>input_sequence_65699
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-----ATGGAGAATCATCTCGCGATCCTGGCGTTGTTTCTTGGCGTGTGCATGTCACAGCTCGGGGGTTCACCGGCCCAG
CAGTACTGGACGCCGGCCAACGCGACGTTCTATGGCGGCGGCGACGCGTCCGGCACAATGGGTACGTAACCGTTCCCTGA
TTCTGCACAGATACTCATTATTCCAGTTTTGCTTCAAAATGAGAGTAAAGGTTATCA-------ACCGAGGCCGAGGATT
TGAATCGGGGAACAAATTCTTAGACAATTGTTGCTTCTTGCATATGCAGGTGGATCGTGCGGTTACGGCAACCTATACGA
CGCCGGGTACGGGACCAACTCGACGGCGCTGAGCGCGACGCTGTACGGCGACGGCAAGTCGTGCGGCGCGTGCTACGTCA
TCACCTGCGACGCCTACC---ACACGCAGTCGTGCAAGCCGGGGACGTCCATCACCGTGACGGCCACCAACTTCTGCCCG
CCCAACTGGTCCCAGCCAAGC---GACAATGGCGGCTGGTGCAACCCGCCGCGGCAGCACTTCGACATGTCCCAGCCCGC
CTGGGAGACCATCGCCGTGTACCAGGCCGGCTTCGTGCCCATCAAGTACGCCAGGACGGCGTGCCCGCGAAGGAACGGCG
GCATCCGCTTCTCCATCACCGGCCATGACTACTTCGATCTGGTCCTCATCAGCAACGTCGGCGGAAGCGGCGCCGTGTCG
GCGGCGTCGGTGAAGGGTTCCAACACAGACTGGATGCCCATGAGCCGCAACTGGGGCTCTAACTGGCAGAGCAACGGCTA
CCTCACCGGCCAGAGCCTGTCGTTCCGGGTGCAGACGGATGACGGCAGGTCCGTCACGGCGTACAACGTGGCGCCGGCAT
ACTGGAAGTTCGGCGACACTTACACGTCTTCCGTCAACTTCTACTAG---------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>chr3B_1_TraesCS3B01G200100
GCCGTGCTTGATGGGGGGCCCGGAAGCCCATTGAGGAGAACGCGCGAAGAGGATCAATTGTTAAGCTGAATGTATCATGC
ATGTGACAGAGAATAGCAGATCGTGTATGAGTATACGGAGATCTTTCATTCTTCTCTTTTCTTTTCTTTTTTTACGGAGG
GAGATCTTTCATTCTTTCTGCATATACTCCCTCCGTCCCAAAATAAGTGTCTCAACTTTGTACTAGCTCTAGTACAAATT
TGTACTAAGCTCAAGACACTTAATTTTAGGATGGGGGAGTATATAAAATGCTGTCCATTTTTGCAATGGTTATAGAAGAA
ATTCTGCAAAAACTAAATTTATTCCAGCAAAGAACTCTCCTTTCTCAAGAGTCATCTGTTGTCCCCGGCAGGCGTGTTTT
TTTTCCTCCATTATTTTCACTCAGGTACTCGATGTAACTCCGGAATCTGCGAGGACCAAT-GGCTACATAAAAATGACAG
GCGTCACGGACTGGTCGAATTTTACGGGATATGGAGAATGC-ATGGGCGCTCTCGTGATCACAAACTCATCACAAGAACT
GGAACTCGCTTCCAAGGAACAACTACCAGGATTAATAATGCCCCTATTTCGTCGATAATGCCCCATCCCAGATATTCACC
ATCCTCTATGCTAATATATTATCGGAAACCATCTTGGATTATTAGTAACCAGCCGCTAGGTGCATAATGCGTCTGCGTGA
TCTGCCATGCCATGCATGACCCACCATTAATCCAGTAAACAA----ATGAGGCCACATGCACTCTACGTAGGAGTAGTAC
ATATGCATGATCAGTGATCCTCGTCAACCATGCATGATCTGTGATCTTCGTCAACCATCGTCCGTTGGCGGGGGGGACGG
AAACAGAACTCCCATCAGCTCGCCG-----------------------------GCCGTTGCCTATACAAGCACCATAGA
ACACACTCTAGGTC-------GC-AACAGAGCTGAAGTTTA--ATCAGAGAACCACCTGCTGAAGCAGAGTTAGTCCTGG
