>input_sequence_65896
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---------------------------------------------ATGATGGCGGAGACCAAGGCGGTGGCGTCTGCGGC
GG---CGGCGGAGGAGG---------------------------------------------------------------
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-------------------------------GAAAGAGCAAGACGGTGGTGCTGGTCGCCGTGGACGACAGCGACCACAG
CTACCGCGCGCTCGAGTGGGCCGTGCGGCACGTGGCGGCGACGGCCGGCGCGCCCGGCGCCCGGGCGGTGGAGCTAGTCG
TCGTCCACGCCAAGCCGTCCCCTTCCCCCGTGGTCACCATGGGCGGCCCCGGTGCGTTCGTTGTTAACCTCCT-------
CTT---TAATGCTTCATCGTTTCGCCCTCCGGAA------TCTGAGCGAGCTCTCCTCT---GACTGAGT------TCTG
CG----GATTCG------TTTCAGGCGTGTCCGGCGACGTGGTGAGGTTAGTGGAGGCGGACCTGCGCAAGAAAGCCGAG
GGCGTCGTCGACAAGGCGCGCCGCCTCTGCGTCGCCAACTCGGTAACAT-----CCGCTACCAA-CTCCGCTCGTCGCTC
GTTGTGATCTCCTTTCTACTATCTATCTGTCCATGGATAAACCAACTCGTCTCCCTTGCTGATATCTTTTCTATCTATCT
GTCC------ACGGAGAC----GATCACACATTGCATATCTGTGACCTGT---CGCTGCTTATACGAAACCGCAGGTGCA
AGGCGTGGTGGAGGTGGTCGACGGAGAGCCGAGGCACGTCCTGTGCAACGCCGTCGAGAAGCACCACGCTGATCTGCTCG
TCGTCGGCAGCCACGGCTACGGTGCCATCAAGAGGTCAGGTCCTTGATT-----TTCTACTGCAGTATACGTTCCATA-G
CGAGACTGAAACTAATGGTGACGGGCTTTTTGTCTGAACTCCTCT--TTCTCGCAGGGCATTGCTCGGGAGCGTGAGCGA
CTACTGCGCCCACCATGCGCACTGTTCTGTGATGATAGTCAAGCAGCCCAAGTCCAAGAACTGA----------------
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>chr2D_1_TraesCS2D01G113000
CAAAC---------------------------------------------------------------------------
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---------------------------------------------------------------------TGTCCAGTTTA
TTATGGAAAACCAGGCTAAACCATCACAA------AGCAACACACACAAGATACCCCACTCACACCACTATAAGGCCTCG
CTGAGACATCATGCATGCGTCATCGTCATCGCTCCTCCCCTATAAAGCACCATTGGCATCCTTAAACCCTAACCAAACGA
CTCCAACTTCGCCGTAGGCGATAGTCAAGTCAACCCACACTGTAGAGGCCATCTGAAGTGGTATGAAGATCCGCACTAGA
ACTCAGTCATTTGCAACCAGACAACGGAGCTCCGTCTCTGAAGGAGAACTACGAAGGAAAGACCAGGCAGGCTCGTTCCC
TGGAAGATTGGTTTCTCTTGATGAAGCTTATATCTACGCAATTTAGAAAATTACAATCGCATTTTTGATGAAGTTGTTCT
TTTCTACGATTGTACAAGAGTACACTAAAAAATTCCCGGCAAAGAAAAAAG----------AGTACACTAAAATTACACT
TTTCAGCGGGAAACTTAGAC-TAAA-ACAATTCTTGGATTACTTTTGGGATTTAACAAAACCAAATATCTTCTCAACCCG
CCAAAACAAAATACTCTTCTTCTTCTCACAAGACGAAGGTCGAAGGTGCCGCTCTCAAATTCTCTTCTGTCCCAAATCTC
AACACGCATCTCGAGTGCATCAGAAATCAGAACGCAC------CGACGGAAAAGAAACGACCACCATGC--------C--
CCCCGAACCGTCGCTGCCGTCGCCGCCCCCATCCA----AGCGGGCAGATGATGCATGCGAAGTGAAAAGCAACAGAACT
GAACGGAAACCGGGGGAGGTCTGCCGT------CATCAGCTCC----TGCCGGCCACCGGCCACACGCAACCGCGCCTCC
GGTTTCGCCAGCGTACGTTCCA------------CTCTCACACCCCCA---CCAACTGAGAGACGAGTAAGCT----ATA
TATAGGCC----TAGCCCGCG-GCCTTGAGCTAT--------AACCACTTGAACCAAGA--------------------A
ACCTTCTCTAATCAGTTTCACTCCTCGCGTCCTTCGATTGTCA-TATGATGGCGGAGACCAAGGCGGTGGCGTCTGCGGC
GG---CGGCGGAGGAGG---------------------------------------------------------------
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-------------------------------GAAAGAGCAAGACGGTGGTGCTGGTCGCCGTGGACGACAGCGACCACAG
CTACCGCGCGCTCGAGTGGGCCGTGCGGCACGTGGCGGCGACGGCCGGCGCGCCCGGCGCCCGGGCGGTGGAGCTAGTCG
TCGTCCACGCCAAGCCGTCCCCTTCCCCCGTGGTCACCATGGGCGGCCCCGGTGCGTTCGTTGTTAACCTCCT-------
CTT---TAATGCTTCATCGTTTCGCCCTCCGGAA------TCTGAGCGAGCTCTCCTCT---GACTGAGT------TCTG
CG----GATTCG------TTTCAGGCGTGTCCGGCGACGTGGTGAGGTTAGTGGAGGCGGACCTGCGCAAGAAAGCCGAG
GGCGTCGTCGACAAGGCGCGCCGCCTCTGCGTCGCCAACTCGGTAACAT-----CCGCTACCAA-CTCCGCTCGTCGCTC
GTTGTGATCTCCTTTCTACTATCTATCTGTCCATGGATAAACCAACTCGTCTCCCTTGCTGATATCTTTTCTATCTATCT
GTCC------ACGGAGAC----GATCACACATTGCATATCTGTGACCTGT---CGCTGCTTATACGAAACCGCAGGTGCA
AGGCGTGGTGGAGGTGGTCGACGGAGAGCCGAGGCACGTCCTGTGCAACGCCGTCGAGAAGCACCACGCTGATCTGCTCG
TCGTCGGCAGCCACGGCTACGGTGCCATCAAGAGGTCAGGTCCTTGATT-----TTCTACTGCAGTATACGTTCCATA-G
