>input_sequence_65708
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---ATGG---CCGCCGTGAAGGAGCACGTCCTGCTCAGCCAGCCGGACAAGCAGGTCCTGCTCGCCGAGATCCCGGCTTC
AGGCGCGCGCGAT---------CCGCAGCCGACGGTCACGCTCCGGCTGCTCGTCGAGCTGTGCAACGACTACGGCGCCG
GCCCCGTGGACGTCGACACGATGGAGGACGTGGCCTGCCGCGTGCCGCTCGCCGACCTGGGCCGCCAGGGGGCGGCCGAC
CGGGCGTTCAAGGAGCTGGTGGCCCGGATCGACAACCCGGCGCTGCGCCCGGAGGTCGCCGCGGAGACCGCGGCGGCCGC
GGCGCGCGTCCGGGCGAGGTGCGGGGCCGACGACCGCGACGGGCTCCGCGGCGTGGAGTTCCGCCTCCGCGTCGTGTTCA
TCGACGAC---GCGTCC---------GAGGAGGCGGAGG------------AGGACGACGACGAGTGCGGGAGCGACATG
GAGTTCGGGGAGTTCGATCTGAGCGGCGCGCGGAGCCTGCGCGGCCAGCAGACCGACGCCGG------CTACGGCTACGA
CTACGAGGAGGACGACGACGATGAAGACGGCTGCGGCGCCCAGTTCACTGTGCGCCCGTACCGCGGCGCCC----TCGCG
CGAGCGGGAGGAGGGG---CGCCGTCGTCCCTGCTGCTGTCAGGCTTCGAGGCGCGCTCCGACGGGCCCGAGCTCACGGA
GGAGCACGAGATGACGTCGTACGACATACAGCGCGTCGTGCGCAAGGCGCTGGGCGGCGGCGGCGGCGGGAGCGTGGAGG
ACGACGAGGCCTACCGGCGCGCGCTGGACGGCGGCACGCCCGTGTCGCCGACATCGCGCGCCGCCATGGTCGGCCAGGCG
CTGCAGTCCGCGAGGCAGCAG---CAGCAGCAGCAGCGGTCGAAGTCGCCACGCCCAATCTTCCCGATGCGTACCGGATT
CTGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr4D_1_TraesCS4D01G064100
CATTGCCCTCCCTCTAGACACTCATCTCATTCGTCCCATTTCTCCTTCCTCCATTG---ACCACTGCTGCCATCGAGCTA
CAGCCTCGCTCGCGCGATGCAAAGAGGGGGGAACCAT-------------GGACTCTTTGCCTCCCGCATCGGGGCAGCT
TGTGATGCGGCGGCGACAGCCGGTGGTGGCTACTTGAAAGGAGGGATGCGGAGATCTGTGAGCTTGGTGAGACAGTGTTG
TTGCGAGGCACACAACGACTGCTACGAGGATGACGGCCACCCAATTCATAGGTGTTGCAATTGGGATTTGATGGATTGCA
ATGTCGATGATGCTTCTGAAACATGGTCAGTGTTGCAATGAAAGAGACGAGGGAAACACTGGAGCCGCTTGATGGATTAC
AACGTCCTTAATGTTTCTGAA-ACATAGGCCTTGTTTCAAAGGAAAAAAAAACGGTCCGACGGAGAGCGCAACAGGCTCA
TGTTGCAAAGCGCCAAGCGCAACACGATCCTTGTTGCAAAGGAGGGCGGTGCCGTGGAGAGAT----CAGACCGGACGTG
TAGCGCTTCCCT-AATTATGAGAACACGTTAATACAACCAACGACGAACCAACCAGTGTTTGGATGGTTAGAGGGACTGT
GGTATCCCCAACCCACCAGGGTTCAAGTCCTCTGTTCGTAAATACTTGTTGGA----------------------AAAAT
GAATAAAAATGAACGTATCTATAACTAAAATACATCTAAACATATCTATTTTTTTAACAAGTATTTTCGGACGAG-----
--------------------------------------------------------------------------------
---------------------------------------------------GGAAGTACAACCAATGATGAGCGGCTGGA
TGATTCTCTCCCTTCCTCTGCCGGACTGCAATTCTGATTCGGTATT--------GGGGCTTCACTTCCGAATCGAGCTCA
GCTCTCTCTCGTCTCAATCGCACCTTCCTGCTATAAAAGGAGCACCAGACCCGCAAGTACGTACCGTGCAAACTCGTGAA
