>input_sequence_65745
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------------------------------------------------------------------------------AT
GCCGCCTCATAAGATAGAGACTGGCCACCAAGATGTGGTGCATGACATCGCAATGGATTACTACGGGAAGCGTATTGCCA
CTGCCTCCTCTGATAACACAATCAAGATCATTGGCGTAAGTGGCACCTCGCACCAGCAACTTGCTACTTTGAGCGGACAC
GAG------------CAAATCGCATGGGCTCATCCCAAGTATGGTTCCATGCTTGCATCCTGCAGCTATGATGGTCGGGT
CATCATATGGAAAGAAGGGAGTAAGCCCGATGAGTGGGCACAGGCACACACTTTCAATGAGCACAAGTCTTCTGTCAATT
CCATTGCTTGGGCGCCTCACGAGCTCGGCCTCTGCTTGGCTTGCGGTTCGTCTGATGGGAACATTTCCGTGTTCATGGCT
CGTTCTGATGGAGGGTGGGAGACGACGCGCATCGATCAGGCACATCCAGTGGGCGTCACCTCTGTTTCCTGGGCCCCATC
AATGGCGCCGGGCGCTCTAATCAGTCCAGGGCCTTCTGGGCAGTTCGAGTACGTCCAGAAACTTGCTTCTGGTGGCTGCG
ACAACACGGTCAAGGTGTGGAAGCTCACCAACGGGAGTTGGAGGATGGACTGCTTTCCTGCCCTTCAGATGCACAGGGAC
TGGGTGAGGGACGTCGCCTGGGCGCCGAACCTAGGCCTCCCTAAGTCCACGATCGCCAGCGCCTCTCAGGATGGAACCGT
CGTCATCTGGACCGCGCCAAAAGAAGGCGAGCAGTGGGAAGGCAGGGTCCTGAATGATTTCAGAACCCCTGTTTGGAGGC
TGTCGTGGTCGCTGACGGGCAACATCTTGGCGGTCTCCGATGGCAACAACAATGTGACCCTCTGGAAAGAAGCCGTCGAC
GGCGAATGGCAGCAAGTGACTACCGTCGAGCCATAG--------------------------------------------
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---------------------
>chr1D_1_TraesCS1D01G044700
GATCAGTTGTTTGACGGTTGCAAATGTTATATTTATACTTAATACACCATTTGAATGCATCTCCAAATAGTGCATGATAC
TTTCTAAGAAGTTGTGATGTTG--------ATGATACTGTCCTCTGAATTCTTAATTACTGTGAAGTGTCGATTTCTGTG
AAGCAAAAGATGTTGTAGTTCTCGTGACATGGCCTTATTGCTGTCTTGTCCTTCATTATAAGATGTTCAAAGTGAACAAT
ATTTAGTTCTATTATTGTCAACTAGCTAGACACTGTTTTGTTGCCAATCACAATTTCCCTGGGCATGTGATTAAATAAAA
CCATCTCATGTCATGCCATGCATTAT-ACTATGGGAGAAGAGAAACAAGTTAATCACTTGAAAGACATTTTTATCTTCTG
GGGATGTCTAAGTTTCTTCCTTGAATTTCCCAGTAGTATCTTTGTATATTGTTG-CTAGAATTCCTTGTTTATTAGGCTA
ATTTTG-TCACAGGATTTCTAAATATTAGTCAGACAGGTTTATACTTTTTTTCCAGAAAATGCAGAAGATTTGCGTTTCA
TTGCATTGAAAAGGAAGGGGTTTTCAGTTACATCATCCTAGGAGGCAATCATACAGTATGAGGGTGTTGCAGTTAGTGTA
CATCCCAGGTTTATACTTGCGATCACCATAATTATAACAAGCAGTCAGATTTCATTTTGTTATTTTACAGAAAAAAAAAG
TATTGACATGCTGGTAGCAAGGCAGTGTATGTATCTTGTGTACCAAAATTGTTATGAATTATAATTGTAATATCATAATT
TTTATAACTTTTAACTGTAACA--------ACTCAGCTCCTTATGTTGTGAAATGCAACTGTGTTACCTGTATCAGTGAA
TTGTATACTGC---ATTTTTTT--CTTTATTCTTTAACTCGATGTCCTCTAAATGTTAGTTTTCTATTACTGGCAGATAG
GAGCCTGAGGTGGTCAGGACAG-----------AACAGTTGGTTACTACTTTAAAGCTGACACATAC---TTGGAACAAT
GCCGCCTCATAAGATAGAGACTGGCCACCAAGATGTGGTGCATGACATCGCAATGGATTACTACGGGAAGCGTATTGCCA
CTGCCTCCTCTGATAACACAATCAAGATCATTGGCGTAAGTGGCACCTCGCACCAGCAACTTGCTACTTTGAGCGGACAC
GAG------------CAAATCGCATGGGCTCATCCCAAGTATGGTTCCATGCTTGCATCCTGCAGCTATGATGGTCGGGT
CATCATATGGAAAGAAGGGAGTAAGCCCGATGAGTGGGCACAGGCACACACTTTCAATGAGCACAAGTCTTCTGTCAATT
