTCACAATAAGAAATTGGGCTTGCAAAATCCCAAAAACTCTCTCCACATCTTTTCTAGCCGCCGCCTGAGCATTG
TGGAAATCAATATTTTTCTTACCTTC
>chr2D_2200
--------------------------------------------------------------------------------
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-------------------------------TTAGAGCATCTTCAACAGCCGCCCG-----CGGCGTGCT-AAAAAGCAT
TTGCAGCATGTTGTTCATGAGTTT-TTGCGCTGCGTAGAGCGCTTGCTCCAACGG-T-GCTACAAAGTTTAGTGCGCGTG
AACCGCTCCAGCAACCGCTACAAAAAAAC-TACGTGCG--CGTTCTCGCACAAACAACATATGCACTCCAAACACAAC-A
AAAAGATAAAACACAAACAAAATAAATCTACAATAAATAGTTCAATTTTATTATTACAGCTCAAACAAATAGTTTATCTT
GCAATAGAACAAATAGTTCAACAATACAACATCAAACGCACAAATCATGATACTCTTTGTCGGCTATTCCATGTCCACCA
CTCCTCGATGAGATCCTTCTGAAGATCATCATGCATTTCGGCACGTCGAATGGCATGATAGGAGGCAACAAAACGGGTCA
CCCTGGCAGCCCTCCGCCGCACTCGCACGGGATGTCCCAAGAGCTCATACTGAGAGTAGTCTAAATCTTGGCCACGTTCA
TTCTCGATGATCATGTTGTGCATGACCACACAAGCGTGCGTGATGTACCAAAGCATC-TTTTGATCCCAAAATCTAGCCG
GTCCTCTCACAATAGCAAATTGGGCTTGCAAAATCCCAAAAGTCCTCTCCACATCTTTTCTAGCCGTTGCCTGAGCATTG
TGGAAATCAAGATTTTTCTTACCTTC
>SNPs
SS---S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
-------------S---------------------S--------------S--------------------S--------
----S------S----S-------------------S-----S-----S----------S--------SS----------
-----------SS-----S--S--S----------S---S--S------S---S-----S-----------S--------
------------------------------------------------------------------S-------------
-----------------------------------S-S---S-------------S-------S-------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S-------S-
-SS-S-SS----------------SS------S---S-----------------------------------------S-
S-------S----------------------------------S------------------S-SSS-----S-------
---------------S-------------SS-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
----------------------------------------S--------------------------S----------S-
---------------------------------------------------------S----------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S--------------------------------------------------------SSSSS-------------S-
--------------------------------------------------------------------------------
-S----------------------------------------S----------S-----------------S--------
--------------------------------------------------------------------------S--S--
-----S---------------------S-------------------------------------S--------------
------------------------S-----------------------------------------------------S-
----------------------------S-S-S-----------------------------------------------
------------------------------------------S-------------------------------------
-------------------S---------------------------------------S--------------------
-------------------------------------S--------------S-S-------------------------
--------S--------------------------------------------------------------------S--
-----------------------------------S--------------------------------------------
-------------------------------------S------------------------------------------
--------------------------
>forward_961
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------ATCTCGACTCGCACCGTAA
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>reverse_1924
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---CGAACGTCCAGGACCACTAC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_1071
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TGACACGCCGGAGTCCTA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------
>reverse_1985
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------CTCCTCCACGCATCAC
CTTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