CGAGACTGAAACTAATGGTGACGGGCTTTTTGTCTGAACTCCTCT--TTCTCGCAGGGCATTGCTCGGGAGCGTGAGCGA
CTACTGCGCCCACCATGCGCACTGTTCTGTGATGATAGTCAAGCAGCCCAAGTCCAAGAACTGATCG----CCATTT-CC
GGAGTTA----GATCAATCGTGCCCAGTTCCAGTGTTGGGATTGTGCCATTTGCGTGCCTACACAATGTATCCCTACTAA
GTTATTTCTACTCCAAAGTTTACTCTTTTTTTTTTAATTTAGTCTGCATAT---TAGCAGTCAATCTGTGTAAACTTTCG
ATCAAATTTATAGAAAAAAGTTATTAAC--------------------------GTACACAATAGTAAATCAGTACGTTA
AATTCATCA----AATA-TATTTTCAC--ATTATATG--TGCTTGTTTTTGTAAACATTCATATTGTTTTCTACAAACTT
GATCAAATTTTATACAATTTGACTTACAACAAAGCTAA---GCAGAGTAAATAAAAACAG-----AAAGAACACTATTGG
TGCCACGCATGATGCTTGGG-TGTTCATCTTCTG-ATATCATCATAAATTTTTCGTTCTTCAAGAGACTCACCATTGAAT
GATCCCTCTCTTTTGATGAACTTTTTACGTCATTTTTAACT---------------------------------------
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------------------------TTCAAAAATGAAATATTTTTATATTAGTGTTTACTTGCATAAGACAACTGTTTTTT
GGTTGA---AAATAAACTTAGGCTAAAAATATTGTTAAAT----------------------------------------
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----------------------------------------------------------------AATGGCTTGATCTTTC
TATTAGTGTTTACTTGCATAAGACAACTAAAAATGGATCGTTGTAGACTTCACAAGAATTGCATTCACTTA------GCC
TAAAAATCTACTATACTCAGTCGGAAAAATTACAGTAGTATCAGTTC-AAAATGGAATAGACAC----ATTCCAACAATG
CAAGAGAGAGGGACGGGCAAAAATACCGTCAACCCAACATGAAAATTTAGTTGATTCCCGAAAAATTGTACACACTGTTA
TAGTTTTTTCTTCTTC---------TAAAAATACAATAGATATGAATGCAAAATGCAATCAAGAAAAAGGTTAATTCCA-
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---------------------------------------------------------AGGAATCTCGCTGAAACCAACAC
ACTGTGAAAGCAGATTCCAAATTGGATGCTCCATCTAA------------TAGTAGTGACTTTTTGAAGCACTTGAACCA
TCTTCTACT---CGCTTTAATTTT
>chr2A_1
CTCAACATGCATCTCGAGTGCATCACAAATCAACACGCACCAACGGAAAAGAAACGACCACCATGCCCCGATCCGTCGCT
GCGGTCGCCGTCGACATCCAGCGGGCAATAATGAGAATTGAAAAGCAACAAAGCTGAACGGGCAGCCCTGGCAGCTCTCG
CCGGTAACCGGCCACACGCAGCCGCGCCTCCGGCTTCACCGTCGTACGTGCCACTCGCACACCCACAATGCCGACTGACG
AGTAAGCTATATATAGGCCTGCCCGCGGCCTTGAGCTACATCTGCAAACCACTTCAAACCAAGAAACCTCCTCTAGTCAG
TTTTAATCCTCGCAACGTTCGATTGTCATATGATGGCGGAGACCAAGGCGGTGGCTGCTGCGGTGCCGGTGGAGGCGAGT
CCGGTGGAGGTGGGGAGGAGCAGGACGGTGGCTGCTGCGGTGCCGGTGGAGGCGAGCACGGTGGAGGTGGAGGTGGGGAG
GGGCAATACGGTGGCTGCTGCGGTCGAGACGAGTCCGGTGGAGGGGAGGAGCAAGACGGTGGCCGCTGCGGTGGAGGTGG
GGGAGGGGAGGAGCAAGACGGTGGTGCTGGTTGCCGTGGACGACAGCGACGCAAGCTACCGCGCGCTCGAGTGGGCCGTG
CGGCACGTGGCGGCGACGGCCGGCATGGCCGGCGCCGGAGCGGTGGAGCTCGTTGTCCTCCACGCCAAGCCGCCCACTTC
CCTCGCCGTCAACATGGGCGGCCCCGGTGCGTTAGCCTCCTCTTTAATGCTTCATCGTTTCGTCCTCTGGTCTGGACCCG
GACTGGAGCAAAGCTCTGTCGACTGAATTCTGGGGATTCGTTTCAGGCGTGCCCGGCGACGTGGTGGGGTTAGTGGAGGA
GGACCTGCGCAAGAAGGCCGAGGGCGTCGTCGGCAAGGCGCGCAGCCTCTGCGCCGCCAACTCGGTAACATAACATTGCT
CCATGGACAGATATAAGAGTCAGTAACAGAGACGATCACACATTGCATGGCTGTACGTAACTCGTGCCGCTTGCTTATTC
GAAACCGCAGGTGGAGGCTGTGGTGGACGTGGTCGACGGGGAGCCGAAGCACGTCCTGTGCGACGCCGTCGAGAAGCACC
GCGCCGATCTGCTCGTCGTCGGCAGCCAGGGCTACGGCGCCATCAGGAGGTACGCGTTCACCGCGTGACTGAAACTAATG
GTGACTGTCTCTTGTCTCAACTCCTCTTTTCTTGCAGGGCATTGCTTGGGAGCGTGAGCGACTACTGCGCACACCACGCC
GACTGCTCTGTGGTGATTGTCAAGCAGCCCGGGTCCAAGAACTGACCGCCATTTCCGGTGTTGGATCGATCCTGCCCAGT
TCCAGTGTTGGGAATTGTGCTATTTGCGTGCCTACACAATGTATCCCTGCTTAATTATTTCTGCTCCAACGAGTTTGTAC
TCTCTTTTATTCACTCTGCATAATATTAGCAGTCAAGCTTTGTAAACTTTAATTCAATTTATATTAAATAAATTAACATC
TACAATACCCAATCAGCACATTAAATTCTTCATTGAAATACATTTTCACATTAAATAGACTTGCTTTTGTAAACATCTGT
ATTGCTTTCTACAAACTTAGTCACGCTTTATATTGTTTGACTTACGACAGAGATAATATGCAAAGTAAATTACTCGCCAA
AAAATGCTAAGTAAATAAAACCGAAAGCCATAGATGATGCTTTCAGTGTTCATCCTCCGATCCGATATCATCATCAATTT
GCCCTTCTTCCAGAGACTTGCTATTCAATGATCCCTCTCCTTTGTTCCATTTTATGCAATCTTTTAGTTTCTAGTGGATC
TGCTTTTTGCGTCTAACGTGTTGTCAGCTAGCGCAGTCGCTCGTCGGCACTACATTGAATAATTGCATCGACGTCTGTTC