CCATTGCTTGGGCGCCTCACGAGCTCGGCCTCTGCTTGGCTTGCGGTTCGTCTGATGGGAACATTTCCGTGTTCATGGCT
CGTTCTGATGGAGGGTGGGAGACGACGCGCATCGATCAGGCACATCCAGTGGGCGTCACCTCTGTTTCCTGGGCCCCATC
AATGGCGCCGGGCGCTCTAATCAGTCCAGGGCCTTCTGGGCAGTTCGAGTACGTCCAGAAACTTGCTTCTGGTGGCTGCG
ACAACACGGTCAAGGTGTGGAAGCTCACCAACGGGAGTTGGAGGATGGACTGCTTTCCTGCCCTTCAGATGCACAGGGAC
TGGGTGAGGGACGTCGCCTGGGCGCCGAACCTAGGCCTCCCTAAGTCCACGATCGCCAGCGCCTCTCAGGATGGAACCGT
CGTCATCTGGACCGCGCCAAAAGAAGGCGAGCAGTGGGAAGGCAGGGTCCTGAATGATTTCAGAACCCCTGTTTGGAGGC
TGTCGTGGTCGCTGACGGGCAACATCTTGGCGGTCTCCGATGGCAACAACAATGTGACCCTCTGGAAAGAAGCCGTCGAC
GGCGAATGGCAGCAAGTGACTACCGTCGAGCCATAGATGTTCCGCGTTCCGCCTCTAGTTGCGTTAGCAAT--TATCATC
ATGACCAATGTAGTTTCGCCATCTTGTTATTTCAGTGGATTTGATTATCATAATAACGCATCCGGTGCTGCGAGTTACTC
CCTCCGTTCCAAAATAAAGTTAGTACAAAGTTGGGTCATCTATTTTGGAACGGAGGGAGTATGTGATAGAATTGTGTTTG
TCACCACCTTTGTTGAAGCAGGCGATATTTTCAGTACCA-----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------ACAGTACAAGCATCCTCGAGGGTTTTGTGGTCTATAATCTATCA---------------
-----------AGAGGTCGTTTGTTGCAACGGAAGTTTCTTTGT---------------------------TTTCTTCCT
GGGAGGTCATGCTGCTGTTGCATGTTCGTTTGAAAATAAACAAAAACAAATCCAATTTCCTGTGAATAAGCATATATTCA
TGAGCAGCTGCTGAACATCAGCGGAATTGCGGA---------------------------------------------AC
ACGTGAGATATCATTCAGGGTGTCCATGGCTGTGGCGTGCAGCCGAGCCAGCAAATTTAGTTTAACTGAACCCAATTGAC
TCCGAACTTCTGTCGGAGT-----CTGCGCCCAATCGACCCACAGTTGTCCACAACTCGGCAGCCAATCCGCCAGACAAG
AACAGGCAACAAAAC---ACCGCCCCGAACTGACGGCGAGCACATGAGACCATCGGCTCAACACCGCCTGAACTA-----
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----------------------------------------------------------------------TACTCTTGAA
TTGAAACAACCAGAGAAAGTCATTCTGTTGGAGTATACAATTAAGGTTCTCATTGTTACGGTACGGGCGCTAACAGGAAT
TCACGATTGCCAACCGGGATTAAGAGGAACAATGCTCGAGAAAAGAATTAGCGAATACGGGATATACTCCGCAGTGGCAT
TACACACAGCATACGCATATAAGTATGTCTGTTATTTAGGTAGTTGCCTTGCATAACATGAGCATGCTCAGAAACTTGAA
CAAG--------------------CCTTGCTTTTCTATACTACTCCTCATGCCTTCTTCAACACTTTGAGCAGCATCGAT
GCCGCTGTACCAAACAGATTT
>chr1D_2
-ATCGGTTGTTTGACGGTTGCAAATGTTATATTTATACTTAATGCACCATTTGAATGCATCTCCAAATAGTGCATGATAC
TTTCTAAGAAATTGTGATGTTG--------ATGATACTGTCTTCTGAATTCTTAATTACTGTGAAGTGTCGATTTCTGTG
AAGCAAAAGATGTTGTAGTTCTCGTGACATGGCCTTATTGCTGTCTTGTCCTTTGTTATAAGATGTTCAAAGTGAACAAT
ATTTAGTTCTATTATTGTCAACTAGCTGGACACTGTTTTGTTGCCAATCACAATTTCCCTGAGCATGTTATTAAATAAAA
CCATCTCATGCCATGCCATGCATTAT-ACTATGGGAGAAGAGAAACAAGTTAAAAACTTGAAAGACATTTTTGTCTTCTA
GGAATGTCTAAGTTTCTTCCTTGGATTTCCCAGTAGTATCTTTGTATATTGTTGCCTAGAATTCCTTGTTTATTAGGCTA
ATTTTG-TCACAGGATATCTAAATATTAGTCAGACAGGTTTATACTT---------------------------------
--------------------------------------------------------------------------------
