>input_sequence_65727
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--------------------------------------------------------------CGCCTCGCCT------TC
GCTACCTAGCACACAAACCCTAACCCTAGG-CCCCCAC------------------------CGCCATGGCCAGCGGCAA
CATT---------TACATCTCCATCATCGGAGATGTCGTGGCCAAGGTTACCAAGTGCTTCATCGCCGACGGCGCTGGCG
ATGCCGTCCTCAACGAGCTGCAGTCTCTCTGGGAGACGAAGTTGCTGCACTGTGGCGCAATCTCAGGGAACACCGACCGC
AACAGGGCTCCCCCAGCGTCCG------------------CTTCACCCGTGCGCGACCTCAACGTGCCCTACGAGGCCAC
GTCCGAGGAGTACGCCACCCCAACCGCCGACATGCTCTTCCCACC------------GACGCCGATCCAGACACCACTTC
CAGCTGGGATTGATACGGGGC-----------------------------------------------------------
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------------CGTGGGACTATGCCCCATCGCCGATCGGTGACATGAGAAACGGGATGGGGATGATGAACGGGGCTGAT
CCAGAAACTGGCCGCCCAAGCCCTTTCATGCAACCTCCATCGCCCTGGATGAATCAGAGACCACTGGGGGCTAATGTGAA
CCTTGCTTTTGCTTATGATGAGGAGATCCGGACGATGGTGCAACCCCAGCCACTGACGACTAAGGATTTTCTCGTGATGT
CTTGTGGAAAACGGACGAGGGATGAATATCCTTCGGCTGCTTCATTTGTGCCACAACAGGATGGATGTGCAGACCAGGTT
GCGGGT--------------------------------------------------------------------------
----------------------------GGTGTT---GATGATGAAGAACCTCCTCTTAATGAAGATGACGACGAC---G
------------TAGATGACTTTGATGACACGCAGCACCTTGTCCTGGCACAGTTTGACAAGATAACAAGGACAAAGAAT
CGCTGGAGGTGCACTTTGAAGGATGGAATCATGCATTTGAACGGCAGAGATGTTCTATTCAGCAAGGCTTCAGGAGAGTT
TGATTTTTGAATT-CATTTCATGGTAATTAAA------------------------------------------------
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>chr3D_1_TraesCS3D01G326400
ATAATGAATTGGTATGCTGGGTGCTTACCTGAGCAAGAAGGAGGAATACCCACGATCTCCCGGTCATTGTATCTCGATGA
TGCAAACAACCAAATTATTACAGGTTAGTGAAGTGCATAAAGGGAAAAAGAAAAGGCTAGTGACAATGAGAAAGAATATG
TCTACAACATCAATGAAACTATCCAATGGCGACGGCCAGTTTTGTTTAATTTCAGTGTC-TCAACATTTCTTGGAAAAAA
ATCTGAACAATATTTCTTTAAAAATGCGAATAATGGTTGAAAATTGTGAAGAAATTTGGAAGTCGGACAAACTTTTAAGA
CGTGAACAATTTTTGAGAAAATTGAAAACAAATTTGAGAAACATGAACAAACTTTTGAAATTCGAAACCTTTATTGAA--
---TTTTTTGTGATGACATTTTTTAAATATATATT-GAAAATTTGGTAATATACACTGAACAAATTTTAAAATACACACC
AAAC-TTTTTGTGATATAGGTTGAACAATATCTAAATACACATTGAAGATTTTTGTGATTTATGTTAAAAATATATTTAT
AACGCATTTAAAATTTTGTGATATATTCT-TAAAAAAATTAAAATACATGATGAAAATTATTTTAAATATGTCAAAAGAA
TTCATA--ATATAGGATGAACATTTCCTTAAATACAAGATGAACATTTGTTC--ATAACACAAAATGAAATTTGTGTAAT
ACACGG-AAAAAATGATGTAAGGATTAAAAAAAGGAAAAACGTAAAATAAAACAAAATAAACTGAAACAGAAAAAAGGA-
------AAAAAAGAAAGAAACAGAAAAGAGAAGAAACAGCAGAGCTA-CCGTGGGCCGGCCCAAACTGGGGCTTCGGGAC
GCTGAGCTTCAGCGAAGCCACGTACTACGGTCCGGTGTTCCCTCAAATCAATCAGTGGTTCCTTTAGTCCCACCTCGCCT
GGTGAAGCGACGGGGTCGGAGAGCTTCGGCTATATAAGAGGCCGCCCCCTCGAACTGCAGCCCGCCTCGCCT------TC
GCTACCTAGCACACAAACCCTAACCCTAGG-CCCCCAC------------------------CGCCATGGCCAGCGGCAA
CATT---------TACATCTCCATCATCGGAGATGTCGTGGCCAAGGTTACCAAGTGCTTCATCGCCGACGGCGCTGGCG
ATGCCGTCCTCAACGAGCTGCAGTCTCTCTGGGAGACGAAGTTGCTGCACTGTGGCGCAATCTCAGGGAACACCGACCGC
AACAGGGCTCCCCCAGCGTCCG------------------CTTCACCCGTGCGCGACCTCAACGTGCCCTACGAGGCCAC