CAAACATGGAGAATCATCTCGCGATCCTGGCGTTGTTTCTTGGCGTGTGCATGTCACAGCTCGGGGGTTCACCGGCCCAG
CAGTACTGGACGCCGGCCAACGCGACGTTCTATGGCGGCGGCGACGCGTCCGGCACAATGGGTACGTAACCGTTCCCTGA
TTCTGCACAGATACTCATTATTCCAGTTTTGCTTCAAAATGAGAGTAAAGGTTATCA-------ACCGAGGCCGAGGATT
TGAATCGGGGAACAAATTCTTAGACAATTGTTGCTTCTTGCATATGCAGGTGGATCGTGCGGTTACGGCAACCTATACGA
CGCCGGGTACGGGACCAACTCGACGGCGCTGAGCGCGACGCTGTACGGCGACGGCAAGTCGTGCGGCGCGTGCTACGTCA
TCACCTGCGACGCCTACC---ACACGCAGTCGTGCAAGCCGGGGACGTCCATCACCGTGACGGCCACCAACTTCTGCCCG
CCCAACTGGTCCCAGCCAAGC---GACAATGGCGGCTGGTGCAACCCGCCGCGGCAGCACTTCGACATGTCCCAGCCCGC
CTGGGAGACCATCGCCGTGTACCAGGCCGGCTTCGTGCCCATCAAGTACGCCAGGACGGCGTGCCCGCGAAGGAACGGCG
GCATCCGCTTCTCCATCACCGGCCATGACTACTTCGATCTGGTCCTCATCAGCAACGTCGGCGGAAGCGGCGCCGTGTCG
GCGGCGTCGGTGAAGGGTTCCAACACAGACTGGATGCCCATGAGCCGCAACTGGGGCTCTAACTGGCAGAGCAACGGCTA
CCTCACCGGCCAGAGCCTGTCGTTCCGGGTGCAGACGGATGACGGCAGGTCCGTCACGGCGTACAACGTGGCGCCGGCAT
ACTGGAAGTTCGGCGACACTTACACGTCTTCCGTCAACTTCTACTAGTCGACCATATGCGCGCTAGCCTTGTACACTAGT
CCAGACATCTGCTGTCGCTAGTGCACGTCCACGTACTGTTTGTAGCTTGTAAGTTATTTTTTATGTGAATTTAATTTAAT
TTTTTTTACAAATTATAAACACTGTCAATACATCTCTTATTTGTTCTCTTTTCTTCGCATCAACCAAATTATTATGTGGT
ATCTGTATCACTTACAAATTGGTGATATGGTCTTGAAACACAGCAGGGCGATGTCTCATCGCACACAAACTTTCAACCAC
CGCCACACCACCTTAGGCACCTCCTCTCTCCTCAACATCCGCTCCCCTTGCTCATCCCCGCATGTAATTAAATTAAATTA
AATTTTGAATCGCGT----------------GAAGAATATCTACAGATGATAGGGGTCCTCCTGATTGGGGGTGCGACGA
GATTGGGGCGGCGTGGGCCAACCC-TACATCTTAGTCCAGCCAGTTACGACTCGAAGAGATGC--TGACAGGAAGCGCAG
ATCCAGG----TCTGGAGGAGGAGAGGTGGGCGCACCATCCGGGATTCACGCTGCAACCGGAGCTTGTTTGCCGCTACCC
TCTCGCCCCATTGGTGGAGATCACAACGAGGGAAGCGGGTGTAATTGTGCAGCAGTGGA----------AATGGGTCGCG
GAGCAGATCATCGTGTAGAACTCAGTGTTGACTTGCGTGGCTAGAAATGTAGGAGAGGACCGACATTGCAGCAGTAGTTC
GCGAGAGGTTCCGTCGGCATCAGGTGGCAGAAATATGGACAAACTCCATTCTTTGATGACGGAGCGCAA--TTCAGGAAA
TGAGGTCTCTGCTCGTCCTGCCACCTTCACAAATCAAGCCGATCAGTGGGGTCGTGGGGTTGCTGGAGAAGCTGCT----
--TGAGGATTCGGGTGATGGGAAGCCGAGGAACTGCCGCACAAG-------------CCGACCGCCGGTGAATGGTGTCT
TTTTTTACCGCGGCACAACCACCGTTGTGGTGGCAGATTCTGATGGTCAAATATGCTATGA
>chr3D_279
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------GTATATAGAACGCTATCCATTTTTGCAATGGTTGTAGAAGAA
