>input_sequence_65796
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-----------------GTTCGAATTCCCGCCGCG----CACGCGTCGCCTCCGGCCATGGGGTTCCCCCTGGTGTGCTA
CTGCGTCGCCATCCCCAAGCCGGTCATCGCCTTCTGCAAGCTCGTCGCCGCCGTCAGGGACGCCCTCCTCCTGCTGCTCT
CCCTCGTCGGCCTCTGCCGCTCCCCGCGCCGCTCTGTGGACGACGCCCCGCTGCCCGAGGAGGTCAAGGAGCGCCTCCCG
GCCGTCGAGTTCGGCTGCCTGGCGCGTCCGGCGCAGCAGCAGCAG------CACGACGGGGACGACGACGAGGTCGCCGC
CGCGGCGACGTGCATCGTGTGCCTGGAGAGGCTGTGGGCGACGGACGAGGTGCGGCGGCTGGGCAACTGCGCGCACGCCT
TCCACCGGGGCTGCATCGACGGGTGGATCGACCTCGGCCGGACCACCTGCCCGCTGTGTCGCTCCCACCTACTGCCTCGC
GCGCGGAGGGACGGCCCGCTCGCCAGCCTCCTCACGCGCGTTTGGTGACGACCAACCGCGCCAG------GTTAGCTCGA
AGGCCACGTCTTTCGTTTTCCCAGCGCGGTGGCGGCCGACACAGAGATTCGCGATCTCGACCGGCTGCATGTGTATTTAA
----TGTGGGTTTACATCATCTCAAAATTGGGATTTTATTTAGCTTATTA--TTAGGGCGCCACTTTGTATAGTAGCCAT
CCAATCACGAGGTCACCAATAGGTGCATACGCATAGTTTTTTCCCCCCGTAGAGAAGGATTCTTTGGTCGAACATATGTG
TACTAGCGTTTGGTTAGTGGATCTCGAAATGTCAACAGCTCCAAAACGCATGTTGCTGTTCGACTTGTACAATCCCAGTT
GTGGGACTACGACGTACAGTTGTA---TAACTCATACACTTATGCTTCAT--AAAAAAAGCTTGATGAT-----------
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----------------------------------------------------
>chr6B_1_TraesCS6B01G286500
CACGTCAATACAGGGCCCAATCGCGTGGCGAGAGAAATACACTAGAGGTCCTAAAAGTTTCTGGACAGTATCACCTTAGT
CCTA---CTTTTAAAATGCACGTTTAGGTCCTAATTCTATAGTAAGTGGTTCACCCGAGGTCCTTTTTTGCAGCATCGCT
CACTGACCTGCTCGGTTGCGCGTTGAACCATGCCAGGTCGACTTAAC---------------------------------
-------TTTTTGGCCGCTATCGTCCCGTAGCTATGTGATTTCCTCTACTCTGCCACAATCACTAGCTGTAGGCATTGAT
TTAGTTCGATTT--GCACTTTTTC-ATTAAGTTTCTTAAACCGCTTGCTCTGATTTGAGGTTAGGTGATAGGAGCTTGTG
GAGGAGGTGGTGCCGACGATGCTGCTGCAATGCTCCCCTT-CGTCACACGC--TTCCCTACCGAGGAGCTTACCGTCCCA
GCCATGGGGATGGTGTGGGCACGA-------GAGAGAG---------G-------GAGAG----------GATTCCGGT-
-------------AGGGGCTGGGAAATGTCAAGAGGGGGGG---TTAACAAGGGGCTTTATGTAAAAAAAGAGCAACCGC
AGCAGCC---------TATAAGTTGACATGGTG--T--G--GCTCAACTCGTCATGCGAGCAGGTCAGCAACCGCTCGTG
CAAAAAAAGGGCCTCGGATGAACCATTTACTATAGAATTAGGACCGAAACGTTCATTTTGAAAGAAGTGGGACTAAAGTG
ACACTGCGCAGAAACTTTTAGG-----------AC-----------GTTTCTCGCCTGGCGGTTGGGCCCTGTGTTGATG
TGGCGCGGGTCAACGCGCCACGCAGGCAGGTCAATGAGCGTTCGTGAAAAAAGAACCTCG-GATGAACCACTTACTAAAG
AATTAGGACCTAAATATGCATTTTGGAAGAATTGGGACTAAAGTGACACCCCAACAAAACTTTTAGGACCTCCGGTGCAT
TTAACTCTCATATATATGTATATATATACAGACATACATCCTCTCCTCCTCGTCCCGCCCGCAACAAACGACAGGCCTGG
CCGGCGCAGCCTGCAACGTTCGAATTCCCGCCGCG----CACGCGTCGCCTCCGGCCATGGGGTTCCCCCTGGTGTGCTA
CTGCGTCGCCATCCCCAAGCCGGTCATCGCCTTCTGCAAGCTCGTCGCCGCCGTCAGGGACGCCCTCCTCCTGCTGCTCT
CCCTCGTCGGCCTCTGCCGCTCCCCGCGCCGCTCTGTGGACGACGCCCCGCTGCCCGAGGAGGTCAAGGAGCGCCTCCCG
GCCGTCGAGTTCGGCTGCCTGGCGCGTCCGGCGCAGCAGCAGCAG------CACGACGGGGACGACGACGAGGTCGCCGC
CGCGGCGACGTGCATCGTGTGCCTGGAGAGGCTGTGGGCGACGGACGAGGTGCGGCGGCTGGGCAACTGCGCGCACGCCT
TCCACCGGGGCTGCATCGACGGGTGGATCGACCTCGGCCGGACCACCTGCCCGCTGTGTCGCTCCCACCTACTGCCTCGC
GCGCGGAGGGACGGCCCGCTCGCCAGCCTCCTCACGCGCGTTTGGTGACGACCAACCGCGCCAG------GTTAGCTCGA
AGGCCACGTCTTTCGTTTTCCCAGCGCGGTGGCGGCCGACACAGAGATTCGCGATCTCGACCGGCTGCATGTGTATTTAA
----TGTGGGTTTACATCATCTCAAAATTGGGATTTTATTTAGCTTATTA--TTAGGGCGCCACTTTGTATAGTAGCCAT