GTCCGAGGAGTACGCCACCCCAACCGCCGACATGCTCTTCCCACC------------GACGCCGATCCAGACACCACTTC
CAGCTGGGATTGATACGGGGC-----------------------------------------------------------
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------------CGTGGGACTATGCCCCATCGCCGATCGGTGACATGAGAAACGGGATGGGGATGATGAACGGGGCTGAT
CCAGAAACTGGCCGCCCAAGCCCTTTCATGCAACCTCCATCGCCCTGGATGAATCAGAGACCACTGGGGGCTAATGTGAA
CCTTGCTTTTGCTTATGATGAGGAGATCCGGACGATGGTGCAACCCCAGCCACTGACGACTAAGGATTTTCTCGTGATGT
CTTGTGGAAAACGGACGAGGGATGAATATCCTTCGGCTGCTTCATTTGTGCCACAACAGGATGGATGTGCAGACCAGGTT
GCGGGT--------------------------------------------------------------------------
----------------------------GGTGTT---GATGATGAAGAACCTCCTCTTAATGAAGATGACGACGAC---G
------------TAGATGACTTTGATGACACGCAGCACCTTGTCCTGGCACAGTTTGACAAGATAACAAGGACAAAGAAT
CGCTGGAGGTGCACTTTGAAGGATGGAATCATGCATTTGAACGGCAGAGATGTTCTATTCAGCAAGGCTTCAGGAGAGTT
TGATTTTTGAATT-CATTTCATGGTAATTAAAGATGATGTTTTAGGTGCCTGCTGTACCTACTGTCTTTTGTCTTTAACA
CAAGGA------AGGGAAGGTGACAAAAGAGTACTGGAGTTGTGGCGAGTTTGGCACTATGATCATGTCTC-GTGTTTTC
CTGTTGATTGAGGCTTGCTTCACCCAC---TTGGTTTGTTGACCATAACTCATGT--CACTGTAAAAAGGGAGT------
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---------------------------------------------------ATAAACGAGACTCAAAGGTGGTTGAGAAA
CATTTACTAAAGACTGAAGAAAGATGACTTGAAAGGAAATAAACGGAGAAGGAAAAGAGTCAAGAACGATACCCAGGAAT
AGACTACCAGAATGAGATTAACAGTGTGCAACTATTGCCCAAAACTGAACTGACAACTATCACTGAAACAACTGATATGA
CTGAAGAAACT---GAGGACTGAAGAGAGATAACTGAAATAATCCTGAAAA-CCCAAGAAGTACACTGAAAATTGTGGAC
ATTTTCTTGAGAGATGGTCACTTCAAGGTGGTGGGACGATCTTATCTATAATAGTATAAATCCAGGAACGCAGGAACTGC
AGATACACGCTCGAGTAGAATTCGACTTACAAAAAAGGCTCGAACCTAAATTCTGCTAAAAAACCGACTCGACCAGAACT
GCGCAACCGAGTGCCGGCGCCTTGCCGCCACACCCCAGGCCGGCCGGTACCCAACCTGAAGATGATCCCGTCCTTCTGCC
TCAGGAAAATCATCCTACAATGGACCGTAGGGACTGAGAAAGAAGAAGACATAAAAATAAGGTTAGGGGGATAAAAAGAA
AACCTCCTCCCGTTCAAAGTCGTCTTCAAGTACCTTTTTGATTCTTTACCAAGTATGGATGGATCAACTATAGGTTCGAG
TTTAGCCAAGATACGTACACGGCTAAGTGTATGAAAATCCAAGAGAAAATCATAAAATCTGAAAGCTAGGAAGGAGAAGA
CCGGGTGATTGAATATGACTTGCTAACAGATCCTACTCTTCCTTAAGCGAGTGCTCGTTAGTCGT
>chr5A_1
ATAATGAATTGATATGCCGGCTGCTTACTTGAGCAAGAAGGAGGAATACCCACGATCTATCGGTCATTGTATCTCGATGA
TGCAAACAACCAAATTATTACAGGTTAGTGAAGTGCATAAAGGGAAAAAGAAAAGGCTAGTGACAATGAGAAAGAATATG
TCTACAACATCAATGAAACTATCCAATGGCGACGACTAGTTCTGTTTAATTTCAATATC-TCAACATTTCTTGGG-AAAA
ATGTGAACAATTTTTCTTAAAAAATGCGAATAATGCTTGAAAATTGTGAAGAAATTTGGAAGTCGGACAAGCTTTTAAGA
CGTGAACAATTTTCGAGAAAATCGAAAACAAATTTGAGAAACATGAACAAACTTTTGAAATCCCAAA-CTTTGTTGAA--
---TTTTTTGCGATGATATTTTTTAAATATATACTGAAAAAATTGGAAATATACGCTGAACAAATTTTAAAATACACACT
GAACTTTTTTGTGATATAGGTTGAACAATATCTAAATACACATTGAACATTTTTGTGATATATGTTAAAAATATATTTGA
AACACATTTAAAAGTTTCTGATATATTCT-AAAAA-AATTAAAATACATGATGAAAATTATTTTAAATATGTCAAACATT
TTCTTA--ATATAGGATGAACATTT-CTTAAATACACGATGAACAATTCTGTGTATAACACAAATTGAAATTTGTATAAT
ACACGGGAAAAAATGATGAAAGGATTAAAAAAAGGAAAAACGTAAAACAAAACAAAATAAACTGAAACAAAAAAA-----
----GCAAAAAAAAAAGAAACAGAAAAGAGAAGCCGCT---GATCTA-CCGTGGGCCGGCTCAAACTGGGGCTTCGGGAC
