>input_sequence_65792
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-----------------------------------------------CAGACACCAACACAGCTAGCATTAGCACCACCA
ACA-----------------CCAC-------------------TGCCAGTAC---------------CAGCTAGCTAGCT
TGCAGCTGCTGCTTGC-------------GC---TTAGACCT-CAAGCTTGTGATTCGGCTGCATAC----TCAAACTAG
CTA---G-CTTCTCATGGCGCCAGCGTCCAAGGTCATGAGCCA---CGTCATCAAAGACGGCGGCATTGCCGACTATGCC
GTTTACGCGGCCGCGCTGTGTGACGCCGGGTGCGGCGGGTGGCACAGGAAGGCCGAGTCGGACGGCGACGACGATGATGA
CGACTATGACTGCGCGCCTGCCGCCTGAAGTGCACGTTCGGTCGA-----------CGGCGAAACGAATCTGGAACCTGA
CCGCCAAGAGCTAGTATGAATG----------------------------------------------------------
--------------TATCCCCCCTAATATATGAGG------CAGTGAGTC------GTGTGCTTTTTGTAACCGGGAAGT
A--------G----TTTGTGCCGCTTAATTAACCCACTGTGTGCTG-----CTGGCT-AAATATGCTCAATTTAGGTATG
C----CTAGTTGCCTACTCGTA---TAGATATTGAAA-GTAGGCTTGCGCTT----TTCA--------TCGA----CTAG
CTTGT--TACTGCAATAAAACTACAGTTTGACTAATTCACATCTAGATGTTTTTTAAGAATGTCACATTTAAGCTCCCAC
AAATACATAATGCAACAGAAAAACAAGAAAAAACAAAGACAAAAAGAAGAGCATAAAACAGAGTGAACATCAGCTTAGAG
ATATGTCCTAGACGGACCCATAAAACTGATATCTTGATCAGTACA--TCACTACCTTACTGTCTGAGACCGGCCTTCAAT
AAAACTGATATCTTGATCAGTAGTACTCCGTACATCACAAATTTTCGTTACTGTTTATGTACGTATCTGTTGTTGCT---
--------CTGCCGAATCATTGCATGCTCTTG------TATATGTTGGCA-----------------------------T
AAACTTTTGGTGC-TCGCT-------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G067200
TCAGTGTAAACATCATGGCAATTCATGTGCAATAGACATGGCAACTTTTAACGCAAAAAAATTCGTCGAAATATATTGAT
ATGAGATCTAGTTTCGAAGATCTCATCGTGAGGGATTTAATGGTGAAAACGGATCTTCAATCGGATTTTTCATTCAAAAG
ATAAAACATTTTAAAAACAGAAAATCCAAAAAAAAAATCATATGCATGCATGCGGTAACATGACGTAGTATGTGTGCTAT
AAGGCGTGTGGGCGGGTTTGACTCGCACCACACGTGTGGGCAAAATAGCATTCACCTCCTAATTAACCGCCCCTGATTTT
AACTGGTGGGGTGAGCGCCCAGGCCCGTAAAGCCCCGTAATTGTCTGTTGATGTA-------------------GCAAAG
CTCATACAACATTGCCGATTCCAGCATTAATAATCAGCACTACGTGCGGCACTGCCGTATTCGGCAACGACGGATCAACC
ATGATC----ATCATCAGTCTAGCTAGTCGTCTTTGTTCATAGTA-----------------------------------
TTGATCACCGGCCG-------GAAGAAGCAGACGCAA--------CGAAAGCATGCAGGCGACAAA----ATATATATCC
GCACCGAATTGCAGTAAAGTGCGAGATCTCTCATC-----ACC----CGAGATGCCGTTGATAAA-GGCTCCCTGGACCT
CGAGTCTACTGATCTGTGTCGACAGTTC-------------AGCCTTTTCCACCTCCCG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTAGCTCGCTGCCGGCGTGGCCCCC------------CACCGTCCTCGCGATTCCTTC
CTCCACGTCGGGCGGTCCGGGCCACCCGGTACCTCAGCCG-CCGCAGCCACTGGCATGTAGACCGCGCGGGTCCCGGGCG
CTCACCTGTCAGCGGCATGGCGGTGCCGACGAGGCTCCCCGGCTGCTGAGTCTGCAGCGCCGCGCCCC-GTGCCGCGCCA
TGGCCATGCACGCAGCGGCATGTCCGACGCACGCTCCCAGCGCTCCCGGCCGCGTGCCG----------CCACACATTCT
GTCGTCCTATAAAACCCACACCGCACGCGGCTATACTCTGCAAGTATCAGACACCAACACAGCTAGCATTAGCACCACCA
ACA-----------------CCAC-------------------TGCCAGTAC---------------CAGCTAGCTAGCT
TGCAGCTGCTGCTTGC-------------GC---TTAGACCT-CAAGCTTGTGATTCGGCTGCATAC----TCAAACTAG
CTA---G-CTTCTCATGGCGCCAGCGTCCAAGGTCATGAGCCA---CGTCATCAAAGACGGCGGCATTGCCGACTATGCC
GTTTACGCGGCCGCGCTGTGTGACGCCGGGTGCGGCGGGTGGCACAGGAAGGCCGAGTCGGACGGCGACGACGATGATGA
CGACTATGACTGCGCGCCTGCCGCCTGAAGTGCACGTTCGGTCGA-----------CGGCGAAACGAATCTGGAACCTGA
CCGCCAAGAGCTAGTATGAATG----------------------------------------------------------
--------------TATCCCCCCTAATATATGAGG------CAGTGAGTC------GTGTGCTTTTTGTAACCGGGAAGT
A--------G----TTTGTGCCGCTTAATTAACCCACTGTGTGCTG-----CTGGCT-AAATATGCTCAATTTAGGTATG
C----CTAGTTGCCTACTCGTA---TAGATATTGAAA-GTAGGCTTGCGCTT----TTCA--------TCGA----CTAG
CTTGT--TACTGCAATAAAACTACAGTTTGACTAATTCACATCTAGATGTTTTTTAAGAATGTCACATTTAAGCTCCCAC
AAATACATAATGCAACAGAAAAACAAGAAAAAACAAAGACAAAAAGAAGAGCATAAAACAGAGTGAACATCAGCTTAGAG
ATATGTCCTAGACGGACCCATAAAACTGATATCTTGATCAGTACA--TCACTACCTTACTGTCTGAGACCGGCCTTCAAT