ATTCTGCAAACACTGAATTTATTCCAGCAAAGAACTCTCCTTTCTCAAGAGTAATCTGTTGTCCCCGGCAGGCGTG--TT
TTTTCCTCCATTATTTTCACTCAGGTACTCGATGTAACTCCGGAATCTGCCAGGACCAATCGGCTACATAAAAATGACAG
GCGTCACGGACTAGCCGAATTTTAC--GATATGGAGAATGC-ACGAGCGCTTTCGTGATCACAAACATATCACAAGAATT
GAAACTCGCTTCCAAGGAACAACTACATG-------------------GATTA-ATAATGCCCCATCCCAGATATTCACC
ATCCTCTATGCTAATATATTTTCGGAAACCATCTTGGATTATTAGTCACCAGCTGCTAGGTGCATAATGCGTCTGTGTGA
TCTGCCATGCCATGCATGACCCACGATTAATCCAATAAACAAAGAGATGAAGCCACATGCACTCTACGTAC------TAC
ATATGCATGATCAGTGATCCTCGTCAACCATGCATGATCTGTGATCTTCGTCAACCATCGTCCGTTGGCGCGAGGGACGG
AAACAGAGCTCCCATCAGCTCGCCG-----------------------------GCCGTCGCCCATATAAGCATCATGGA
ACACACGCTAGGCTTCAGTATGC-AACAGAGCTGAAGTTTA--ATCAGAGAA------------GCAGAGTTGGTCCTTG
CGAACATGGAGAATCATCTCGCGATCCTGGCGTTGTTCCTGGGCTTGTGCATGTCACAGCTCGGGGGTTCGGCGGCCCAG
CAGTACTGGACGCCGGCCAACGCGACGTTTTATGGCGGCGGCGACGCGTCCGGCACAATGGGTACGTAACCGTTTCCTGA
TAC------------------TCGAGTTTTGCTGCAAATTA--AGTAAAGGTTATCACTTATCAACCTATGCCGAGGATT
TGCGTCGGGGGACGATTTCTTAGATATC---TGCTTCTTGCATATGCAGGTGGATCGTGCGGTTACGGCAACCTGTACGA
CGCCGGGTACGGGACCAGCTCGACGGCGCTGAGCACGACGCTGTACGGCGACGGCAAGTCGTGCGGCGCGTGCTACGTCA
TCACCTGCGACGCCTACC---ACACGCAGTCGTGCAAGCCGGGGACGTCCATCACCGTCACGGCCACCAACTTCTGCCCG
CCCAACTGGTCGCAGCCAAGC---GACAACGGCGGCTGGTGCAACCCGCCGCGGCAGCACTTCGACATGTCCCAGCCCGC
CTGGGAGACCATCGCCGACTACCAGGCCGGCTTCGTGCCCATCAAGTACGCCAGGACGGCGTGCCCGCGGAGGAACGGCG
GCATCCGCTTCTCCATCACCGGCCATGACTACTTCGATCTGGTCCTCATCAGCAACGTCGGCGGAAGCGGCGCCGTGTCG
GCGGCGTGGGTGAAGGGCTCCAACACGGACTGGCTGCCCATGAGCCGCAACTGGGGCTCTAACTGGCAGAGCAACGGCTA
CCTCACCGGCCAGAGCCTGTCGTTCCAGGTGCAGACGGACGACGGCAGGTCCGTCACGGCGTACAACGTGGCGCCGGCAT
ACTGGAAGTTCGGCGACACTTACACGTCTTCCGTCAACTTCTACTAGCCGAGCATATGCGCGCTAGCCTTGTACACTAGT
CCAGACATCTGCCGTCGCTAGTGCACGTCCACATATTGTTTGTAGCTTGTAAGTTATTTTTTATGTGAATTTAATTTTAA
AA-TTTTACAAATTACACACACCGTCAATACATCTCTTATTCTTTCTCTTTTCTTCACATCAACCAAATTCTTATGTGAT
ATCCGCATCACTTACAAATAGCTGATGTGGCCTTGAAACACACCAGGGCGATGTCTCATCCCACACAAACTTTCAACCAC
CGCCACACCACCTTAGGCACCTCCTCTCTCCTCAACATCCGCTCCCCTCGCTCATCCCAGCATAGATGCTAAGAGGAAAC
AGATGGTGGAGGAAACAAAGTTGAATCTGGCAAAGGATATCTACAGATGATAGGGGTCCTCCAGATCGAGGGTGCGACGA
GATTGGGGCGGCATGGGCCAACCCCTACATCTCAATCCAGCCAGTTGCGACTCGAAGAGATGCGCTGACGGGAAGTGCAT