GCTGAGCTTCAGCGAAGCCGCGTACTGCGGTCCGGTCTTCCC-------------TGGTACCTTTAGTCCCACCTCGTCT
GGTGAAGAGACGGGGTCGGAGAGCTTCGGCTATATAAGAGGCCGTCGCCGCGATCAGCAGCCCGCCTCGCCC------TC
TGCTACCTACACACAAACCCTAACCCTAGG-CCTCGAC------------------------AGCCATGTCCAGCGGCAA
CATT---------TACACCACCGTAATAGAAGACGTGGTGGCCAAGGTCCGTAAGGACTTCATCGCCGACGGGGCTGGCG
ACGCCGTCCTCAACGAGCTCCAGGCTCTCTGGGAGACGAAGTTGCTGCACTGTGGCGCAATCTCAGGGAACACCGACCGC
AATAGGGCTCCCCCCGCCGGAGCGTCCGCTGGAGGCGCGACTCCACCGGTGCACGATCTCAACGTGCCCTACGAGGCCAC
GTCCGAGGAGTACGCCACCCCAACCGCCGACATGCTCTTCCCACC------------GACCCCGATCCAGACACCACTTC
CAGCTGGGATTGATACGGGGCCGTGGGACTATGCCCCATCGCAGATCGGTGACATGAGAAACGGGATGGGGATGACGAAC
GGGGCTGATCGAGAGACTGGCCGCCCAAGCCCTTTCATGCAACCTCCATCGCCCTGGATGAATCAGAGACCACTGGGGCT
TGATGTGAACCTTGCCTTCGCTTATGAGGACCTAGAAGACCGGTTGATGCAACCCCAGCCACTGACAACTAAGGATTTTC
TGATGGCTTCTTGTGGAAAACGGAAGAGGGATGAATATCCTTCCGCTTCATTTGTGCCACAACAGGATGGATGTGCAGAC
CAGGTTGCGGGTGGTGTTGATGATGATGAACCTCCTCTTAATGAAGATGACGATGACGACGATGATGACATAGATGATGA
CTTTGATGAGAAGCAGCACCTTGTCCTTGCACAATTTGACAAGATAACAAGGACAAAGAATCGCTGGAAGTGCGCTTTGA
AGGGTGGAATCATGCATTTGAACGGCAGAGATGTTCTATTCAACAAGGCTTCGGGAGAGTTTGATTTTTGAATTTCATTT
CATGGTAATTAAAGAGGATATTTTAGGTGCCTGCCGTATCTACTGTCTTTAACACAAGGAAGGGAAGGTGACAAAAGAAT
ACTGGAATTGTGGCGAGTTTGGCACTATGAACATGTCTCGTGTTTTCCTGTTGATTGAGGCTTGCTTGGCCCACTTGGTT
TGTTGACCATAACTCATGTCACTGTCTTCAAGCTGGTGGGACGATCTTAGCTCATAAAGTGGTAGGTTTTTGTTGACCTA
GCCCGTAATGTGGTAGTTTTTTGCTATATACTCGGGTCGAGGTAGAAGTAGTCACGGTGAGATGAGTCAGCGATCTCAAA
GATGAAGACAAAGAGACACGCTCGTCCAGCCGGAGGACTCCTACGCCGAAGGACCAGCCGACCAAGACGTCACAAACACG
TTGTTGCTGACCGCATCGGCCTGTAGATGGTCCATGCTCACCTCCAGTCATTGTCCTCTAGCTGGTCCAGTGACCCAGGT
TGGCCCTTTGTGGATCCGTCCCTGGTTTGTCTGAACAAGGACCGACTGAACTGAAGTCCTCCGAAATTTGGGGCCGCCAT
TTGGGGGTCATGTTTGGTCACACGGGTTGCTTGTCCCTGGTTCTAGGCCTAATTCATCCTGATGTCTGCTATTCTGAAAA
CTCTTTGTCGTTTACTAGACATACCATGAACACTACCATCACATAGTTCCCTTCTGATATCTGTTCCTACCAATCAATCA
TCGAAGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGAAAGAGGGCCGTAA
TGACGACACATGAAGGGGCAGTACTATACCCACACACACGTTTAGTTATACTAAGACTTGATGTATGGTGGTTGATGGTC
TCTAGCTTAGCTAGTCTAATGGGAACCGGGAATATTCCAATTTGCAAGGAAGTAGGGTAGGTAGCTAGGTCATTAATCAT
AATCATGATCGTATTTGCAGACTGTTTCTCTGCAGGAAGCACCTTGTCCCACCATTTCGAATAAAGACCCAAGTTCATCA
CCGGCTACCATGCGCATGGATCAGAGCAATTGTTCCAGAGACAGGCACTGCAATCAGTGCGTGCATACATGATACGCCAG
TAGTCATCAAGAGTCATGGCCTTGTTTAAACCAGCAAGAACAATGGTCGCATGTAAGGCTGCTCCGCCTAGCGGGGTGGG
CAATTCTGTTGTCGCGGCAGACATATTGAGCACGCGCTAAGCCACTCGATCATACTTCAGGCCACCGGTCAATTGAAGTT
CTTTTCTTAGGGATCATCATGGTCAAATCCGGTCATTTTGATCAAGATGCCTTTTCCATACAGCTCCGCCAATAAAGTAG
GTTCAAATGTGTGTCTATGTGTACATGTTAGCATGAATTTGTCAAGTGTTTAATGTCCTGAAAGTAAATTTTTGTTTGAG
CATAAGAAGATTATTTGTATTATTCAGTAAACCAAACACTAGGCCAACTTGTAGAGCAGTTATATTCAACAACAGGTTAA
TAAAGAATAAAACAAATCGACAATAGCATATTTTGAGTGCTTCAAATCAGTTAGAGACGTAAGTTGCATTGAGGACAACC
AAAGGGTTATAATGTACAGACATTGAACTTTTGGAGCTGAACGTTGCTGAGAAAAGCAATGTTGTGAAAGTCTCTCGCGA
CGCGGCAAAACTATATGAAGGTTTGTGGAAGTGCAAACATCAGGGTGACAATTTCTAAAAGAAATTCTTTGAAAAAACTT