AAAACTGATATCTTGATCAGTAGTACTCCGTACATCACAAATTTTCGTTACTGTTTATGTACGTATCTGTTGTTGCT---
--------CTGCCGAATCATTGCATGCTCTTG------TATATGTTGGCA-----------------------------T
AAACTTTTGGTGC-TCGCTTCACTTGTTTAGTTTGCATCT-GGTAAGAGTCAACAACAGGCCGGCTATCCAATTTC----
-----------------------------------------------------------TTTTTTCCTTCCACAAATCTT
CTCTCC--TATATATCTAATCAC---TATTTTTTCCCTTTCTTTCTTTCTGAAAGATACGACCACAC-TTTGCTAAATTT
CAATGTTTTATTATTCAACTTGCTAGCTCTGTGTCAAAAAAAAAACATCTTACATTTTGGGAGGGAGGGAGTAGCTAGTA
GC------CTAGTACAGTATGCTCCACTCCATCATATATATACATCTGCCCACATTCATATTTATTATGCATTCAACTAT
ATGGTGTTCATGCTACAATTGCATATAGGCATATGCTCCACTCCATC--ATATATATACATCTGCCCACATTCATATTTC
TGCATGCCGAACACTTCAATATGTAGCTCCTAAGGAAAACAA-GAGGG-AAGAAATTGAGCACCACAGGAAACTCATATA
CATATTATTGTTTTAGTTAT----TATAGCTATGTCGATCATTGGATATGTTCATGGCTATTATACACAGGCCCGGTCCT
GAGATTTTCGGGGCCCGGGGCACAATTAAAATGTAGGCCCCTTAAATTTTTAATTATTTATTTGT--AAAGGTTAAAGAT
AATTATGTCGAAAGAAAGATGAACATGGTTATACCATCTTCGAAATCGCTTCCTCGAGGTGGCCGCTGGGCAC-----GG
TGCGGTCTCCTATCGGTTACTCGCCTCTCATTATGGTCGCGTGAGGGAGTGATCGAGAATATTCGGCTAGGGAGCATAGG
AGATCAAACGTTGGCCGATAAGCAGCTGGACAAGGGGTAATCACATATGACGTCAAGACAAGTTGCCTTTACCATG---A
AGGACGAACTATTTTCTTCTTCTTCTTTTTTGTATGGTGAAACCAATGGCACGAGGAGAATGTTTTGTGACATAAAATGT
ATAATCAGCTACAGAGCAACTACA--ATCAGCATATGCGAATATATTAGGACCATTGAGATTATCAATGTACATC
>chr3A_277
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------------------------------------TGGGCAAAATAGCATTCTCCTCCTAATTAACCGCCCCTGA-TTT
AACTGGTGGGGTGAGCGCCCAGGCCCGTAAAGCCCCGTAATTGTCTGTTGATGTACTACGTGCCATGATGAGTAGCAAAG
CTCATACAACATTGCCGATTCCAGCATTAAAAATCAGCACTACGTGCGGCACTGCCGTATTCGGCAACGACGGATCAACC
ATGATC----ATCATCAATCTAGCTAGTCGTCTTTGTTCATACTAGTATGTACCGCTGGTGTGGC-AACTGGGATTAACA
TTGATC----ACCGGCCGGAAGA------------------------AACGCATGCAGGCGACAGAAT--ATATATATCC
GCACTGAATTGCAGTAAAGTGCGAGAT-----ATCTCATCACC----CGAGATGCCGTTGATAAAAGGCTCCCTGGACCT
CGGGTCTACTGATCTGCGTCGACGGT--------TCTAGCTAGCCTTTTCCGCCTCCCG---------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------TTAGCTCGCTGCCCGGTTGGCCCGC------------CATCGTCCTCGCGATTCCTTC
CTCCACGTCGAGCGGTCCAGGCCACCCGGCACCGGAGCCA-CCGCAGCCACTGGCATGTAGACCACGCTGGTCCAGG-AG
CTCACCTGTCAGCGGCATGGCGGTGTCTGCGAGGCTCCCCGGCTGCTGAGTGTGCGGCGCCGTGCC-C-GTGCCACGCCA
TGGCCATGCACGC-GCGGCATGTCCGACGCACGCTCCCGGCGCTCGCGGCCGCGTGCCGCCACATTTCCC-ACACATCCT
GTCGTCCTATAAAACCCACACCACACGCGGCTATACTCTGCAGACATCAGACACCAACACAGCTAGCATTAGCTCCACCA
ACA-----------------CCAC-------------------TACCAGTA-------GCT-------------------
--A-------GCTTGCAGCTGCTGCTCGCTCTTATTAGACCT-CAAGCTTGTGATTCGGCAGCATAC----TCAAGCTAG
CTCCTCA-----TCATGGCGCCTGCGTCGAAGGTCATGAGCCA---TGTCGTCCAAGACGGCGGCATTGCCGACTATGCC
GTTTACGCCGCCGCGCCGTGTGACGCCTGGTGCGGCGGGCGGCACAGGAAGGCCGAGTCGGACGGCGACGACGATGATGA
CGACTATGACTGCGCGCCTGCCGCCTGAAGTGCACGTTCGCGCC----TGGTCGCCCGGCGAAACGAACCTGGAACCTGC
CGGCCAAGAGCTAGTATGAATG----------------------------------------------------------
--------------TGTCCCACTCCCACCTAGTAT-------------------AGGTGTGCTTTTTGTAACCAGGAAGT
A--------G----TTCCTGCCGCTTAATTAACCCACCG-----TG-----CTCGCT-AAATATGCTCAATTTAGCTATG
C----CTAGTTGCCTACTCGTA---TAGATATTGAAA-GTAGGCCTGTGCTT----TTCA--------TCGA----CT--
--TAT--TACTGCA------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ATAAAACTGATATCTTGATC-----------------------------------------
-----------------------------------------------------------TACGTATGTGTTGTTGCT---
--------CTGCTG-ATCATCGCATGCTCCTATTATCCTATATGTTGGCA-----------------------------T
AAACTTTTGGTGC-TCGCTTGACTTGTTTAATTTTCATCTAGGGAAGAGT---CAACAGGCCGGTTATCCGATTTCATTT
TGCGTTTTTTTTTGCAGGTGCGACTTCATTTTGCGTTGATTTTTCTTGAAGCAGAATTCTTTTTTCTTTC-ACAAATCTT
CTCTCAGAGAGAGCAGGCTACGATATA-----------TTCTTTCTTTTTGGAAGATACGG-----C-TTTGCCGAATTT