------------------GCGATCACCATGATTGTAATAAGCAGTCAGATTTCATTTTGTTATTTTACAGAAAAAAGT-G
TATTGACATGCTGGTAGCAAGGTAGTGTATGTATCTTGTGTACCAAAATTGTTATGAATTATAATTGTAATATCATAATT
TTTATAACTTCTAACTGTAACA--------ACTCAGCTCCTTATGTTGTGAAATGCAACTATGTTACTTGTATCAGTGAA
TTGTATACTGC---ATTTTTTT--CTTTATTCTTTAACTCGATGTCCTCTAAATGTTAGTTTTCTATTACTGGCAGATAG
GAGCCTGAGGTGGTCAGGACAG-----------AACAGTTGGGTACTACTTTAAAGCTGACACATAC---CTGGAACAAT
GCCGCCTCATAAGATAGAGACTGGCCACCAAGATGTGGTGCATGACATCGCAATGGATTACTATGGGAAGCGTATTGCCA
CTGCCTCCTCTGATAACACAATCAAGATCATTGGCGTAAGTGGCACCTCGCACCAGCAACTTGCTACTTTGAGCGGACAC
GAGGGCCCAGTCTGGCAAATCGCATGGGCTCATCCCAACTATGGTTCAATGCTTGCATCCTGCAGCTACGATGGTCGGGT
CATCATATGGAAAGAAGGGAGTAAGCCCGATGAGTGGGCACAGGCACACACTTTCAATGAGCACAAGTCTTCTGTAAATT
CCATTGCTTGGGCGCCTCACGAGCTCGGCCTCTGCTTGGCTTGCGGTTCGTCTGATGGGAACATTTCCGTGTTCATGGCT
CGTTCTGATGGAGGGTGGGAGACGACGCGCATCGATCAGGCACATCCAGTGGGCGTCACCTCTGTTTCCTGGGCTCCGGC
AATGGCGCCGGGCGCTCTAATCAGTCCAGGGCCTTCTGGGCAGTTCGAGTATGTTCAGAAA-TTGCTTCTGGTGGCTGCG
ACAACACGGTTAAGGTGTGGAAGCTCACGAACGAGAGTTGGAGGATGGACTGCTTTCCGGCCCTTCAGATGCACAGGGAC
TGGGTGAGGGACGTCGCTTGGGCGCCGAACCTAGGGCTCCCTAAGTCCACGATTGCCAGCGCTTCTCAGGATGGAACCGT
CGTTATCTGGACCACACCGAAAGAAGGTGAGCAGTGGGAAGGCAGGGTCCTGAATGTTTTCAGAAACCCTGTTTGGAGGC
TGTCGTGGTCGCTGACGGGCAACATCTTGGCGGTCTCCGATGGCAACAACAATGTGACCCTCTGGAAAGAAGCCGTTGAC
GGTGAATGGCAGCAAGTGACTACCGTCGAGCCATAGATGTCCCGCGTTCTGCCTCTAGCTGCGTTAGTAATTATATCATA
ATGGCCAATGTAGTTTTGCCATCTTGTTATTTCAGTGGATTTGATTATCATAACAATGCGTCCGGTGCTGCAA-T-----
-----------------------------------------------------------TATGTGATGGAATTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNACCAAAAGCGCAAACATCTTAGAGGGTTTTGTGGTCTATAATCTTCAAAAGTTGTGTCACTTC
CGAATCCATTCAGAGATGATTTGTTGCAACAGCAGCTTGTTTGTTGCCTTGTTCTCC-----------TGCTTTCTTCCT
GGGAGGTCATGCTGCTGTTGTATGTTCGTTTGAAAATAAACAAAAACAAATCCAGTTTCCTGCGAATAAGCATATATTCA
TGAGCAATTGCTGAACATCAGCGGGAATTGACG-----------------TCAGATGGAGGGAGGCAAGCAACACAACAC
ACGTGAGATAGCATTCAGGGTGTCCATGGC------GTGCAGCTGAGCCAGCAAATTTAGTTTAACTGAACCCAATTGAC
TCTGAACTTCTGTTGGAGTATTTTCTGCGCCCAATTAACCCACAGTGGTCCACCACTCTGCAGCCAATCCGCGAGACAAG
AACAGGCAAACAAAGCTCATCGCCCCAAAGAGATGGCAAGCACATGAGACCATCGACTCAACACCGCCTGAAC-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------TACTCTTGAA
TTGAAACAATGGGAGAAAGTTATTCTGTGGGAGTATACAGTTAAGGTTCTCATTGTTACGGTACGGGCGCTAACAGGAAT
TCACGATTGCCAACCGGGATTAAGAGGAACAATGCCCGAGAAAAGAATTAGCGAATACGGGACATACTCCGCAGCGGCAT
GACACACAGCATACGCATATAAGTATGTCTGTTATTTAGGTAGGTGCCTTGCATAACATGAGCATGCTCAGAAACTTGAA
CAAGAAAACCAGCATTCAAGGTGGCCTTGCCTTTCTATACCA---CTCATGCCCTCTTCAGCACTTTGAGCAGCATCGAT
GCCGCTGTACCAAACAGCTTT
>chr1A_2