GAGCTTTATTCATTTGCAATAATCATTACATCGTTTATGAGGATCGGTACAATTTCATTATGTGGCTCCTCAAACACACT
AAAAAATACACGGAAAATATGATGAAAAGATAAAAAATGATAAACGTAAAATAAAATAAACAGAAAGAGAAAAAAAAGAG
AAAAAGAGAAAAAAGAAACAGAAAAGAGTAGAAACAGCAGAGCTACCATGGGCCGGCGAAACTGGGGCTTCGGGAGGCTG
GGCTTCAGCGAACCCACATACTACTGCGGTTCGGTCCTCCCTCAAATCAGTGGTTCCTTTAGTCCCACCTCGCCTGATGA
AGACAAGGTGTCGGAGAGCTTCGGCTATATAAGAGGCCGCCCCCTCGATCTGCAGCCCGTCTCGCCCTCGCTACCTAGCA
CACAAACCCTAACCCTAGGCCTCCCGCGCAATCCCTAAACTTAGCACGTCCACCGTCATGGCCAGCGGCAACGCGTCCAC
CGTCTACCTCTCCGTCGTCGAGGAAGTCCTCGCCAAAGTTCGTAAGGAGTTCATCACCTCCGGCGTTGGCGACGCCGTCC
TCAACGAGCTCCAGTCTCTCTGGGAGACGAAGTTGCTGCACTGTGGCGCAATCTCAGGGAACACCGACCGCAACAGGGCT
TCCCCCGCCGGAGCGTCCGCTGGAGGCGCGACTCCACCGGTTCACGATCTCAACGTGCCCTACGAGGCCACGTCCGAGGA
GTACGCCACCCCAACCGCCGACATGCTCTTCCCACCGACGCCGCTGCAGACACCGATCCAGACACCGCTTGAAGCTGGGA
TCGATACGGGGCCGTTGGACTATGCCCCATCGCCGATCAGTGCCATGAGAAACGGGATGGGGATGATGAACGGGGCTGAT
CCAGAGACTGGCCGCCCAAGCCCTTTCATGCAACCTCCGTCGCCCTGGATGAATCAGAGACCACTGGGGCTTGATGTCAA
CCTTGCTTTTGCTTATGATGAGGAGATCCGGATGATGATGCAACCCCAGCCACTGACGACCAAGGATTTTCTCATGATGT
CTTGTGGAAAACGGAAGAGGGATGAATATACTTCAGCCGGTTCATTTGTGCCACAACAGGATGGATGTGCAGACCAGGTT
GCGGTTCATTATGATGCAACCCCAGACTACAATACCCCTGGGGAATCTTCGGAATATCAAACTCCCACACCTGCTGTTGC
AACACCAAAGCCAAGAAACGATACAGCGGGTGGTGAAGATGATGATGAACCTCCTCTTAATGAAGATGACGACGAC---G
ATGACGACATAGATGATGACTTTGATGAGACGCAGCACCTTGTCCTCGCACAATTTGACAAGATAACAAGGACAAAGAAT
CGCTGGAAGTGCACTTTGAAGGATGGAATCATGCATTTGAACGGCAGAGATGTTCTATTCAACAAGGCTTCAGGAGAGTT
TGATATTTGAATTTTATTTCATGGTGATTAAAGATGATGTTTTAGGTGCCTGCTGTATCTAC-------TGTCTTTAACA
CAAGGA------AGGGAAGGTGACAAAAGAGTACTGGAGTTGTGGCGAGTTTGGCACTATGATCGTGTCTC-GTGTTTTC
CTGTTGATTGAGGCTTGGTTAA-CCAC---TTGGTCTGCTTACCATAACTCATGTGTCACTGTAAAAATGGTACAGTTGG
TACGATTGTGGACATTTACTTGAGATGGTCACTTAAAGCTGCTGGGACGATCTT--------------------------
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----------------------------------------------------CTGGTGGGACGATCT--TAGCTCATAAA
AATCATCAAGAGAAAAGTAGTGGCTGCAGAGTTGTACGGAGAAAAGGGAAAGAGAGAAGAGACTGC---CTATTCTTAAG
TCGACTGATTTTTATTTGGGGTTAAGTCGAATTTCTGTCATATGATGTGCTTCCACGTGTCTTGTTTTGATTTTTGATGT
TGTCATA-------------------------------------------------------------------------
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----------------------------TGAATCTGAAAGCTGAATGACCAATGATAGACAGAAAGATGACTGAAAACTT
TACAAGAACTGAACACTGAAAAACCTGAAGATAGATAGAGAAGAGGACTGAATAAACGAGACTCAAAGGTGGTCGAGAAA
CATTTACTAAAGACTGAACAAATATGACTTGGAAGGAAATAAATGGAGAAGG-AAAGAGTCAAGAGAGACACCCAGGAAT
AGACTACCAGAATGAGATCAATAGTGTGCAACTATTGCCCAAAACTGAACTGACAACTATCACTGAAACAACTGACATGA
CTAAAGAAACTGAGGAGGACTGAAGAAAGATAACTGAAATAATCCTGAAAAACTGAAGAAGTACACTGAAAACTG-----
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>chr5D_38
-------------------------------------AAGGAGGAATACCCATGATCTCCCGGTCATTGTGTCCTGATGA
TGCAAACAGCCAAATTATTACAGGTTAGTGAAGTGCATGAACAG-AAAAGAAAAGGCTAGTGATTATGAGAAAGAATATG
TCTACAACATCAATGAAAC----CAATGGTTACGGCCAGTTTTGTGTTATTTCATTTTTGTCAACATTTCTTGGCAAAAA