CAATGTTTTATTATCCAACTTGCTAGC--------------------------------------------TAGCTAGTA
GC------CAGTAAGATTCTACATATGATCAATGACATTCTTTTGAACTTATTTATG------------CATTCAGCTAT
ATGCTGTTCATGCTACAATTGCATATAGGCATATGCTCCACTCGATC--ATATATATACATCTGCACACATTCATATTTC
TGCATGCCGGACACTTCGATATGTAGCTCCTGGGGAAAACAA-GA-GG-AAAAAATTGAGCACCACAGGCAACTCATAGA
CATATTATTGTTTTAGTTAT----TATAGCTGGGTCCATCGTTGGATATGTTCATGGCTATTATACA-------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3D_387
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----ACAACATTGCCGATTCCAGCATGAATAATCAGCACTACGTGCGGCACTGCCGTATTTGGCAACGACGGATCGACC
ATGATC----A---TCAATCTACCTAATCGCCTTTGTTCATAGTAC-------CGCTGGTGTGGCAGACTGGGATTAACA
TTGATCGCCGGAGG-------GAAGAAGCAGACGCAA--------CGAACGCATGCAGGCGACAGAAT--ATAT--GTCC
GCGCCGATTTGCAATAAAGCGCGAAAT-----ATC-----ACC----CGAGATGCCGTTGATAAA-GACTCCCTGGACCA
GTC-TACACAGATCTGCGTCGACGGTTCTAGCAATCTAGCTAGCCCTTTCCACCTCCCG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTAGCTCGCTGCCGGCGTGGCCCGC------------CATCGTCCTCGCGATTCCTTC
CTCCACGTCGGGCGGTCCGGGCCACCCGGCACCAGAGCCG-CCGCAGCCACTGGCATGTAGACCGCGCTGGTCCCGGGCG
CTCACCTGTCAGCGGCATGGCGGTGTCGACGAGGCTCCCCGGCTGCTGAGTCTGCGGCGCCGCGCCTT--------GCCA
TGGCCATGCACGCAGCGGCATGTCCGACGCACGCTCCCAGCGCTCCCGGCCGCGTGCCGGCACATTTCCCCACACATCTT
GTCGTCCTATAAAACCCACACCACACGCGGCTATACTCTGCAGATATCAGACACCAACACAGCTAGCATTAGCATCACCA
CCA-----------------ACACCACCCCCTTA-------ACTGCCAGTGC---------------CAGCTAGCTAGCT
TGCAGTTGCTGCCTGC-------------GC---TTAGACTTCCAAGCTTGCGATTTGCCTGCATAC----TCACGCTAG
CTT---G-----TCATGGCGCCCGCGTCGAAGGTCATAGGCCA---CGTCATCAAAGACGGCGGCATTGCCGACTATGCC
GTTTACGCGGCCGCGCCGTGTGACGCCTGGTGCGGCGGGCGGCACAGGAAGGCCGAGTCGGACGGCGACGATGATGATGA
CGACTATGACTGCGCGCCTGCCCCCTGAAGTGCACGTTCGTGCC----TGGTCGCCCGGCGAAACGAACCTGGAACCTGC
CGGCCAAGAGCTAGTATGAATG----------------------------------------------------------
--------------TGTCCCACCTAATATATGAGG------CAGT--------GAGGTGTGTTTTTTGTAACCGGGAAGT
A--------G----TTCGCGCCGCTTAATTAACCCACCG-----TG-----CTCGCT-AAATATGCTCAGTTTAGCTATG
CCTAGCTAGTTGCCTACTCGTC---TAGATATTGAAA-GTAGGCTTGTGCTT----TTCA--------TCGACTAGCT--
--TGTTATACTGCA------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ATAAAACT-----------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3D_387
--------------------------------------------------------------------------------
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-----ACAACATTTCCGATTCCAGCATTAATAATCAGCACTACGTGTGGCACTGCCGTATTTGGCAACGACGGATCAACC
ATGATC----A---TCAATCTACCTAATCGTCTTTGTTCATAGTAC-------CGCTGGTGTGGC-GACTCGGATTAACA
TGATC-----GCTG-------GATGAAGCAGACGCAAACGTACG-----CGCATGCACGCGACAGA----ATATATATCG
GCACCGAATTGCAATAAAGTGCGAAAT-----ATA---------------------------------------------
------TACTGATCTGCGTCGACGGTTCTAG----CTAGCTAGCCTTTTCCATCTCCCG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTAGCTCGCTGCCGGCGTGGCCCGC------------CATCGTCCTCGCGATTCCTTC
CTCCACGTCGAGCGGTCCGGGCCACCCGGCACTGGAGCCA-CCGCAGCCACTGGCATGTAGACCACGCTGGTCCCGGGAG
CTCACCTGTCAGCGGCATGGCGGTGTCGGCGAGGCTCCCTGGCTGCTGAGTGTGCGGCGCCGCG-CCC-GTGCCACGCCA
TGGCCATGCACGCAGCGGCATGTCCGACGCACGCTCCTGGCGCTCCCGGCCGCGTGCGGCCACATTTCCCCACACATCCT
ATCGTCCTATAAAACCCACACCGCACGCGGCAATACTCTGCAAGTATCAGACACCAACACAACTAGCATTAGCACCACCA
ACA-----------------CCAC-------------------TTCCAGTACCAGCTAGCTACCTTGCAGCT--------
-------GCTGCTTGC-------------GC---TTAGACCT-CAAGCTTGTGATTCGCCTGCACAC----TCAAGCTAG
CTCCT---------ATGGCGTCGGTGTCGAAGGTCATGAGCCACATCGTCGTCCAAGACAGCGGCATTGCCGACTATGCC
GTTTATGCGGCCGCGCCGTGTGACGCCTGGTGCGGCGGGCGGCATAGGAAGGCCGAGTCGGACGGCGACGACGATGATGA
CGACTATGACTGCGCGCCCGCCGCCTGAAGTGCACGTTCGTACC----TTATCGCC-GG-CAAACGAATCTGGAACCTGC
