>input_sequence_65758
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------------------------------ATGGCCGCCTCCCGCCGCCTGGCGCGGAAGCTCCCCTCCATAATCTCCAA
GCACCAGCGCCTCATCTCGCCGGAGATCGAAACCCTAGAGGAGACCCCCGAAATCTCCACCTCCCCCGCCTCCATCCCCC
TCGACCCCTCCCTGCCGCTCCTCCCGCTCGCCGTCTCCCACCTCTCGCCGCCGAGCCCCGTCCCGGCTCTCCCCTCCGCG
CACGCCTCCTCCCCGGAGGCGCTCCTCCGCCTCCTGCACCGCGCGCGGCACCACCCGCGCCTCGCGGCGCTCGACCTCCA
TCTCCTCCTCGCGGCCGCCGACGCCTCCTCGGCCTTCCGCCCCGACCACCGCCTCACGAGCCTCCTCGCCGCGCGCCTCG
CAGCCTCCCGCCGCCTCCCCTCGCTGCGGCGCCTCCTCCAGCTCGTCCTCTCCCGCCCCTGCCCCTGCGCCGACGACTCC
ATCTTCGCCTGCCCCGATCTCCTCCCGACCTTCCGCAAGGCCATCCTCGCCTTCGCCACCTCCGGCGACATCCCCGCGGC
GTCCGAAGCCCTCGCGTCCCTCCGCCGCGCCGCGGACTCGCCCCTCCCCGCCGAGTTCTACAACATCATTCTCCACGCTC
TCGCCCGTCTCCACCGCCACGACGACGCCATCCGCTTCTACGGCGAGATGACCAGTGTCCACCGCGTCGCACCGGATGCC
TACACCTTCAACATACTCATCAACAGCTCCTGCCGCGTGGAAGGCGTTGATGCCGCCATGGGGTGGTTCGAGGAGATGCA
ACGCCGGAGCTGTGCACCGACTGGTGTGAGCTTCAATACTCTTATGCGCGGGTTCTTCAGAGAAGGAAGGCACAAGGAAG
GGCTTAAGGTTGCTCATGAGATGTTGCAGCTTGGGGTCGGCCTGTCGGTTGCTTGA------------------------
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---------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G409300
AATTACTATCTAGGGTTAAACCCTTGCTAAAGTGTTCTTCCATAGAATAAGTGTCGATTTGGTTTGAATATTAGTCGGGT
CTGTCAATTGGTGTCATAGCCTCTAGGTTCTTGGTTGCGTGATGGTTCTCAAGGCATGAGAGCACCTCCAACCAGATGCC
TAACCTGACCTCCTATATGTGCGCGGATGCATTCGAACAGTCCATGCACGTAGTTGCGCCCCTCAAATTATCCGAACACA
TGTGTATGATTGGTGTGGAGAGAGAGAGAGAGAGAGAGAGAAGAAAAAAGATGGTCCAATGTGGTCCGGGATCTGAAGTG
GCGGGCTATCCGGACACGTCTGGACGCCCTCCCCCACATATGGACTGAATTTGGAGGTTCCCCGACAGCCCGATGTATGA
GCGGTTTGGTTGATAGTCTTCTCCTATTCAGATTGTCCGTCCAACATAATGGGGAGGATTTGAGGCCCCCGGTTGAAGAT
GCTCTTAGGAGTTGGAAATTTACACATAAACAAGTCTAATGTTCACAGTAGTAGTGTTTCTGCCCAGGAAGGTTCCAATC
TGCTAGAGTTCTGCATTTAGTATCCACCTTGAAATTTGGGATGGTCTTTGTGAAATGAGAGATCATCCAAAGTAGAAATA
TGAATGTAAATAATGTAACTTCTTTAGGACACAGGGAAATTTTTAATATTTTTCTCAATTAATATATATTTTGAATATTT
TTTGGAACAGCTCACAATGGAATTTTTTAAGTGAAAATATATTTTCCAGAGGGAAAAATTGTTTTTTTTTGAGAAAAAGA
GAGAAATATTTTTTTTAGAAATAGAGGGAAATATTGAATAGTGCTCGTACTATATTCTGGGCTTCGCCAGTGGATCTAGT
ATCATGTAGCCCATGTCCCATGGATTCGTCGA------ATACATTTCTGCGTGTGGGCCAAGCCCA-------TCCGACT
GCCCCAGCCACACAC---------ACCTCTCCTCCGA------CCCCCCT--T---------------------------
--------------------------------------------------------------------------------
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-------------CCCTCCCGCGGCCGGCGATGGCCGCCTCCCGCCGCCTGGCGCGGAAGCTCCCCTCCATAATCTCCAA
GCACCAGCGCCTCATCTCGCCGGAGATCGAAACCCTAGAGGAGACCCCCGAAATCTCCACCTCCCCCGCCTCCATCCCCC
TCGACCCCTCCCTGCCGCTCCTCCCGCTCGCCGTCTCCCACCTCTCGCCGCCGAGCCCCGTCCCGGCTCTCCCCTCCGCG
CACGCCTCCTCCCCGGAGGCGCTCCTCCGCCTCCTGCACCGCGCGCGGCACCACCCGCGCCTCGCGGCGCTCGACCTCCA
TCTCCTCCTCGCGGCCGCCGACGCCTCCTCGGCCTTCCGCCCCGACCACCGCCTCACGAGCCTCCTCGCCGCGCGCCTCG