ATGTGAAGAATATTTCTTTAAAAATGCGAATAATTCTTGAAAATTGTGAAGAAATTTGGAAGTCGAAGAAACTTTTAAGA
CATGAACAATTCTTGAGAAATTTGAAAACAAATTTGAGAAACATGAACAAACTTTTGAAATTCCAAA-CATTTATTGAAT
TTTTTATATGCGGTGACATTTTTAAAATATATATCGGAAAATTTGGTAATATGCGCTAAACGTTTTTTAAAATACACATT
GAACTTTTTTGTGATATAGGCTGAACAATATTTAAATACACATTGACCATTTTTGTGATATATGTTAAACATATATTTAA
AACACATTGAAATTTTTGTGATATATGATGAACAA-TTTTAAAATACACAATGAAAATTCTTTTAAATATGTCAAACATT
TTCTTA--ATATAGGGTGAACATTTCCTTAAATATACAATGAACATTTCTGTGTATAACACACAAGGAAATT-GTATAAT
ACAC-GGAA-AAATGATGAAAATATAA--------AAAAACGTAAAATAAAATAAAATAAACAGAAACGGAGAAAAGCAA
AAAAGCAAAAAAAAAAGAAGGAGAAAAGAGAAGAAACAACAGAGCGA-CCATGGGCCGGCCCAAACTAGGGCTTCGGGAG
GCTGAGCTTCAGCGAAGCCACGTACTGCGGTCCGGTCTTCCCTCAAA----TCAGTGGTTTCTTTAGTCCCACATTGCCT
GATGAAGAGAAGGCGTCGGAGAGCTTCGGCTATATAAGAGGCCGCCCCCTCGATCTGCAGGGCCACTCGCCGCCTCCACC
TCCACCTCCCGCGCAATCCCTAACCCTAGCACCGCCAA------------------------CGCCATGGCCAGCGGCAA
CGCGTCCACCGCCTACCTCTCCATCGTTGAGGACGTCGTCACCAAAGTTCGTAAGGACTTTACGAACTCCGGCGTTGGCG
ACGCCGTCCTCAACGAGCTCCAGTCTCTCTGGCAGACGAAGTTGCTGCACTGTGGCGCAATCTCAGGGAACATCGACCGC
AACAGGGCTCCCCCCGCCGGAGCGTCCGCTGGCGGCGCGACTCCACCGGTGCACGATCTCAACGTGCCCTACGAGGCCAC
GTCCGAGGAGTACGCCACCCCAACCGCCGACATGCTCTTCCCACC------------GACCCCGATCCAGACGCCACTTC
CAGCTGGGATTGATACATGGC-----------------------------------------------------------
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------------CGTGGGACTATGCCCCATCGCCGATCGGTGACATAAGAAACGGGATGGG---GATGAATGGGGCTGAT
CCAAAATCTGGCCGCCCAAGCCCCTGCATGCAACCTCCATCGCCCTGGATGAATCAGAGACCACTGGGGCTTGATGTGAA
CCTTGCTTTTGCCTATGAGGACCCAGACCGGATGATGCCACT---------------GACGAAGGATTTTCTGATGACTT
CTTGTGGAAAACGGAAGAGGGATGAATATCCTTCAGCTGCTTCATTTGTGCCACAACAGGATGGATGCGCAGACCAGGTT
GCGGTTCATTATGA---------------------------------------------------------------TGC
AACACCAAAGCCAGGAAACGATACAGCGGGTGGT---GATGATGATGAACCTCCTCTTAATGAAGATGACGACGAC---G
ACGATGATGACATAGATGACTTTGATGACACGCAGCACCTCGTCCTTGCACAGTTCGACAAGATAACAAGGACAAAGAAT
CGCTGGAAGTGCACTCTGAAGGATGGAATCATGCATTTGAACGGCAGAGATGTTCTATTCCACAAGGCTTCAGGAGAGTT
TGATTTTTGAATTTCATTTCATGGTAATTAAAGAGGATATTTTAGGTGCCTGCTGTATCTAC-------TGTCTTTAACA
CAAGGATAAGGAAGGGAAGGTGACAAAAGAGTACTGGAGTTGTGGCGAGTTTGGCACTATGAATGTGTGTCAGTGTTTTC
CTG----TTGAGGCTTGCTTCAC--------------------------TCA--TGTCACTGTAAAAATGGTACAGTTGG
TACGGTTGTGGACATGTTCTTGAGATGGTCACTTAAAGCTGGTGGGACTGAAAGTACCTTTCTACACCTGAGCTCATATG
CTCCTGCTATGAACAGTAAAATAAATAAAATAGAAAAACATTCAAAAAATTCTGAAATTTTTTTGTGACATACTTTAAGA
AATGTTTGTTGTGCATGCAAAATTTCATCACGAAATCACATTGGTGGAGGTCGTGGCAAAAATAACAAAATCAAAGCTCC
AAAATACGTTTGAAAGTAACATTTTCAATCGATTTTGTTCTTTTTACCATGCCTTCCACCAATGTCATTTCATGACGAAA
TTTTGCAAGCACAACAAACATTTCTTAAAGTATGCCACAAAAAAATTTCAGAATTTTTTGAAATGTTTTCCTATTTTATT
TATTTTACTGATCATAGCAGGAGCATATGAGCTCAGGTGTAGAAACTCCACGCTGGTGGGACGATAT--TATCTCATAAA
AATCATCAAGAAACAAGTAGTGGCTGCAGAGTTGTACGGAGAAAAGGGAAAAAGAGAAGGGACTGTCGTCTATTCTTAAC
TCGACTGATTTTTATTTGGGTTTAAGTCTAATTTCTGTCCTATGATGCGCTACCACGTGTCTTGATTTGATTTTTGATTT
