>input_sequence_65761
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----------------------------------------ATGCGTCAGCAGCTAATTGGGACTCAGAATCTTGATCATG
AGCTGGCCTCAATCATTTTCAGAAGATATTCTCAGTCTGACCAGGAAGCTAATAGTGAGTGCCCATGCCTAAATTGGAGG
CACAACATGGAACCTGATTTTGCGGTAAATCCATCCTTATCACAATGTCTAACCAATCTTTTTCTGGTTGCTCAACCATG
TAATAAGTATGTTCAATTATACATAACTGATTTCTAATCTTTCAGACATTTTCTTCCTATGTTTTTTCTTTTGCAATGCT
AGACATTTGTGCTGGCCAACCATGAATATCTGAACAATATTTCGATTCAGAACCAACTCGGCGGCAAGGACTTCCCTTAT
GATATAATCTCCTCCCAGATGGTACTCCTGCCGATTTTCCCTCGCAGTTTTCTGAAAATAATAACTAGATGTATTTGATT
GACGTTCCTGTCTTAAAAAATTCTTCAGAAACCCTAACAACTTATGTCTTTTGTACACAGTTTTTCATACCAGTACCTCT
AGAGGATGGATGGGTCGTACTGATGTGGGACATGATGTCAAGGAAGCCGCACATCCTGGACCTGATGATCAGAGGCGATG
GTCCAACTGAACCAACAAAGGATAAGCTCGAATTGATAGCTTGGAAGCTACATCATGCACTATTCCATTGTCTGAACGAG
TACTATGCTGGCTGGCTGGCCTACGCAAGACGGAGAGTGGGAGGCCCACTACGCACTTGTTGCAATGAAACATTTGTCAG
GTTTGTAATAGCCACACAGTACTCGTCAGCCATCTCAAAACATTTGTTTTACCAAACATTCTACTGATTTTGCATCATCT
CAAACTTACTTCAGGGACGAAACAGGGGGATGTGTACTCCACATTGGACGAACGACACCAAGCTGA--------------
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>chr4D_1_TraesCS4D01G276800
CAGGAGTTGGGGTCCACCGTCGTTCGGATGCATCTCCGACGAGGTCGGCGCACTCACAGAGTCAATCTAGAGGCACCTGG
GTGGACAAAAAGGTCTGAACACAAACTCACCTGTGGATGGTCTGTATTTTGTTTGACTGTGACTGCAAGTTCGTCTCCAG
TGCACATGTTTTGTCAGTAAATTGGCTTAGTTTCAAATAATCGCTTGCAAAAAAGATCAAATTCAAATAGTGAGCTGTGT
GTTTGCAGCCCATCTGTAGTGGTGCCCAGTTTAACAGTCATAACCGCATTCACTATACTGTTAGTATTGATGCAGTAGAA
CTAATAGGCTGAATATTACTCTTGTACTAGAACTCGTAGTCTGAATCTTGTCAAAAAAGAACTCGTAGTCTGAATAATGA
ATGCTTGGAAAAGTGCAGGTTACGGCTGAGCAGTGCGCCACCTGACAGGACATCACGTCCCTCTCGGATGAGCGCTTTGG
AGCAATCGATTCGCAAATACACAGAGGAACCTACAATGAGGACTGTACTTCCGCTAGCAAGAGGTCTACTCTGGCAGCAT
GCAATGTGATGAACTATTTTCAATAAACGCTTAGGTCAATCGCGCAAATATATGCCGATTTTCTAGCAAATACAACTGCA
ACTCTATTTGGCCAATCTCAGAGCAAGCTACCAAGACGGAAGTACATTTTTTAGCATGGTTTTGCAACTGACCCATTGGG
ACGGGGGGTTGTGCCGCATCCACCACAAGCTGCCACCACCGACCTTATTGTGATATTGTCACACATTTCTGCAAAACTTC
AGACAAGGAACTTCATAGGTAATGATTTCTTTCTTTTGTACATGGTTTTTGCTTTTGCTGACTGCATTTTGCTGATACTT
AGGCACTCTAAGTCTTTGATGTCCAGTTTTTGTAGCAATTCCAACATTTTATCTTTTCTTTCTAGGTACTATTATCTTAT
TCATGCCACTCCAAGAATTATTCGCATTTCTGGGGTTGCCATGCGTCAGCAGCTAATTGGGACTCAGAATCTTGATCATG
AGCTGGCCTCAATCATTTTCAGAAGATATTCTCAGTCTGACCAGGAAGCTAATAGTGAGTGCCCATGCCTAAATTGGAGG
CACAACATGGAACCTGATTTTGCGGTAAATCCATCCTTATCACAATGTCTAACCAATCTTTTTCTGGTTGCTCAACCATG
TAATAAGTATGTTCAATTATACATAACTGATTTCTAATCTTTCAGACATTTTCTTCCTATGTTTTTTCTTTTGCAATGCT
AGACATTTGTGCTGGCCAACCATGAATATCTGAACAATATTTCGATTCAGAACCAACTCGGCGGCAAGGACTTCCCTTAT
GATATAATCTCCTCCCAGATGGTACTCCTGCCGATTTTCCCTCGCAGTTTTCTGAAAATAATAACTAGATGTATTTGATT