CCAATCACGAGGTCACCAATAGGTGCATACGCATAGTTTTTTCCCCCCGTAGAGAAGGATTCTTTGGTCGAACATATGTG
TACTAGCGTTTGGTTAGTGGATCTCGAAATGTCAACAGCTCCAAAACGCATGTTGCTGTTCGACTTGTACAATCCCAGTT
GTGGGACTACGACGTACAGTTGTA---TAACTCATACACTTATGCTTCAT--AAAAAAAGCTTGATGATTGTTTGCTGAC
CGAGTTTTAATTTTTTGGTTCCGTCTAGTACCTCAATTTGCAGTGGCCAATAGTGCGTGAGGGAGATTCTGGACACGAAC
ATGTGCACATTCCGCACCTTAGTTAAGTCTACACAGTTTGGAAAAGACAGAAGTCACCTTGTTTGATTGATTTTTAGCCC
TATATAAACCCCAACACAGTCACGTATGGCTCCACGGTATTAAGACCGAACATACAACATAGAACTATGAACGGGTTATC
CATTTCATCTGTTTCTCTGCT-------CCAATAATAGTCACCACACAACAGGAACCAACGGGAAG-----------AAC
CTCTAAATAATTCAATCCCATGGACTGCTGGTTTACATGGGAAGATCAACGGATGAA-ATCACTTA-TTTTGTGTAATCC
CACCAAACTTTGTTTAGGAGT---TACTAGCACATATGCCCGTGCGTTGCAGCAGGAGAAAAAATAGTGTGCATTTAAAT
TTAGTGAGAATTATACGTGCAAGCAAAACTTTGTGTGCACGTCAAGAAGGAACATTTAGGTTCTGGGTTTCGCCATATGT
GAAGTAATCAATCCGCTAACTTTCCGTTCATTGATCGAGGGGATTTAAGAATTTTGATACTCCCTCCATTCCTAAATATA
GGGTGTATAGTTTTTGGCACGGAAATTAAAGAACGCACATGGAGGAAAAATTTCACAAGTTTTGGGTGAGATTACACCTG
ACTAATTGGCATGAGTAAATAGAGGAGCTTACCTTATATAAGGAAATGTAATCAAATTCCTAAAAAAAAATATTCAAACG
AGTGGTGCAACTCAATGCACCTTATATTTCGGATTTTTTCTCAAAAATCTATACACCTTATATCAAGGAACGTAGGGAGT
ATTTTTTAAGAAACACATGTAATTTTATTCAGAATCATAACAATTACAAGTACACTGATTTGAATCTAAGCTTCAAGAAA
GTACAAAGTAACTCCTCCGTCGGGGCGGGCGTGACCCTTGGGGGAGGTGGCC
>chr5A_1
CACGTCAACACAGGGCCCAATCACGTGGCGAGAGAAATACACTAGAGGTCCTAAAAGTTTCTGGGCAGTATCACCTTAGT
CCTACTTCTTTTAAAATGCACGTTTAGGTCCTAATTCTATAGTAAGTGGTTCACCCGAGGTCCTTTTTTGCAGCATCGCT
CACTGACCTGCTCGGTTGCGCGTTGAACCATGCCAGGTCGACTTAAC---------------------------------
-------TTTTTGGCCGCTATCGTCCCGTAGCTATGTGATTTCCTCTACTCTGCCACAATCACTAGCTGTAGGCATTGAT
TTAGTTCGATTT--GCACTTTTTC-ATTAAGTTTCTTAAACCGCTTGCTCTCATTTGAGGTTAGGTGATAGGAGCTTGTG
GAGGAGGTGGTGCCGACGATGCTGCTGCAATGCTCCCCTT-CGTCACACGC--TTCCCTACCGAGGAGCTTACCGTCCCA
GCCATGGGGATGGTGTGGGCACGA-------GAGAGAGGGAGAGGATTCCGGTAGG------------------------
----------------GGCTGGGAAATGTCAAGA-GGGGGG---TTAACAAGGGGCTTTATGTAAAAAAAGAGCAACCGC
AGCAGCC---------TATAAGTTGACATGGTG--T--G--GCTCAACTCGTCATGCGAGCAGGTCAGCAACCGCTCGTG
CAAAAAA--GAGCTCGGGTGAACCATTTACTATAGAATTAGGACCAAAACGTTCATTTTGAAAGAAGTGGGACTAAAGTG
ACACTGCGCAGAAACTTTTAGG-----------AT-----------GTTTCTCGCCTGGCGGTTGGGCCCTGTGTTGATG
TGGCGCGGGTCAACGCGCCACGCAGGCAGGTCAATGAGTGTTCGTGAAAAAAGGACCTCGG-GTGAACCACTTACTAAAG
AATTAGGACCTAAATATGCATTTTGGAAGAATTGGGACTAAAGTGACACCCCGACAAAACTTTTAGGACCTTCGGTGCAT
TTAACTCT------------------------------------------------------------------------
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----------------------------------------------------
>chr4D_1
CACGTCAACAAAGGGCCTAATCGCTTGGCGGAAAAAATACATGAGAGGTCCTAAAAGTTTCTGGGCGGTGCCACTTTAGT
CCTACTTCTTTCAAAATGCACGTTTAGGTCCTAATTCTATAGTAAGTGGTTCAACCGAGGTTTTTT---GCATGATCGCT
CGCTGACCTGCTCGGTTGCGTGCTAACCCATGCCACGTTGACTTAGGGTCAATAGCAGATGAGGAACATTG----AAAAA
AACTATTTTTTTGGCCGCTATCGTCCCGTAGCTATGTGATTTCCTCCACTATACCACAATCACTAGCTATAGGCATTGAT
TTAGTTCAGTCT--GCACTGATTC-ATTAAGTTTCTCAAACTGCTTCC-CTTATTTGAGGTTAGGTGGTAGGAGCTTGTG
GAGGAGGCGGCGCTGACGATGATGATGTGATGCTTCTCTT-TGTCACCCGC--TTCCCTGTCGAGGGGCTTGCTATCCCA