GTTATATCTCCTACTATTTATACTTAAATAAATAACACGTAAAGTTCCGTCACCCATTCTGTTGAAAAACAGTACTATCC
GTTCAAAAATGAAATATTTCATATTAGTGTTTACTTGCATAATAAGACAACTATATTTATGTTGAAAATAAACTTAGGCT
AAAAATCTTGTTAAATAACTGCTTCATGCTTTTATTAGTGTTTACTTGCATAAGACAACTAAAAAATGATTGTTGTAGAC
TTAACAAAAATGGTATTCACTTAGCCTAAAAATCTACTACACTTTGTCGGGAAAATACAATAGTATCAGTTCAAAAATGG
AATAGACACATTCCAACAATGCAAGAGAGCGGACAAAAATACCATAAACCCCATATGAAAATGTTGTTGATTCCAGAAAA
ATTGTACACATTGGTGTAGTTTTTTTAAAATCAACATTAGTGTAAAAATACAATAGATATTAATGCAAAATGCAATCAAG
AAAAATGTTATTTCAGAGGAATCTTGCTGAAACCAACACAACGTGAACACATGAGCTAAACCACTATCTAGGTTTCGGGC
TCTGGGCTTTTCTCTTGATGGATTTACTCAAATGTTTCTAATAGGGGTGCCCAAATAATCTTCTTGACAAATCAAACCGA
CTAGCGGACTATAACGGTAGGTGGGGGATGGCTATTTATAGCTAGAGCAGTCCCGAGGGTGAAACGACTATTTGGGGCCT
CGAGGCCAGTCAATGGTCAAACCGACATGTTTCCAACGGTCAGATTTCAAACGCACCTTTCAACTTTACTTGAGGAGCAA
GTAAAGTTAACTCCTCTACTAGAGCAATTCTCTCGCAACCGAGAAGAATATCATCTCTGGCTGGCAAGTAATTACTTTTC
GCATGAAGAGATTTCTCTCAACTCACTTGGATATTTTTAGGTTAAGCATCATAATAAAGACCAAAGGCTTGAAACATCGA
TCCCCTCTTAAAAGTACAGTGGTCCTATGACTCAATGGAAGAAAATGAGACTATGAAGAAAATGCACATCTTCACTTCGT
CTTCATTCTTCTTTGTTGTAGTCATTTTCTCTCGGATGCCTCGCGTACCAATTGCTTCGATTCAGCAACATTTTCTGGGA
GTCATCTCCGACACGCAATCACTTCGATGGCAATCTCCTCGATTGCCTTAGCGTTCTTATTTGCTTCATAGATAATAGTC
TTATAAGTTTATAGAAAGCTCCTTTGAACTCTAGGGACTGGTTGTGTGCACTAACAAACACATTATCCCCTCGCTGTTTC
CGTCCAACAGTCTTCAAAACTCTCGGAGCACTTGATTGCACCAATAGTTTGGAAGCCTTAATAACCATTTCAGAGCGAAC
ATTAACTACCGGGTTGAAGAGCAGGGAGAAATTGGCTTTCAATATTGTCAACGCCAACAATTATTTTTCCTGAAGTGACA
AGATTCCTTCATTCATTAAGAAGAAAAGAGTTGCTCGGTTAATTAGGAAAACCCGAGCGAAAACCAAAATGTCCAGTTTA
TTATGAAAAACCAGGCTAAACCATCACAACCGCTAAGCAACACACACAAGATACCCCACGCACACT------AGGCGTCA
TTGCGACAGCATGCAGGCATCATCGTCATCACTCCTCCCTTATAAAGCATCATCGGCATCCTTAAATCCTGAGCAAACGA
CTCCATCTTCGCCATAGGCGATAGTCAACTCAACCCGCACTGTAGAGGCCATCTGAAGTGGTATGAAGATGCGCACCAGA
ACTCAGTCATTTGCAACCAGACAACGGAGCTCCGTCTATGAAGGAGAATTACGAAGGACAAACCAGACGGGCTCATTCCC
TGGAAGATTGATTTCTCTTGATGAAGCTTATATCTACGCAATTTAGAAAATTACAATTGCATTTTCGATGAAGTTGTTAT
TTTCTACGATTGTAAAAGAGTACACTAATAAATTCCCTGCAAAAT---AAG----------AGTACACTAAAATTACACT
TTTCAGCGGGAAACTTAGACATAAA-ACAATTCTTGGATTACTT--GGGATTTAACAAAACCAAATATCTTCTCAACCCG
CCAAAACAAAATACTCCTCTTCTTCTCACAAGACGAAGGT-------GCCGCTCTCAAATTCTCTTCTATCCCAAATCGC
AACACGCATCTCGAGTGCATCTGAAATCAGCACGCAT------CGACGGAAAAATAAACGACCGCACCCATGCCATGC--
CCCCGAACCGTCGCTGCCGTCGCCGTCCCCATCCA----AGCGGGCAGATGATGCATGCGAAGTGAAAAGCAACAGAACT
GAACTGAAACCGTGGGAGCCCTGCCGT------CATCACCTCC----CGCCGGTAACCGGCCACACGCAACCGCGCCTCC
GGTTTCGCCACCGTACGTGCCCACCACTCTCAGTCTTTCACACCCCCAATGCCGACTGACAGACGAGCAAGCTAGCTATA
TATAGGCC----TAGCCCGCG-GCCTTGAGCTAT--------AACCACTTCAACCAAGA--------------------A
AACTTCTCTACTCAGTTTCAATCCTCGCGTCCTTCGATTGTTA-CATGATGGCGGAGACCAAGGCGGTGGCGTCTGCGGC
GGGTCCGGCGGAGGAGG---------------------------------------------------------------
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-------------------------------GAGGGAGCAAGACGGTGGTGCTGGTCGCCGTGGACGACAGCGACCACAG
CTACCGCGCTCTCGAGTGGGCCGTGCGCCACGTGGCGGCGACGGCCGGCGTGCCCGGCGCCCGGGCGGTGGAGCTCGTCG
TCGTCCACGCCAAGCCGTCCCCTTCCCCCGTGGTCACCATGGGCGGCCCCGGTGCGTTGTTAGTTAACCTCCT-------
CTTCTTTAATACTTCATCGTTTTGTCGTCCGGAG------TCGGAGCGAGCT------------CTGACTGAATTCTCTG
TG----GATCCG------TTTCAGGCGTGTCCGGCGACGTGGTGAGGTTAGTGGAGGCGGACCTGCGCAAGAAGGCCGAG
GGCGTCGTCGACAGGGCGCGCCGCCTCTGCGTCGCCAACTCGGTAACAT-----CCGCTACCAA-CTCCGCTCACGGCTC
GTCGC-------------------------------------------------ATTGCTCCATGGAA----------AA
GATATCAGTAAGGGAGAC----GATCACACATTGCATGTCTGTAACCTGT---TGCTGCTTGTCCGAAACCGCAGGTGCA
GGGCGTGGTGGAGGTGGTCGACGGGGAGCCGAGGCACGTCCTGTGCAACGCCGTCGAGAAGCACCACGCCGATCTGCTCG
TCGTCGGCAGCCATGGCTACGGCGCCATCAAGAGGT-----TCGC-ATT-----TTCTCCTGCAGTGTACGCTTTCGCCG