CCGCCAATAGCTACTCCTAGTATATTTATTTTGCGAACTGATCGCTGCTGCCGTGTATGCGAATTCGATCTCAAGTACGT
AGGTACGTTACGTATATCCCCACTAGCTAGTATATGAAGCACAGT--------GAGGTGTGCTTTTTGTAACCGCGAAGT
A--------GCTAGTTCGTGCCGCTTAATTAGCCCACCG-----TGTGCTGCTGGCT-AAATATGCTAAATATAGTTATG
C----CTAGTTGCCTACTCGTGTAGTAGATACTGAAA-GTAGGCTTGTGCTT----TTTA--------TCGACTAGCT--
--TAT--TACTGCA------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ATAAAACTGATATCTTGATCAGTATA--TCACTACCTTAT---------------------
---------------------------------------------------TGTTTGTGTACGCATGTGTTGTTGCAGCT
GTGCCAAACTGCTG-ATCCAGATACATTTGTATCTGACAAATCTAAAACAAGCTTTGGGACGGAGGGGGTACACAATTCT
AAACTTCTAGTGCTTCGCTTCACTATTTTAATTTTCATCT-GGGAAGAGT---CAACAGGCCGGCTATCCAATTTT----
---------------------------ATTTTGCGTTGATTTTTCTTGAAGCAGAACTCTTTTATGTTTC-ACAAATCTT
ATCTCAGAGAGAGCAGGTTACG--ATA-----------TTCTTTCTTTCTGGAAGATACGG-----CTTTTGCCAAATTT
CAATGTTCTATTATTCAACTTGCTAGCTTTTTTTTTTGCGGAATAACTTGCTAGC----------------TAGCTAGTA
GC------CAGTAAGATTCTAGATATGATCAATGCCATTCTTTTGAACTTATTTATG------------CATTCAGTTAT
ATGGTGTTCATGCTACGATTGCATATAGGCATATGCTCCACTCCATCGTATATATCTACATCTGCCCACGTTCATACTTC
TGCATGCCCAACACTTCGATACGTAGCTCCTAGGTACAAAAACGA-GG-AAAAAATTGAGCACCACAGGCAACTCAGAGA
CATATTCTTGTTTCAATTAT----TA------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3B_387
--------------------------------------------------------------------------------
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-----ACAACATTGCCGATTCCAGCATTAATAATCAGCACTACGTGCGGCACTGTCGTATTGGGCAACGACGGATCAACC
ATGGTCATCAA---TCAATCTACCTAATCGTCTTTGTTCATAGTAC---GTACCGCTGGTGTGGC-GACTGGGATTAACA
TTGATC----GCCG-------GATGAAGCAGACGCAAACTTACG-----GGCATGCAGGCGACAGAATATATGTATATCC
GCACCGAATTGCAATAAAGTGGGAAAT-----ATC-----ACCCGATCGAGATGCCGTTGCCAAA-GGCTCCCTGGACTA
GTC-TACACAGATCTGCGTCGACGGTGCTAGCAATCTAGCTAGCCCTTTCCACCTCCTG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTAGCTCGCTGCCGGCGTGGCCCGC------------CATCGTCCTCGCGATTCCTTC
CTCCACGTCGG-CGGTCAGGGCCACCCGGCACCGGGGCCG-CCGCAGCCACTGGCATGTAGACCGCGCTGGTCCCGGGCG
CTCACCTGTCAGTGGCATGGTAGTGCCGGCGAGGCTCCCCGGCTGCTGAGTGTGCGGCGACGTG-CCC-GTGCCGCGCCA
TGGCCTTGCACGCAGCGGCATGTCCGACGCACGCTCCCAGCGCTCCCGGCCTCGTGCGGCCACATTTCCCCACACATCCT
GTCGTCCTATAAAACCCACGCCACACGCGGCTATACTCTGCAGATATCAGACACCAACACAACTAGCATTAGCCCCGCCA
ACA-----------------CCAC-------------------TGCCGGTAC---------------CAGCT--------
-------GCTGCTTGC-------------GC---TTAGACTT-CAAGCTTGTGATTCGGCCGCATACGTACTCAAACTAG
CTA---G-TTTCTCATGGCGCCGGCGTCGAAGGTCATGAGCCA---CGTCGTCCAAGACGGCGGCATTGCCGCCTATGCC
GTTTACGCGGCCGCGCCGTGTGACGCCTGGTGCGGCGGGCGACACAGGAAGGCCGAGTCGGACGGCGACGACGATGATGA
CGACTATGACTGCGCGCCTGCCGCCTGAAGTGCACGTTCGTGCC----TGGTCGCCCGGCGAAACGAACCTGGAACCTGC
CGGCCAAGAGCTAGTATGAATG----------------------------------------------------------
--------------TGT-------------AGTAT-------------------AGGTGTGCTTTTTGCAACCGGGAAGT
A--------G----TTCCTGCCGCTTAATTAACCCACCA-----TG-----CTCGCT-AAATATGCTCAATTTAGCTATG
C----TTAGTTGCCTACTCGTA---TAGATATTGAAA-GTAGGCCTGTGCTT----TTCA--------TCGACT------
--TAT--TACTGCA------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ATAAAACTGATATCTTGATC-----------------------------------------
-----------------------------------------------------------TACGTATGTGTTGTTGCT---
--------CTGCTG-ATCATTGCATGCTTCTATTATCCTATATGTTGGCA-----------------------------T
AAACTTTTGGTGC-TCGCTTGACTTGTTTAATTTGCATCTGGGGAAGAGT---CAACACGCCGGCTATCCGATTTT----
-----------------------------------------------------------CATTTTT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3A_390
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ACATTGCCGATTCTC-CATTAATAATCAGCACTACGTGCGGCACTGCCGTATTCAGCAACGACGGATAGACC