CAGCCTCCCGCCGCCTCCCCTCGCTGCGGCGCCTCCTCCAGCTCGTCCTCTCCCGCCCCTGCCCCTGCGCCGACGACTCC
ATCTTCGCCTGCCCCGATCTCCTCCCGACCTTCCGCAAGGCCATCCTCGCCTTCGCCACCTCCGGCGACATCCCCGCGGC
GTCCGAAGCCCTCGCGTCCCTCCGCCGCGCCGCGGACTCGCCCCTCCCCGCCGAGTTCTACAACATCATTCTCCACGCTC
TCGCCCGTCTCCACCGCCACGACGACGCCATCCGCTTCTACGGCGAGATGACCAGTGTCCACCGCGTCGCACCGGATGCC
TACACCTTCAACATACTCATCAACAGCTCCTGCCGCGTGGAAGGCGTTGATGCCGCCATGGGGTGGTTCGAGGAGATGCA
ACGCCGGAGCTGTGCACCGACTGGTGTGAGCTTCAATACTCTTATGCGCGGGTTCTTCAGAGAAGGAAGGCACAAGGAAG
GGCTTAAGGTTGCTCATGAGATGTTGCAGCTTGGGGTCGGCCTGTCGGTTGCTTGA------------------------
--------------------------------------------------------------------------------
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-----------------TTGAGTGTCCCTGCTGGCATAACGGTTCTGGATTGCTTGATGAAGGCAGGGAAGCTGGATGAT
GTGTGCCGGTTGATGGGAAGGATGGTTGAGGAGGGGATTGTACCAGATACCATATCTTGTAACTCTATCTTGGAGGCACT
TTGTGAAGCT-GGGCGGACTTCTGATGCAAACAAGCTGAGGATTCTGGCTAAGGAGAAGGGTTTTCAGGCTGATGGTGTG
ACTTATAGCATGCTGGTGCAGGGGTTTGGTAGGCAGGGAAGGGTGACGGAAGGCGAGGCTGTGTTGGATGAAATGCTTGA
TTTAGGGTTTATACCTAACATTGTGGCTTACAATAGGCTTCTTGATAGCTTACACGTGCGGAGATCTTTGCAATAACAAG
TGAACTCCTCTAGGCATGTGTATGCTCCAAACATTTGTT-GGCCACATGGAAGCATCAAACTGCAAGATGTCAGAGAGTT
GGAGCTTAGAATTCATGTGCAAAGACTTTTGGAGGAACATAAAACAAAACAAGGGATAGTCAGATAGATGGCAGTTGAGA
CGAGCGGTGGTCATAATTGCACTGACAGAAGT------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGCGAAATTCCAATGATTCGAATGAGGTATTG
TTTTGATTATGCCCTTTAGTTTGAACATTAGTCTTGATTTTGTTGTCTGCACACATTGTTGCTTCTTAGTTAAAGCACCA
TTGGCCATTGTCTTGGACTCATGGTATCTGTAAATAGTTATGTGATTCACTGATTTGTTCGTCCTCCTACGGGATCTATA
TTTACTTTGTTCGTCAACGATGCAAACAGCCAACCCGCCAAGCCTGCATATAGCTATACCATTTTTTGGAATAGATATAT
AACTATATTTAAAGTCAACTTAGTGGTTGTTTGGATTGGAAGAAATTAAACTGGGTTATCAGAAAACAAGTTTTAGGAGA
GATTTTAGGAAAATGCATTTTAGTTAGTTTTTTATTAGAACCAGTTTGTGCAATTCTTTGTTTGGACTAAAAATG
>chr3B_548
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-------------------------------------------------------------------GAAGGTTCCAATT
TGGTGGAGTTCTACATTTGGGGCCCGCCTTGAAATTTGGGATGGTCTTTGTGAAATGCCAGATCATCCAAAGTAGAAATA
TAAATGTAAATAAATCTGGAATTTATGA----------------AATCTTTTTCTAAAGTAATCGATTTATTAAAGATTT
TTTAGAACAGTTCACAATGGAATTTTTGAAGTGAAAATGTATTCTCCCGATGGAAAATTTCATTTTTTTTAGAACATTTC
ACG----------------------------------ATGGCACTCGTAATGTTTTCTGGGCTTCGCCAGTGGATCTTGT
GGGCTAAG--------------------------------------------------CAAGCCCA-------T------
GCCCCGTCCACACAC---------TCCTCT-TATTC-----CCTGCCCTTTCT---------------------------
--------------------------------------------------------------------------------
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-------------CCCTCCGGCGGCCGGCGATGGCCGCCTCGCGCCGCCTGGCGCGGAAGCTCCCCTCCATCATCTCCAA
GCACCAGCGCCTCATCTCGCCGGAGATCGAAACCCTAGATGAGACCCCCGAAATCTCCACCTCGCCCGCCTCCATCCCCC
TCGACCCCTCCCTGCCGCTCCTCCCGCTCGCCGTCTCCCACCTCTCGCCGCCGAGCCCCCTCCCGTCTCTCCCCTCCGCG