GCCATGGCAACGGTGTGGGCACGA-------GAGAGAG---------A-------GAGAGAGAG------GATTTCGGT-
-------------AGGGGTTGGGAAATGTGAAGA-GGGGGG---GTTACAAGGGGCTTTCTGTAAAAAAAGAGCAACCTC
AGCAACC---------TCTAAGTTGACGTG--G--TGTG--GCTCAACACCTCACGCAAGCAGGTCAGCAACCGCTCGTG
C-AAAAAAGGACCTCGGGTGAACCAATTACTATAGAATTAGGACCTAAATGTCCATTTTGAAAAAAGTAGGACTAAAATG
ACACTGCCCAGAAACTTTTAGG-----------AC-----------GTTTCTCGCCTGGCGGCTGGGCCCTCTGTCGATG
TGGCATGGGTCAACGCGCCATGCAGGCAAGTCAATGAGTGCTCGTGAAAAAAGGACCTCGGGATGAACCACTTACTAAAG
AATTAGGACCTAAATATGCATCTTGTAAGAATTAGGACTAAAGTGACATCCC-ACAAAACTTTTAGGACCTCCAGTGCGT
TTAACTCTATTTAT------------------------------------------------------------------
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----------------------------------------------------
>chr2D_1
CACATCAACAGAGGGCCCAATCGCCAGGCAAGAAAAATACACTGAAGGTCCTAAAAGTTTCTGGACAGTGTCACTTTAGT
CCTACTTCTTTCAAAATGCACGTTTAGGTCCTAATTCTATAGTAAGTGGTTCACCCAAGGTCTTTTT-TGCACAATAGCT
CACTGAACTGCTCGGTTGCGCGTTGACCCATGCCACGTCGACTTAGGGTCAATAGCAGATGAGGAACATTGC--CAAAAA
AACCTATTTTTTGGCCGCTATGGTCCCGTAGCTATGTGATTTCCTCCACTCTTCCACAATCACTAGCTGTAGGCATTGAT
TTAGTTCAATTT--GCATTGTTTC-ATTAAGTTTCTCAAATTGCTTGCCCTGATTTGAGGTTAGGTGGTAGGAGCTTGTG
GAGGAGGCGACGCCGACGATGCTGCTGCAATGCTTCTCTT-CGTCACCCGC--TTCCTTGTTGAGGAGCTTGCTATCCCA
GCCATGGCGATGGTGTTGCCACGA-------GAGAGAG---------A-------G------------------------
----------------GGCTGGGAAAAGTGAAGA-GGGGGG---TTTATAAGGGGCTTTCTGT-AAAAAAGAGCAACCAC
AGCAACC---------TCTAAGTTGACATG--G--T--GTGGCTCAACACGTCATGCGAGCAAGTCAGCAACCGCTCATG
C-AAAAAAGTACCTTGGGTGAACCACTCTCTATAGAATTAGGACTTAAATGTTCATTTTGAAAGAAGTAGGACTAAAGTG
ACACTATCCAAAAACTTTTAGG-----------AG-----------ATTTCTCTCCTGGCGGCTGGGCCCTCTGTCGATG
TGGCGTGGGTCAACGCACCACGCAGGCAGGTCAATGAGCGCCCGTGAG-AAAGGACCTCAC-GTGAACCACTTACTAAAG
AATTAGGACCTAAAGGTGCATTTTGAAAAAATTAGGACTAAAGTGACACCCCGACAAAACTTTTAGGACCTCCAGTGCAT
TTAACTCTC-----------------------------------------------------------------------
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----------------------------------------------------
>chr3A_1
CACGTCAACAGAGGGCCCAACCGGCTGGCAAGAAAAATACATTGGTGGTCCTAGAAGTTTCTGGGCGGTGTCACTTTAGT
CCTTCTTCTTTCAAACTGCATGTTTAGGTCCTAATTCTATAGTACGTGGCTCACCCGACGTCCTTTTCCGCATGATCATT
CACATACCTGCTTGGTTGCGCGTTGAC-----CCACGTCCATTTAGGGTCATTAGCAGATGAGGAACATTGCGT------
---------------CGTTATCGTCCCGTAGCTATGTGATTTCCTCTACTCTGCCACAATCACTAGCTGTAGGCATTGAT
TTAGTTCGATTT--GCACTG-TTTTATTAGGTTCCTCAAACCTCTTGCTTTGATTTGGGGTTAGGCAGTAGGAGCTTGTG
GAGGAGGCAGCGCTGCCGACGCTGCTGCAACGCTCCTCTT-CGTCACACTCCTTTCCTTGTCGAGGAGCTTGATGCCCCA
ACCATGGTGACGAGAGAGA---GA-------GAGAGAG---------A-------GAGA--------------TATGGT-
-------------AGGGGTTGGGAAATGTCAAGA-GGGAGG---GTTACAAGGGGCTTTTTGTAAAAAAAA--------C
AGCAACC-------------------------------------------------------------------------
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----------------------------------------------------
>chr7B_13
------------GGGCCCAATCGCCAGGCGAGAGAAATACACTGGAGGTCCTGAAAGTTTCTATGCAGCATCACCTTAGT
CCTACTTCTTTCAAAATGCACGTCTAGGTCCTAATTCTATAGTAAGTGGTTCACCCGAGGTCCTTTTCTGCACGACCGCT