GACGTTCCTGTCTTAAAAAATTCTTCAGAAACCCTAACAACTTATGTCTTTTGTACACAGTTTTTCATACCAGTACCTCT
AGAGGATGGATGGGTCGTACTGATGTGGGACATGATGTCAAGGAAGCCGCACATCCTGGACCTGATGATCAGAGGCGATG
GTCCAACTGAACCAACAAAGGATAAGCTCGAATTGATAGCTTGGAAGCTACATCATGCACTATTCCATTGTCTGAACGAG
TACTATGCTGGCTGGCTGGCCTACGCAAGACGGAGAGTGGGAGGCCCACTACGCACTTGTTGCAATGAAACATTTGTCAG
GTTTGTAATAGCCACACAGTACTCGTCAGCCATCTCAAAACATTTGTTTTACCAAACATTCTACTGATTTTGCATCATCT
CAAACTTACTTCAGGGACGAAACAGGGGGATGTGTACTCCACATTGGACGAACGACACCAAGCTGAAGATTCCTCTCACC
AAGGTGAATTTTTGTTTCGCACTGTCTACTTTTGCTGTCTTTCTTCATTAGAACAGAGATAATAAGATTTGACTACAACA
AACACAAATGTATCTGTCATACGCAGCACAATCACTACAACACAGATATTAACCGGAGGCGTTTTTATAAAGGCATCTAT
TGAAACGCCTCAAAATCATGTTTAGGAAGGCATTATTCTAAAACGCCTTTGTTGGATGTACCTTTGAAGGCACTTATACA
AAACGCCTTGGAATGGAGGCAGCATTGAAGGTGTTTCTTCAGAACGCCTCGGATTGGGGGTAGCTTTGGAGGCACTTTTC
AGAAAAGCCTCAGATTGATGAGGATTTGAGGCGTTTCTTCA---------------------------------------
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---------------------------------------------------AGAGGCGTGGGCGGTCCTGGGTCCTGAAC
TTTCTTGTTGTTGCGCTTACTGTTGAGTGCAGACGAT-------------------------------------------
---------------------------TTTAAAAATGCCTCAAACTGGAGTGACCATGGCGTTCTTGAAAAGTGCCGACG
TACGTCTATGCCGTCGTGATAGTCCTTGGCGC-TTTTTACAAATGCCTTGATAGACTTTTGGAGGCAAT-TTTTAGAGCT
TTCAAAGGCATTTTTAATGCCTCCTAATTGCTACCGTGTTGTAGGAGGCATTTTTAGAGCTTTCAAAGGCATGTTTAATG
CCTCCTAATTGCTAACCGTGTTGTAGTGAATGTTGGCAAAACTAAAAGACAAGCACTTCATGACTGCCTCAAACTACAAG
GAAATGCCTCTAAATTGGCTCATGAAGCTCTCTGGTCGGTTCTAGCTCCAACAGATTCTTGGTTCGGCTCAATCCAGTCT
GGTTAGGACCAGCAAACCCCTCCATTTGGAGCGTACTAGCGCAACACCTCCTTCTCGTTCAACTCAAATTGCTATGCTTC
ATATTGTATTTTCAGATTATATTCTGTACTGTTTGCTATTTCAATCGTGATTTTAGCAACTTTTCCGCGGCCCTCTGCGT
GCAACCTATGCAACTCTTTATCCTAATT
>chr4D_1
CAGGAGTTGGGGTCCGCCGTCGTTCGGATGCATCTCCGACGAGGTCGGCGCACTCACAGAGTCAATCTAGAGGCACCTGG
GTGGACAAAAAGGTCTGAACACAAACCCACCTGTGGATGGTCTGTATTTTGTTTGACTGTGACTGCAAGTTCGTCTCCAG
TGCACATGTTTTGTCAGTAAATTGGCTTAGTTTCAAATAATCGCTTGCAAAAAAGATCAAATTCAAATAGTGAGCTGTGT
GTTTGCAGCCCATCTGTAGTGGTGCCCAGTTTAACAGTCATAACCGCATTCACTATACTGTTAGTATTGATGCAGTAGAA
CTAATAGGCTGAATATTACTCTTGTACTAGAACTCGTAGTCTGAATCTTGTCAAAAAAGAACTCGTAGTCTGAATAATGA
ATGCTTGGAAAAGTGCAGGTTACGGCTGAGCAGTGCGCCACCTGACAGGACATCACGTCCCTCTCGGATGAGCGCTTTGG
AGCAATCGATTCGCAAATACACAGAGGAACCTACAATGAGGACTGTACTTCCGCTAGCAAGAGGTCTACTCTGGCAGCAT
GCAATGTGATGAACTATTTTCAATAAACGCTTAGGTCAATCGCGCAAATATATGCCGATTTTCTAGCAAATACAACTGCA
ACTCTATTTGGCCAATCTCAGAGCAAGCTACCAAGACGGAAGTACATTTTTTAGCATGGTTTTGCAACTGACCCATTGGG
ACGGGGGGTTGTGCCGCATCCACCACAAGCTGCCACCACCGACCTTATTGTGATATTGTCACACATTTCTGCAAAACTTC
AGACAAGGAACTTCATAGGTAATGATTTCTTTCTTTTGTACATGGTTTTTGCTTTTGCTGACTGCATTTTGCTGATACTT