-ATCGGTTGTTTGATTGTTGCAAATATTATATTTCTACTTTATGCACCGTCTTATTGCATCTCCAAATAGTGCATGATAC
TTTCTAAGAAGTTTCGATGTTGATGGTAGTATGGTACTGTCTTCTGAATTCTTAATTACTGTGAAGTGTTGATTTCTGTG
AAGTAAAATAGCTTGTAGTTCTCGTGCCACGGGCTTATTGCTGTCTTGTCCTTTGTTATAAGATGTTCAAAGTGAACAAT
ATTTAGTTCTATTATTGTCAACTAGCTGGACACTGTTTTGTTGCGAATCACAATTTCCATGACCATGTGATTAAATAATA
CCATCTCATGCCATGCCATGCATGTACACTATGGGAGAAGAGAAATAAGTTAAACACTTGGAAGATAGTTCTATCTTCTG
GGGATGTCTAAATCTCTTCCTTGAATTTCCCAGTAGTATCTTGGTATATTGTTGCCTAGAACTCCTTGTTTATTAGGCTA
TTTTGGTTCACAGGATCTCTAAGTATTAGTCAGACAGGTTTATACTT---------------------------------
--------------------------------------------------------------------------------
------------------GTGATCACCATGATTATAATAAGCAGTCAGATATCATTTTGTTATTTTAGGG-AAAAATT-G
TATTGGCATGCTGGTAGCAAGGTAGTTTATGTATCTTGTGTACCAAAATTGTTATGACTTATAATTGTAATATCATAATT
TTTATAACTTCTGACTGTAACATGAAACACACTCAGCTCCTTATGTTGTGAAATGCAACTATGCTACTTGTATCAGTGAA
CTGTATACTGCATAATTTTTTT--CTTTATTCTTTAACTCGATGTCCTCTAAACATTAGTTTTATATTACTGGCAGATAG
GAGCCTGAAGTGGTCAGGACAG-----------AACAGTTGGTTACTACTTTAAAGCTGATGCATAC---TTGGAACAAT
GCTGCCTCATAAGATAGAGACTGGCCACCAAGATGTGGTGCATGACATCGCAATGGATTACTACGGGAAGCGTATTGCCA
CTGCCTCCTCTGATAACACAATCAAGATCATTGGCGTAAGTGGCACCTCGCACCAGCAACTTGCTACTTTGAGCGGACAC
GAGGGCCCAGTCTGGCAAATCGCATGGGCTCATCCCAAGTATGGTTCAATGCTTGCATCCTGCAGCTATGATGGTCGGGT
CATCATATGGAAAGAAGGGAGTAAGCCCGATGAGTGGGCACAGGCACACACTTTCAATGAGCACAAGTCTTCTGTCAATT
CCATTGCTTGGGCGCCTCACGAGCTCGGCCTATGCTTGGCTTGCGGTTCATCTGATGGGAACATTTCTGTCTTCATGGCT
CGTTCTGATGGAGGGTGGGAGACGACGCGCATCGACCAGGCACATCCAGTGGGCGTCACCTCTGTTTCCTGGGCCCCATC
AATGGCGCCGGGTGCTCTAATCAGTCCAGGGCCTTCTGGGCAGTTCGAGTATGTTCAAAAACTTGCTTCTGGTGGCTGCG
ACAACACAGTGAAGGTGTGGAAGCTCACCAACGGGAGTTGGAGGATGGACTGCTTCCCCGCCCTTCAGATGCACAGGGAC
TGGGTGAGAGACGTCGCATGGGCACCGAACCTAGGCCTCCCAAAGTCCACAATCGCCAGCGCTTCTCAGGATGGAACCGT
CGTCATCTGGACCGCACCGAAGGAAGGTGAGCAGTGGGAAGGCAGGGTCCTCAATGATTTCAGAACCCCTGTTTGGAGGC
TGTCGTGGTCGCTGACGGGCAACATCCTGGCGGTCTCCGATGGCAACAACAATGTGACCCTCTGGAAAGAAGCCGTTGAC
GGTGAATGGCAGCAAGTGACTACCGTCGAGCCATAGATGTCCCGCGTTCTGCCTCTAGCTGCATTAGTAATTATCATCA-
--GACCAATGTAGTTTCACCATCG---------AGTGGATTTGATTATCATA-CAACGTGTACGGTGCTGCAACT-----
-----------------------------------------------------------TATGTGATGGAATTGTGTTTG
TCACCCCCCTTGTTGAAGCGGGCGATATTTCTGTTACCG-----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------AAAGCGCACACATCTTTGCGTGTTTTGTGGTCTATAATCCATCG---------------
-----------AGAGATC----------ACAGAAGTTTCTTTGTTGCCTTGTTCTTTTTCTGTTCTTTTGCTTTCTTCCT
GGGAGGTCATGCTGCTGTTGGATGTTCGCTTGAAAATAAACAAAAACAAATCCAATTTCCTGTGGATAAGCATATATTCA
TGAGCAATTGCTGAACATCGGCGGGAATTGGCGTCAGATGTTTATCGGCATCAGGTGGAGGGAGGCAAGCAGCACAACAC