ATGATCATCAA---TCAATCTACCTAATCGTCTTTGTTCATAGTAC---GTACCGCTCGTGTGGC-GATTGGGATTAACA
TTGATCGCCGGAGG-------GAAGAAGCAGACGCAAACGTACG-----CGCATGCAGGCGACAGAATA----TATGTCC
GCACCGAGTTGCAATAAAGTGCGAAAT-----ACC-----ACCCGATCGAGATGCGGTTGCTAAA-GGCTCCAAG-----
---------TGATCTGCGTCGACGGTTCTAG----CTAGCTAGCCTTTTCCACCTCCCG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTAGCTCGCTGCCGGCGTGGCCCGC------------CATCGTCCTCGCGATTCCTTC
CTCCACGTCGC-CGGTCAGGGCCACCCGGCACCAGAGCTG-CCGCAGCCACTGGCATGTAGACCGCGCCGGTCCCGGGCA
CTCACCTGTCAGCGGCATGGCGGTGTCGGCGAGGCTCCCCGGCTGCTGAGTGTGCGGCGCCGTG-CCC-GTGCCACGCCA
TGGCCATGCACGC-GCGGCATGTCCCACGCACGCTCCCAGCGCTCGCGGCCGCGTGCCGGCACATTTCCCCACACATCCT
TTCGTCCTATAAAACCCACACCGCACGCGGCTATACTCTGCAGATATCAGACACCAACACAGCTAGCATTAGCATCACCA
ACA-----------------CCAC-------------------TGCCAGTACCAGCTAGTT-------------------
--A-------GCTTGC-------------GC---TTAGACCT-CAAGCTTGTGATTCGGCTGCATAA----TCAAGCTAG
CTA---G-CTCCTCATGGCGCCGGCGTCGAAGATCATGAGCCACATCGTCGTCCAAGACGGCGGCATTGTTGCCTATGCC
GTTTACGCCGCCGCGCCGTGTGACGCCTGGTGCGGCGGGCGGCACAGGAAGGTCGAGTCGGACGGCGATGACGACGATGA
CGACTATGACTGCGCGCCTGCCGCCTGAAGTGCACGTTCGTGCC----TGGTCGCC-GGCGGAACGAATCTGGAACCTGC
CCGACAAGAGCTAGTATGAATG----------------------------------------------------------
--------------TATCCACCCTAATATATGAGG------CAGTGATCGATCGAGGTGTGCTTTTTGCAACCGGGAGCT
AGTATGAACG----TTCGTGCCGCTTAATTAACCCACCG-----TG-----CTGGCTAAAATATGCTCAATTTAGCTATG
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3D_444
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GGCAACGACGGATCAACC
ATGATCATCAA---TCTG----CCTAATCGTCTTTGTTCATAGTAC---GTACCGCTGGTGTGGC-GGCTGGGATTAACA
TTGATCGCCGGAGG-------GAAGAAGCAGGCGCAACCGCGCAACGAACCCATGCAGGCGACAGAATA----TATGTCC
GCACCGAATTGCAATAAAGTGCGAAAT-----ATC-----ACCCGATCGAGATGCCGTTGCTAAA-GGCTCCTAG-----
---------TGATCTGCGTCGACGGTTCTAG----CTAGCTAGCTTTTTCCACCTCCCG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTAGCTCGCTGCCGGCGTGGCCCGC------------CATCGTCCTCGCGATTCCTTC
CTCCACGTCGG-CGGTCAGGGCCACCCGGCACCAGAGCCG-CCGCAGCCACTGGCATGTAGACCGCTCTGGTCCCGGGAG
CTCACCTGTCAGCGGCATGGCGGTGTCGACGAGGCTCCCCGGCTGCTGAGTCTGCCGCGCCGCG-CCC-GTGCCCCGCCA
TGGCCATGCACGCAGCGGCATGTCCGACGCACGCTCCTGGCGCTCTCGGCCGCGTGCCG----------CCACACATCCT
GTCGTCCTATAAAACCCACACCGCACGCGC----ACTCTGCAGATATCAGACACCAACACAGCTAGCATTAGCACCACCA
GCA-----------------CCAC-------------------TGCCAGTACCAGCTAGCT-------------------
--A-------GCTTGCAGCTGCTGCTCGCGCTTATTAGACTT-GAAGCTTGTGATTCGCCTGCATAT----TCAAGCTAG
CTCCTCG-----TCATGGCGCCGGCGTCCAAGGTCATGAGCCA---CATCGTCCAAGACGGCGGCATTGCCGACTATGCC
GTTTACGCCGCCGCGCTGTGTGACGCCTGGTGCGGCGGGCGGCACAGGAAGGCCGAGTCGGACGGCGACGATGATGATGA
CGACTATGACTGCGCGCCTGCTGCCTGAAGTGCACGTTCGT--------------------------ATCTGGAACCTGC
CCGCCAAGAGCTAGCATGAATG----------------------------------------------------------
--------------TATCCCCCCTAATATATGAGG------CAGT--------GAGGTGTGCTTTTTGTAACCGGGAAGT
A--------G----CTAG--------------------------TT-----CGCGCCGCTTAATTAA-------------
------------CCCACTTGTA---TAGATATTGAAA-GTAGGCTTGCGCTT----TTCA--------TCGACTAGCT--
--TGT--TACTGCA------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ATAAAACTGATATCTTGATCAGTACA--TCACTACCTTACTGTCTGAGACCGGCCTTCAAT
AAAACTGATATCTTGATTAGTAGTACTCCCTACATAACAAATTTTCGTTACTGTTTATGTACGTATCTGTTGTTGCT---
--------CTGCCGAATCATTGCATGCTCTTG------TATATGTTGGCA-----------------------------T
AAACTTTTGGTGC-TCGCTTCACTTGTTTAGTTTGCATCT-GGTAAGAGT---CAACAGGCCGGTTATCCAATTTCATTT
TGT-------------------------------GTTGATTTTTCTTACAGCAGAATTCTTTTTTCCTTCCACAAATCTT
CTCCTATATATCTAGCTAATCAC---TATTTTCTTTCTTTCTTTCTTTCTGAAAGATACGAC--CAC-TTTGCCGAATTT
CAATGTTTTATTATTCAACTTGCTAGCTTTGTGTCAAAAAA----CATCTTACA-TTTGGGAGGGAGGGAGTAGCTAGTA
