>input_sequence_65751
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--------------------------------------------------------------------ATGGCGTTCCGA
CGCCCTTCATGTGTAATACTAGGAGCTCTTCTCGCCGTCTCCTTCCTCGCCGCCACGGCAGCCGCCGGTGACCACGGCCT
GACGGTCTTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCGGGGAGGCCTGCGACACCGGCATCTACAA------CACCG
TCATCATCTCCTTCTACAGCGTCTTCGGCCACGGCAAGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGC
GCCGACATCAAACACTGCCGGGGCAAGGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCC
GTCATCACAGTCCGCGGCCGACGTCGCCGACAACCTGTGGAACGCGCACCTCGGGGGCGGCCGCCGCGGCGTGTTCCGCC
CGTTTGGCGACGCCGTGGTCGACGGCATCGACTTCTTCATCGACCA------GGGCG---CGCCGGACCACTACGACGAG
CTGGCCAGGCGCCTGTCCGGATACAACCGGTACTACCGCGGCGCGCCCGGGGTGCGGCTGACGGCGACGGCGCGGTGCGT
TTACCCGGACTGGCACGTCCAGAGGGCGCTGGACACGGGGCTGTTCGAACGGATCCACGTCAGGTTCTACGGCGAGGACC
GGTGCTCGTACAACCACGTGTACAAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCCGGAGCAAG
GTGTACATCGGGCTGCCGGCGGCGAACGTGCCGGGGA------GGAACGACAAGGTCGGCCTGCCGTCGATGAACTACGA
CC--------TAATGCCCAGCGTGAAGCAGGCGGCAAACTACGGCGGGGTCATGCTCTGGGACAGGTACTACGACAAGCA
GACCGGATACGGCCGCGACCTCTACAACGGCGGCATCAACTAA-------------------------------------
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-----------------
>chr2B_1_TraesCS2B01G053200
CAGCCGGAGTAGCAAGCCCGGCTGGATACCACCACCGCTGCGAGGCACACGCAGCCGGATCAGCAAGCCCAGCTGGACAC
CACCACCACTGCGGGGCACACGCCGACATCCTCGCTGTCCACGAGGAACATCCGCCCGCGCCGGTAGCCGGCGCTGGCCA
CGAGCACGCTGCCACCTCACGAGAGGCAGACGACAAGGTGGGGTGGGGCTGATTGCTTTTCTCATTTTTGAGCGAGGGTG
TCTTTATGAAATTACACGGACTGTTTTGTAAATCTGTAAAAATCTCCCGTCTAACACCGTCAAATGTCAACAGTTACGCC
ACGTCAGCTCCACATGTCATCATCGTCATTAAACGGGTCAAAGTTGGCAAATACTGTTATTTGGCAAAAAATAGCCTCGG
AATTAGTGATTTTTGGCACAAAACTGTAGAATTATGGTTTTTGCAACCCTAAGCTTCAATGCTGATGTTTTCTGCAATTC
ACTCTATGTCAACACCAGGAGCAAGAAGAGAAAAAATTACGCCATATATTGGATGTGCAAAATTCTTGACAAATGCTAGT
TTAGGACTATATATACACAGTTCACATACATAATTTTGAGGGGTGCATGCTCATCGGCGAGGTTGATGATGAATCAATGG
GTCTGATTTGTGGTGAATCAATGCTCAATGGGTCTTCTTCATCCATGTGCGCGGCGCCCAGAGATAGCATCTGCCGTTTT
CTTTTCTAGGCTGGGCTTGTGGTCGATCGTCCATCTGATTTGACCCCATCCAGACCAGTTTGGCACCGCAGCCAATCGAA
ATTGTGTAGGCCGGCACACAAGAAATGACATGCACGCGCGTACGTACCT---------------TTCTTCCTTGCCTATT
ACC-----TACTGCACGCGCGCTCTAACTCTCT--ATATATAGACTTGGCCATGATCAGCATTCTTCACAACAACCAACA
---ATCACTGCAACTAACTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTAGA---AACGATGGCGTTCCGA
CGCCCTTCATGTGTAATACTAGGAGCTCTTCTCGCCGTCTCCTTCCTCGCCGCCACGGCAGCCGCCGGTGACCACGGCCT
GACGGTCTTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCGGGGAGGCCTGCGACACCGGCATCTACAA------CACCG
TCATCATCTCCTTCTACAGCGTCTTCGGCCACGGCAAGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGC
GCCGACATCAAACACTGCCGGGGCAAGGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCC
GTCATCACAGTCCGCGGCCGACGTCGCCGACAACCTGTGGAACGCGCACCTCGGGGGCGGCCGCCGCGGCGTGTTCCGCC
CGTTTGGCGACGCCGTGGTCGACGGCATCGACTTCTTCATCGACCA------GGGCG---CGCCGGACCACTACGACGAG
CTGGCCAGGCGCCTGTCCGGATACAACCGGTACTACCGCGGCGCGCCCGGGGTGCGGCTGACGGCGACGGCGCGGTGCGT
TTACCCGGACTGGCACGTCCAGAGGGCGCTGGACACGGGGCTGTTCGAACGGATCCACGTCAGGTTCTACGGCGAGGACC
GGTGCTCGTACAACCACGTGTACAAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCCGGAGCAAG
GTGTACATCGGGCTGCCGGCGGCGAACGTGCCGGGGA------GGAACGACAAGGTCGGCCTGCCGTCGATGAACTACGA
CC--------TAATGCCCAGCGTGAAGCAGGCGGCAAACTACGGCGGGGTCATGCTCTGGGACAGGTACTACGACAAGCA
GACCGGATACGGCCGCGACCTCTACAACGGCGGCATCAACTAATAATCAACGTGCAT----GCATGCATGCATTATAGTG
TGTGTGTGTCTGAA--AATAATAAATGAAACAC---TGATGTGACGGGTGGTATTATATTGTACTTCCAATAAATCAGAG
ATCCATATATGGACCGCTGGATGTTTCAACATGATATCATAATTTCTTTCCTCTCGTGTGTGTAACAACAGGCTCTGCCA
AAATGATTATTTGTCTATA-------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TTTCATATGTATGTATTATATTGTACGAATAAGTCATAGATCCATATATAGACCGCTGG
ATGTTACAACATTTTACACTAGTAAATGTTACACAAGTGCATAATGAAAGAGGATTAGTGACTCTCGGGTGCCACACACC
CCTATATGAATATCAGCCCCGTCGATGGAGGGGGCCAAGGTGGGCGACCGCCCAGGGCCGCCCAAAATTTGGGGTCCCAA
AATACCAGGTATTAG---------------------------------CCTAAGAAAAGCGTACAGAAAGCCCACTTAGC
AGGAAAGCCAGCTCACGAGTCCTCCTT---GTACATCGAT----CAGGCATGTTTTCATCAATGGATCGCTAACCCTAAA
CACAACACGCTGATCGGTTTG-CTT----CAATCGCCTAGGACGTCGTCGTCTG-CTGACGGCCTACCACCGATCGGCGA
TCGCAGATCGTTGAC----------TCCCCCTCCATGGCTGCCCCGATCCTCCACTACTAGTCTACTAGT-----AGGTA
TAAATGTCTCATCTGCTTAAGCCCATCCCTCTCTTTGATTACTA---GTAC----------TTGATTAAGCTTGATCTCC
CCGATTCTAAGTTAGGAGTAGATGAGCAGGTTAATATTATTTGTCCACGTGGTTAGA--------TATTGGTACTCCAGG
CTGGTAATAAGTTAGGTTGACACGGACCGAATTAGGATGAAATTGAGTTTGTCCATG-AATCTTCATCATGAATTTATTT
GTCAACAAAGCTAAGTTAGGAGTAGGATGGAATTAAATTTGTTCCTGATCAGTGTTAATAAAGTGAGAATATGTTTTAGT
TATATTAGTTCTTCTAT
>chr2D_665
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------------------------TCAATGGGTCTTCTCCATCCATGTGCGCGGCGCCCAGAGCTAGCATCTGCCGTTTT
CTTTTCTACGCTTGACTTGTGGTCGATCGTCCATCTGATTTGACCCCATCCAGACCAGTT-GCCGCCGCAGCCAATCGAA
ATTGTGCCGGCCGGCACACAAGAAATGACTTGCACGTGCGTACGTACCT---------------TTCTTCCTTGCCTATT
ACC-----TACTGCACGCGCGCTCTAACTCTCTCTCTATATAGACTTGGCCATGATCAGCATTCTTCACAGCAACCAACA
ATCATCACTGTAACTAACCAGAAGAAGCACAAGA------------------------AGA---AGCGATGGCGTTCCGA
CGCCGTTCATGCGTAGTAGCA---GCACTCCTCGCCCTCTCCTTCCTCGCCGCCACGGCAGCCGCCGGTGACCACGGCCT
GACGGTCTTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCGGGGAGGCCTGCGACACCGGCATCTACAA------CACCG
TCATCATCTCCTTCTACAGCGTCTTCGGCCACGGCAGGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGC
GCCGACATCAAGCACTGCCGGGGCAAGGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCC
GTCATCACAGTCCGCGGCCGACGTCGCCGACAACCTGTGGAACGCGCACCTCGGCGGCGGCCGCCGCGGCGTGTTCCGCC
CGTTCGGCGACGCCGTGGTCGACGGCATCGACTTCTTCATCGACCA------GGGCG---CGCCGGACCACTACGACGAG
CTGGCCAGGCGTCTGTCCGGCTACAACCGGTACTACCGCGGCGCGCCCGGGGTGCGGTTGACGGCGACGCCGCGGTGCGT
GTACCCGGACTGGCACGTCCAGAGGGCGCTGGACACGGGGCTGTTCGAGCGGATCCACGTCAGGTTCTACGGCGAAGACC
GGTGCTCCTACAACCACGTGCACAAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCCGGAGCAAG
GTGTACATCGGGCTGGCGGCGGCGAACGTGCCCGGGA------GGAACGACAAGGTCGGCCTCATGTCGATGAACTACGA
CC--------TCATGCCCAGCGTGAAGCAGGCGGCGAACTACGGCGGGGTCATGCTCTGGGAGAGGTACTACGACAAGCA
GACCGGATACGGCCGCGACCTCTACAACGGCGGCATCAACTAATAATCAACACGCAC----GCATGCATGCATTATAGTG
TGTGTCTGACAATA--ATAAATAAATTAAACAC---TGATGTGACGTGTGGTATTGTATTGTACG---AATAAATCAGAG
ATCCATATATGGACCGCTCGATGTTTCAACAT------------------------------------------------