ATCCAGGAGGATCTGGAGGAGGAGAGGTGGGCGCACCGTGCACAATTCACGCTGCAACCCGAGCTTGTTTGCTGCTACCC
TCTTGCCCCATGGGTGGAGATCACAACGAGGGAAGTGGATGCGATTATGCAGCTGCGGAAATGGGTCTGAATGGGTCACG
AAGCAGATCAACATGTAGAACTCAGTGTTGACTTGTGTGGCTAGAAATGTAGGAGAGGACCGACATTGCAGCAGCAGTTC
ACGAGAGGTTCTGTTGGCATCAGGTGGCCGAGATATGGATAGACTACATTCTTTGAAGACGAAGTGCAATATCCAGGAAC
TGAGGTCTCTGCTCGTCCCGCCACCTTCACAAATCATGCAGATGATTGGGGTCGTGGGGTTGCTGGATTCTGGAGAAGCT
ACTGCGTATTCGGGTGGTGGGAAGCCGAGGAACTACCTCACAAGCTGTTGCGACGCCCCGACCGCCGATGAATGGTGTCT
TTG---ACCATGGCACGACGAACATTGTAGTGGTTGATTCTAATGGTCAAATAAGCTATGA
>chr3A_435
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TAACTCCCGAATCTGCAAGGACCAATCGGCTACATAAAAATGACAG
GCGTCACGGACTGGCCAAATTTTAC--GAGATATGGAGAATTACGGGCGCTCTCGTGATCACAAACTCATCACAAGAACT
GAAACTCGCTTCTAAGGAACAACTACAAGAACACAGTTGGGCACACTCGATTA-ATAATGCCTCATCCCAGATATTCACC
ATCCTCTATGCTAGTATATTATCGGAAATCATGTTGGATTATTAGTCACCAGCTGCTAGGTGCATAATACGTCTGCGTGA
TCTGTCATGCCATGCATGACCCACGATTAATCCAGTAAACAAA----TGAGGCCACATGCACTCTACG---------TAC
ATATGCATGATCAGTGATCCTCGTCAACCATGCATGATCTGTGATCTTCGTCAACCATCGTCCGTTGGCGGGAGGGGACG
GAAAGAGTTGAAGTTTAATATCAGAGAAGCAGAGTTGGTCCTGGCGAGCATGGAGCCGTCGCCTATATAAGCACCATGGA
ACACACTGTAGGCTTCGGTATGCAAACAGAGTTGAAGTTTAATATCAGAGAA------------GCAGAGTTGGTCCTGG
CGAACATGGAGAATCATCTCGCGATCCTGGCGTTGTTTCTGGGCGTGTGCATGTCACAGCTCGGGGGTTCAGCGGCTCAG
CAGTACTGGACGCCGGCCAACGCGACGTTCTATGGCGGCGGCGACGCGTCCGGCACAATGGGTACGTAACCGTTTCCTCA
TTC------------------TCCAGTTTTGCTGCA----------------------------ACCTAGGCCGAGGATT
TGCGTCGGGGAACGATTTCTTAGATATC---TGCTTCTTGCATATGCAGGTGGATCCTGCGGTTACGGCAACCTGTACGA
CGCCGGGTATGGGACCAGCTCGACGGCGCTGAGCACGACGCTGTACGGCGACGGCAGGTCGTGCGGCGCTTGCTACGTCA
TCACCTGCGACGCCTACC---ACACGCAGTCGTGCAAGCCGGGGACGTCCATCACCGTCACGGCCACCAACTTCTGCCCG
CCCAACTGGTCGCAGCCAAGC---GACGACGGCGGCTGGTGCAACCCGCCGCGGCAGCACTTCGACATGTCCCAGCCCGC
CTGGGAGACCATCGCCGTCTACCAGGCCGGCTTCGTGCCCATCAAGTACGCCAGGACGGCGTGCCCGCGGAGGAACGGCG
GCATCCGCTTCTCCATCACCGGCCATGACTACTTCGATCTGGTCCTCATCAGCAACGTCGGCGGAAGCGGCGCCGTGTCG
GCGGCGTGGGTGAAGGGCTCCAACACGGACTGGCTGCCCATGAGCCGCAACTGGGGCTCTAACTGGCAGAGCAACGGCTA
CCTCACCGGCCAGAGCCTGTCGTTCCAGGTGCAGACGGACGATGGCAGGTCCGTCACGGCGTACAACGTGGCGCCGGCAT