CACGCCTCCTCCCCGGAGGCGCTCCTCCGCCTCCTTCGCCGCGCGCGGCACCACCCGCGCCTCGCGCCGCTCGACCTCCA
CCTCCTCCTCGCGGCCGCCGACGCCTCCTCGGCCTTCCGCCCCGACCACCGCCTCACGAGCCTCCTCGCCGCGCGCCTCG
CGGCCTCCCGCCGCCTCCCCTCGCTGCAGCGCCTCCTCCAGCTCGTCCTCTCCCGGCCCTGCCCCTGCGTCGACGACTCC
ATCTTCGCCTGCCCCGACCTCCTCCCCACCTTCCGCAAGGCCATCCTCGCCTTCGCCACCTCCGGCGACATCCCCGCGGC
GTCCGAGGCCCTCGCCTCCCTCCGCCGCGCTGCGGACTCGCCCCTCCCCGCGGAGTTCTACAACATCATCCTCCACGCCC
TGGTCCGTCTCCACCGCCACGACGACGCCATCCGCTTCTACGGCGAGATGACCAGCGTCCACCGCGTCGCCCCGGATGCC
TACACCTTCAACATACTCATCAACAGCTCCTGCCGTGTCGAAGGCGTCGATGCCGCCATGCGGTGGTTTGAGGAGATGCG
GCGACGGAGCTGTGCGCCGACTGGTGTGAGCTTCAACACTCTTATGCGCGGTTTCTTCAGAGAAGCAAGGTACAAGGAAG
GCCTTAAGGTTG--------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3B_826
GGGAAAT-------------------------------------------------------------------------
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---------------------------------TTGAATAGTAGTCGTACTATATTCTGGGCTTCGCCAGTGGAAATCGA
ATCATGTAGCCCATGGGCT-----------------------------------------AAGCCCATCTCACT------
GTCCCGGCCACACACACACTCCTCTCCTCTCCTCTGATTTGTCTCAAAAAAAAAAAAAACACTCCTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCTTCCCCTCCCGTGGCCGGCGATGGCCGCTTCCCGCCGCCTGGCGCGGAAGCTCCCCTCCATCATCTCCAA
GCACCAGCGCCTCATCTCGCCGGAGATCGAAACCCTAGAGGAGACCCCCGAAATCTCCACCTCGCCCGCCTCCATCCCCC
TCGACCCCTCCCTGCCGCTACTCCCGCTCGCCGTCTCCCACCTCTCGCCGCCGAGCCCCCTCCCGGCTCTCCCCTCGGCG
CACGCCTCCTCCCCGGAGGCGCTCCTCCGCCTCCTGCGCCGCGCGCGGCACCACCCGCGCCTGGCGCCGCTCGACCTCCA
CCTCCTCCTCGCGGCCGCCGACTCCTCCTCGGCCTTCCGCCCCGACCACCGGCTCACGAGCCTCCTCGCCGCGC------
------------GCCTCCCCTCGCTGCGGCGCCTCCTCCAGCTCGTCCTCTCGCGCCCCTGCCCCTGCGCCGACGACTCC
ATCTTCGCATGCCCCGACCTCCTCCCGACCTTCCGCAAGGCCATCCTCGCCTTCGCCACCTCCGGCGACATCCCCGCGGC
TTCCGAAGCCCTCGCGTCCCTCCGGCGCGCCGCGGACTCGCCCCTCCCCGCCGAGTTCTACAACATCATCCTCCACGCCC
TCGCCCGTGTCCACCGCCATGACGACGCCATCCGCTTCTACAGCGAGATGACCAGCGTCCACAGCGTCGCACCGGATGCC
TACACCTTCAACATACTCATCAACAGTTCCTGCCGCGTCGAAGGCGTCGATGCCGCCATGCGGTGGTTTGAGGAGATGCG
GCGCCGGAGCTGTGCGCCGACTGGTGTGAGCTTCAATACTCTTATGCGCGGGTTCTTCAGAGAAGGAAGGCACAAGGAAG
GTCTTAAGGTTGCTCATGAGATGCTGCAGCTTGGGGTCGGGCTGTCCGTTGCTTCCATGGAGATTTTGATCGGTGGGCTG
TGCCGTGGAGGCGAGGCTTCGAAGGCAGCAGAGTTATTTGCCGAGTTTTTGGTGGATGCGGTGGCGCAGGAAGGGTTTGA
TTGCTTGGATCTGGTTGAATCGCTGTGCCATGTTGGAAGGGTGGACAAAGCAGTGGAAGTGGTGGAGTTGGTATTGGAGA
GGAACAGGGCATCCTGCTTGAGTGTCCCTGCTGGCGTAACGTTTCTGGATTGCTTGGTGAAGGCGGGGAGGCTGGATGAT
GTGTGCCGGTTGATGGGAAGGATGGTTCGGGAGGGGATTGTACCAGATACCATATCTTGTAACTGTATCTTGGAGGCACT
TTGTGAAGCT-GGACGGACTTCTGATGCAAACAAGCTGAGGATTCTGGCTAAGGAGAAGGGTTTTCAGGCTGATGGTGTG
ACCTATAGCATGCTGGTGCAGGGGTTTGGTAGGCAGGGAAGGGTGTCGGAAGGCGAGGCTGTGTTGGATGAAATGCTTGA
TTTAGGGTTTATACCTAACATTGTGGCTTACAATAGGCTTCTTGATAGCTTACACGTGCGGAGATCTTTGCAATAACAAG
TGAACTCCTCTAGGCATGTGTATGCTCCAAACATTTGTT-GGCCACATGGAAGCATCAAACTGCAAGATGTCAGAGAGTT