TGTCCTAG------------------------------------------------------------------------
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----------------------------TGAATCTGAAAGCTGAATGACCAATGATAGACAGAAAGATGACTGAAAACCT
TACAAGAATTGAACACTGAAAAACCTGAAGATAGATAGAGAGGAGGACTGCATAAACGAGACTCAAAGGTGGTTGAGAAA
CGTTCACTAAAGACTGAAGAAAGATGACTTGAAAGGAAATAAATGGAGAAGG-AAAGAGTCAAGAACGACACCCAGGAAT
AAACTACCAGAGTGAGATCAATAGTGTGCAACTATTGCCCAAAACTGAACTGACAATTATCACTGAAACAACTGACATGA
CCCAAGAAACT---GAGGACTGAAGAAAGATAACTGAAATAATCCTGAAAA-CTGAAGAAGTACACTGAAAACTG-----
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>chr5B_38
-------------------------------------AAGGAGGAATACCCATGATCTCCCGGTCATTGTATCTTGATGA
TGCAAACAACCAAATTATTACAGGTTAGTGAAGTGCATGAAGAG-AAAAGAAAAA-CTAGTGACAATGAGAAAGAATATG
TCTACAACATCAATGAAACTATCCAATGGTGACGGCC------GTTTTATTTCAATTTTGTCAACATTTCTTG--AAAAA
ACGTGAACAATTTTTCTTAAAAATTGCGAATAATGCTTGAAAACTGTGAAGAAACTTTGAAGTCGAACAAAGTTTTAAGA
CGTGAACAATTTTTGAGAAAATTGATTTT---TTTTAGAAACATGAACAAACTTTTGAAATTCCAAA-CATTTATTGAAT
TTTTTATATGTGATGAATTTTCTTAAATATATATT-AAAAAATTGGTAATATACGCTAAACAATTTTTAAAATACACACT
GAACTTTTTTGTTATACAGGCTGAACAATATTTAAATACACATTGAACACTTCTGTGATATATGTTAAAAATATATTTAA
AACACATTGAATTTTTTTATATATATGTTGACCAA-TTTTAAAATAAACAATGAAAATTCTTTTAATTATGTCAAACATT
TTCTCAGTATATAGCATGAACATTTCCTTAAATACACGATGAACATTT-TGTGTATAACACACAAAGACATTTGTATAAT
ACACGGGAA-AAATGATGAAAAGATAA--------AAAAGGAAAAACG----TAAAATAAACAGAAACGGAAAAAAGCAA
AAAAGCAAAAAA---------------GAAAAGAAACAGCAGTGCGACCCATGGGCCGGCCCAAACTGGGGCTTCGGGGG
GCTGAGCTTCA--------------------------------------AATCAGTGGTTCATTTAGTCCCACCTCGCGT
GAGGAAGAGAAGGGATCGGAGAGCCTCGGCTATATAAGAGGCCGCCCCCTCGATCTGCAGGGCCACTCGCCG------CC
TCCACCTCCCGCGCAATCCCTAAACCTAGAACCGCCAACTCCTTTTTCGCTAGAACCGCCAACGCCATGGCCAGCGGCAA
CGCGTCCAGTGCCTACCTCTCTGTCGTCGAGGACGTCGTCTCCAAAGTTCGTAAGGACTTTACGAACTCCGGCGTTGGCG
ACTCCGTCCTCAACGAGCTCCAGGCTCTCTGGGAGACGAAGTTGCTGCACTGTGGCGCAATCTCAGCGAACATCGACCGC
AACAGGGCTCCCCACGCTGGAGCGTCTGCTGGCGGCGCGACTCCACCGGTGCACCATCTCAACGTGCCCTACGAGGCCAC
GTCCGAGGAGTACGCCACCCCAACCGCCGACATGCTCTTCCCACC------------GACCCCGATCCAGACGCCACTAC
CAGAGGGGATTGATACGGGGC-----------------------------------------------------------
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------------CGTGGGACTATGCCCCATCGCCGATCGGTGACATGAGAAACGGCATGGGGATGATGAATGGGGCTGAT
CCAGAGACTGGCCGCCCAAGCCCTTTCATGCAACCTCCATCGCCCTGGATGAATCAGAGACCACTGGGGCTTGATGTGAA
CCTTGCTTTTGCTCATGATGAGGAGATCCGGATGATGATGCAACCCCGGCCACTGACGACTAAGGATTTTCTCATGATGT
CTTCTGGAAAACGGAAGAGGGATGAATATCCTTCTGCTGCCTCATTTGTGCCACAGCAGGATGGATGTGCAGATCAGGTT
GCGGGT--------------------------------------------------------------------------
----------------------------GATGGT---GATGATGATGAACCTCCTCTCAATGAAGATGACGACGAC---G
ATGACGACATTGATGATGACTTTGATGACACGCAGCACCTTGTCCTTGCACAGTTCGACAAGATAACAAGGACAAAGAAT
CGCTGGAAGTGCACTCTGAAGGGTGGAATCATGCATTTGAACGGCAGAGATGTTCTGTTCAGCAAGGCTTCAGGAGAGTT
TGATTTTTGAATTTCATTTCATGG----TAAAGATGATATTTTAGGTGCCTGCTGTATGAAC-------TGTCTTTAACA