ACGTGAGATAGCATTCAAGGTGTCCATGGC------GTGCAGCTGAGCCAGCAAA--------AACTGAACCCAATTGAC
TCTGAACTTCTGTCAGAGTATTGTCTGCGCCCAATCAACCCACGC-----------------------------------
--------AACAAAGCTTACCGCCCCGAACAGACGGCAAGCACACGAGACCATCGGCTCAACACCGTCTGAACTATACTC
TTGAATTGAAACAACTATACTCTTGAATTGAAACAACCGGAGAAAGTTATTCTAGGGGAGTATACAGTTAAGGTTCTCAT
TGTTATGGTATGGGCACTAATAGGAATTCACGATTGCCAACCGGGATTAAGAGAACAATGCTCGAGAAAAGAATTAGCGA
ATACGACAAGCACACGAGACCATCGGCTCAACACCGTCTGAACTATACTCTTGAATTGAAACAACTATACTCTTGAATTG
AAACAACCGGAGAAAGTTATTCTAGGGGAGTATACAGTTAAGGTTCTCATTGTTATGGTATGGGCGCTAACAGGAATTCT
CGAATACGACAAGCACACGAGACCATCGGCTCAACACCGTCTGAACTATACTCTTGAATTGAAACAACTATACTCTTGAA
TTGAAACAACCGGAGAAAGTTATTCTATGGGAGTATACAGTTAAGGTTCTCATTGTTACGGTATGGGCGCTAACAGGAAT
TCACGATTGACAACCGGGATTAAGA-GAACAATGCTCGAGAAAAGAATTAGCGAATACAGGATATACTCCACAGAGGCAT
TACATACAGCATACGCATATAAGTATGTCTGTTATTTAGGAGGGTGCCTTGCATAACACGAGCATGCTCAGAAACTTGAA
CAAGAAAACCAGCATGCAAGGTGGCCTTGCCTTTCTATACTACTCCTCATGCCCTCTTCAGCACTTTGAGCAGCATCGAT
GCCGCTGTACCAAACAG----
>chr1B_2
-ATCGGTTGTTTGACGGTTGCAAATGTTATATTTATCCTTAATGCACCATTTGAATGCATCTCCAAATAGTGCATGATAC
TTTCTAAGAAGTTGTGATGTTG--------ACGATACTGTCTTCTGAATTCTTAATTACTGTGAAGTGTCGATTTCTGTG
AAGCAAAAGATGTTGTAGTTCTCGTGCCATGGGCTTGTTGCTGTCTTGTCCTTTGTTATAAGATGTTCAAAGTGAACAAT
ATTTAGTTCTATTATTGTCAACTAGCTGAACACTGTTTTGTTGCCAATCACAATTTCCCTGAGCATGTGATTAAATAAAA
CCATCTCATGCCATGCCATGCATTAT-ACTATGGGAGAAGAGAAACAAGTTAAACACTTGAAAGACATTTTTATCTTCTG
GGGATGTCTAAGTTTCTTCCTTGGATCTCCCAGTAGTATCTTTGTATATTGTTGCCTAGAATTCCTTGTTTATTAGGCTA
ATTTTG-TCATAGGATATCTAAATATTAGTCAGACAGGTTTATAGTT---------------------------------
--------------------------------------------------------------------------------
------------------GCGATCACCATGATTATAATAAGCAGTCAGATTTCATTTTGTTATTTTAC-G-AAAAAAT-G
TATTGACATGCTGGTAGCAAGGTAGTGTATGTATCTTGTGTACCAAAATTGTTATGAATTATAATTGTAATATCATAATT
TTTGTAACTTCTAATTGTAACA--------ACTCAGGTCTTTATGTTGTGAAATGCAACTATGTTACTTGTATCATTGAA
TTGTATACTGC---ATTTTTTT--CTTTATTCTTTAACTTGATGTCCTCTAAATGTTAGTTTTCTATTACTGGCAGATAG
GAGCCTGAGGCGGTCAGGACAG-----------AACAGTTGGGTACTACTTTAAAGCTGACACATAC---CTGGAACAAT
GCCGCCTCATAAGATAGAGACTGGCCACCAAGATGTGGTGCATGACATCGCAATGGATTACTATGGGAAGCGTATTGCCA
CTGCCTCCTCTGATAACACAATCAAGATCATTGGCGTAAGTGGCACCTCGCACCAGCAACTTGCCACTTTGAGCGGACAT
GAGGGCCCAGTCTGGCAAATTGCATGGGCTCATCCCAAGTATGGCTCCATGCTTGCATCCTGCAGCTACGATGGTCGGGT
CATCATATGGAAAGAAGGGAGTAAGCCCGATGAGTGGGCACAGGCACACACTTTCAATGAGCACAAGTCTTCTGTCAATT
CCATTGCTTGGGCGCCTCATGAGCTCGGCCTATGCTTGGCCTGTGGTTCATCTGATGGGAATATCTCAGTCTTCATGGCT
CGTTCTGACGGAGGGTGGGAGACGACGCGCATCGATCAGGCACATCCAGTGGGAGTTACCTCTGTTTCCTGGGCCCCATC
AATGGCGCCGGGTGCTCTAATCAGCCCAGGGCCTTCTGGGCAGTTCGAGTACGTCCAGAAACTTGCTTCTGGTGGCTGCG