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-----------------
>chr2A_665
--------------------------------------------------------------------------------
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------------------------TCAATGGGTCTTCTCCATCCATGTGCGCGGCGCCCAGAGCTAGCATCTGCCGTTTA
ATTTTCTGCGCTTGACTTGTGATCGATCGTCCATCTGATTTGACCCCATCCAGACCAGTT-GGCGACGCAGCCAATCGAA
ATTGTGTAGGCCGGCACACAAGAAATGACTTGCACGCGCGTACGTACCT----------TGCCTTTCTTCCTTGCC----
------------------------TAGCGCTCTCTATATATAGACTTGGGCATGATCAGCATTCTTCACAGCAACCAAGA
ATCATCACTGTAACTAACCAGAAGAAGAAGAAGC------------------AGAAGTAGA---AGCGATGGCATTCCGA
CGCCCTTCGTGCGTAGTAGCAGGGGCTCTTCTCGCCGTCTCCTTCCTCGCCGCCACAGCAACCGCCGGTGACCACGGCCT
GACGGTCTTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCAGGGAGGCCTGCGACACCGGCATCTACAA------CACCG
TCATCATCTCCTTTTACAGCGTCTTCGGCCACGGCAGGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGC
GCCGACATCAAGCACTGCCGGGGCAAGGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCGCTGCC
GTCCTCGCAGTCCGCGGCCGACGTCGCCGACAACCTGTGGAACGCGCACCTCGGTGGCGGCCGACCTGGCGTGTTCCGCC
CGTTCGGCGACGCCGTGGTCGACGGCATCGACTTCTTCATCGACCA------GGGCG---CGCCGGACCACTACGACGAG
CTGGCCAGGCGTCTGTCCGGCTACAACCGGTACTACCGCGGCGCGCCCGGGGTGCGGCTGACGGCGACGCCGCGGTGCGT
GTACCCGGACTGGCACGTCCAGAGGGCGCTGGACACGGGGCTGTTCGAGCGGATCCACGTCAGGTTCTACGGCGACGACC
GGTGCTCCTACAACCACGTGCACAAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCGGGAGCAAG
GTGTACATCGGGCTGGCGGCGGCGAACTTGCCGGGGA------GGAACGACAAGGTCGGCCTTGGGTCCATGCAATATGA
CC--------TCATGCCGAGCGTGAAGCAGGCGGCAAACTACGGCGGGGTCATGCTCTGGGACAGGTACTACGACAAGCA
GACCGGATACGGCCGCGAACTCTACAACGGCGGCATCAACTAATAATCTA----CAC----GCATGCATGCATTATAGTG
TGTGTGTGTGTGTAGCAATAATAATTTAAACACACCTGATGGGATTAGTGGTATTGTATTGTACG---AATAAATCAGAG
ATCCATATAGGGACCGCTGGATGTTTCAACAT------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>chr2A_665
--------------------------------------------------------------------------------
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------------------------TCAATGGGTCTTCTCCAT----GTGCGCGGCGCCTAGACATGGAATCTGCCGTTTT
C-TTTCTACGCTTGACTTGTGGTCGATCGTCCATCTGATTTGACCCCATCCAGACCAGTT-GGCGCCGCAGCCGATCGAA
ATTGC----GCCGGCACACAAGAAATGACTTGCACGCGCGTACGTACCTTGTGAACAAATGCCTTCCTTCCTTGCCTATT
ACCCTACCTACTGCACGCGCGCCCTAGCTCTCTCTATATATAGACTTGGCCATGATCA----------------------
----TCACTGTAACTAACTGCAAGAAGAAGAAGA------------------AGAAGAAGCAGTAACGATGGCGTTCCGA
CGCCCTTCATGTGTACTACTAGGAGTACTTCTCGCCGTCTCCTTCCTCGCCGCCACGGCAGCCGCCGGTGACCACGGCCT
GACGGTCTTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCGGGGAGGCCTGCGACACCGGCATCTACAA------CACCG
TCATCATCTCCTTCTACAGCGTCTTCGGCCACGGCAGGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGC
GCCGACATCAAGCACTGCCGGGGCAAGGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCC
CACCTCACAGTCCGCGGCCGACGTCGCCGACAACCTGTGGAACGCGCACCTCGGCGGCGGCCGACCCGGCGTGTTCCGCC
CGTTCGGCGACGCGGTGGTCGACGGCATCGACTTCTTCATCGACCA------GGGCG---CGCCGGACCACTACGACGAG
CTGGCCAGGCGTCTCTCGGGATACAACAAGTACTACCGCGGGGCGCCCGGGGTGCGGCTGACGGCGACGCCGCGGTGCGT
GTACCCGGACTGGCACGTCCAGAGGGCGCTGGACACGGGGCTGTTCGAGCGGATCCACGTCAGGTTCTACGGCGACGACC
GGTGCTCCTACAACCACGTGCACAAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCCGGAGCAAG
CTGTACATCGGGCTGCCGGCGGCGAACGTGCCCGGGA------GGAGCGAAAAGGTCGGCCTTGGGTCCATGCAATATGA
CC--------TGATGCCCAGCGTGAAGCAGGCGGCAAATTACGGCGGGGTCATGCTCTGGGACAGGTACTACGACCAGCA
GACCGGATATGGCCGCGAACTCTACAACGGCGGCATCAACTAATAATCTA----CACGCATGCATGCATGCATTATAGTG
TGTGTG--------------------------------------------------------------------------
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-----------------
>chr5B_1091
CTC-----------------------------------------------------------------------------
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-ACCGTCTTCTGGGGCCGGAACAAGGACGAGGGCTCTCTCAGGGAAGCCTGCGACACCGGCCT------CTACACCGCGG
TCATCATGTCCTTCCTCAACGTCTACGGCCACGGCAAGTACCGCCTCGACCTCTCCGGCCACCCGCTCGCCGGCATCGGG
GACGACATCAGGCACTGCCAGTCCATGGGCATCACCGTTTCCCTCTCGATCGGCGGCTTCGGCGGCGACTACGCGCTCCC
GACCAACCGATCCGCGCTCGACCTCGCCGACCACCTCTGGTTCTCCTACCTCGGCGGCAGACGCAGGGGCGTGCGCCGCC
CGTTCGGCCGCACGCGGCTCGACGGCGTCGACCTCTTCCTGGAGCG------CGGCCGGCCGGCGGAGCACTACGACGCG
CTGGCCAGGGAGCTGGCCAGGCGCAAGGC------CCGCGGGGGGAAGGCGCCGCGGCTGACGGCGACCCCACGCTACGC
GTTCCCGGACCGGCTCGCGGCGCCGGCGCTCTCGACGGGGGTCTTCGAGCGCATCCACGTCAGGTTCTACG---------
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-----------------
>chr1A_1097
GTG-----------------------------------------------------------------------------
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-------TTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCCGGGAGACCTGCGACACCGGAAGGTACACCTACACCACCG
TCATCGTCTCCTTCCTCGACGTCTTCGGCCACGGCAGGTACCACCTCGACCTCTCCGGCCACGACGTCTCCGCCGTGGGC
GCCGACATCAAGCAGTGTCAGTCCAACGGCATGTCCATATTCCTCTCCATCGGGGGCTTCGGCGGCCAGTACTCCCTGCC
GAGGCGCAGGTCCGCGGCGGACGTGGCCGACTACCTCTGGAACGCCTACATGCTCGGCACGCGCGCGGGCGTCCACCGCC
CGTTCGGCGACGCCTACGTCGACGGCATCAACTTCTTCATCGACGGTGCCGCCGGCGCGCGGCCCGAAAACTACGACGAG
CTGGCCAGGCGGCTATGGGACTACAACAAGGGCTACCGTGCCAGGACGCCGGTGCAGCTGTCGGCGACGCCGCGGTGCGG
GTACTCGGACAGGCGCGTGGAGCGGGCGCTCGCCACGGGGCTCTTCAACCGGATCTTCGTCAGGTTCTACGACGA-----
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-----------------
>chr1B_1100
--------------------------------------------------------------------------------
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-------TTCTGGGGCCGGAACAAGGACGAGGGCTCCCTCCGGGAGACCTGCGACACCGGAAGGTACACGTTCACCACTG
TAATCATCTCCTTCCTCGACGTCTTCGGCAACGGCAGGTACCACCTCGACCTCTCCGGCCACGACGTCTCCGCCGTCGGC
GCCGACATCAAGCACTGCCAGTCCACGGGCAAGCTCATCTTCCTCTCCATCGGGGGCTTCGGCGGCCAGTACTCCCTACC
GACCCGCAGGTCGGCGGCGGACGTGGCCGACTACCTCTGGAACGCCTACATGCTCGGAACCCGCAAGGGCGTCAGCCGCC
CGTTCGGCGACGCCTACGTCGACGGCATCAACTTCTTCATCGACGGTGCCGCCGGCGCGCGGCCGGAAAACTACGACGAG
CTGGCCAGGCGGCTCTGGGACTACAACAAGGCGTACCGCGGCAGAACGCCGGTGCAGCTGTCCGCAACGCCGCGGTGCGG
GTACCCGGACAGGCGCGTGGAGCGGGCGCTCGCCACGGGGCTGTTCAACCGCATCTTCGTCAGGTTCTACG---------
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-----------------
>chr2B_1167
TCA-----------------------------------------------------------------------------
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----CATCTCCTTCTACAGCGTCTTCGGCCACGGCAAGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGC
ACCGACATCAAGCACTGCCGGGGCAAGGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCC
GTCATCACAGTCCGCGGCCGATGTCGCCGACAACCTGTGGAACGCGCACCTTGGGGGCGGCCGCCGCGGCGTGTTCCGCC
CGTTCGGCGACACCGTGG-CGAAGGCATCGACTTCTTCATCGACCA------GGGCG---CGCCGGACCACTACGAGGAG
CTCGCCAGGCGTCTGTCCGGATACAACCGGTACTACCGCGGCGCG-CCGGGGTGAGGCTGACGGCGACGCCGCGGTGCGT
GTACCCGGACTGGTACGTCCAGAGGGCGCTGGACACGGGGCTGTTCGAGCGGATCCACGTCAGGTTCTACGGCGAAGACC
GGTGCTCGTACAGCCACGTGCACAAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCCGGAGCAAG
GTGTACATCGGGCTGCCGGCGGCGAACGTGCCCGGGACTGGGAGGAACGACGAGGTCGGCCTCATGTCGATGAACTACGA
CCTGATGCGGTGATGCCCAGCGTGAAGCAGGCGGCAAACTACGGCGGGGTCATGCTGTGGGACAGGTACTACGACAAGCA
GACCGGATACGGCCGCGACCTCTACAACGCCGGCATCAACTACTAATAATCAACGT-GCATGCATGCATGCATTATAGTG
TGTGTGTGTCTGAA--AATAATAAATTAAACAC---TGATGTGACGGGTGGTATTATATTGTACTTCCAATAAATCAGAG
ATCCATATATGGAC-----GATGTTTCAACATGATATCATAATTTCTTTCCTCTCGTGTATGTAACAACAGGCTCTGCCA
AAATGATTATTTGTCTACTCCCTCCGTCCTAAATATAAGTCCTTTTTAAAATTTCAAATGGACTACCACATACGCGTATA
CATAGACATATTTTAGAGTGTAGATTTACTCATTTAACTTCATACGTAGTCGGTTGTTGAAATCTCTAAAAAAACCTATA
TTTAGGAACGGGGGAAGTATGTTTCATATGTATGTATTATATTGTACGAATAAGTCATAGATCCATATATAGACCGCTGG
ATGTTTCAACATTTTACACTAGTATATGTTACACAAGTGCATAATGGAAGAGGATTAGTGACTCTCGGGGGTCACGCACC
CCTATATGAATAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>chr2A_2266
--------------------------------------------------------------------------------
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-------------CAGCCCCGTCGATGGAGGGGGCCAAGGTGGGCAACCGCACAGGGCCCCCCAAAAATTGGGGCCCCAA
ATTACCAGGTATTAGGTTTAGATGATTTATTTAATCCACCAGCAAAGTCCTAGGAGAAGCGTACAAAGAGCCTACTTAGT
AGCAAAGCCAGCCCACGAGTCCTCCTT---GTACATCTATCGACCAGGCATGTTTTCATC-GTCGATCGCTAACCCAAAA
CACAACACGCTGATCGGTTTT-CTTCCGCCAATCGCCCATGACGCCGTCGTCTG-CTGACTGCCTACCACCGATTGGTGA
TCTTAGATCGTCGGC----------TCACCCTCCATGGCTGCCCCCAGTCCTCCA-------CTACTAGT-----AGGTA
TAAATGTCTCATCTGCTTAAGCCCATCCCTTTCTTTGGTTACTAG--GTAC----------TTGATTAAGCTTGATCTTC
CTGATGCTAAGTTAGGAGTAGATGAGTAGGTTAATATTATTTGTCCATGTGGCTAGA--------TATTGCTACTCCAGG
CTGGCACTAAGTTAGGTTGACAAGGACCGAATTAGGATGAAATTGAGTTTGTCCATGGAATCTTCGTCATGAATTTATTT
TTCAACAAAGCCAAGTTAGGAGTAGTATGGAATTAAGTTTGTTCCTAATCAGTGGTGATAAAGTGAGAATATGTTTTAGT
TATATTAGTTCTTCTAT
>chr2D_2347
GCCTAAT-------------------------------------------------------------------------
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-------------------------------------------------------AAAGCGTACAGAGAGCCCACTCAGC
AGCAAAGCCAGCCCATGGG---TCCTCCTTGTACATCTATCGATCGGCCATGTTTCCATC-ATCGATCGCTAACCCTAAA
CACAACAGACCCATCGGTTCG-CTTCTGCCAATCGCCCAGGACGCCGTCATGTG-CTGGCTGCCTTCCGCCGATCGGTAA
TCGCGGATCGTCGAC----------GCCCCCTCCATGGCTGCCCCCAGTCCTCCA-------CACCTAGTGTACTAGCCA
TCACTGTCTCGTCTGCTTAATCCCATCCCTCTCTTTGATTACTA---GTAC----------CTGATTAAGCTTGATATTC
CCGATGCTAAGTTAGGAA--------TAGGTCAATATTATTTGTTCACGGAGCTAG----------ATAGGTACTCCAGG
CTGGCGCCAAGTTAGGTTGACACGGTCGGAATTAGGATGAAATTGAGTTTGTCCATGGAATCCTCGTCATGAATTTATTT
CTCCACAAAGCTAGGTTAGGAGTAGTATGGAATTAAGTTTGTTTCTGATCATTGGTAGTAACGTGAGAGTATGTTTTAGT
TATATTAGTTCTTCT--
>chr7D_2347