CACTGACCTATTTGGTTGTGCATTGACCCATGCCACGTCGACTTAGGGTCACTAGCAGATGACGAACATTGCAACAAAAA
AACCTATTTTTTG-------------------------------------------CAATCACTAGCTGTAGGCATTGAT
TTAGTTCAATTT--GCACTGTTTC-ATTAAGTTTCTCAAACCGCTTGCTCTGATTTGAGGTTGGGTGATAGGAGCTTGTG
GAGGAGGAGGCG-------TGCTGCTGCAATGCTCCCCTTCCGTCACCCGC--TTCCCTGTCGAGGAGCTTGTTGTCCTA
GCCATGGCGATGGTGTGGGCACGA-------GAGAGAG---------A-------GAGAGAGAGAGAGAGAGAGAGAAGA
GAGAGAGAGAGAGAGAGGCTGGGAAATGTCAAGA-GGGGTT---TTTACAAGGGGCTTTCTGTAAAAAAAGAGCAACCAC
GGCAGCC---------TCTAAGTTGACATG--G--T--G--GCTCAACGCGTCACGCGAGTAGGTCAGCAATCACTCGTA
C-AAAAAAAGACCTCGGGTGAACCATTTACTACAGAATTAGGACCTAAACATGCATTTTGAAAGAAGTAAGACTAAGGTG
ACACTACCCAGAAACTTTTAGG-----------AC-----------GTTTCTCGCCTGGCGGATGGGCCCTGTGTTGATG
TGGCATGGGTCAACGCGCCACGCAGGCAGGTCAATAAGCGCTCGTGAAAAAAGGACCTCGG-GTGAACCGCTTACTAAAG
AATTAGGACCTAAAGGTGCATTTTGGAAGAATTAGGACTAAAGTGACACCCCGACATAACTTTTAGGACCTCTAGTGCAT
TTAACTCT------------------------------------------------------------------------
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>chr1A_201
TA------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----ATTTTTTCACCACTATCATCCCGTAGCTATGTGATTTCCTCTACTCTGCCACAATCACTAGCTGTAGACATTGAT
TTAGTTCAATTT--GCACTG-TTC-ATTAAGTTTCTCAAACCGCTTGCTCTGATTTGAGGTTAGGTGGTAGGAGCTTGTG
GAGGAGGTGGTGCCGACGATGATGCTGCAATGCTCCTCTT-CAACACCCGC--TTCCCTACCGAGGAGCTTGTTGTCCTA
GCAATCGCGACGATGTGGGCATGAGAGGGGGGAGAGAG---------A-------GAGAGAGAG------GATGTCGGT-
-------------AGGGGCTGGGAAATGTCAACA-GGGGGG---TTTACAAGGGGCTTTCTGTAAGAGAAGAGCAACTGC
AGCAGCC---------TCTGAGTTGACATG--ATGT--G--TCTCAACGCATCACGCAAGCATGTCAACAACCGCTTGTG
T-AAAAAAGGACCTCAGGTGAACCACTTACTATAGAATTAGGACTTAAATGTGCATTTCGAAAGAAGTAGGACTAAAATG
ACACTGCCCAAAAACTTTTAGG-----------AC-----------GTTTCTTGCCTCGCGGTTGGACCCTGTGTCGATG
TGCCGTGGGTTAGCGCGCCACGCATGCAGGTCAATGAGTGCTCGTGAAAAAAGGACCTCGG-GTGAACCACTTTCTAAAG
AATTAGGACCTAAAGATGCATTTTGAAAGAATTGGGACTAAAGTGACAACCCGACAAAACTTTTAGGACCTTCAGTGCAT
TTAACTCT------------------------------------------------------------------------
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----------------------------------------------------
>chr3D_201
TA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----ATTTTTTCACCGCTATCTTCTCGTAGCTATATGATTTCCTCTACTCTGCCACAATCACTAGCTGTAGGCATTGAT
TTAGTTCTATTTTTGCACTGTTTC-GTTAACTTCCTCAGACCACTTGCTTCGATTTGGGGTTAGGCGGTAGGACCTTGTG
GAGGAGGCATCACTGCTGACGCTGCTGAAACGCTCCTCTT-CGTCACCCGC--TTCCCTGCCGAGGAGCTTCCTCACCCA
GCCATGGCAACAGTGCGGGCACGA-------GAGAGAG---------A-------GAGA--------------TTCGGT-
-------------AGGGGTTTGGAAATGTCAAGA-GGGGG----GTTACAAGGGGCTTTCTGTAAAAAAGGAG-------
----------------GCAAAGTTGACGTG--GCAT--G--GGTCCACACATCACGCAAGCAGGTCAGCGAAAGATCGTG
C-AAAAAAGGAGCTCACGTGAACCACTTACTATAGAATTAGGATCTAAACGTGCATTTTGAAAGAAGCAGGACTAAAGTG
ACACTGCCCAGAAACTTTTAGG-----------ACCTCTAGTGTATTTTTCTCGTCTGGCGGTTGGGCTCTCTGTCGATG
TGGCATGGGTCAACGCGCCACGTGGGCAGGTCAATGAGCGCTCGTGAGAAAAGGACCTCAC-ATGAACCACTTACTAAAG
AATTAGGACCTAAAGGTGCATTTTGGAAGAATTAGGACTAAAGTGACACCACCACGAAACTTTTAGGACCTCTAGTGCAT