ACAACACGGTCAAGGTGTGGAAGCTCACCAACGGGAGTTGGAGGATGGGCTG----------------------------
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---------------------
>chr5A_798
TTTTAAA-------------------------------------------------------------------------
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---------------------ATGAAACACACCCAGCTCCGTATGTAC--AAATGCAACTATGCTACTTGTTTCAACGAA
TGGTACTATTTAAATTTTACTCTGCTTTATTCTTTGACGTAATGTTCTTTAAATGTTAGGTTTCTGTTACTATCAGATAG
GAGCCTGAGGTGGTCAACGAATAACATTTGGTTAACA-----------CTTAAAAGCTGACGTTACGTAATTGGAACAAT
GCCTCCTCATAAGATAGAGACTGGGCACCAGGATGTGGTGCATGACATCGCGATGGATTACTACGGGAAGCGCCTCGCCA
CTGCATCCTCTGATAACACAATAAAGATCATTGGCGTAAGTGGCACCTCGCAGCAGCAACTTGCTACTTTGAGCGGACAC
CAGGGCCCAGTTTGGCAAGTCGCGTGGGCTCATCCTAAGTATGGTTCCATGCTTGCATCCTGCAGCTATGATGGGCGGGT
TATAATATGGAAAGAAGGGGGCAAACCTGATGAGTGGACACAGTTTCACACTTTCACTGAGCACAAGTCTTCTGTAAATT
CCATTGCTTGGGCGCCTCATGAACTCGGCATCTGCTTGGCTTGTGGTTCATCTGATGGGAACATTTCAGTCTTCACAGCT
CGTTCTGATGGTGGGTGGGAGACGACGCGCATCGACCAGGCTCATCCAGTGGGCGTGACCTCTGTTTCCTGGGCTCCAGC
GATGGCCCCTGGTGCCCTAATCAGCCCAGGGCCTTCTGGGCAGTTTGAATATGTTCAGAAACTTGCTTCTGGTGGCTGTG
ACAACACTGTCAAGGTGTGGAAGCTCACCAACGGAAGTTGGAGGATGGACTGCTTCCCAGCCCTTCAGATGCACAGGGAC
TGGGTGAGAGACGTCGCCTGGGCTCCAAACCTAGGCCTCCCAAAGTCCACAATCGCCAGCGCCTCTCAGGATGGAACTGT
AGTCATCTGGACAGCGCCGAAAGAAGGCGAGCAATGGGAAGGCAGGGTTCTGAATGATTTCAGAACCCCTGTTTGGAGGT
TGTCATGGTCGCTGACAGGAAACATACTGGCGGTCTCTGATGGCAACAACAATGTGACCCTGTGGAAAGAAGCTGTGGAC
GGTGAATGGCAGCAAGTGACTACCGTCGAGCCATAGATGTTTCGTGTTCTACCTCTAGCTGCATT---------------
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---------------------
>chr5B_798
TTTTAAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------ATGAAACACACCCAGCTCCATATGTAC--AAATGCAACTATGCTACTTGTTTCAGCGAA
TGGTACTATTTAAATTTTACTCTGCTTTATTCTTTGACGTAATGTTCTCTAAATGTTAGGTTTCTGTTACTATCAGATAG
GAGCCTGAGGTGGTCAACGAAG-----------AACA-----------CTTAAAAGCTGACGTTACGTAATTGGAACAAT
GCCTCCTCATAAGATAGAGACTGGGCACCAGGATGTGGTGCATGACATCGCGATGGATTACTACGGGAAGCGCCTCGCCA
CTGCATCCTCTGATAACACAATAAAGATCATTGGCGTAAGTGGCAGCTCGCAGCAGCAACTTGCTACTTTGAGCGGACAC
CAGGGCCCAGTTTGGCAAGTCGCGTGGGCTCATCCTAAGTATGGTTCCATGCTTGCATCCTGCAGCTATGATGGGCGGGT
TATAATATGGAAAGAAGGGGGCAAACCTGATGAGTGGACACAGGCTCACACTTTCACTGAGCACAAGTCTTCTGTAAATT
CCATTGCTTGGGCGCCTCATGAACTCGGCATCTGCTTGGCTTGTGGTTCATCTGATGGGAACATTTCAGTCTTCACAGCT
CGTTCTGATGGTGGGTGGGAGACGACGCGCATCGACCAGGCTCATCCAGTGGGCGTGACCTCTGTTTCCTGGGCTCCAGC
GATGGCCCCTGGTGCCCTAATCAGCCCAGGGCCTTCTGGGCAGTTTGAGTATGTTCAGAAACTTGCTTCTGGTGGCTGTG
ACAACACTGTCAAGGTGTGGAAGCTCACCAACGGGAGCTGGAGGATGGACTGCTTCCCAGCCCTTCAGATGCACAGGGAC
TGGGTGAGAGACGTCGCCTGGGCTCCAAACCTAGGCCTCCCAAAGTCCACAATCGCCAGCGCCTCTCAGGATGGAACTGT