--------------------------------------------------------------------------------
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--------------G---------------------------------CCTAGGAAAAGCGTATAGAGAGCCCACGCAGC
AGCAAAGCCAGCCCACGGG---TCCTT---GTACATCTATCGACCAGGCATGTTTCCGTC-ATCGATCGCTAACCCTAAA
CACAACACGCCGATCGGCTTTGCTTCCGCCAATCGCCGAGGACGCCGTCGTCTG-CTGACTGCCTTCCACCGATCGGCCA
GGACGCCGTCGTCTGCTG----CCTTCCCCCTCCATGGTTGCCCCCAGTCCTCCA-------GTACTAGTCTACTAGGTA
TAAATGTCTCATCTGCTTAAGCCCATCCCTCTCTTTGATTACTA---ATAC----------TTGATTAAGCTTGATCTCC
CCGATGCTAAGTTAGGAGTAGATGAGTAGGTTAATATTATTTGTCCACGGCGCTAGGT--------ATTGGTACTCCAGG
CTGGCACTAAATTAGGTTGACAGGGACCGAATTAGGATGAAATTGAGATTGTCCATGGAATCTTTGTCATGAATTTATTT
GTCAACAAAGCCAAGTTAGGAGTAGTGTGGAATTAACTTTGTTCCTGATCAGTGGTAATAAAGTGAGAATTTGTTTTAGT
TATATTAGTTCTTCTAT
>chr7D_2347
--------------------------------------------------------------------------------
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--------------G---------------------------------CCTAGGAAAAGCGTATAGAGAGCCCACGCAGC
AGCAAAGCCAGCCCACGGG---TCCTC---GTACATCTATCGACCAGGCATGTTTTCGTC-ATCGATCGCTAACCCTAAA
CACAACACACCGATCGGCTTTGCTTCCGCCAACCGCCGAGGACGCCGTCGTCTG-CTGACTGCCTTCCACCGATCGGCCA
GGACGCCGTCGTCTGCTG----CCTTCCCCCTCCATGGCTGCCCCTAGTTCTCCA-------GTACTAGTCTGCTAGGTA
TAAATGTCTCATCTGCTTAAGCCCATCCCTCTCTTTGATTACTA---ATAC----------TTGATTAAGCATGATCTCC
CCGATGCTAAGTTAGGAGTAGATGAGTAGGTTAATATTATTTGTCCACGGCGCTAGGTATTGCCGTATTGGTACTCCAGG
CTGGCACTAAATTAGGTTGACAGGGACCGAATTAGGATGAAATTGAGATTGTCCATGGAATCTTTGTCATGAATTTATTT
GTCAACAAAGCCAAGTTAGGAGTAGTATGGAATTAACTTTGTTCCTGATCAGTGGTAATAAAGTGAGAATTTGTTTTAGT
TATATTAGTTCTTCTAT
>chr7B_2347
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--------------G---------------------------------CCTAGGAAAAGCGTGTAGAGAGCCCACGCAGC
AGCAAAGCCAGCCCACGGG---TCCTC---GTATATCTATCGACCAGGCACGTTTCCGTC-ATCGATCGCTAACCCTACA
CACAACACGCCGATCGGCTTTGCTTCCGCCAATCGCCGAGGACGCCGTCGTCTG-CTGACTGCCTTTCACCGATCGGCCA
GGACGTCGTCGTCTGCT----GCCTTCCCCCTCCATGGCTGCCCCCAGTTCTCCA-------GTACTAGTCTACTAGGTA
TAAATGTCTCATCTGCTTAAGCCCATCCATCTCTTTGATTACAA---ATAC----------TTGATTAAGCTTGATCTCC
CCGATGCTAAGTTAGGAGTAGATGAGTAGGTTAATATTATTTGTCCACGGCGCTAGGTA--------TTGGTACTCCAGG
CTGGCACTAAATTAGGTTGACAGGGACTGAATTAGGATGAAATTGAGATTGTCCATGGAATCTTTGTCATGAATTTATTT
GTCAACAAAGCCAAGTTAGGAGTAGTATGTAATTAACTTTGTTCCTGATCAGTGGTAATAAAGTGAGAATTTGTTTTAGT
TATATTAGTTCTTCTAT
>chr1D_2347
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--------------G---------------------------------CCTAGGAAAAGCGTATAGAGAGCCCACGCAGC
AGCAAAGCCAGCCCACAGG---TCCTC---GTACATCTATCGACCT-----------GTC-ATCGATCGCTAACCCTAAA
CACAACACGCCGATCGGCTTTGCTTCCGCCAATCGCCGAGGACGCCGTCGTCTG-CTGACTGCCTTCCACCGATCGGCCA
GGACGCCGTCGTCTGCTGACTGCCTTCCCCCTCCATGGCTGCCCCCAGTCCTCCA-------GTACTAGTCTACTAGGTA
TAAATGTCTCATCTGCTTAAGCCCATCCCTCTCTTTGATTACTA---ATAC----------TTGATTAAGCTTGACCTCC
CCGATGCTAAGTTAGGAGTAGATGAGTAGGTTAATATTATTTGTCCACGGCGCTAGGTA--------TTGGTACTCCAGG
CTGGCACTAAATTAGGTTGACAGGGACCGAATTAGGATGAAATTGAGATTGTCCATGGAATCTTTGTCATGAATTTATTT
GTCAACAAAGCCAAGTTAGGAGTAGTATGGAATTAACTTTGTTCCTGATCAGTGGTAATAAAGTGAGAATTTGTTTTAGT