CGAG---------AATGGTGACGGGCTTTTTGTCTGAACTCCTCT--TTCTTGCAGGGCATTGCTTGGAAGCGTGAGCGA
CTACTGTGCCCACCATGCGCACTGCTCTGTGATGATAGTCAAGCAGCCCAAGTCCAAGAACTGATCGACCGCCATTT-CC
GGCGTTAGATCGATCGATCGTGCCCAGTTCCAGTGCCGGGATTGTGCGATTTGCGTGCCTACACTATGTATCCCCACTGA
GTTGTTTCTACTCCAAAGTTTG-TACCCCCTTTCTTATCTACTTTGCATAT---TGGCAGTCAAGCTATGTAAACATTTG
ATCAAATTTATAGAAAAACTTATTAACATACGCAATACTGT------------AC-CCGCAATACTAAACCAGTACGTTA
AATTCATCATTGAAATA-TCATTTCAC--ATTATATATATGCTTGTTTATGTAAACGTTTGTATTGCTTTCTATAAACTT
GGCCAAGCTTCATACATTTTGACTTATGACAGAGCTAATGTGCAAAGTAAATG-AAAACGGGAAAAAA---TACTATCAG
TGCCACACATGATGCTTGGG-TGTTCATCTTCTAAATGTCATCATCAACTTGCCCTTCTTCGAGAGACTGGCCATTCAAT
GATCCATCTCCTTTGTTGCATGTTTATGAAATTTTTAAGTTTC-------------------------------------
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>chr2B_340
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---------GGTTTATCTTGATGAAGCCTATATCTACGCAATTTACAAATTTACAATTGCATTTTTGATGAAGTTGTTCT
TTTCTACGATTGTACAAGAGTACACTAAAAAGTTCCCCGCAAAAA---AAGAAAGAAAAAGAGTACACTAAAATTATACT
TTTCAGCGGGAAACTTAGACACACAGACAATTCTTCGATTACTG--GGGATTTAACAAAACCAAATATCTTCTCAACCCG
CCAAAACGAAATACTCCTCTTCTTCTCACAAGACGAAGGT-------GCAGCTTTCAAATTCTCTTCTGTCTGAAATCTC
AACACGCATCTCGAGTGCATCAGAAATCAGCACGCAC------CGACGGAAAGGAAACGACCACCATGC--------C--
CCC-GAACCGTCGCTGCCGTGGCCGTCCCCATCCA----AGCGGGCAGATGATGCATGCGAAGTGAAAAGCAACAGAACT
GAACGGAAACCGGGGGAGCCCTGCCGT------CATCAGCTCC----CGCCGGTAACCGGCCGCACGCAACCGCGCCTCC
GGTTTCGCCAGCGTACGTGCCA------------CTCTCACACCCCCAATACCGACTGGCATACAACTAAGCT----ATA
TATAGGCCTAGCTAGCCCGCG-GCCTTGAGCAAT--------AACCACTTCAACCAAGA--------------------A
AA-------------------TCCTCGCGTCCTTCGATTGTTA-TATGATGGCGGAGACCAAGGCAGCGTCT------GT
GG---CGGCGGAGGAGG---------------------------------------------------------------
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-------------------------------GGAGGAGCAAGACGGTGGTGCTGGTCGCCGTGGACGACAGCGACCACAG
CTACCGCGCGCTCGAGTGGGCCGTGCGTTACGTGGCGGAGATGGCCGGCGCCGGGGCGC------CGACGGAGCTCGTCA
TCGTGCACGCCAAGCCGTCCCCTTCCCCCGTGGTCACCATGGGTGGCCCCGGTGCGTTGTTC-----ACCCCCTCTTTAG
CTT---TAATGCTTTATCGTTTCGCCCTCCGGAA------TCGGAGCGA-----CCTCT---GACTGACT------TCTG
CG----GATTCG------CTTCAGGCGTGTCCGGCGACGTGGTGAGGTTAGTGGAGGCGGACCTGCGCAAGAAGGCCGAG
GGCGTCGTCGACAGGGCGCGCCGCCTCTGCGTCGCCAACTCGGTAACAT-----CCGCGAGCA-------------GCTC
GTCGC-------------------------------------------------ATTGCTTCATGGACAGATTA------
----------------AC----AATCACATATTGCATGTCTGTAACCTGT---TGCTGCTTGTCCGAAACCGCAGGTGCA
GGGCGTGGTGGAGGTGGTCGACGGGGAGCCGAGGCACGTCCTGTGCAACGCCGTCGAGAAGCACCACGCCGATCTGCTCG
TCGTCGGCAGCCATGGCTACGGCGCCATCAAGAGGT-----TCTC-ATT-----TTCTCCTGCAGTGTACGCTTTCGCCG
CGAGACTGAAACTAATGGTGACGGCCTTTTTGTCTGCACTCCTCT--TTCTCGCAGGGCATTGCTCGGGAGCGTGAGCGA
CTACTGCGCCCACCATGCGCACTGCTCAGTGATGATAGTCAAGCAGCCCAAGTCCAAGAACTGATCG----CCATTT-CC
GGTGTTAGATCTATCGATCGTGCCCAGTTTCAGTGCTGGGATTGTGCGATTTGCGTGCCTACACTATGTATCCCCACTGA
GTTATTTCTACTCCAATGTTTG-TACTCCCTTTCATATCTACTCTGCATAT---TGGCAGTCAAGCTATGTAAACATTTG
AGCAAATTTATAGAAAAACTTATTAACATACGCAATACTATACCCGCAAAAAAAC-CCGCAATAGGAAACCTGTATGTTA
AATTCATCATTGAAATATTATTTTCACGTAT--TACATATGCTTGTTTTTGTAAACGTTTGTATTGTTTTCTATAAACTT
GGCCAAGCTTTATGCATTTTGACTCACGACAGAGCTAATGTGCAGAGTAAATG-AAAACAGGAAAAAAAAGTACTATCGG
TGCCACACATGATGCTTGGG-TGTTCATCTCCTG-ATGTCAACATCAACTTGCCCTTCTTCGAGAGACTGGCCATTCAAT
GATCCAACTCCTTTGTTGCATTTTTATGATTTTTTTAAGTTTCTAGTGGATCTGCTTTGTGCTTCAAATGGGTTGTCAGC
TAGGGCATTCGCTCATGGGCACTACATTGAATAACTGCTTTGATGTCTGTTCGTTATCGCTCCTACTCTCTCTGTAAACT
AATATAAACTGTTTCAAATCAGTATTTATACTTAAAAAGATAACACGTAAAGTTCTGTCATACATTTTGTCGAAAAATAC
AGTAGTACCAGTTCA-----------------------------------------------------------------