GGAGCTTAGAATTCATGTGCAAAGACTTTTGGAGGAACATAAAACAAAACAAGGGATAGTCAGATAGATGGCAGTTGAGA
CGAGCGGTGGTCATAATTGCACTGACAGAAGT------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGCGAAATTCCAATGATTCGAACGAGGTATTG
TTTTGATTATGCCCTTTAGTTCGAATATTAGTCTCGATTTTGTTGTCTGCACACATTGTTGCTTCTTAGTTAAAGCACCA
TTAGTCATTGTCTTGGACTCATGGTATCTGTAAATAGTTACGCGATTCACTGATTTGTTCGTCCTCCTACGGGATCTATA
TTTACTTTGTTCGTCAAGGATGCAATCAGCCAACTCGCCAAGCCTGCATATAGCTATACCATTTTTTGGAATAGATATAT
AACTATATTTAAAGTCAACTTAGTGGTTGTTTGGATTGGAAGAAATTAAGCTGGGTTATCAGAAAACAGGTTTTAGGAGA
GATTTTAGGAAAATGCATTTTAGTTAGTTTTTTATTAGAACTAGTTTGTACAATTCTTTGTTTGGACTAAAAATG
>chrUn_834
--------------------------------------------------------------------------------
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---------------------------------TTGAATAGTATTCGTACTGTAATCTGGGCTTCGCCAGTGGATTG---
-TCATGTAGCCCAGGCCCCATGCACTCGTCGAAAACATATCCATTTCTGCCTGTGGGCTAAGCCCA-------T------
GACCCGGCCACGCAC---------TCCTCA-GATTC-----CCTCCCCCT--T---------------------------
--------------------------------------------------------------------------------
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-------------CTCTTCCGCAGCCGGCGATGGCCGCCTCCCGCCGCCTGGCGCGGAAGCTCCCCTCCATCATCTCCAA
ACACCAGCGCCTCATCTCGCCGGAGATCGAAATCCTAGAGGAGACCCCCGAAATCTCCACCTCGCCCGCCTCCATCCCCC
TCGACCCCTCCCTGCCGCTCCTCCCGCTCGCCGTCTCCCACCTCTCGCCGCCGAGCCCCCTCCCGGCTCTCCCCGCCGCG
CACGCCTCCTCCCCCGCGGCGCTCCTCCGCCTCCTGCGCCGCGCGCGGCACCACCCGCGCCTCGCGCCGCTCGACCTCCA
CCTCCTCCTCGCGGCCGCCGACGCCTCCTCGGCCTTCCGCCCCGACCACCGCCTCACCAGCCTCCTCGCCGCGCGCCTCG
CGGCCTCCCGCCGCCTCCCCTCGCTGCGGCGCCTCCTCCAGCTCGTCCTCTCCCGGCCCTGCCCCTGCGCCGACGACTCC
ATCTTCGCCTGCCCCGACCTCCTCCCCACCTTCCGCAAGGCCATCCTCGCCTTCGCCTCCTCCGGCGACATCCCCGCGGC
GTCCGAAGCCCTCGCGTCCCTCCGCCGCGCCGCGGACTCGCCCCTCCCCGCCGAGTTTTACAACATCATCCTCCACGCCC
TGGCCCGTCTCCACCGCCACGA----------------------------------------------------------
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---------------------------------------------------------------------------
>chr3D_912
--------------------------------------------------------------------------------
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-------------------------------A------ATCCATTTCTGCCTGTGGGCTAAGCCCA-------T------
GACCCGGCCACACAC---------TCCTCTCCTCTGATTCTCTCCCCCCT--T---------------------------
--------------------------------------------------------------------------------
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-------------CCCTCTCGCAGCCGGCGATGGCCGCCTCCCGCCGCCTGGCGCGGAAGCTCCCCTCCATCATCTCCAA
GCACCAGCGCCTCATCTCGCCGGAGATCGAAACCCTAGAGGAGACCCCCGAAATCTCCACCTCACCGGCCTCCATCCCCC
TCGACCCCACCCTGCCGCTCCTCCCGCTCGCCGTCTCCCACCTCTCGCCGCCGAGCCCCCTCCCGGCGCTCCCCTCCGCG
CACGCCTCGTCCCCGACGTCGCTCCTTCGCCTCCTGCGCCGCGCGCGGCACCACCCGCGCCTCGCGCCGCTCGACCTCCA