TATATTAGTTCTTCTAT
>chr6D_2347
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--------------G---------------------------------CCTAGGAAAAACGTATAGAGAGCCCACTCAGC
AGCAAAGCCAGCCCACGGG---TCCTT---GTACATCTATCGACCAGGCATGTTTCCGTC-ATCGATCGCTAACCCTAAA
CACAACACGCCGATCGGC-TTGCTTCCGCCAATCGCCTAGGATGCCGTCGTCTG-CTGACTGCCTTCCACCGATCGGCCA
GGACGCCGTCGTCTG----CTGCCTTCCCCCTCCATGGCTGCCCCGAGTCCTCTA-------GTACTAGTCTACTAGGTA
TAAATGTCTCATCTGCTTAAGCCCATCCCTCTCTTTGATTACTA---ATAC----------TTGAT----------CTCC
TCGATGCTAAGTTAGGAGTAGATGAGTAGGTTAATATTATTTGTCCACGGCACTAGGTA--------TTGGTACTCCAGG
CTGGCACTAAATTAGGTTGATAGAGACCGAATTAGGATGAAATTGAGATTGTCCATGGAATCTTTGTCATGAGTTTATTT
GTCAACAAAGCCAAGTTAGGAGTAGTATGGAATTAAGTTTGTTCCTGATCAGTGGTAATAAAATGAGAATTTGTTTTAGT
TATATTAGTTCTTCTAT
>chr1A_2347
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--------------G---------------------------------CCTAGGAAAAGCGTATAGAGAGTCCACTCAGC
AGCAAAGTCAGTCAACGGG---TCCTC---ATACATCTATCGACCAGGCATGTTTGCGTC-ATCAATCGCTAACCCTAAA
CACAACACACCGATCAGC-TTGCTTCCGCCAATCGCCCAGGACGCCGTCGTCTG-TTGACTGCCTTCCACGGATCGGCCA
GGACGCCGTCGTCT----ACTGCCTTCCCCCTCCATGGCTGCCCCCAGTCCTTCA-------GTACTAGTCTACTAGGTA
TGCATGTCTCATCTGCTTAAGCCCATCCCTCTCTTTGAT-------------------------------------CTCC
ATGATGCTAAGTTAGGAGTAGATGAGTAGGTTAATATTATTTGTCCACGGGGCTAGGTA--------TTGGTACTCCAGA
CTGGCACTAAATTAGGTTGACAGAGACCCAATTAGGATGAAATTGAAATTGTCCATGGAATTTTTGTCATGAATTTATTT
GTCAATAAAGCCAAGTTAGCAATAGTATGGAATTATATTTGTTCGTGATTAGTGGTAATAAAGTGAGAATTTGTTTTAGT
TATATTAGTTCTTCTAT
>chr1B_2349
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-------------------------------------------------CTAGGAAAAGCGTATAGAGAGCCCACTCAGC
AGCAAAGCCAGCCCACGGG---TCCTC---GTACATCTATCGACCAGGCATGTTTCAGTC-AACGATCGCTAACCCTAAA
CACAACACGCCGATCGGC-TTGCTTCTGCCAATCGCCCATGATGTCATCGTCTG-CTGACTGCCTTCCACCGATCGGCCA
GGATGCCGTCGTCTGCTG----TCTT---CCCCCATGGCTGCCCCCAGTCCTCCA-------CTACTAGTGTACTCGGTA
TAAATGTTTCATCTGCTTAAGCCCATCCATCTCTTTGATTACTACTAGTAC----------TTGATTAAGCTTGATCTCC
CCAATGCTAAGTTAGGAGTAGATGAGTAGGTTAATATTATTTGTCCACAGGGCTAGGTA--------TTGGTATTCCAGG
CTGGCACTAAATTAGGTTGACAGGGACTGAATTAGGATGAAATTGAGATTGTCCATGGAATCTTGGTCATGAATTTATTT
GTCAACAAAGCCAAGTTAGGAGGAGTATGGAATTAAGTTTGTTCCTGATCAGTGGTAATAAAGTGAGAATCTGTTTTAGT
TATATTAGTTCTTCTAT
>chr3A_2368
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--------------------------------------------------------------------AGCCCACTCAGA
AGCAAAGCCAGCCCATGAGGCCTCCTT---GTACATGTATCGATCAGGCATGTT-CCGTC-ATCGGTCGCTAAACCTAAA
CACAACATGCCAC-CGGT-TCGCTTCTGCCAGTCGCCCAGGACGGCGTGGTCTGACTGGCTGCCTTTCGCCGACCGGCGA
TCCCAGAACCTCGAAGCCA----------------------CCTCCAATCCTCCA-------CTACTAGTGTACTAAGTA
TCACTGTCTCGTCTACTTAATTTCGTCTCTGTCTTCTATTACTA---GTATTTGATTAAGTTTGAT----------CTCC
CCGATGCTAAGTTAGGAGTAGCAGAGTAGGTCAATATTATTTGTCCATAGGGCTAGATA--------TTGGTATTCC-GG
CTGGCGCTAAGTTAGGTTGGCAGGGACGGAATTAGGACCAGATTGAGTTTGTCCACGGAATCTTTGTCATGAATTTATTT
GTCAATGAAGATAGGTTAGGAATAGTAAGAAATTAAAATTATTCCCGCTCGGGGGTAATAAAATGAGAGTACATTTTATT
TATA-------------
>SNPs
-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS--------------S-----------------------------------------