TTAAATC-------------------------------------------------------------------------
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----------------------------------------------------
>chr3D_201
TA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----ATTTTTTCACCGCTACCGTCCCGTAGCTATGTGATTTCCTCTACTCTGCAACAATCACTAGCTGTAGACATTGAT
TTAGTTTGATTT--GCACCATTTC-GTTAAGTTTCTCAAACCGCTTGCTTCGATTTGGGGTTAGGCGGTAGGAGCTTGTG
GAGGAGGCATCAGTGCCGACGCTGCTGAAACACTCCTCTT-CGTCACCCGC--TTCCCTGCCGAGGAGCTTGCTGCCCCA
TCCATGGCAACGGTGCGGGCACGA-------GAGAGAG---------A-------GAGAGA------------TTCAGT-
-------------AGGGGTTGGGAAATGTCAAGA-GGGGGA---GTTACAAGGGGCTTTCTGTAAAAAAAG--------G
AG--------------GCAAAGTTGATGTG--GCAT--G--GGTCCACGCATCACGCAAGCAGGTCAGCGAAACATCGTG
C-AAAAAAGGAGCTCGCGTGAACCACTTACTATAGAATTAGACTCTAAACGTGCATTTTGAAAAAAGCAGGACTAAAGTG
ACACTGCCCAAAAAAATTTAGG-----------ACCTCCAGTGTATTTTTCTCGCCTGGCGGTTGGGCCATCTGTCGACG
TGGCGTGGATCAACACGCCACGTGGGCAGGTCAATGAGCGCTCATAAGAAAAGGACCTCAC-ATGAACCACTTACTAAAG
AAGTAGGACCTAAGGGTGCATTTTGGAAGAATTAGGACTAAAGTGACACCACGACGAAACTTATAGGACCTCTAGTGCAT
TTAAATCT------------------------------------------------------------------------
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----------------------------------------------------
>chr4B_201
TA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----AATTTTTTGCCGCTATCATCGCGTAGCTATGTGATTTCCTCTACTCTGCCACAATCACTAGCTGTAGGCATTGAT
TTAGTTTGATTT--GCACTATTTC-GTTAAGTTCCTCAAACCGCTTGCTTCAATTTGGGGTTAGGTAGTAGGAGCTTGTG
GAGGAGGCAGCGCTGCTGACGCTGCTGCAATGCTCCTCTT-TGTCACCCGA--TTCCCTGCCGAGGAGCTTGCTGCCCCA
GCCATGG-AATGGTGTGGGCACGA-------GGGA--G---------A-------GAGAGA------------TTCAGT-
-------------AGGGGTTGGGAAATGTCAAGA-GGGGGGTGGGTTACAAGGGGCTTTTTATAAAAAAAGAGCAACCAC
AACAGCC---------TCTAAGTTGATGTG--GCAT--G--GGTCAACGCGTCACGCAATCAGGTCAGTGAAAGATCGTG
C-AAAAAAGGACCTTGCTTGAACCACTTACTATAGAATTAGGATCAAAACTTGTATTTTGAGACAAGTAAGACTATAGTG
ACACTGCCGAGAAACTTTTAGG-----------ACCTCCAATGTATTTTTCTCGCTTGGCGGTTGGGCCCTCTATCGACG
TGGCATGGGTCAACACGCCACGCAGGTAGGT-------------------------------------------------
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----------------------------------------------------
>chrUn_216
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TATCGTCCCGTAGCTATGTGATTTCCTCTACTCTACCACAATCACTACTTGTAGGCATTGAT
GTAGTTCGATTT--GCATTGTTTC-ATTAAGTTTCTGAAATCACTCTCTCTGATGTGAGGTTAGGTGATAGGAGCTTGTG
GAGGAAGCAGCGCCACCGACGATGTTGCAATGCTCCTCTT-CGTCACCCGC--TTCCCTGCCGAGGAGCTCGCTGCCCCA
GCCATGGCGACGGTGTGGGCACTA-------GAGAGAG---------A-------GAGA--------------TTCAGT-
-------------AGGGAA-GGGGAATGTTAAGAGGGGGGG---TTTACAAGGGGCTTTCTGTAAAAAAAA--------G
AGCACCCATAGC-GGCCCCTAGTTGACGTG--GCAT--G--GGTCAACACATCACGCAAGCAGGTCAGCGAAAGATCGTG
C-AAAAAAGGACCTCGACGGAACCACTTACCATAGAATTAGGATCTAAACGTGCATTTTGAAAGGAGTAGGACTAAAGTG
ACACT-CCTAGAAACTTTTAGGGCCTCCAGTGTAT-----------TTTTCTCTCCTAGCGGTTGGCCCCTCAGTTGACG
TGGCATGGGTCAACGCGCCACGCGGGCAGGTCAGCGAGCGCTCGTGAAAAAAGGACCTCGG-ATGAACCACTTAGTGAAG
AATTAGGACCTAAATGTGCATTTTGAAAGAATTAGGACTAAAATGACACCCTGATGAAACTTTTAGGACCTCCAGTGCAT
TAAACTCT------------------------------------------------------------------------