---------------------------AAAAATGAAATATTTTG-TATCAGTGTTTACTTGCATAAGACAACTAATTTTT
GTTGTCGAGAAAAAAGATTAGGTTAAAAATCCTATCAAAATTCATTCATTCTGAATCTTTTATCATATCGCTTATTACGG
CTATCTTTAGAATTTCATTGACTATATATGTTTCTTTCCATATGAGCTATTTCCTTTGCTTTCAATCTGTCTTGTGCCAC
TCCAGCTTTCACTCAAGCCATTATTTGCCTGTCGACCCTCACTCTTCCTCTTGCTTCCTTACATAACTGCTTCATGTTTT
TATTAGTGTTTACTTGCATACGACAACTGAAAAAAGATTGTTGTAGACTTAACAAAAATGGCATTCACTTAGAGATAGCC
TAAGAATCTACTACACTCTGTCGGG-AAAATACAGTAGTATCGGTTCAAAAATGGAATAGATACATTAATTCCAACAATG
CAAGAGAGC----CGGACAAAAATATTGTAAACCCACTATGAAAATGTAGTTGATTCCAGCAAAATTGTACATATTGGTT
AGTTTTTTTCCAGTACATGCTAGTGTAATATTACAATGGATACTAATGCAAAACACAATCAACAAAAAGGTTAATTCCGA
GTATACCCGACCATGGGCAGCCCGGCTTGGCCCGACGCTGCTCCTGGGCCGGGCTCGGGCCTAGATTTTGAGCCCGAAGG
CCGGGCCAGGCCCGGGCCCGCCGTTTTTTTACAATTTACCGAAGGGGCCTGGCCTGAGGCCCGGCGGGCTTTTACATGTA
TGGGCCGGGCTTGGGCTTGATTTTCTAGGCCCGACGTCCGGGTCGGGCCAGCCCCGGTTTTGGGTTTTCTGCGTAGGGGC
TTGGCTAGGCCCAGCCTAAAGCCCGGCCCGGCCGAGGGATGGCCAGATATACTTCCGAGGAATCTTGCTGAAACCAATAC
AATGTGAAAGCAGATTTCAAATTGGACGCTCCATCTAGTAGTAGTAGTACTAGTAGTGACTTTTTGAAGCACTTGAACCA
TCTTCTACT---CGCTTTAGTT--
>chr2D_599
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----------------------------------------CGAAGGCGCCGCTCTCAGATTATCTTCCAC-------CTC
AACATGCATCTCGAGTGCATCACAAATCAGCACGCAC------CAACGGAAAAGAAACGACCACCATGC--------C--
CCG-GA----------CCGCCGCCGTCGCCATCCAGCGGACAATA----------ATGAGAAGTGAAAAGCAACAAAGTT
GAACGGGCAGCCCTGG--------------------CAGCTCT----CGCCGGTAACCGGCCACACGCAGCCGCGCCTCC
CG-TTCACCAGCGTACGTGCCA------------CTCTCACACCCACAATGCCGACTG----ACAAGTAAGCT----ATA
TATAGGCCT-----GCCCGCAAGACTTGAGCTACA-----------ACTGCAAACCAAGAAACCTCCTCTAATCAACTTT
AA-------------------TCCTCGTAACGTTCGATTGTTA-TATGATGGCGGAGACCAAGGCGGTGGCT------GC
TG---CCGTGGAGGCGAGTCCGGTGGA---------------------------------------GGTGGAGGAGGGGA
GGAGCAAGACGGTGGCTGCTGCGGTGGAGGCGAGTCCGGCTCCGGTGGAGAAGGGGAGGAGCAAGACGGCGGCTGCTGAG
GTGGAGGCGGGTCCGGCGGAGGTGGAGGAGGGGAGGAGCAAGACGGTGGTGCTGGTCGCCGTGGACGACAGTGACGCAAG
CTACCGCGCGCTCGAGTGGGCCGTGCGGCACGTGGCGGCGACGGCCGGCATGGCCGGCGCCGGAGCGGTGGAGCTCGTTG
TCCTCCACGCCAAGCCGCCCACTTCCCTCGCCGTCAACATGGGCGGCCCCGGTGCGTTAG-------CCTCCT-------
CTT---CAATGCTTCATCGTTTCGTCCTTTGGTCTGGACTCCTACTGGAGCAAAGCTCTGTCAACTGAAT------TCTG
GG----GATTCG------TTTCAGGCGTGCCCGGCGACGTGGTGGGGTTAGTGGAGGAGGACCTGCGCAAGAAGGCCGAG
GGCGTCGTCGGCAAGGCGCGCAGCCTCTGCGCCGCCAACTCGGTAACATAACATCCACCACCAAGCTCTCC-----GCTC
GCCTC-------------------------------------------------ATTGCTCCATGGACAGATACAGAGAA
GATATCAGTGACAGAGAC----GATCACGCATTGCATGGCTGTACGTAAATCGTGCTGTTTATTCGAAACCGCAGGTGGA
GGCTGTGGTGGACGTGGTCGACGGGGAGCCGAAGCACGTCCTGTGCGACGCCGTCGAGAAGCACCACGCCGATCTGCTCG
TCGTCGGCAGCCAGGGCTACGGCGCCATCAGGAGGT-----CCTTGATTTTCTCTTCTCCTGCAGTGTACGCCTTCACCG
CGAGACTGAAACTAATGGTGGCTGTCTC-TTGTCTCAACTCCTCT--TTCTTGCAGGGCATTGCTTGGGAGCGTGAGCGA
CTACTGCGCACACCATGCCGACTGCTCTGTGGTGATTGTCAAGCAGCCCGGGTCCAAGAACTGATCG----CCATTT-CC
GGTGTTG----GATCGATCGTGCCCAGTTCCAGTGTTGGGATTCTGCTATTTGCGTGCCTACACAATGTATCCCTACTTA
ATTATTTCTGCTCCAACGTTTG-TACTCTCCTTTTTATTTACTCTGCATAT---TAGCAGTCAAGCTTTGTAAACTTT-G
ATTAAATTTATATTAAATAATATTTAAC--------------------------ATCCACAATACCCAATCAATGCATTA
AATTCACAATTAAAAT-TTATTTTCAC--AT--TAAATATACTTGCTTTTGTAAACGTTCATATTGTTTTCTATAAACTT
AGTAAAACTTTATATTGTTTGACTTACGACAGAGAAAA---AAAGATAATACGCA------GAGTAAAAAGTTTTATCAG
CACCATACACGATGCTATGG-TTG--------------------------------------------------TTCAAT
GATCCCTCTCCTTTGTTGCATTTTTATGTAATCTTTTAGTTTCTAGTGGATCTGCTTTTTACGTCTAACGTGTTGTCAGC
TAGCGCAGTCGCTCGTGGGCACTACATTGAATAATTGGTTCGACGTTTGTTCGTTATCTCTCCTACT-------------
-----------------------ATTTATACTTAAATATATAACACATAAAGTTCCGTCACACATTCGAA----------
---AGTATCAGTTCAAAAATGAAATGTTTTCTATTAGTGTTTACCTACTGTTTATACTTAAATATATAACACATAAAGTT