AGGCACTCTAAGTCTTTGATGTCCAGTTTTTGTAGCAATTCCAACATTTTATCTTTTCTTTCTAGGTACTATTATCTTAT
TCATGCCACTCCAAGAATTATTCGCATTTCTGGGGTTGCCATGCGTCAGCAGCTAATTGGGACTCAGAATCTTGATCATG
AGCTGGCCTCAATCATTTTCAGAAGATATTCTCAGTCTGACCAGGAAGCTAATAGTGAGTGCCCATGCCTAAATTGGAGG
CACAACATGGAACCTGATTTTGCGGTAAATCCATCCTTATCACAATGTCTAACCAATCTTTTTCTGGTTGCTCAACCATG
TAATAAGTATGCTCAATTATACATAACTGATTTCTAATCTTTCAGACATTTTCTTCCTATGTTTTTTCTTTTGCAATGCT
AGACATTTGTGCTGGCCAACCATGAATATCTGAACAATATTTTGATTCAGAACCAACTCGGCGGCAAGGACTTCCCTTAT
GATATAATCTCCTCCCAGATGGTACTCCTGCCGATTTTCCCTCGCAGTTTTCTGAAAATAATAACTAGATGTATTTGATT
GACGTTCCTGTCTTAAAAAATTCTTCAGAAACCCTAACAACTTATGTCTTTTGTACACAGTTTTTCATACCAGTACCTCT
AGAGGATGGATGGGTCGTACTGATGTGGGACATGATGTCAAGGAAGCCGCACATCCTGGACCTGATGATCAGAGGCGATG
GTCCAACTGAACCAACAAAGGATAAGCTCGAATTGATAGCTTGGAAGCTACATCATGCACTATTCCATTGTCTGAACGAG
TACTATGCTGGCTGGCTGGCCTACGCAAGACGGAGAGTGGGAGGCCCACTACGCACTTGTTGCAATGGAACATTTGTCAG
GTTTGTAATAGCCACACAGTACTCGTCAGCCATCTCAAAACATTTTTTTTACCAAACATTCTACTGATTTTGCATCATCT
CAAACTTACTTCAGGGACGAAACAGGGGGATGTGTACTCCACATTGGACGAACGACACCAAGCTGAAGATTCCTCTCACC
AAGGTGAATTTTTGTTTCGCACTGTCTACTTTTGCTGTCTTTCTTCATTAGCACAGAGATAATAAGATTTGACTACTACA
AACACAAATGTATCTGTCATACGCAGCACAATCACTACAACACAGATATTAACCGGAGGCGTTTTTATAAAGGCATCTAT
TGAAACGCCTCAAAATCATGTTTAGGAAGGCATTATTCTAAAACGCCTTTGTTGGATGTACCTTTGAAGGCACTTATACA
AAACGCCTTGGAATGGAGGTAGCATTGAAGGTGTTTCTTCAGAACGCCTCGGATTGGGGGTAGCTTTGGAGGCACTTTTC
AGAAAAGCCTCAGATTGATGAGGATTTGAGGCGTTTCTTCA---------------------------------------
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---------------------------------------------------AGAGGCGTGGGCGGTCCTGGGTCCTGAAC
TTTCTTGTTGTTGCGCTTACTGTTGAGTGCAGACGATTTTAAAAATGCCTCAAACTGGAGTTACCATGGCGTTCTTGAAA
AGTGGCTTACTGTCGAGTGCAGGCGATTTTAAAAATGCCTCAAACTGGAGTGACCATGGCGTTCTTGAAAAGTGCCGACG
TACGTCTATGCCGTCGTGATAGTCCTTAGCGC-TTTTTACAAATGCCTTGATAGACTTTTGGAGGCAATTTTTTAGAGCT
TTCAGAGGCATTTTTAATGCCTCCTAATTGCTACCGTGTTGTAGGAGGCATTTTTAGAGCTTTCAAAGGCATGTTTAATG
CCTCCTAATTGCTAATCGTGTTGTAGTGAATGTTGGCAAAACTAAAAGACAAGCACTTCATGACTGCCTCAAACTACAAG
GAAATGCCTCTAAATTGGCTCATGAAGCTCTCTGGTCGGTTCTAGCTCCAACAGATTCTTGGTTCGGCTCAATCCAGTCT
GGTTAGGACCAGCAAACCCCTCCATTTGGAGCGTACTAGCGCAACACCTCCTTCTCGTTCAACTCAAATTGCTATGCTTC
ATATTGTATTTTCAGATTATATTCTGTACTGTTTGCTATTTCAATCGTGATTTTAGCAACTTTTCCGCGGCCCTCTGCGT
GCAACCTATGTAACTCTTTATCCTAATT
>chr2D_2033
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--------------------------------CACTACAACACAGAAATTAATCAGAGGCGTTTTTATAAAGGCATCTAT
TGAAACGCCTCAAAACCATGTTTAGGAAGGCACTATTCTAAAACGCCTTGGTTGGATGTACCTTTGAAGGCACTTTTACA
AAACGCCTCGGAATGGAGGCAACATTGAAGGCGTTTCTTCAGAACGCCTCAGATTGGGGGTAACTTTGGAGGCACTTTTC
AGAAAAGCCTCAGATTGATGAGGATTTGAGGCGTTTCTTCAGATTGCCTCCAAACTGACCGCTGTTGCAGCAGCAGCGCT