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----------------------------------------------------
>chr5B_254
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------CAATCACTAGCTGTAGGCATTGAT
TTAGTTCGATTT--GCATTGTTTC-ATTAAGTTTTTCGAACCGCTTGCTCTGATTTGAGGTTGGGTGATACGAGATTGTG
GAGGAGGCAGCGCCGACGAT-ATGCTGCAATGCTCCCCTT-CGTCACCCAC--TTCCCTGTCGAGGAGCTTGTTGTCCTA
GCCATGGCGATGGTGTTGGCATGA-------GAGAGAG---------A-------GAGAGAGAGAGAGAAGATTTCAGT-
-------------AGGGGCCAGGAAATGTCAAGA-GGGGGG---TTTACAAGGGGCTTTCTATAAAAAAAGAGCAACCAC
AGCAGCC---------TCTAAGTTGACATG--GTGT--G--GCTCAACACGTCACGCGAGCAGGTCAGCAACCGCTCGAG
C-AAAAAAGGACCT-GGGTGAACCACTTACTATAGAATTAGGACCTAAACGTGCATTTTGAAAGAAGTAGGACTAAAGTG
ACACTGACCAGAAACTTTCAGG-----------AT-----------GTTTCTTGCCTGGCGGATGGGCCCTGTGTTGATG
TGGCGTGGGTCAACGTGCCACGCAGGCAGGTCAGTGCTCGTG-----AAAAAGGACCTCGG-GTGAACCACTTCCAAAAG
AATTAAGACCTAAAGGTGCATTTTGGAAGAATTAGGACTAAAGTGACACCCCAACAAAACTTTTAGAACCTCTAGTGCAT
TTAACTC-------------------------------------------------------------------------
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----------------------------------------------------
>chr1B_412
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------CCGAGCAGCTTGTTGTCCTA
GCCATGGCGATGGTGTGGGCACGA-------GAGAGAGGGGGGG-------------GAGAGAG------GATTTCGGC-
-------------AGAGGCTAGGAAATGTCAAGA-GGGGGG---TTTACAAGGGGCTTTCTGTAAAAAAAGAGCAACCAC
GGCAGCC---------GCTAAGTTGGCATG--GGGT--G--GCTCAACGCATCACGCGAGCAGGTCAGCAATTGCCCTTG
--AAAAAAGGACCTCGGATGAACCACTTACTATAGAATTAGGACCTAAACGTACATTTTGAAAGAAGTAGGACTAAAATG
ACATTGACCAAAAACTTTTAGG-----------AC-----------GTTTCTCGCCTAGCGGATGGGCCATGTGTTGATG
TGGTGTGGGTCAACACGCCACGTAGGCAGGTCAATGAGCGCTCATGAAAAAAGGACCTCGG-ATGAACCACTTACTAAAG
AATTAGGACTTAAATGTGCATTTTGGAAGAATTGGGACTAAAGTGACACCCCGACAAAACTTTTAGGACCTCTAGTGCAT
TTAACTCTTCTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------T-ATATGT--------------------------------------------------------------
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----------------------------------------------------
>chr4B_412
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CCGAGCAGCTTGTTGTCCTA
GCCATGGCGGTGGTGTGGGCACGA-------GAGAGAGGGGGGGGGGA-------GAGGAT------------TTCGGC-
-------------AGAGGCTAGGAAATGTCAAGA-GGGGGG---TTTACAAGGGGCTTTCTGTAAAAAAAA--------G
AGCAACCACGGCAGCCGCTAAGTTGGCATG--GGGT--G--TCTCAACGCATCACGCGAGCAGGTCAGCAATTGCTCGTG
C-AAAAAAGGACCTCGGATAAACTACTTACTATAGAATTAGGACCTAAACGTACATTTTGAAAGAAGTAGGACTAAAATG
ACACTGTCCAAAAACTTTTAGG-----------AC-----------GTTTCTCGCCTGGCGGATGGGCCATGTGTTGATG
TGGTGTGGGTCAACACGCCACGTAGGCAGGTCAATGAGCGCTCATGAAAAAAGGACCTCGG-ATGAACCACTTACTAAAG
AATTAGGACCTAAAGGTGTATTTTGGAAGAATTGGGACTAAAGTGACACCCCGAAAAAACTTTTAGGACCTCTAGTGCAT
TTAACTCTC-----------------------------------------------------------------------
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----------------------------------------------------
>chr6A_941
ATCCTCTGCTGCTCCTCCCCCGCAAACGATC-------------------------------------------------