GC------CTAGTACAGTATG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr3D_502
ATTGAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GGCCGGAGGAAGAAGCAGAC--------GC----AACGCATGCAGGCGACAGAATA----TATATCC
GCACCGAATTGTGATAAAGCGGGAAAT----------ATCACC----CGAGATGCCATTGATAAA-GACTCCCTGCACTA
GTC-TCTGCTGATCTGTGTCGACGATGCTAA----CTTTTTCGTCCTCT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CTGGCTGCCAGGTGGTCCTGGAGGCCTCTCCATCCTCCTCCTTGCGATTCCCAT
CTCCACGCTGGCCGGCCCGGGGCACCCGGTGCCGCAGCCG-CGGCACCCACTGGCATGTAGACCGCGCGGCCG-CGGGCG
CTCACCTGTCAGCGGCAAGGTGGTGTCGGCGGGACTCCCCGGCTGCCGAGTGTGCCGCGCTGCG-CCC-GTGCCGCGCCG
TAGCCATGCACGCAGCGGCATGACCGATGCACGCTCCCAGCGCTCCCCGCCGCGTGCCGCCACATTTCCC--CACCTCCC
GCCGTCCTATAAAACCCACACCACACGCGGCTATACTCTGCAGATATCAGACACCAACACAGCTAGCATTAGCGCCACCA
CCA-----------------CCACCCATCAGCCCCATCACCACTGCCAGTAC---------------CAGCTAGCTAGCT
TAA-------GCTTGCAGCAACTGCTTGCGC---CTAGACTT-CAAGCTTGTGATTTGCCTACATAC----TCAAGCTA-
--A---G-CTTCTCATGGCGCCGGCGTCCAAGGTCATGAGCCA---CATCGTCCAAGACGGCGGCATTGCCACCTACGCC
GTTTACGC---CGCGCCGTGTGACGCCTGGTGCGGCGGGCGGCATAGGAAGGCCGAGACGGACGGCGACGACGACGATGA
CGACTATGACTGTGCGCCTGCCGCCTGAAGTGCACGTACGTTCGTACATGGTCGT-CGGCCAAACGAATCTGGAACCTGC
CCGCCAAGAGCTAGTAT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr7B_513
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------GCCG-------GATGAAGCAGGCGCAAACGTACG-----CGCATGCAGGCGACAGAATA----TATATCC
GCACCGAAGTGCAATAAAGTGCGAGAT-----ATCTCATCACC----CGAGATGCCGTTGATAAA-GGCTCGCAGGACCT
CGAGTCTACTGATATGCGTCGACGGT--TAG----CTAGCTAGCTTTTTCCATCTCCCGTTAGGCTGGTCGTAATGGTAG
TATCATAGCTAATATCATGCATGCCAATTAGGCAATTTTGATGAGGTGGCATAGCATTAAATGAAGAAAGAGATGGTGTA
GTATCATATCATGATACCGTATTATATTAAATGCTATGCTACTTTGTGTCATGCATGACAATAAATAGAGTACAACATGA
TACTAATATATGATACTATGCATTAGGGAGGTAGTATCATACACTAGTATCATATGCATATGATACTAGTGTATGATACT
ACCTCCCCCATTACAACCAGCCTTAGCTCGCTGCCGGCGTGGCCCGC------------CATCGTCCTCGCGATTCCTTC
CTCCACGTCGA-CGGTCAGGGCCACCCGGCACCAGAGCCGCCCGCAGCCACTGGCATGTAGACCGCGCTGGTCCCGGGCG
CTCACCTGTCAGCGGCATGGTGGTGCCAGCGAGGCTCCCCGGCTGGTGACTATGCGGCGTCGCG-CCCCGTGCCGCGCCA
TCGCCAGGCACGCAGCGGCATGTCCGGCGCACGCTCCCGGCGCTCGCGGCCGCGTGCCGCCACATTTCCGCACACATCCC
GCCGTCCTATAAAACCCACACCGCACGCGGCTATACTCTGCAGATATCAGACACCAACACAGCTAGCATTAGCCCCACCA
ACA-----------------CCAC-------------------TGACAGTACCAGCTAGCT-------------------
--A-------GCTTGCAGCTGCTGCTTGCGC---TTAGACTT-CAAGCTTGTGATTCGGCCGCATAC----GTACTCAAG
CTA---GCTTTCTCATGGCGCCAGCGTCGAAGGTCATGAGCCA---CGTCGTCCAAGACGGCGGCATTGCCGACTATGCC
GTTTACGCCGCCGCGCCATGTGACGCCTGCTGCGGCGGGTGGCATAGAAAGACCGAGTCGGATGGCGACGACGACGATGA
CGACTATGACTGCGCGCCTGCCGCCTGAAGTGCACGTTCGTGCC----TGGTCGCCCGACGAAACGAACCTGGAACCTGC
CGGCCAAGAGCTAGTATGAATG----------------------------------------------------------
--------------TATCCCCCTCCCACCTAGTAT-------------------AGG-----------------------
-------------------------TAATTAACCCACCG-----TG-----CTCGCT-AAATATGCTGAGAATAGCTATG
C----CTAGTTGCCTACTCGTA---TAGATACTGAAA-GTAGGCTTGTGCTTGGAGTTCA--------TCGACTAGCT--
--TGTTATACTGCA------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ATAAAACTGGTATCTTGATCAGTACA--TCACTACCTTACTGT------------------
--------------------------------------------------------------------------------
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>chr3B_517
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---------------------GAAGAAGCAGAA--------GCAACGAACGCATGCAGGCGACGGAATA----TATATCC
GCACCGAATTGCAATAAAGTGCGAAAT-----GTC-----ACCCGATCGAGATGCCGTTGCTAAA-GACTCCTAG-----
---------TGATCTGCATCGACGGTTCTAG----CTAGCTAGCCTTTTCCACCTCCCG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTAGCTCGCTGCGGGCGTGGCCCGC------------CATCGTCCTCGCGATTCCTTC