TGTCATCTGGACAGCGCCGAAAGAAGGCGAGCAATGGGAAGGCAGGGTTCTGAATGATTTCAGAACCCCTGTTTGGAGGG
TGTCGTGGTCGCTGACAGGAAACATACTGGCGGTCTCTGATGGCAACAACAATGTGACCCTGTGGAAAGAAGCTGTGGAC
GGTGAATGGCAGCAAGTGACTACCGTCGAGCCATAGATGTTTCGTGTTCTACCGCTAGCTGCATTTACCGC-----TATC
ATAATAACAAATATAGT---------------------------------------------------------------
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---------------------
>chr3D_932
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------GATAG
GAGCCTGAGGTGAAGAACAGTC-------GGTTAACA-----------CTTAAAAGCTGACGTTACGTAATTGGAACAAT
GCCTCCTCATAAGATAGAGACTGGACACCAGGATGTGGTGCATGACATCGCGATGGATTACTACGGGAAGCGCCTCGCCA
CTGCATCCTCTGATAACACAATAAAGATCATTGGCGTAAGTGGCACCTCGCAGCAGCAACTTGCTACTTTGAGCGGACAC
CAGGGCCCAGTTTGGCAAGTCGCATGGGCTCATCCTAAGTATGGTTCCATGCTTGCATCCTGCAGCTATGATGGGCGGGT
TATTATATGGAAAGAAGAGGGTAAACCTGATGAGTGGACACAGGCTCACACTTTCACTGAGCACAAGTCTTCTGTAAATT
CCATTGCTTGGGCGCCTCATGAACTCGGCATCTGCTTGGCTTGTGGTTCATCTGATGGGAACATTTCAGTCTTCACAGCT
CGTTCTGATGGTGGGTGGGAGACGACGCGCATCGACCAGGCTCATCCAGTGGGCGTGACCTCTGTCTCCTGGGCTCCGGC
GATGGCCCCGGGTGCCCTAATCAGCCCAGGGCCTTCAGGGCAGTTTGAGTATGTTCAGAAACTTGCTTCTGGTGGCTGTG
ACAACACAGTCAAGGTGTGGAAGCTCACCAACGGGAGCTGGAGGATGGACTGCTTCCCAGCCCTTCAGATGCACAGGGAC
TGGGTGAGAGACGTCGCCTGGGCTCCAAACCTAGGCCTTCCAAAGTCCACAATCGCCAGCGCCTCTCAGGATGGAACTGT
TGTCATCTGGACCGCGCCGAAAGAAGGCGAGCAATGGGAAGGCAGAGTTCTGAATGATTTCAGAACCCCCGTTTGGAGGG
TGTCGTGGTCGCTGACAGGAAACATACTGGCGGTCTCTGATGGCAACAACAATGTGACCCTGTGGAAAGAAGCTGTGGAT
GGCGAATGGCAGCAAGTGACTACCGTCGAGCCATAGATGTTCCGTGTTCTACCTCTAGCTGCATTTATCGC-----CATC
ATAACAAATGTAGTTT----------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------
>chr3B_1059
--------------------------------------------------------------------------------
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--------------------------------------------------------ATTACTATGGGAAGCGCCTCGCCA
CTGCATCCTCTGATAACACAATAAAGATCATTGGCGTAAGTGGCACCTCGCAGCAGCAACTTGCTACTTTGAGCGGACAC
CAGGGCCCAGTTTGGCAAGTCGCGTGGGCTCATCCTAAGTATGGTTCCATGCTTGCATCCTGCAGCTATGATGGGCGGTT
TATAATATGGAAAGAAGCGGGTAAACCTGATGAGTGGACACAGGCTTACACTTTCACTGAGCACAAGTCTTCTTTAAATT
CCATTGCTTGGGCGCCTCATGAACTCGGTATCTGCTTGGCTTGTGGTTCATCTGATGGGAACATTTCAGTCTTCACAGCT
CGTTCTGATGGTGGGTGGGAGACGACGCGCATCGACCAGGCTCATCCAGTGGGCGTGACCTCTGTTTCCTGGGCTCCGGC
GATGGCCCCTGGTGCCCTAATCAGCCCAGGGCCTTCAGGGCAGTTTGAGTATGTTCAGAAACTTGCTTCTGGTGGTTGTG
ACAACACTGTCAAGGTGTGGAAGCTCACCAACGGGAGCTGGAGGATGGACTGCTTCCCAGCCCTTCAGATGCAC--GGAC
TGGGTGAGAGAGGTCGCCTGGGCTCCAAACCTTGGCCTCCCAAAGTCCACAATCGCCAGTGCCTCTCAGGACGGAACTGT
TGTCATCTGGACAGCGCCGAAAGAAGGCGAGCAATGGGAAGGCAGAGTTCTGAATGATTTCAGAACCCCTGTTTGGAGGG