ACTGGAAGTTCGGCGACACTTACACGTCTTCCGTTAACTTCTACTAGCCGAGCATATGCGCGCTAGCCTTTTACACTAGT
CCAGACATCTGCCGTCGCTAGTGCACGTCCACATATTGTTCGTAGCTTGTAAGTTATTTTTTATGTGAATTTAAT-TTAA
AA-TTTTACAAATTACACACACTGTCAATACATCTCTTATTCTTTCTCTTTTCTTCACATCAACCAAATTCTTATGTGGT
ATCTATATCACTTACAAATAGCTGATGTGGCCTTGAAAAACAGTAGGGCGATGTCTCATCCCACACAAACTTTCAACTAC
CGCCACACCACCTTAGGCACCTCCTCTGTCCTCAACATCCGCTCCCCTCGCTCATCCCTGCATGGATGCTAAGGCGAAAC
AGGTGGTGGAGGAAACAAATTTGAATCTGGCGAAGGATATGTACAGATGATAGGGGTCCTCCTGATCGAGGGTGCGACGA
GATCGGGGTGGCATGGGCCAACCCCTACATCTCAATCCAACCAGTTGCGACTCGAAGAGATGCGCTGAAGGGAAGTGCAA
ATCCAGGAGGATCTGGAGGAGGAGAGGCGGGCGCACCGTGCGCGATTCACGCTGCAACCCGAGCTTGTTTGCTGCTACCC
TCTCGCCCCATGGATGGAGATCACAACGAGGGAAGTGGATGTGATTGTGCAGCTGTAGAAATGGGTCTGAATGGGTCGTG
GAGCAGATCAGCATGTAGAACTCAGTGTTGACTTGCGTGGCTAGAAATGTAGGAAAGGACCGACATTGTAGCAGCAGTTC
ACGAGAGGTTCTGTAGGCATCAGGTGGCCGAGATATGGACATACTCCATTCTTTGAAGACTAAGTGCAATATTCAGGAAC
TGGGGTCTCTGCTCGTCCCGCCACCTTCACAAATCACGCAGATGACTGGGGCCGTGGGGTTGTTGGAGAAGCCGCT----
--TGCATATTCGGGTGGTGGGAAGCC-------TACCTCACAAGCTG--------------CCGTCGGTGAATGGTGTCT
TTG---ACCACGGCACAACCAACATTGTGGTGGTTGATTCTAATGGTCAAATAAGCTATGA
>chr3A_1270
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-----------------------------------------ATATGCAGGTCGTGCGTGCGGGTACGGAAACTTGTACAA
CGCCGGGTACGGGGTCAATTCAGCCGCGTTGAGCACGGCGCTCTTCAACAACGGCGCATCGTGCGGCATGTGCTTCACCA
TCACCTGCGACGCAAGCAAG---ACGCCGTCGTGCAAACAGGGCACGTCCATCACCATCACGGCAACCAACTTCTGCCCG
CCCAACTACGCCCTGGCCAGC---GACAACGGCGGATGGTGCAACCCGCCGCGGCAGCACTTCGACATGTCGCAGCCCGT
GTGGGAGACCATCGCCGTCTATCAAGCCGGCATTGTGCCCGTCAACTAC---AGGAGGGTTCCCTGCCAAAGGAGTGGGG
GCATGAGGTTCACCATCAACGGGAACGACTACTTTGAGCTCGTGACGGTGGCAAATGTCGGCGGTAGCGGCGTGGTGTCC
CAAATGTGGATCAAGGGGTCCAAAACTGACTGGATGGTAATGAGCAGGAACTGGGGTGCTAGCTGGCAGAGCAATGCCTA
CCTCAACGGCCAGAGTATATCCTTCAGGGTACAGACCGACGACGGACGGGTCATCACGGCCGACAATGTTGCGCCGTACA
ACTGGTGGTTCGGTGGCACCTACAC-------------------------------------------------------
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>chr3B_1272
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-------------------------------------------ATGCAGGTGGTGCGTGCGGGTACGGGAACTTGTACAA