CTCCACGTCGGGTGGTCAGGGCCACCCGGCACCGGAGCCG-CCGCAGCCACTGGCATGTAGACCGTGCTGGTCCCGGGCT
CTCACCTGTCAGCGGCATGGTGGTGCCGGCGAGGCTCCCCGGCTGCTGACTGTGTGGCGCCGCG-CCC-GTGCCGCGCCA
TGGCCATGCACGCAGCGGCATGTCCGACGCACGCTCCTAGCGCTCCCGGCCGCGTGCCGCCACATTTCCCCACACATCCT
GCCGTCCTATAAAACCCACACTGCACGCGGCTATACTCTGCAAGTATCAGACACCAACACAGCTAGCATTAGCACCACCA
ACA-----------------CCAC-------------------TGCCACTACCAGCTAGCT-------------------
--A-------GCC-------------TGCGC---TTAGACCT-CGAGATTGTGATTCGGCTGCATAA----TCAAGCTAG
CTA---G-TTTCTCATGGCGCCGGCGTCCAAGGTCATGAGCCA---CATCGTCCAAGACAGCGGCATTGCCGACTATGCC
GTTTACGCCGCCGCGCCGTGTGACGCCTGCTGCGGCGGGCGGCATAGGAAGGCCGAGTCAGACGGCGACGACGATGACGA
CGACTATGACTGCGCGCCTGCCGCCTGAAGTGCACGTTCGTGCC----TGGTCGT-CGGCGAAACGAATCTGGAACCTGC
CCGCCAAGAGCTAGCATGAATG----------------------------------------------------------
--------------TATCCACCCCAATATAT-------------------------------------------------
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>chr3B_683
--------------------------------------------------------------------------------
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-------------------------GCTCGCTGCCGGGCTGGCCCTC------------CATCCTCCTCGCGATTCCTTC
CTCCACGTCGGGCGTTCCGGGCCACCCGGTACCCCAACCG-CCGCAGCCACTGGCATGTAGACCGCGCCGGTCCCGGGCG
CTCACCTGTCAGTGGCATGGTGGTGCCGGCGAGACTCCCCGGCTGCTGAGTGTGCGGCGCCGCG-CCC-GTGCCGCGCCA
TGGCCATGCACGCAGCGGCATGTCCGACGCACACTCCCCGCGCTCTCGGCTGCGTGCTGCCACATTTCCCCACACATCCT
TTCGTCCTATAAAACCCACACCACACGCGGCTATACTCTGCAAGTGTCAGACACCAACACAGCTAGCATTAGCACCACCC
GTCGGCCAGATCGCCACTGCCCAC-------------------TGCCAGTACCAGCTAGCT-------------------
--T-------GCTTGCAGCTGCTGCTTGCGC---TTAGACTT-CAAGCTTGTGATTCCCTGCA---------TACTTAAG
CTA---G-GTTCTCATGGCGCCGGCGTCGAAGGTCGTGAGCCA---CGTCGTCCAAGACGGCGGCATTGCCGACTATGCC
GTTTACGCCGCCGCGCCGTGTGACGCCTGGTGCGACGGGCGGCATAGGAAGGCCGAGTCAGACGGCGACGACGATGATGA
CGACTATGACTGCGCGCCTGCCGCCTGAAGTGCACGTCCGTGCC----TGGTCGCC-GGCGAAACGAATCTGAAACCTGC
CCGCCAAGAGCTAGTATGAATG----------------------------------------------------------
--------------TATCCACCCTAATATATGAGG------CAGC--------GAGGTGTGCTTTTTGCAACCGGGAAGT
A--------G----TTCG--------------------------TG-----CTCGCT-AAATATGCTTGGTTTAGCTATG
C----CTAGTTGCCTACTCGTA---TAGATATTGAAAAGTAGGCTTGTGCTT----TTCAAGTTTTCATCGACCAGCT--
--TGT--TACTGCA------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ATAAAACTGATATCTTCATCAGTATACATCACTACCTTACTGTCTGAGACCGGCCTTCAAT
TAAACTGATATCTTGATCAGTAGCACTCCGTACATCACAAATTTTCGTTACTGTTTATGTACGTATATGTTGTTGCT---
--------CTGCCGAATCATTGCATGCTCTTG------TATATGTTCGCA-----------------------------T
AAACTTTTGGTGC-TCGCTTCACTTGTTTAGTTTGCATCT-GGTAAGAGT---CAACAGCCCGGCTATCCAATTTCATTT
TGT-------------------------------GTTGATTTTTCTTACAGCAGAATTCGTTTTTCCTTCCACAAATCTT
CTCTCC--TATATGTCTAATCACTATTATTTTTTTCCTTTCTTTCTTTCTGAAACATACGACCACAC-TTTGCTGAATTT
CAATGTTTTATTA-TCAACTTGCTAGCTTTGTGTCAAAAAA----CATCTTACA-TTTGGGAGGGAGGGAGTAGCTAGTA
GCCTACTACAGTATGATTCTAGATA------------------TGAACTTATTTATG------------CATTCAGCTAT
ATGGTGTGCATGCTACAATTGCATATAGGCAT-TGCTCCACTCCATC--ATATATATACATCTGCCCACATTCATATTTC
TACATGCCGAACACTTCGATATGTAGCTCCTAAGGAAAACAA-GA-GGAAAAAAATTGAGCACCACAGGCAACTCATAGA
CATATTATTGTTTTAGTTATTATATATAGTTGTGTCGATCATTGGATATGTTCATGGCTATTATACACAGGCCCGGTCCT
AAGATTTT-GGAGCCCGGGGTGAAATTAGAATGTAGGCCCCTTAAATTTTTAATTATTTATTTATAAAAAGGTTAAAGAT
AATTATGTCGAAAGAAAGATGAACATGGTTGTACCATCTTCGAAATCGCTTCCTCGAGGTGGCCGCTGGACAA-----GG
TGCGGTCTCCTATCGGTAACTCGCCTCTCATTGTGGTCGCGTGAGAGAGTGATCTAGAATATTCGGCTAGGGAGCATAGG
AGATCAAACATTGACCGTTAAGCAGCAGGACAAGGGATGATCACATATGACGTCAAGACAAGTTGCCTTTACCATGGTGG
AGGACGAACTATTTTCTTCTTC---TTTTTTGTATAGTGAAACCAATGGCACAAGGAGAATGTTTTGTGACATAAAATGT