GGAACACGTCCACCGCGGCCCTAGACCCTGTTCTTTTCCGCAGCCCGCCCGTGCACCCGCAGGCAGA-------------
--CATGG---CCGCCGTGAAGGAGCACGTCCTGCTCAGCCAGCCGGACAAGCAGGTCCTGCTCGCCGAGATCCCGGCTTC
AGGCGCGCGCGAT---------CCGCAGCCGACGGTCACGCTCCGGCTGCTCGTCGAGCTGTGCAACGACTACGGCGCCG
GCCCCGTGGACGTCGACACGATGGAGGACGTGGCCTGCCGCGTGCCGCTCGCCGACCTGGGCCGCCAGGGGGCGGCCGAC
CGGGCGTTCAAGGAGCTGGTGGCCCGGATCGACAACCCGGCGCTGCGCCCGGAGGTCGCCGCGGAGACCGCGGCGGCCGC
GGCGCGCGTCCGGGCGAGGTGCGGGGCCGACGACCGCGACGGGCTCCGCGGCGTGGAGTTCCGCCTCCGCGTCGTGTTCA
TCGACGAC---GCGTCC---------GAGGAGGCGGAGG------------AGGACGACGACGAGTGCGGGAGCGACATG
GAGTTCGGGGAGTTCGATCTGAGCGGCGCGCGGAGCCTGCGCGGCCAGCAGACCGACGCCGG------CTACGGCTACGA
CTACGAGGAGGACGACGACGATGAAGACGGCTGCGGCGCCCAGTTCACTGTGCGCCCGTACCGCGGCGCCC----TCGCG
CGAGCGGGAGGAGGGG---CGCCGTCGTCCCTGCTGCTGTCAGGCTTCGAGGCGCGCTCCGACGGGCCCGAGCTCACGGA
GGAGCACGAGATGACGTCGTACGACATACAGCGCGTCGTGCGCAAGGCGCTGGGCGGCGGCGGCGGCGGGAGCGTGGAGG
ACGACGAGGCCTACCGGCGCGCGCTGGACGGCGGCACGCCCGTGTCGCCGACATCGCGCGCCGCCATGGTCGGCCAGGCG
CTGCAGTCCGCGAGGCAGCAG---CAGCAGCAGCAGCGGTCGAAGTCGCCACGCCCAATCTTCCCGATGCGTACCGGATT
CTGATGCGCGCCCGATTGGATTGCAAACCTGTGATGTAAATGATGATTGCAAACT-----------CTTGTGTAGTTCGT
GAAGGG------CTGTTGCGATTTGTATGTCTGTA--AACCTATTTTGTAGCCATCCATTGAAGTTCGATTCATTTCTTC
TTGGTAGAAAATATGCAGCTGCATCTTACAATAGCCGAAGTAA------------ATGTTAGTGAAGATGTGTTGATCTC
TTGCGAGACGCATGTGATGATCTTGATCTGTTATCGAAATCATAAGAATTTGTTTACCGTTTTCTCTGATGATGAGGCAA
ATCACTAGAATACACAACTGGCAAGAATGTGATGATG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------ATGTGA
TGGATTGCATTGCATTGCTGAATT-CTCTGCATTGCAGAACTGTTGGGTATACAATTTGTAATGTAATATAAATACATGG
AGGGGATAAATGTGGCATGTCGATGCATGCTTTTGTTAGTTTTGTTGCCTTATACATCATTTCTAAAGTCAGGAAATATC
TGACAAAAACCTATGTCTCAATTTATATACACTTGTCATGAATCAGCCATGCTGTCGCCTTCGGTCGCTGGGCGCAGTTC
TGGTTTCTGTTCTTGTTCCGGACTCCTGATCAAGAAAGTAGAATCCCCACAT---AAAAAAAGGGAAAAAGATCAAGAAA
GTTAAATAATGGTACATAGTTGGTGTTTTGAGAGATCTCTCCTGAGCCATGAGGTTTCCCATTTAAACCCTGACATGAGG
AGCTTTTAAAATATAGCTGCT------------------AGACAGCGATTTGAGATGCAGTAGAGTCTGCAAAGAAGGTG
TGCTTACATCCCAGAGTCCATTTTGACCGTGGTATGATTAGGCTCAGCACAAACAATTGCTTTGTCATCATCCACACTCT
CCTGTGTAGGAAGAAACACAAATAAAGTAAACATGAAATGTTCAAG-CAAATAAGTTATATCATAGAACTAACGCACCAT
TTTACTCAGATTGGCGGGATGCTGCACCGTCATTTTGGGGGCATTCAAAGGACTT
>chr4B_1