CA-----AAGGAAGGGAAGGTGACAAAA--------GAGTTGTGGCGAGTTTGGCACTATGATCATGTCTC-GTGTTTTC
CTG----TTGAGGCTTGCTTCACCCAC---TTGGTTTGTTGACCATAACTCA--TGTCACTGTAAAAATGGCACAGTTGG
TACGATTGTGGACATTTTCTTGAGATGGTCACTTAAAGCTGGTGGGACGATCTT--------------------------
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----------------------------------------------------CTGGTCGGACGATCTTATAGCTCATAAA
AATCATCAAGAAACAAGTAGTCGCTGCAGAGTTGTACAGAGAAAAGGGAAAAAGAGAAGGCACT---GTCTATTCTTAAG
TCGACTGATTTTTCTT----TTTATGTCTAATTTCTGTCCTATGATGTGCTACCACGTGTCTTGATTTGATTTTTGATTT
TGTCCTATCAGCGTGTTTGGCAAAAAATGGGAAAGGGAATGGGAGTTTAATGTAGGGAGTTGTATTGAGATTAGACATGG
GATGAGTCGTTTTATTCCCAATCCTCTGTTTGGCGTATGATGAAAATTATGTGTGAGAGTTTGATGAGAAATTGTATTCC
CGTGTTTGGTTCGTGGGAATTGACAAGGAAATAGACAAGGGAAATTAACATAAGTTATGATGAAGGGCTAAGATTGACTC
ACTAAAACAATTCCCTTCCAACTCCCACCCCCTCCCCTGTTAATAAAACGGTGGGAGTTAGAGTCTCAAGTCCCATGACT
ATTCCCTTATCAATTTCCAATCCCCCTAACCAAACAATAGATTTGAAGTCTCGTACCCCTTCAATTCCCATTCCCTAGCT
CTAACTACCCTCAACCAAACATGCTGTATGAATCTGAAAGCTGAATGACCAATGATAGAAAGAAAGATGACTGAAAACCT
TACAAGAACTGAACACTGAA--ACCTCAAGATAGATAGAGAAGGGGACTGAATAAACGAGACTCAAAGGTGGTTGAGAAA
CATTTACTAAAGACTGAAGAAAGATGACTTGAAAGGAAATAAATGGAGAAGG-AAAGAGT-AAGAACGACACCCAGGAAT
AGACTACCAGAGTGAGATCAATAGTGTGCAACTATTGCCCAAAACTGAACTGACAACTATCACTGAAACAACTGACATGA
CTGAAGCAAAGTG-------------------------------------------------------------------
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>chr5D_1050
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--------------------------------------------------------------CGCCATGGCCAGCGGCAA
CTTG---------TACATCTCCGTGATCGACGACGTCGTCGCCAAGGTTCGTAAGGACTTCGACACCGACGGCGTTGGCG
ATGCCGTCCTCAACGAGCTCCAGGCTCTCTGGGAGACGAAGTTGATGCACTGTGGCGCAATCTCAGGGAACATCGACCGC
AACAGGGCTCCCCCCGCCGGAGCGTCCGCTGGCGGCGCGACTCCACCGGTGCACGACCTCAACGTGCCCTACGAGGCCAC
GTCCGAGGAGTACACCACCCCAACCGCCGACATGCTCTTCCCACCGACGCCGCAGCAGACCCCGATCCAGACGCCACTTC
CAGCTGGGATTGATACGGGGC-----------------------------------------------------------
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------------GGTGGGACTATGCCCCATCGCCGATCGGTGACATGAGAAACGGGATGGGGATGATGAATGGGGCTGAT
CCGGAAACTGGCCGCCCGAGCCCTTTCATGCAACCCCCATCGCCCTGGATGAATCAGAGACCACTGGGGCTTGATGTGAA
CCTTGCTTTTGCTCATGATGAGGAGATCCGGATGATGATGCAACCCCAGCCACTGACGACTAAGGATTTTCTCATGATGT
CTTCTGGAAAACGGAAGAGGGATGAATATCCTTCAGCTGCTTCATTTGTGCCACAACAGGATGGATGTGCAGACCAGGTT
GCGGGT--------------------------------------------------------------------------
----------------------------GGTGTT---GATGATGATGAACCTCCTCTCAATGAAGATGACGACGACGACG
ATGACGACATTGATGATGACTTTGATGACACGCAGCACCTTGTCCTTGCACAGTTTGACAAAATAACAAGGACAAAGAAT
CGCTGGAGGTGCACTTTGAAGGGTGGAATCATGCATCTGAACGGCAGAGATGTTCTATTCAACAAGGCTTCAGGAGAGTT
TGAGTTTTGAATTTCATT-CATGG----CAAAGATGATGTTTTAGGTGCCTGTTGTATGTAC-------TGTCTTTAACA
CAAGGATAAGGAAGGGAAGGTGACAA--GAGTACTGGAGTTGTGGCGAGTTTGGCACTATGAACGTGTGTC-CTGTTTTC
CTGTTGATTGAGGCTTGCTTCACCCACCAGTTGGTTTGTTGACCATAACTCA--TGTCACTGTAAAAA------------