ATAATCAGCTACAGAGCAACTACACAATCAGCATATGCGAATATATTAGGACCATTGAGATTATCAATGTACATC
>chr3D_2150
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----------------------------------------------------TTATG------------CATTCAGCTAT
ATGGTGTTCATGCTACAATTGCATATAGTCAT-TGCTGCACTCGATC--ATATATATACATCTGCCCACATTCATATTTC
TGCATGCCGAACACTTCGATATGTGGCTCATGAGGAAAACAA-GA-GGAAAAAAATTGAGCACCACGGGCAACTCATAGA
CATATTATTGTTTTAGTTATTATA----GCTGTGTCGATCATTGGATATTTTCATGGCTATTATACACAGGCTCGGTCCT
GAGATTTT-GGGGCCCGGGGCAAAATTAGAATGTAGGCCCCTTAAAATTTTAATTATTTATTTATAAAA-GGTTAAAGCT
AATTATGTTGAAAGAAAGATGAACATGGTTATACCATCTTCGAAATCGCTTCCTCGAGGTGGCCGCTGGGCATGGTGTGG
TGTGGTCTCCTATCGGTAACTCGCCTCTCATTGTGGTCGCGTGAGGGAGTGATCGAGAATATTCGGCTGGGGAGCATAGG
AGATCAAACATTGGCCGATAAGCAGCAGAACAAGGGGTGCTCACATATGACGTCAAGACAAGTTGCCTTTACCATGGTGA
AGGACGAACTATTTTCTTATCT---TTTTTTGTATGGTGAAACCAATGGCACGAGGAGAATGTTTTGTGACATAAAATGT
ATAATCAGCCACAGAGCAACTACA--ATCAGCATATGCGGATATATTAGGACCATTGAGATTATCAATGTACATC
>SNPs
SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S----------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S------------------------------------------S--------------S---------------
---------------------------SSSSS------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S---------------S------------------
---------------------------------S----------------------------------------------
-------------------------------------------------------S------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
----------------------------------------S---S----------------------------------S
--------------------------------------------------------------------------------
-----------------------------------------------SSS------------------------------
----------------S--------------------S-SSSSS-------------------------------S----
------------------------------------------------------------------------------SS
SS------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------SSS---------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
----------------------------S--------------S----------S-------------------------
----------------------SSSSSSS--SSSSSSS-S-SSSSSSSSSSSSSS-SSSSSSSSSSSSS------S----
--------------------------------------------------------------------------------
-----------------S---------------------------S-----S-----------------S--------S-
-------------------------------S------------------------------------------------
--------S-------------S-----S----------------------------------S----------------
------------------------------------------------------------------------S-------
-----------------S--------------S-----------------------------------------------
---------S----------------S-----------S-----------------------------------------
----------------------SSS-------------------------------------------------------
---------------------------------------------------------------------------
>forward_252
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TGTGCTAT
AAGGCGTGTGGG--------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1805
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------ACGGCGAAACGAATCTGGAA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>forward_253
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TGCTAT
AAGGCGTGTGGGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2612
--------------------------------------------------------------------------------
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---------------------------------------------------AACAACAGGCCGGCTATCC----------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