CATTGTCCTTCCTCT--ACACTCATCTCATTCGTCCCATTTCTCCTTCCTCCACTGACCACCACTGCTGTCATCGAGCTA
CAGCCTCGGTCGCGCGATGCAAAGAGGGGAGAACCATCGATCTCGCCCGAGGACTCTTTGCCTCCCACATCAGGGCAGCC
TGTGGTTCGGCGGCGACAGCCGGTGGTGG---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ATTAC
AACGCCCTTCATGTTACTGAACACATAGGCCTTGTTTTAAAGGAAAAAA---CGGTTCGGCGGGAGCGCAACAAGGCTCG
TGTTGCGCGCTTT-----GCAACACGAACCTTGTTGCAAAGGAGGGCGCTCCCGTGGAGAGATTGGACTGACCGGACACG
TAGTGCTCCCCAAAATTCTGAGAACACGTTAAGGACATCAACAGTGTGTAGAGGCTGGGCTGCCTCTATCCTGGGCCCCA
CGTTCTGCCTCTAGTCAGATCTAAAAACCACGTGGTGTGTAGCAGGCTGTTGACTCTAAGGAATGGTCCCACAATAGAAT
AAACAATGAAGAATGTATTGATCCGTTTGCATGGCCTAGCCACAGCCATACACTGACTAGTAGGACCATGTCGTTGTTTA
ATCCTTGGAGGCAGCCTCCAAGGCTAGCATCGATGCCAAGCTTAAAAAACTTGGAGGCAATGTCTGCAGTGTGTAGAGGC
GGGCTCCAAGCCTTTAGAGGCGGCTATAGAGGCTGAAAACCACTACCTTGTGGATGCTCAACCAATGATGAACGGGTGGA
TAA---------TTCCTCTGCCGGACTACAATTCCGATTCGGTATT--------GGGGCTTCAGTTCCGAATCGAGCCCG
GCTCTCTCTCGTCTCAATCGCACCTTCCTGCTATAAAAGGAGCCCCAGACCCGCAGACACATACCAAGCAAACTCGTGAA
GGAACACGTCCACCGCGGCCCTAGACCCTTCTCTTCTCCGCAGTCCGCCCGTGTAATCGCAGCAGCTAAGA-----CATG
GCCATGG---CCACCGTGAGGGAGCACGTCCTGCTCAGCCAGCCCGGCAAGCAGGTCCTGCTCGCCGAGATCCCGGCGTC
AGCCTCGCGCGAC---------TCGCAGCCGGCGGTCACGCTCCGGCTGCTCGTTGAGCAGTGCAGCGACTACGGTGCCG
GCCCCGCGGACGTCGACACGGTGGAGGACGTGGCCTGCCGCGTGCCGCTCGCCGACCTGGTTCGCCAGGGGGCGGCGGAG
CGGGCGTTCAAGGAGCTGGTGGCCCGGATCGACAACCCGGCGCTGCGCCCGGAGGTCGCGGCGGAGACCGCGGCGGCCGC
GGTGCGCGTCCGGGCGAGGTGCGGGGCCGACGACCGCGACGGGCTCCGCGGCGTGGAGTTCCGCCTCCGCGTCACGTTCA
TCGACGAC---GCGTCCAGGGAAGAGGAGGAGGCGGACC------------ACGACGACGACGAGTGCGGGAGCGACATG
GAGTTCGGGGAGTTCGATCTGAGCGGCGCGCGGAGCCTGCGCGGCCAGCAGACCGACGCCAG------CTA------CGA
CTACGAGGAGGAGGACGACGACGAGGACGGCTGCGGCGCCCAGTTCACGGTGCGCCCCTACCGCGGCGCCC----TCGCG
C---------GAGGGG---CGCCGTCGTCCATGCTGCTGTCTGGCTTCGAGGCGCGCTCCGACGGGCCCGAGCTCACGGA
GGAGCACGAGGTGACGTCGTACGACATACAGCGCGTCGTGCGCAAGGCGCTG------GGCGGCGGCGGGAGCGTGGAGG
ACGACGAGGCATACCTGCGCGCGCTGGACGGCGGCACGCCCGTGTCGCCGGCGTCGCGCGCCGCCATGGTCGGCCAGGCG
CTGCAGTCCGCGAGGCAGCAG---CAGCAGCAGCAGCGGTCGAAGTCGCCACGCCCAATCTTCCCGATGCGTACCGGATT
CTGATGCGCGCCCGATTGGATTGCAAACTTGTGATGTTACTCTTCT--------------------------------GT
GAAGGGCTAAACCTGTTGCGATTTGTATGTCTGTA--AGCCGATTTTGTAGCCATCCATTGAAGTCCGTTTCATTTCTTC
TTGGTAGAAAATATGCAGCTGCATCTTACCACAGCCGAAGTAA------------ATCAGGAAC----------------