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---------------------------------------------------------------------GACGGGCCTGG
CCGGCGCAGCCTGCGACGTCCGAGCTCCCGCCGCGC----------CGTCTCCGGCCATGGGGTTCCCCCTGGTGTGCTA
CTGCGTCGCCATCCCCAAGCCGATCATCGCCTTCTGCAAGCTCGTCGCCGCCGTCCGGGACGCCCTCCTCCTGCTGCTCT
CCCTCGTCGGCCTCTGCCGCTCCCCGCGCCGCTCCGTCCACGACGCCCCGCTGCCCGAGGAGGTCAAGGAGCGCCTCCCG
GCCGTCGAGTTCTCCTTGCTGGCGCGTCCGGCGCAGCAGCAGCAGGGGTGCCACGACGGGGACG---------CCGCGGC
GGCGGCGACGTGCATCGTGTGCCTGGAGCGGCTGCGGGCGGCGGACGAGGTGCGGCGGCTGGGCAACTGCGCGCACGCCT
TCCACCGCGGCTGCATCGACGGGTGGATCGACCTCGGCCGGACCACCTGCCCGCTGTGCCGCTCCCACCTACTGCCCCGC
CCGCGGAGGGACGGCCCGCTCGCCAGCCTCCTCACGCGCGTTTGGTGACGACCAACCGCGCCACTCGTTCGTTAGCTCCA
AGGCCACGTCTTTCCTTGTCCCAGCGCGGTGGCGGCCGACACAGAGATTCGCGATCTCGACCGGCTGCACGTATATTT--
--ATTGTGGGTTTACATCGTCTCAAAATCGGGATTTTATTTAGTAATTTAGTTTAGGGCGCCACTTTGTA---TAGCCAT
CCAATCACGAGGTCACCAATAGGTGCACAAGCATAGTTTTTTTTTTCCGTAGAGAAGGATTAGTCGGTCAAATATATGCG
TGGTCGTGTTTGGCTAGTGGATCT-GAAATGTCAACAGCTCGAGAACGCATGTCGCTGTTCGACTTGTCCAATCCCACTC
GTGGGACTACGACGTACAGTTGTAGTATAACTCATACT----TGATTCTT--CATATCAAATTGATGATTGTTTGCTGCC
TGAGTTTTGTTTTTTTGGTTCCGTGTCGTACTTCAATTTGCAGAGGCCAATAATGCGCGCGGGAGATTCTGGACACGAAC
ATGTGCACATTCCGCACCTTAGTTAAGACTACACAGTTCGGAAAAGACAGAAGTCACCTTGATTGATTGTTTTTTAGCCC
TGTAAACCCCAAG--ACAGTCACGTATGGCTCCACGGTATTAAGACCGAACATA-------GAACTATGAACGGGTTGTC
CATTTCATCTGTTTCTCTGCTCCAGTATCCAATAATGGCCACCACACAACAGGAACAGGACCCTATATATAGCGCGTAAC
CTCCAAATAATTCAATCCCATGGACTGCTGGTTTACATGGGAAGACCAACGGATGAAGATCACTTCCTTTAGTATAATCT
CACCAAACTTTGTTTAGGAGT---TACTAGCACATATGCCCGTGCGTTGCAACGGAACAAAAAATAGCATGCATTTAAGT
TGAGTGAGAAT-ACACGTGCAAGTAAAACCTTGTGACGCG----GGAAGGAACCTTTAGATTCTGGGTTTCGCCGTGTGT
GAAGTAATGAATCCGCTAACTTTTCATTCATTGATCGAGGGGATTTAAGGGGTTTGATA---------------------
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----------------------------------------------------
>chr6D_950
TCCT----CTGTTCCTCCCCCGCAAACGATA-------------------------------------------------
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---------------------------------------------------------------------GACAGGCCTGG
CCGGCGCAGCCTGCGACGTTCGAGCTCCCGCCGCGCGTCCACGCGTCGTCTCCGGCCATGGGGTTCCCCCTGGTGTGCTA
CTGCGTTGCCATCCCCAAGCCGGTCATCGCCTTCTGCAAGCTCGTCGCCGCCGTCAGGGACGCCTTCCTCCTGCTGCTCT
CCCTCGTCGGCCTCTGCCGCTCCCCGCGCCGCTCCGTGGACGACGCCCCGCTGCCCGAGGAGGTCAAGGAGCGCCTCCCG
GCCGTCGAGTTCTCCTTGCTGGCGCGTCCGGCAA------AGCAGGGGTGCCACGACGGGGACGACGACGTCGCCGCCGC
GGCGGCCACGTGCATCGTGTGCCTGGAGAGGCTGCGGGCGGCGGACGAGGTGCGGCGGCTGGGCAACTGCGCGCACGCCT
TCCACCGCGGCTGCATCGACGGGTGGATCGACCTCGGCCGGACCACCTGCCCGCTGTGCCGCTCCCACCTGCTGCCCCGC
GCGCGGAGGGACGGCCCGCTCGCCAGCCTCCTCACGCGCGTTTGGTGACGACCAACCGCGCCACTCGTT----AGCTCGG
AGGCCACGTCTTTCGTTGTCCCAGCGCGGTGGCGGCCGACACAGAGATTCGCGATCTCGACCGGCTGCATGTATATTTAA
AGATTGTGGGTTTACATCGTCTCAAAATCGGGATTTTATTTA--------GTTTAGGGCGCCACTTTGTA---TAGCCAT
CCAATCAAGAGGTCACCAATAGGTGCACAAGCATAGTTTTTTTTT--CGTAGAGAAGGATTAGTTGGTCCAATATATGCC
TGGTCGTGTTTGGCTAGTGGATCTCGAAATGTCAACAGCTCCAAAACGCATGTCGCTGTTCGACTTGTACAATCCCAGTC
GTGGGACTACGACGTACAGTTGTA---TAACTCATACACTTATGCTTCATTAAAAAAAAACTTGATGATTGTTTGCTGAC