CCGTCACACATTTGAAAGTATCAGTTCAAAAATGAAATGTTTTC-TATTAGTGTTTACTTGCATAAAACAACTATATTTA
TGTTGA---AAATAAACTTAGGCTAAAAATCTTGTTAAAC----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AACTGCTTCATGTTTT
TATTAATGTTTACTTACATAGGACAACTAAAAAGAGATTCTTATAGACTTAACAAAAATGGTATTCACTTA------GCC
TAAAAATCTGCTACACTTTGTCAC-AAAAATACAGTAGTATCAGTTCAAAAATGGAATAGACAC----ATTCCAACAATG
CAAGAGAGC----CAGACAAAAATACCATAAACCCCATAGGAAAATGTAGTTGATTCCTGAAAAATTAT-CACATTGGTG
TAGTTTTTTTTAATCAACACTAGTGTAAAAATACAATAGATACTAATGCAAAACGCAATCAAGAAAAATGT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TATTTCAGAGGAATCTTGCTGAAACCAACAC
AACGTGAAAGTAAATTCCAAATTGGATGCTCCATCTAA------------TAGTAGTGACCTTTTGAAGCACTTGAACCC
TCTTCTTCTGCTCGCTTTAATT--
>chr2B_599
--------------------------------------------------------------------------------
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----------------------------------------CGAAGGCGCCGCTCTCAGATTATCTTCCAC-------CTC
AACATGCATCTCGAGTGCATCACAAATCAGCACGCAC------CAACAGAAAAGAAACGACCACCATGC--------C--
CCG-GA----------CCGCCGCCATCGCCATCCAGCGGGCAATA----------ATGAGAAGTGAAAAGCAACAAAGCT
GAACGGGCAGCCCTGG--------------------CAGCTCTGTCTCGCCGGTAACCGGCCACATGCAAGCGCGCCTCC
CG-TTCACCAGCGTGCGTGCCA------------CTCTCACGCCCACACTGCCGACTG----ACAAGTAAGCT----ATA
TATAGGCCT-----GCCCGCA-GACTTGAGCTAACATCTGCAAACCACTTCAAACCAAGAAACCTCCTCAG-TCAGTTTT
AA-------------------TCCTCGCGACGTTCGATTGTTA-TATGATGGCGGAGACCAAGGCGGTGGCT------GT
TG---CGGTGGAGGCGAGTCCGGTGGAGGTGGAGGAGGGCAGGAGCAAGACAGTGGAGGCGAGTCCGGTGGAGGAGGGGA
GGAGCAAGACGGTGGCTGCTGCGGTG---------------------GAGGAGGGGAGGAGCAAGACGGTGGCTGCTGCG
GTGG---------------------AGGAGGGGAGGAGCAAGACGGTGGTGCTGGTCGCCGTGGACGACAGCGACGCAAG
CTACCGCGCGCTCGAGTGGGCCGTGCGGCACGTGGCGGCGACGGCCGGCATGGCCGGCGCCGGAGCGGTGGAGCTCGTTG
TCCTCCACGCCAAGCCGCCCACTTCCCTCGCCGTCAACATGGGCGGCCCCGGTGCGTTAG-------CCTCCT-------
CTT---CAATGCTTCATCGTTTCGTCCTTTGGTCTGGACTCCGGCTGGAGCAAAGCTCTGTCGACTGAAT------TCTG
GG----GATTCG------TTTCAGGCGTGCCCGGCGACGTGGTGGGGTTAGTGGAGGAGGACCTGCGCAAGAAGGCCGAG
GGCGTCGTCGGCAAGGCGCGCAGCCTCTGCGCCGCCAACTCGGTAACATAACATCCACTACCAA-CTCTCC-----GCTA
GCCGC-------------------------------------------------ATTGCTCCATGGACAGATATAGAGAA
GAT-----------------------ATACATGCCATAGCTGTACGTAACTTGTGCTGCTTATACGGAACCGCAGGTGGA
GGCCGTGGTGGACGTGGTGGACGGGGAGCCGAAGCACGTCCTGTGCGACGCCGTCGAGAAGCACCACGCCGATCTGCTCG
TCGTCGGCAGCCAGGGCTACGGCGCCATCAGGAGGT-----CCTTGATTTTCTCTTCTCCTGCAGTGTACGCCTTCACCG
CGAGACTGAAACTAATGGTGGCTGTCTC-TTGTCTCAACTCCTCT--TTCTTGCAGGGCATTGCTTGGGAGCGTGAGCGA
CTACTGCGCCCACCACGCGGACTGCTCTGTGGTGATTGTCAAGCAGCCCGGGTCCAAGAACTGATCG----CCATTTTCC
GGTGTTG----GATCGATCGTGCCCAGTTCCAGTGTTGGGATTGTGCCATTTGCGTGCCTACACTATGTATCCCTGCCTA
ATTATTTCTGCTCCAACCGTTG-TATTCTCTCTGTTATTTACTCTGCATAATACTAGCAGTCGAGCTTTGTAAACTTT-G
ATTAAATTTATATTAATAGTGATCTAAATGATCTTATATTAGTTTACAGAGGGAGTACAATATACCCAATCAGCACAATA
AATTCATCGTTGAAATA-CATTTTCAC--AT--TAAATAGACTTGCTTTCGTATACGTCTGTATTGCTTTTTATAAACTT
AGTCAAACTTTATATTGTTTGACTTACGACAGAGATAATATGCAAAGTAAATG-AAACGG-----AAAGAATGCTATCGG
TGCCATACATGATTCTTTGGGTGTTCATCCTCTG-ATATCATCATCAATTTGCCCTTCTTCCAGAGACTTACCACTCAAT
GACCCCTCTCCTTTGTTGCGTTTTTATGTAATCGTTTTGTTTCTAGTGGATCTGCTTTTTGCGTCTAACGTGTTGTCAGC
TAGCGCAGTCGCTCGTGGGCACTACATTGAATAATTGCTTCGACATCTGTTCGTTATCTCTCCTACT-------------
-----------------------ATTTATACTTAAATAAATAACACGTAAAGTTATGTCACACATTCTGTT--AAAAAAC
AGTAGTATCAGTTCA-----------------------------------------------------------------
---------------------------AAAAATGAAATATTTTC-TATTAGTGTTTACTTGCATAAGTCAACTATATTTT
TGTTGA---AAATAAACTTAGGCTAAAAATCTTGTTAAAT----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GACCGCTTTATGTTTT
TATTAGTGTTTACTTGCATAAAACAACTAAGAAAAGATTGTTGTAGACTCAACAAAAATGGCATCCACTTA------GCC