------------------------GATATGCTATCAAAATCATAAGAATTTGTTTCCCC-TTTCTCTGATGATGACACTA
GCAT---------ACATCTGGCAAGAATGTGATGATTTTTTTGACAGTGCTAGAGCAGGCTTACGCCGGCCTGAACCATT
TTCATTTATAAATAAGAGTAAGATACACCACATCAGGTACTCCCTCCGTTCGGAATTACTTGTCTCGGAAATGGATGTAT
CTAGAACTAAAATACATCTAGATACATCCATTTTCGAGACAAGTAATTCTGAACGGAGGGAGTACAAAAGATGGCATCCA
ACACACACAAGAAGGCACAAGGAACAACATAAGGAGAACCAGTAAAGAGCTACGACAAGCAGCCAACACCAAGAATGTGA
TGGATTG-ATTGCATTCCTGAATT-CTCTGCATTGCAGAACTGTTGGGTATACAATGTGTAAATAT-----AATACATGG
AGGGGATAAATGTGGCATGTCGATGCATGCTTGTGTTAGTTTTGTTGCCTTATACATCATTTCTAAAGTCAGGAAATATC
TGACAAAAACCTATGTTTC-ATTTATATACACTTGTCATGAATCAGCCATGGTGTCGCCTTCAGTCGCCGGGCGCAGTTC
TGGTTTCTGTTCTTGTTCCGGACTCCTGGTCAAGAAAGTAGAATCCCCACACACAAAAAAAGGGGCAAAGGATCAAGAAA
GTTAGATAATGGCACATAGTTGGTGTTCTGAGAGATCTCTCATAAGCCATGAGGTTTCCCATTTAAACCCTGACATGAGG
AGTTGAGGACCTTGTAAAATAGTATACTCCTAGCTGCTAAGACAGTGATCTGAGATGCAGTAAAGAAGGCT---------
TGCTTACATCTCAGAATCCATTTTGACTGCGGTATGATTACGCTCAGCACACACAATTGCTTTGTCATCATCCACACTCT
CCTGTGTAGGAAGAAATGCAAATAAACTAAACATGAAATGTTCCAATCAAACAAGTTATATCACAGACCTAACGCACCAT
TTTACTCGGATTGACAGGATGCTGCACGGTCATTTTGGGAGCATTCAAAGGACTT
>chr4A_786
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CTCTCCCTTACTCTGCCGGACTACAATTCTGATTCGGTATGGCCGTATGGGGGCTTCACTTCCGAATCGAGTCCG
GCTCTCTCTCGTCTCAATCGCACCTTCCTGCTATAAAAGGAGCCCCAGACGCGCAAGCACATACCGAGCAAACTCGTGAA
CGAACACCTCCACCGCGGCCCGAGACCCTTCCCTTCTCCGCAGTCCGCCCGTGCAATCGCAGCGACTAGACATGGCCATG
GCCATGG---CCGCCGTGAAGGAGCACGTCCTGCTCAGCCAGCCCGACAAGCAGGTCCTGCTCGCCGAGATCCCGGCCTC
AGGCTCGCGCGAT---------CCGCAGCCGACGGTCACGCTCCGGCTGCTCGTCGAGCTGTGCAGCGACTACGGCGCCG
GCCCCGCGGACGTCGACACGATGGAGGACGTGGCCTGCCGCGTGCCGCTCGCCGACCTGGGCCGCCAGGGAGCGGCCGAC
CGGGCGTTCAAGGCGCTGGTGGCCCGGATCGACAACCCGGCGCTGCGCCCGGAGGTCGCGGCGGAGACCGCGGCGGCCGC
GGCGCGCGTCCGGGCGAGGTGCGTGACCGACGACCGCGACGGGCTCCGCGGCGTCGAGTTCCGCCTCCGCGTCGTGTTCG
TCGACGAC---GCGTCC---------GAGGAGGAGGAGGAGGC---------GGACGACGACGAGTGCGGGAGCGACATG
GAGTTCGGGGAGTTCGACCTGAGCGGCGCGCGGAGCCTACGCGGCCAGCAGACCGACGCCGGCTACGACTA------CGA
CTACGACGAGGACGACGAGGACGAGGACGGCTGCGGCGCCCAGTTCACGGTGCGCCCGTACCGCGGCGCCCCCACGCGAG
G----GGGAGGAGGGGCGCCGTCGTCGTCCCTGCTGCTGTCTGGCTTCGAGGCGCGCTCCGACGGGCCCGAGCTCACGGA
GGAGCACGAGGTGACGTCGTACGACATACAGCGCGTCGTGCGCATGGCGCTG---------GGCGGCGGGAGCGTGGAGG