CCTCCTCCTCGCGGCCGCCGACGCCTCCTCGGCCTTCCGCCCCGACCACCGCCTCACGAGCCTCCTCGCCGCGCGCCTCG
CGGCCTCCCGCCGCCTCCCCTCGCTGCGGCGCCTCCTCCAGCTCGTCCTCTCCCGCCCCTGCCCCTGCGCCGACGACTCC
ATCTTCGCCTGCCCCGATCTCCTCCCGACCTTCCGCAAGGCCATCCTCGCCTTCGCCACCTCCGGCGACATCCCCGCGGC
GTCCGAAGCCCTCGCGTCCCTCCGCCGCGCCGCGGACTCGCCCCTCCCCGCCGAGTTCTACAACATCATCCTCCACGCCC
TCGCCCGTCTCCACCGCCATGACGACGCCATCCGCTTCTACGGCGAGATGACCAGCGTCCACCGCGTCGCACTGGATGCC
TACACCTTCAACATACTCATCAACAGCTCCTGCCGCGTCGAAGGCGTCGATGCCGCCATGCGGTGGTTCGAGGAGATGCG
GCGCCGGAGCTGTGCGCCGACTGGTGTGAGCTTCAATACTCTTATGCGCGGGTTCTTCAGAGAAGGCAGGTATAAGGAAG
GCCTTAAGGTTGCTTATGAGATGCTGCAGCTTGGGGCCGGGCTGTCGGTTGCTTCCATGGAGATTTTGATTGGTGGGTTG
TGCCGTGGAGGCGAGGCTTTGAAGGCAGCCGAGGTGTTTGCGGAGTTTTTGGTGGATGCGGTGGTTCCGGAAGGGTTTGA
TTGCTTGGATCTTGTTGAATCCCTGTGCCATGTTGGAAGGGTGGACAAAGCAGTAGAAATAGTGGAGTTGGTATTGGAGA
GGAATAGGGCATGCTGCTTAAGTGTCCCTGCTGGTGTAACGGTTTTGGAGTGCTTGATGAAGGCTGGGAAGCTGGATGAT
GTGTGCCGGTTGATGGGAAGGATGGTTGGGGAGGGGATTGTCCCGGATACCATTTCTTGTAACTGTATAATTGAGTCATT
TTGTGAAGCT-GGGATGATTTCTGATGCAAACAGGCTGAGGATTCTGACTAAAGAGAAGGGTTTTGCAGCCGATGCTGCG
ACATATAGCATGCTGGTGCAGGGCTTTGGCAGGCAGGGAAGGGTGAAGGAAGGTGAGGCTGTGTTGGATGAAATGCTTGA
TTTAGGGTTTATACCAAACATTGTGGCTTACAATAGGCTTCTTGATAGCTTACATGTGCGGAGATCTTTGCAATGACAAG
TGAACTCCTGTAGGCATGTGTATGCTCCAAACATTTTTT-GGCCACATGGAAGCATCAAACTGCAAGACGTCACATAGTT
TGTGCTTGGAATTCATGTGCAGAGACTTT-GGAGGAACATAAAACAAAACAAGGGATAGTCGGATAGATGACAGTTGAGA
CGAGCGGTGGTCATAATTGCACTGACAGAAGCATCAAACTGCAATGACGAGTGAACTCCTCTAGGCATGTGTATGCTCCA
AACATTGGCCACATGGATGCATCAAACTGCAAGATGTCAGAGAGTTTCTGCTTGGAGTTCATGTGCACAGACTTTTGCAG
CGTACAGCAAAACATGGGGTACATGAGGCCATCGGTTTCATAATTTCATGCGAAGTTCCAAGGCTTGAAATGAGGTATTG
TTTTGACGACGCCCTTTAATCCCAAGATTAGTATTACTTGTGCTGTTGAATCACTTCT----TACTTTGTTAATATGTCA
TTAGTTGTTGTGTTGGCCTGCTGGTATCTGTGAACAGTTATGTGATTCACTGTTTTGTTTGTCCTCCTACATTATCTATA
TTTACTTT----GTCAAGGATGCAATCGGGCAACCCGCCCAGCCCGCATATA----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr3B_912
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------A------ATGCGTTTCTGCCCGTGGGCTAAAGCCCATCTCACT------
GACCCGGCCACACAC---------TCCTCCTGATTC-----CTTCCCCCT--T---------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------CCCTCCCGCGGCCGGCGATGGCCGCCTCCCGCCGCCTGGCGCGGAAGCTCCCCTCCATCATCTCCAA
GCACCAGCGCCTCATCTCGCCGGAGATCGAAACCCTGGAGGAGACCCCCGAAATCTCCACCTCGCCCGCCTCCATCCCCC
TCGACCCCTCCCTGCCGCTCCTCCCGCTCGCCGTCTCCCACCTCTCGCCGCCGAGCCCCCTCCCGTCGCTCCCCTCCGCG
CACGCCTCCTCCCCGGAGGCGCTCCTCCGCCTCCTGCGCCGCGCGCGGCACCACCCGCGGCTCGCGCCGCTCGACCTCCA
CCTCCTCCTCGCAGCCGCCGACGCCTCCTCGGCCTTCCGCCCCGACCACCGGCTCACGAGCCTCCTCGCCGCGCGCCTCG
CGGCCTCCCGCCGCCTCCCCTCGCTGCGGCGCCTCCTCCAGCTCGTCCTCTCCCGCCCCTGCCCCTGCGCCGACGACTCC
ATCTTCGCCTGCCCCGACCTCCTCCCGACCTTCCGCAAGGCCATCCTCGCCTTCGCCACCTCCGGCGACATCCCCGCGGC
GTCTGAGGCCCTCGCGTCCCTCCGCCGTGCCGCGGACTCGCCCCTCCCCGCCGAGTTCTACAACATCATCCTCCACGCCC