--------S---S-S---------------------------------------------S---S---------------
-----------------------------S--------------------------------------------------
----------------------------------------------------------------------S---------
----------S-----------------------SSSSSSSSSSSSSSSSSS----------------------------
---------------S----------------------------------------------------------------
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-----------S--------------------------------------------------------------------
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----S---------------------------------------------------------------------------
-----------S---------------------------------------------------------S----------
S-----------------------------------------------S--------------------------S----
--------------------S-----------------------------------------------------------
--------------------------------------------------------------SSS---------------
-----------S--------------------------------------------------------------------
---------------------------------------------------SS---S-----------------------
--------------------------S-----------------------------------------------------
-----------------------------------------------------------S--------------------
-----------------SS-------------------------------------------------------------
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-----S------------------S---------------------S----------------------S-S---S----
---------------------------------------------S-----S-------S-------S------S-----
-S--------------------------------------------------S--------------S------------
--S---------S------------------------S----------------------S--S----------------
------------------------------------------------------------S-------------------
-----------------------------------------------SS-SS-SSSSSSSSS------------------
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-----S--------------------S-------------------------S---------------------------
----S-S----------------------------------------------------------S--------------
-------------------------S----------------------------S-------------------------
-----------------
>forward_614
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----------------------------------TTTGAGGGGTGCATGCTCAT--------------------------
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>reverse_1701
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--------------------TACAAAGACGGGGTGATGGC----------------------------------------
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>forward_629
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-------------------------------------------------CTCATCGGCGAGGTTGATGA-----------
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>reverse_2140
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-----------------------------------------------------------GTGTAACAACAGGCTCTGCC-
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