ACGACGAGGCCTACCGGCGCGCGCTGGACGGCGGCGCGCCCGTGTCGCCGGCGTCGCGCGCCGCCATGGTCGGCCGGGCG
CTGCAGTCCGCGAGGCAGCAG---CAGCAGC------GGTCGAAGTCGCCACGCCCAATCTTCCCGATGCGTACCGGATT
CTGATGCGCGCCCGATTGGATTG---------------------GATTGCAAACCTCTCGACGTTACTCGTGTGGTTCGT
GAAGGGCTAAACCTGCTGCGATTTGTATGTCTGTATAAACCTATTTTGTAGCCATCCATTGAAGTTCGATTCATTTCTTC
TTGGTAGAAAATATGCACCTGCATCTTACCATGGCCGAAGTAAATCAGGAACGATATGTTAGTCAAGATATGTTGATCTC
TTGCAACATGCATGTGATGATGTTGATCTGTTATCAAAATCATAAGAATTTGTTTCCCC-TTTCTCTGGTGATGACACTA
GCAT---------ACATCTGGCAAGAATGTGAAGATTTTTTTGACAGTGCTACGGCGGGCTTACACCGGCGTGAACCATT
TTCA-TTATAAATAAGAGTAAGATACAACACATCAG--------------------------------------------
-------------------------------------------------------------GTACAAAAGATGGCATCCA
ACATACACAAGAAGGCAC---------------------CAGAAAAGAGTTACGACAAGCAGCCAACACCAAGAATGTGA
TGGATTG-ATTGCATTGCTGAATTCCTCTGCATTGCAGAACTGTTGGGTATACAATTTGTAATGTAATATAAATACATGG
AGGGGATAAATGTGGCATGTCGATGCATGCTTTTGTTAGTTTTGTTGCCTTATACATCATTTCTAAAGTCAGGAAATATC
TGACAGAAACCTATGTCTCAATTTATATACACTTGTCAAGAATCAGCCATGCTGTCGCCTTCGGTCGCTGGGCGCAGTTC
TGGTTTCTGTTCTTGTTCCGGACTCCTGATAAAGAAAGTAGAATCCCCACACACAAAAA---GGGAAAAAGATCAAGAAA
GTTAGATAAT---ACATAGTTGGTGTTTTGAGAGACCTCTCCTAAGCCATGAGGTTTCCCATTTAAACCCTGACATGAGG
AGCTTTTAAAATATAGCTGCT------------------AGACAGCGATTTGAGATGCAGTAGAGTCTGCAAAGAAGGTG
TGCTTACATCCCAGAGTCCATTTTGACCGTGGTATGATTAGGCTCAGCACAAACAATTGCTTTGTCATCATCCACACTGT
CCTGTGTAGGAAGAAACACAAATAAAGTAAACATGAAATGTTCAAT-TAAATAAGTTATATCATAGAACTAACGCACCAT
TTTACTCAGATTGGCGGGATGCTGCACCGTCATTTTGGGGGCATTCAAAGGACTT
>chr1B_997
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AGA-------------
--CATGGCCACCGCCGTGAACGAGCACGTCCTGCTCAGCCATCCCGACAAGCTGGTCCTGCTCGCCGAGATCCCGGCCGC
AGACTCGTGCGG------CTCGT----------CGTCACGTTCCGGCTGCTCGTCGAGCAATGCAGCGACTACGGCGGCG
GTCCCGTGGACGTCGACACGATGGAGGACGTGTCCTGCCGCGTGCCGCTCCGCGACCTGGGCCGCCGGGGCGCCGCGGAC
CGGGTGTTCACAGACCTCGTGGCCAGGCTCGACAACCCGATGATACGCCCGGAGGTCGCGATGGAGGCCAGGAGGGCGGC
GGAGCGCGTCGGGGCGAGACGCGGCGCGCT------CGACGAGCTCGGCGGCATGGAGTTCCGCCTCCGCGTGGTGTTCG
TCGACGATGACGCGTCC---------GAGGAGCAGGCAGCGTCGGACG---ACGACGACGATGAGAGCGGGAGCGACATG
GAGTTCGGGGAATTCGACCTGAGCGGCGCGCGGAGCCTGCACGGCGAGCGGGCCGTCGCCGCG-----------------
-TACGAGGACGACGACGATGACGAGGACGGCTGCGGCGCCCAGTTCACGGTGCGCCAGTACCGCGGCGCCC----GCGCG