TGGCCCGTCTCCACCGCCACAACGACGCCATCCGCTTCTACGGCGAGATGACCAGCGTCCACCGCGTCGTCCCGGATGCC
TACACCTTCAACATACTCATCAACAGCTCCTGCCGTGTCGAAGGCGTCGATTCCGCCATGCGGTGGTTTGAGGAGATGCG
GCACCGGAGCTGTGCGCCGACTGGTGTGAGCTTCAATACTCTTATGCGCGGGTTCTTCAGAGAGGGCAGGTACAAGGAAG
GCCTTAAGGTTGCTCACGAGATGCTGCAGCTTGGGTCCGGGCTGTCGGTTGCTTCCATGCAGATTTTGATCGGTGGGCTG
TGCCGTGGAGGCGAGGCTTTGAAGGCAGCAGAGGTGTTTCAGGAGTTTTTGGTGGATGCAGTGGTGCCGGAAGGGTTTGA
TTGCTTGGATCTTGTTGAATCTCTGTGCCATGTTGGGAGGGTAGACAAAGCAGTGGAAGTGGTGGAGTTGGTATTGGAGA
GGAACATGGCATCCTGCTTGAGTGTCCCTGCTGGCGTAACGGTTCTGGATTGCTTGATGAAGGCGGGGAAGCTGGATGAT
GTGTGCCGGTTGATGGGAAGGATGGTTGGGGAGGGGATTGTACCAGATACCATTTCTTGTAACTTTATCTTCGAGGCACT
TTGTGAAGCT-GGGCGGACTTCTAATGCAAACAAGCTGAGGATTCTGGCTAAGGAGAAAGGTTTTCAGGCTGATGGTGTG
ACTTATAGCATGCTGGTGCAGGGGTTTGGTAGACAGGGAAGGGTGAAGGAAGGCGAGGCTGTGTTGGATGAAATGCTTGA
TTTAGGGTTTATACCTAACATTGTGGCTTACAATAGGCTTCTTGATAGCTTACACGTGCGGAGATCTTTGCAATAACAAG
TGAACTCCTGTAGACATGTGTATGCTCCAAACATCTTTT-GGCCACATGGAAGCATGAAACTGCAAGATGTCAGAGAGTT
GGTGCTTAGAATTCATGTGCAGAGTCTTTTCGAGGAACATAAAACAAAACAAGGGATAGTCGGATAGATGTCAGTTGAGA
CGAGCGGTGGTCATAATTGCACTGACAGAAGT------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGCGAAATTCCAGTGATTCAAATGAGGTATTG
TTTTGATTATGCCCTTTAGTTCGAACACTAGTCTTGATTTTGTTGTCTGCACACATTGTTGCTTCTTAGTTAAAGTACCA
TTAGTCATTATCTTGGACTCATGGTATCTGTAAACAGTTATGTGATTCACTGATTTGTTCGTTCTCCTATGGGGTCTATA
TTTACTTTGTTCGTCAAGGATGCAATCGGCCAACCCGCCAAGCCTGCATATAGCTATACCGTTTTTTGGAACGGATATAT
AACTATACTTAAAGTCAACTTAGTG-------------------------------------------------------
---------------------------------------------------------------------------
>chrUn_916
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CATTTCTGCCTGTGGGCTAAGCCCA-------T------
GACCCGGCCACGCAC---------TCCTCA-GATTC-----CCTCCCCCT--T---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CTCTTCCGCAGCCGGCGATGGCCGCCTCCCGCCGCCTGGCGCGGAAGCTCCCCTCCATCATCTCCAA
ACACCAGCGCCTCATCTCGCCGGAGATCGAAATCCTAGAGGAGACCCCCGAAATCTCCACCTCGCCCGCCTCCATCCCCC
TCGACCCCTCCCTGCCGCTCCTCCCGCTCGCCGTCTCCCACCTCTCGCCGCCGAGCCCCCTCCCGGCTCTCCCCGCCGCG
CACGCCTCCTCCCCCGCGGCGCTCCTCCGCCTCCTGCGCCGCGCGCGGCACCACCCGCGCCTCGCGCCGCTCGACCTCCA
CCTCCTCCTCGCGGCCGCCGACGCCTCCTCGGCCTTCCGCCCCGACCACCGCCTCACCGGCCTCCTCGCCGTGCGCCTCG
CGGCCTCCCGCCGCCTCCCCTCGCTGCGGCGCCTCCTCCAGCTCGTCCTCTCCCGGCCCTGCCCCTGCGCCGACGACTCC
ATCTTCGCCTGCCCCGACCTCCTCCCCACCTTCCGCAAGGCCATCCTCGCCTTCGCCTCCTCCGGCGACATCCCTGCGGC
GTCCGAAGCCCTCGCGTCCCTCCGCCGCGCCGCGGACTCGCCCCTCCCCGCCGAGTTTTACAACATCATCCTCCACGCCC
TGGCCCGTCTCCACCGCCACGACGACGCCATCCGCTTCTATGGCGAGATGACCAACGTCCACCGCCTCTCCCCTGATGCC
TACACCTTCAACATACTCATCAACAGCTCCTGCCGTGTCGAAGGCGTCGATGCCGCCATGCGGTGGTTCGAGGAGATGCA
GCGCCGGAGCTGTGCGCCGACTGGTGTGAGCTTCAATACTCTTATGCGCGGGTTCTTCAGAGAAGGAAGGTACAAGGAAG
GCCTTAAGGTTGCTCACGAGATGCTGCAGCTTGGAGCCGGGCTGTCGGTTGCTTCCATGGAGATTTTGATAGGTGGGTTG