TGTCGTGGTCACTGACAGGAAATATACTGGCGGTCTCTGATGGCAACAACAATGTGACCCTGTGGAAAGAAGCTGTGGAT
GGCGAATGGCAGCAGGTGACTACCGTCGAGCCATAGATGTTCCGTGCTCTACCTCTAGCTGC------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>SNPs
S------------------------------------------S------------------------------------
-----------------------------------------S--------------------------------------
-----------------------------------------------------SS-------------------------
---------------------------S---------------------------------S------------------
----------S------------------------------------------S--------------------------
--------------------------------------------------------------------------------
----------------S------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS-----------S-------S---------------------------------------SS-
----------------------S---------------------------------------------------------
----------S-------------------------------------------------S------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
----------------------------------------------------------------------------S---
-------------------------------------------------S--------S---------------------
-----------------------------------------------------S-----S-----------S-S-SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S------------
-----S--S----------S----------SSSS----S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S--SS---S----S-S------------------------------------------
---------------S--S-----------S-------------------------------------------------
--------------------S-----------------------------------------------------------
------SS----------------S-S-SS-SS-----------------------------------------------
----------S-------------------SSSSSS-------S------------------------------------
--S---------------------------------S---------S------S----S-------------S-------
---------SS---S---------------S------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------S-------S----------S----------------------------------------
--------------------------------------------------------------------------S-----
-------------------------------------------S------------------------------------
------------------------------S----------------------S------S-------------------
-----------------S---
>forward_639
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TGAGGGTGTTGCAGTTAGTGT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>reverse_2811
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TCATTCAGGGTGTCCATGGC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