G----GGGAGGGAGCGAA-----------CCTGCTGCTGTCGGGCTTCGAGGCGCGCTCGGACGGCCCCGAGCTGACCGA
GCAGCACGAGCTGACGTCGCATGACATGCACCGCCTCGTGCACCTGGCGCTG------GAAGGGGGCGCGAGCATGGAGG
ACGACGAGGCCTACCAGCGAGCGCTGGCCGGCGGCACGGCCGTGTCCCGGGCGTCGCGCGCCGCCATGGTCGACCAGGCG
CTGCAGTCCGCGAGCCAGCAG---CAGCAA---------TCCAAGTCACCGAGCCCGATCTTTCCGATGCGTTCCGGATT
CTGATGCCTGCCGGATTG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr1B_997
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AGA-------------
--CATGGCCACCGCCGTGAACGAGCACGTCCTGCTCAGCCATCCCGACAAGCTGGTCCTGCTCGCCGAGATCCCGGCCGC
AGACTCGTGCGG------CTCGT----------CGTCACGTTCCGGCTGCTCGTCGAGCAATGCAGCGACTACGGCGGCG
GTCCCGTGGACGTCGACACGATGGAGGACGTGTCCTGCCGCGTGCCGCTCCGCGACCTGGGCCGCCGGGGCGCCGCGGAC
CGGGTGTTCACAGACCTCGTGGCCAGGCTCGACAACCCGATGATACGCCCGGAGGTCGCGATGGAGGCCAGGAGGGCGGC
GGAGCGCGTCGGGGCGAGACGCGGCGCGCT------CGACGAGCTCGGCGGCATGGAGTTCCGCCTCCGCGTGGTGTTCG
TCGACGATGACGCGTCC---------GAGGAGCAGGCAGCGTCGGACGACGACGACGATGA---GAGCGGGAGCGACATG
GAGTTCGGGGAATTCGACCTGAGCGGCGCGCGGAGCCTGCACGGCGAGCGGGCCGTCGCCGCG-----------------
-TACGAGGACGACGACGATGACGAGGACGGCTGCGGCGCCCAGTTCACGGTGCGCCAGTACCGCGGCGCCC----GCGCG
G----GGGAGGGAGCGAA-----------CCTGCTGCTGTCGGGCTTCGAGGCGCGCTCGGACGGCCCCGAGCTGACCGA
GCAGCACGAGCTGACGTCGCATGACATGCACCGCCTCGTGCACCTGGCGCTG------GAAGGGGGCGCGAGCATGGAGG
ACGACGAGGCCTACCAGCGAGCGCTGGCCGGCGGCACGGCCGTGTCCCGGGCGTCGCGCGCCGCCATGGTCGACCAGGCG
CTGCAGTCCGCGAGCCAGCAG---CAGCAA---------TCCAAGTCACCGAGCCCGATCTTTCCGATGCGTTCCGGATT
CTGATGCCTGCCGGATTG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr1A_1005
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CCGCCGTGAACGAGCACGTCCTGCTCAGCCATCCCGACAAGCTGGTCCTGCTCGCCGAGATCCCGGCCGC
AGACTCGTGCGGCTCGTCCTCGTCGCAGCCCGACGTCACCTTCCGGCTGGTCGTCGAGCAATGCAGCGACTACGGCGGCG
GCCCCGTGGACGTCGACACGATGGAGGACGTCTCCTGCCGCGTGCCGCTCCGCGACCTGGGCCGCCGGGCCGCCGCGGAC
CGGCCGTTCGCGGGCCTCGTGGCCAGGCTCGACAACCCGATGATACGCCCGGAGGTCGCGACGGAGGCCCGGAGGGCCGC
GGAGCGCGTCGGGGCGAGGCGCGGCGCGGCCGG------CGGGCTCGCCGGCGTGGAGTTCCGCCTCCGCGTGGTGTTCG
TCGACGACGGCGCGTCC---------GAGGAGCCGGCGGCGTCGG------ACGAGGACGACGAGAGCGGGAGCGACATG
GAGTTCGGGGAATTCGACCTGAGCGGCGCGCGGAGCCTGCACGGCCAGCGGGCCGTCGCCGCG-----------------
-TAC------GAGGACGACGACGAGGACGGCTGCGGCGCCCAGTTCACGGTGCGCCCGTACCGC-------------GCG