TGAAAATCTACTACACTCTATCG-AAAAAATACAGTAGTATCGGTTCAAAAACGGAATAGACAC----ATTCCAACAATG
CAAGAGAGGGGAC-------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr2D_636
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-----------------------------------------------------------------------------CTC
AACACGCATCTGGAGGGCATCACCAATCAGCACGCACCGAAACCAAAGGAAAAGAATCAATCACCATGC--------ATG
CCCCGCGCCGTCGCTGTCGTCGCCGTCGCCATCCACTCCAGCGGGAAGATCACGATCGAGAAGTGGAAAGCCAGA-AACT
AAACGGAAACCGGGGCAGCGTGCCACCAGTATCCATTATCTCC----GGTCAGTCAGCGGCCACACGCCACTTGGCCACC
GCGGTTTCGTCGGTGCGCCTACT------------TCTCACATCCCATACGCCGATCGGCAGCAAGTAGCATCCAGCTCC
AGCTCACATAAATAGCCCGCG-GCCTGCAGCTCGGA-CGGCAAACCACATCAAACTG-GAAACCTTCTCTCATCATTTTA
AA-------------------TCATCGCGTCGTTGACTCTTGTGCATGATGGCGGAGACCGAGGCAGCGTCT------GC
GG---CCGCGGCGGC---------------------------------------GGAGGCGGGTCCGGCGGAGGAGGGGA
CGACCAA-------------------------------------------------------------------------
--------------------------------------CAAGACGGTGGTGCTGGTCGGCGTGGACGACAGCGACCACAG
CTACCGCGCGCTCGAGTGGGCCGTGCGTTACGTGGCGGAGACGGCCGGCGCCGGGGCGC------CGGTGGAGCTCGTCG
TCGTCCACGCCAAGCCGGCCGTGTCCTCCGTCGTCACCCTCGGCGGCCCCGGTACGCGCCGTCGGCGACCCCCTCCCTAG
-------------TAATTTTCTTGGCTATCTGAA------TCGGCCGGAGCG------------CTGATT------TCTG
GGGATCGATCGA------TTGCAGCCGCTGCAGGGGACGTGGTCAGGTACGTGGACGCGGACCTGCGCAGGAGGGCCGAG
GAGGTCGTCGACAGGGCTCGCCGCCTCTGCGCCGCCAACTCGGTAACATG--ATCCACTACCAA-TTCGAGAAGC-----
-----------------------------------GAGTAACAAGATCACGCCGATTGC----TGCTCTGCTTA------
----------------ATTACTAGTCACATGTGGAATCGAT-----------------------------TGCAGGTGCA
GGGTGTGGTAGAGGTGATCGACGGGGAGCCCAGGTTCGTGCTCTGCAACGCCGTGGAGAAGCACCACGCCGACCTGCTCG
TCGTCGGCAGCCATGGCTACGGCGCCATCAAGAGGT-----AATTGATTTATTCATCTCCATTCTCCAGCCCCCCGTGCT
GCAGAGCTAGTGGTCATGAG-------TTTTGTCTGAACCTGGGCAATTCTTGCAGGGCGTTTCTTGGGAGCGTGAGCGA
CTACTGCGCCCACCACGCGCACTGCTCGGTGATGATAGTCAAGCAGCCCAAACCCAAGGAATGATCGATCGCCATTT-CC
--------------------------------------------------------------------------------
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------------------------
>chr2A_1057
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--------------------------------------CAAGACGGTGGTGCTGGTCGGCGTGGACGACAGCGACCACAG
CTACCGCGCGCTCGAGTGGGCCGTGCGTTACGTGGCGGAGACGGCCGGCCCCGGGGCGC------CGGTGGAGCTCGTCG
TCGTCCACGCCAAGCCGGCCGTGTCCTCCGTCGTCACGCTCGGCGGCCCCGGTACGTGCCGTCCGCGACCCCCTCCCTAA
CTAATTCTTGCT--------------TATCTGAA------CCGGCCGGAGCG------------CTGATT------TCTG
GGGATCGGTCGATTTCACTTTCAGCCGCCGCCGGGGACGTGGTGAGGTACGTGGACGCGGACCTGCGCAGGAGGGCCGAG
GAGGTCGTCGACAGGGCTCGCCGCCTCTGCGCCGCCAACTCGGTAACAT-----CCACTACCAA-TTCCAGAAAC-----
-----------------------------------GAGTAACAAGATCACGCCGATTGCTGCATGCTCTGCTTA------
----------------AC----AGCCACATCTGGAATCGAT-----------------------------CGCAGGTGCA
GGGAGTGGTGAAGGTGATCGACGGGGAGCCGAGGTACGTGCTCTGCAACGCCGTCGAGAAGCACCACGCCGACTTGCTCG
TCGTCGGCAGCCATGGCTACGGCGCCATCAAGAGGT-----AACTGATTTATTTATCTCCATTCTCCAGTCCCCCGTGCT
GCAGAGCTAGTGGTCATGGA-------TTGTGTCTGAACCTGGGCAATTCTTGCAGGGCATTTCTTGGGAGCGTGAGCGA
CTACTGCGCCCACCACGCGCACTGCTCCGTCATGATAGTCAAGCAGCCCAAGCCCAAGGAATGATCG-------------
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------------------------
>SNPs
-SS-S---------------------------------------------------------------------------
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-----S-----------------------------------------------------S-----SSSSSSS----S--S
S--S----S------S--S-----------S--------S---------S---S------------S---S-S-------
-----S-------S--------------S-------S---------------------------------S-----S---