CGAGTTTTAATTTTTTGGTTCCGTCTAGTACCTCAATTTGCAGTGGCCAATAGTGCGTGGGGAAGATTCTGGACACGAAC
ATGTGCACATTC----------------------AGTTCGGAAAAGACAGAAGTCACCTTAATTGATTGATTTTTAGCCC
TATTAACGAGTTA---------------------------------------------------------------TATC
CATTTCCCCTGTTTCTCTGC-------TCCAATAATAGTCACCACACAACAGGAACAGGACCCTATATATAGCGCGTAAC
CTCCAAATAATTCAATCTCATGGACTGCTGGTTTACATGGGAAGACCAACGGACGAA-ATCACTTCCTTTAGTGTAATAT
CACCAAACTTTGTTTAGTAGTTACTACTAGCACATATGCCAGTGCGTTATAACGGGACAAAAAATAACGTGCATTAAAAT
TTAGTGAGAAT-ATATGTGCAAACAAAACCTTGTGTGCACG-CAGGAAGGAACATTTAGATTCTGGGTTTCGCCGCGTGT
GAAGTAATCAATCCGCTAACTTTCCATTCATTGATCGAGGGAATTTAAG-------------------------------
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----------------------------------------------------
>SNPs
--------S-----------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S----------------------------------S----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
---------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
--------------S--------SS-----------------------S-------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
------------SS--SS----------------------------------------------------SS-S------
S---------------------------------S-----S---------------------------------------
-------S--------------------------------------------------S-----------------S---
---------------------------------------------------------------S----------------
-----------------S------------------------------------------------------S-------
------------------S---------S--------------SSSS-----------------------SSS-------
---------------------------S-S------------SSSS---------------SS------S--S-----S-
-SS-S-S------S---------------------------------------S-------------------------S
-----------------------------------------------------------S--------------------
-----------------------------------------------------------S--------------------
---------------------------S----------S----------------------S------------------
----S-SS--SS-SS---------------------------------------SSSSSSS-------------------
--------------------------------------------------------SSSSSSSS-S--------------
---S-----------------------------------------S-------------------S----S--------S
---------------------------------------------------S-S---S---------S------------
-----------S-----------------S-----------S--S--------------S--------------S-S---
-------------------------S-----------------------SSS-------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1095
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-----------------------------------ACATCCTCTCCTCCTCGTCC-------------------------
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----------------------------------------------------
>reverse_2879
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------CG
AGTGGTGCAACTCAATGC--------------------------------------------------------------
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----------------------------------------------------