TGCGGTGGAGGCGACGCTTTGAAGGCATCAGAGGTGTTTGCAGAGTTTTTGGTGGATGCGGTGGTGCCGGAAGGGTTTGA
TTGCTTGGATCTGGTTGAATCCCTATGCCATGTTGGAAGGGTGGACAAAGCAGTGGAAATAGTGGAGATGGTATTGGAGA
GGAACGGGGTATGCTGCTTAAGTGTCCCTGCTGGCATAACAGTTCTGGATTGCTTGATGAAGGCGGGGAAGCTGGATGAT
GTGTGCCGATTGATGGGAAGGATGGTTGGGGAGGGGATTGTACCAGATACCATATCTTGTAACTGTATCTTCGAGGCACT
TTGTGAAGCT-GG-CGGACTTCTGATGCAAACAAGCTGAGGATTCTGGCTAAGGAGGAGGGTTTTCAGGCTGATGGTGTG
ACTTATAGCATG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chrUn_1634
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GACGCCATCCGCTTCTACGGCGAGATGACCAACGTCCACCGCCTCTCCCCTGATGCC
TACACCTTCAACATACTCATCAACAGCTCCTGCCGTGTCGAAGGCGTCGATGCCGCCATGCGGTGGTTCGAGGAGATGCA
GCGCCGGAGCTGTGCGCCGACTGGTGTGAGCTTCAATACTCTTATGCGCGGGTTCTTCAGAGAAGGAAGGTACAAGGAAG
GCCTTAAGGTTGCTCACGAGATGCTGCAGCTTGGAGCCGGGCTGTCGGTTGCTTCCATGGAGATTTTGATAGGTGGGTTG
TGCGGTGGAGGCGACGCTTTGAAGGCATCAGAGGTGTTTGCAGAGTTTTTGGTGGATGCGGTGGTGCCGGAAGGGTTTGA
TTGCTTGGATCTGGTTGAATCCCTATGCCATGTTGGAAGGGTGGACAAAGCAGTGGAAATAGTGGAGATGGTATTGGAGA
GGAACGGGGTATGCTGCTTAAGTGTCCCTGCTGGCATAACAGTTCTGGATTGCTTGATGAAGGCGGGGAAGCTGGATGAT
GTGTGCCGATTGATGGGAAGGATGGTTGGGGAGGGGATTGTACCAGATACCATATCTTGTAACTGTATCTTCGAGGCACT
TTGTGAAGCT-GG-CGGACTTCTGATGCAAACAAGCTGAGGATTCTGGCTAAGGAGGAGGGTTTTCAGGCTGATGGTGTG
ACTTATAGCATGTTGGTGCAGGGGTTTGGTAGGCAAGGAAGGGTGAAGGAAGGCGAGGCTGTGTTGGATGAAATGCTTGA
TTTAGGGTTTATACCTAACATTGTGGCTTACAATAGGCTTCTTGATAGCTTGCACGTGCGGAGATCTTTGCAATAACAAG
TGAACTCCTCTAGGCATGTGTATGCTCCAAACGTTTTTT-GGCCACATGGAAGCATCAAACTGCAAGATGTCAGAGAGTT
GGTGCTTAGAATTCATGTGCACAGACTTTTGGAGGAACATAAAACAAAACAAGGGATAGTCGGATAGATGTCAGTTGAGA
CGAGCGGTGGTCACAATTGCACTGACAGAAGT------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGTGAAATTCCAGTGATTCAGATGAGGTATTG
TTTTGATTATGCCCTTTAGTTCGAACATTAATCTTGATTTTGTTGTCTGCACACATTGTTGCTTCTTAGTTAAATTACCA
TTAGTCATTGTCTTGGACTCGGGGTATCTGTAAACAGTTATGTGATTCACTGATTTGTTCGTCCTCCTACGGGATCTATA
TTTACTTTGTTCGTCAAGGATGCAATCGGCCAACCCGCCAAGCCTGCATATAGCTACACCGTTTTTTTGAACGGATATAT
AACTATACTTAAAGTCAACTTAGTG-------------------------------------------------------
---------------------------------------------------------------------------
>chr3B_1907
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-----------------TTGAGCGTCCCTGCCGGTGTAACGGTTCTGGACTGCTTGATGAAGGCGGGGAAGCTGGATGAT
GTGTGCCGGTTGATGGGAAGGATGGTTGGGGAGGGGATTGTACCAGATACCATATCTTGTAACTGTATCTTCGAGGCACT
TTGTGAAGCTGGG-CGGACTTCTGATGCAAACAAGCTGAGGATTCTGGCTAAGGAGAAGGGTTTTCAGGCTGATCGTGTG
ACTTATAGCATGCTGGTGCAGGGGTTTGGTAGGCAAGGGAGGGTGAAGGAAGGCGAGACTGTGTTGGATGAGATGCTTGA
TTTAGGGTTTATACCAAACATTGTGGCTTACAATAGGCTTCTTGATGGCTTACATGTGCGGAGATCTTTGGAATAACAAG
TGAACTCCTCTAGGCATGTGTATGCTCCAAACATTTTTTTGGCCACGTGGAAGCATCAAACTGCAAGAAGTCAGAGAGTT
GCTGCTTAGAATTCATGCGCACAGACTTTTGGAGGAACATAAAACAAAACAAGGGATAGTCGGATAGATGTCAGTTGAGA