-------------------------------------S----------S---------S-S-----S-S-----S-----
---------------------------------------------------------S----------------------
-------------------------------------S-----S-SSS--------------------------------
--------------------------------------------SS----------------------------------
----------------S-----------------------------S---------------------------------
------------------------------S-------------------------------------------------
-------------------------S------------------------------------------------------
------------------SS---------------------------S-----S--------------------------
------------------S----------------------------------S-----S--------------------
--------------------------------------------------S-----------------------------
-S--------S---------S--------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
----------------------------------------------------SS--------------S-----------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------SS----
--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--SS---S-SS--SSSS-SS------SSSS--S-S----SS-SSS
-SSS---------------------------------------S---------S--------------------------
S-----------------------S--------------------------------------------S----------
-------------S--------S-------------SSSSS-----------------S-------S----S---S-S--
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--S------------S--------------------------------------------------------------S-
---------------------SS-S--S-S-----S-----S----------------------S--S----------S-
-------------------S-SS---------------------------------------------------------
------------------------------------S-------------------S----------------S------
-S-----S--------S----------S---S--------------------SS----S------------S-----S--
------S--------------------------------------S-----SS-S------S-------S------S---
----------S----S--S-S----SSSS-SS------SS----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------SS----------------------------S------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------SS----S--S---S
---------------------------------SS---S-----------S----S---S--------------------
-------------S----S----------S--------------------------------------------------
--------S--SS---S------------S-------S--------S-----------S---------------S--S-S
-----------SS-S---------------------------SS---------S------------------------S-
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-S------------------------------------------------------------------------------
----------------------SS
>forward_3539
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-------------------------------------------------------------------------------G
CTGAGACATCATGCATGCG-------------------------------------------------------------
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>reverse_5334
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-----------------------------------------------------CGCTGCTTATACGAAACCGC-------
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>forward_5213
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-------------------------------------------------------------------------GTCGCTC
GTTGTGATCTCCT-------------------------------------------------------------------
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>reverse_6969
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--------AGGGACGGGCAAAAATACCG----------------------------------------------------
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------------------------