GGCGCATAGAAGAAAGCGGACAACGCGCAGGGCATGCATCATCCGTTTGGAGAAGGGAGAGCCGCTGCAATCTTTGTCGT
GAGTACTGCGGTCTGCGGGTAGCTGCTAGAGTGTATAAAAAACGTACTTTCTGACAGAGAACAGGTAGGACGTTGGAACA
GGTAGCTGTTTAGTCCCATACTGCTTACAGAGAGGAAAATTTGCCTGTTTAAAAGGAGAGCCGTCTTATGTCTGATAAGC
ATTCTTGTAGTACAAATGTAGGCGTA------------------------------------------------------
---GGCTTACTGACGAGTGCAGGCGATTTTAAAAATGCCTTAAACTGGAGTGACCATGGCGTTCTCAAAAAGTGCCGACA
TAAGTCTATGCCGTCGCGACAGTCCTTAGCATTTTTTTACAAATGCCTTCATAGACTTTTGAGAG-AAT-TTTTAGAGCT
TTCAAAGGCATTTTTAATGCCTCCTAATTGCTACTGTGTTGTAG------------------------------------
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>SNPs
---------------S----------------------------------------------------------------
--------------------------S-----------------------------------------------------
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-----------S--------------------------------------------------------------------
------------------------------------------S-------------------------------------
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-------------------------------------------------------------------S------------
---------------------------------------------S----------------------------------
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---------------------------------------------------S------------------------S---
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---------------------------S----------------------------------------------------
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---------------S----------------------------------------------------------------
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----------S-----------------
>forward_107
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--GGACAAAAAGGTCTGAACACAAACT-----------------------------------------------------
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>reverse_1323
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------------------------------------------CGATTCAGAACCAACTCGGC------------------
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>forward_1212
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------------------------------------------------------------------GTTGCTCAACCATG
TAATAAGTATGT--------------------------------------------------------------------
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>reverse_2748
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---------------------------GGCGCTTTTTACAAATGCCT---------------------------------
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