TGAGCGGTGGTCACAATTGCACTGACAGAAGT------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGCGAAATTCCAGTGATTCAAATGAGGTATTG
TTTTGATTATGCTCTTTAGTTCGAACATTAGTATTGATTTTGTTGTCTGCACACATTTTTGCTTCTTAGTTAAAGTACCA
TTAGTCATTGTCTTGGACTCGTGGTATCTGTAAACAGTTATGTGATTCACTGATTTGTTCGTCCTCCTACGGGATCTATA
TTCACTTTGTTCGTCAAGGATGCAATCGGCCAACCCGCCAAGCCTGCATATAGCTATACCATTTTTTGGAACGGATATAT
AACTATACTTAAAGTCAACTTAGTG-------------------------------------------------------
---------------------------------------------------------------------------
>SNPs
SSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S
--S-S-------S-----S-SSS--S-------------------------------SS---------------------
-S-----------SSSSSSSSS--SS-SSSSSSSSSSSSSSSSS---S-------S--S----SS--S-S--S--S----
---S------S----------------S----------S----S---S--S------S--SS--------SSS-S-SSSS
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S----------------------------------S--
---------------S------S-S---------------S---------S-----------------------SSSSSS
-----S------------------S---------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------S--------
---------------------------------------------------------------S----------------
-----------------------------------------------------------S--------------------
-------------------------------------S----------------------------S-------------
S-------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S--------S-
-------------------------------------------------------S------------------------
--------------------------------------S--------S------------S-------------------
S--------------S----------------------------------------------------------------
-S---------------------S----------------S-------------SS------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------S---------------
----------------------------S-----------------------------------S---------------
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---------------------S----------------------------------------------------------
--S-S---------------------------------------------------------------------------
-----------------S-------S------------------------------------------------------
-------------------------------------------------S------------------S-----------
-----------------------------------------S-------S-------------------------
>forward_202
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----------------------GCGGATGCATTCGAACAGTC--------------------------------------
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>reverse_2296
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-------------------------------------------------------ATTGAGTGTCCCTGCTGGC------
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---------------------------------------------------------------------------