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>SNPs
-----------S-----S--S-------S---------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-S-----------------S-----
--S--------------------------------S--------------------------------------------
---------------------------------------------------------------S---S----S-------
------------------------------------------------------S------------------------S
S----------------------------------------------S-----------S-------------------S
---S--------------------------S----S----------------------------------------SSSS
---S--------------------------------S-----------S-SS-----------------------S----
------------------S----------------------------------------------------------S--
------------S-------------------------------------------------------------------
--------------------------S---------S----------SS-------------------------------
-------S---------------------------------------------S-----------------S--------
S-S----SS------------------------S----------------------------------------------
-----------------------------S---S---------------SSS---SS-----------------------
-------------------S------------------------------------------------------------
--------------S--SSSS---------------------S----S----S---------------------------
------------------------------------------------------------S-------------------
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---------------------------------------------------------------------SS-S-------
--------------------------------S----S-----------------------------------S------
---------------S------------------S---------------------------------------------
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---------------------------------------------S----------------------------------
----------------------------------------------S---------------------------------
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---------------------------------------------------------S----SSSSSSS-----------
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--------------------------------------------------------------------S--SSS------
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-------------------------------------------S--------S----------------S----------
------------------S--S-----------------------------------------------------S----
--------------------------S--------------------------SS-----------------S--SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_928
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----------------------------GGTCCGGTGTTCCCTCAAAT--------------------------------
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>reverse_6940
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-----------------------------------------------------------ATCCAGGAACGCAGGAACTG-
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