G----GGGAGGGGGCGAG-----------CCTGCTGCTGTCGGGCTTCGAGGCGCGCTCGGACGGCCCCGAGCTGACCGA
GCAGCACGAGCTGACGTCGCATGACATGCGCCGCCTCGTGCACCTGGCGCTG------GAAGGGGGCGCGAGCATGGAGG
AGGACGAGGCCTACCAGCGATCGCTGGCCGGCGGCACGACCGTGTCCCGGGCGTCGCGCGACGCCATGGTCGACCAGGCG
CTGCAGTCCGCGAGCCAGCAGCAGCAGCAGC------GGTCCAAGTCACCGAGCCCGATCTTTCCGATGCGTTCCGGATT
CTGATGCCGGCCGGATTG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr1D_1005
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CCGCCGTGAACGAGCACGTCCTGCTCAGCCAACCCGACAAGCTGGTCCTGCTCGCCGAGATCCCGGCCGC
AGACTCGTGCGG------CTCGTCGCAGCCCGACGTCACGTTCCGGCTGCTCGTCGAGCAATGCAGCGACTACGGCGGCG
GCCCCGTGGACGTCGACACGATGGAGGACGTTTCCTGCCGCGTGCCGCTCCGCGACCTGGGCCGCCGGGGCGCCGCGGAC
CGGGCGTTTGCGGGCCTCGTGGCCAGGCTCAACAACCCGATGCTGCGCCCGGAGGTCGCGACGGAGGCCCGGAGGGCGGC
GGAGCGCG---------------GCGCGCT------CGACGAGCTCGGCGGCGTGGAGTTCCGCCTCCGTGTCGTTTTCG
TCGACGATGACGCGTCC---------GAGGAGCCGGCGGCGTCGG------ACGAGGACGA---GAGCGGGAGCGACATG
GAGTTCGGGGAATTCGACCTGAGCGGCGCGCGGAGCCTGCACGGCCAGCGGGCCGTCGCCGCG-----------------
-T---------ACGAGGAGGACGAGGACGGCTGCGGCGCCCAGTTCATGGTGCGCCCGTACCGC-------------GCG
G----GGGAGGGGGCGAG-----------CCTGCTGCTGTCGAGCTTCGAGGCGCGCTCGGACGGCCCCGAGCTGACCGA
GCAGCACGAGCTGACGTCGCATGACATGCGCCGCCTCGTGCACCTGGCGCTG------GAAGGGGGCGCGAGCATGGAGG
ACGACGAGGCCTACCAGCGAGCGCTGGCCGGCGGCACGGCCGTGTCCTCGGCGTCGCGCGCCGCCATGGTCGACCAGGCG
CTGCAATCCGCGAGCCAC---CAGCAGCAGC------GGTCCAAGTCACCGAGCCCGATCTTTCCGATGCGCTCCGGATT
CTGATGCCTGACGGATTGGA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>SNPs
-----S---S-----SS------------------------------------S---------------S----------
--------S--------------------S------------------------------------S----S-------S
----S-S----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
----S----S-----S---------------------S-----------SSS----S--S---SSSSSSS-SS------S
------SSSSSSSSSSSS---------S--------------------S-S-----------------S--------SS-
---S---S---S-----S--------------SSSS-S----SSS-SSSSS-SSSSS-SS--SS-SSS-SSS---S-SSS
S--SSSS--SSSSSS-SSSSS-SS--SS-SSS--S-SSSS-SS-SSSSS-S-------------------------S---
S--S--SS-S---S----SS--SSS-SSSSSSSSS---SS--S-S-S--SSSS-S-SS-SSSSSSSSSS-S--SS-----
--------------------------------------------------------------------------------
------------------------------------------------------S-SS-------------S---S----
-S-SS----------------------S-------------------------------------------------S-S
-------------------------------------------S-------------S--S-----S-------------
-----------------------------SS----S-------S-----------SS-----SS----------------
--------------------------------------------S--------------------------------S--
----S------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------SSSSSS---
---------------------S--S-----------------------S-------------------------------
-SSSS------------------------------------S--------------------------------------
----------S-----------------------------------------SSSSSS----------------------
--------------------------------------------------S-S---------------------------
--------------------------------------------------------------------------------
----------------------------S--------S-S-SS-----------S-------------S----S------
--------------------------------------------------------------------------------
-----------------------------S---------------------------------S-----S----------
----S-S-S------------S-------------S-------------------S--SS---------------SS-S-
SSSSSSSSSSSSS---S-------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S---------S------------------
----S-------S------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
-------------------------------------------------------
>forward_614
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CAACCAACGACGAACCAACC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_1753
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------GGCTACGA
CTACGAGGAGGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_672
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CCACCAGGGTTCAAGTCCTC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_1757
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ACGA
CTACGAGGAGGACGAC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_965
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TGATGAGCGGCTGGA
TGATT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2229
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TGTGTAGTTCGT
GAAGGGCT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