TGCTGGGTACGGGGTTAATTCAGCCGCGTTGAGCACGACGCTCTTCAACAACGGCGCATCATGCGGCATGTGCTTCACTA
TCACCTGCGACGCTAGCAAG---ACGCAGTCGTGCAAACAGGGCACGTCCATCACCATCACGGCCACCAACTTCTGCCCG
CCCAACTACGCCCTGGCCAGC---GACAACGGCGGATGGTGCAACCCGCCGCGGCAGCACTTCGACATGTCGCAACCCGC
GTGGGAGACCATCGCTGTCTACCAAGCCGGCATTGTGCCCGTCAACTAC---AGGAGAGTTCCCTGCCAGAGGAGTGGGG
GCATGAGGTTCACCATTAACGGGAACGACTACTTTGAGCTCGTGACGGTGGCAAATGTCGCCGGTAGCGGCGTGGTGTCC
CAAATGTGGATAAAGGGGTCCAAGACTGACTGGATGGTAATGAGCAGGAACTGGGGTGCCAGCTGGCAGAGCAATGCTTA
CCTCAACGGCCAGAGCTTGTCCTTCAAGGTACAGACCGACGACGGCCGGGTCGTCACGGCCGACAATGTTGCGCCATACA
ACTGGTGGTTCGGTGGCACCTACACTTC----------------------------------------------------
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>chr3D_1272
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-------------------------------------------ATGCAGGTGGTGCGTGCGGGTACGGGAACTTGTACAA
TGCCGGGTACGGGGTTAATTCGGCTGCGTTGAGCACGGCGCTCTTCAACAACGGCGCGTCGTGCGGCATGTGCTTCACAA
TCACCTGCGATGCTAGCAAG---ACGCAGTCGTGCAAACAGGGCACGTCCATCACCATCACGGCCACCAACTTCTGCCCG
CCCAACTACGCCCTGGCCAGC---GACAACGGCGGATGGTGCAACCCGCCGCGGCAACACTTCGACATGTCGCAACCCGC
GTGGGAGACCATCGCCGTCTACCAAGCCGGCATTGTGCCCGTCAACTAC---AGGAGGGTTCCCTGCCAGAGGAATGGGG
GCATGAGGTTCACCGTTAACGGGAACGACTACTTTGAGCTCGTGACGGTGGCAAATGTCGGCGGTAGCGGCGTGGTGTCC
CAAATGTGGATAAAGGGGTCCAAGACTGACTGGATGGTAATGAGCAGGAACTGGGGTGCCAGCTGGCAGAGCAATGCTTA
CCTCAACGGCCAGAGCCTTTCCTTCAAGGTACAGACCGACGACGGCCGGGTCGTCACGGCCGACAATGTTGCGCCGTACA
ACTGGTGGTTTGGTGGCACCTACACTTC----------------------------------------------------
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>chr2B_1273
--------------------------------------------------------------------------------
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--------------------------------------------TGCAGGTGGGGCATGCGGGTACGGGAACCTGTACTC
GACGGGGTACGGCACGAGCACGGCGGCGCTGAGCACGGCGCTGTTCAACGACGGCGCCTCCTGCGGGCAGTGCTACCGGA
TCAGGTGCGACTACGCGGCGGACCCGCGGTTCTGCATCCGCGGCGCGTCGGTGACCATCACGGCCACCAACCTCTGCCCG
CCCAACTACGCGCTCCCCAAC---GACGATGGCGGGTGGTGCAACCCGCCGCGGCAGCACTTCGACATGGCCGAGCCGGC
CTGGCTCAACATCGGCGTCTACCGCGGCGGCATCGTGCCGGTCCTCTAC---CAGCGCGTGCCCTGCGCCAAGAAGGGCG
GCGTCAGGTTCACCGTCAACGGCCACGACTACTTCGAGCTCGTGCTCGTCAGCAACGTCGGCGGCGTCGGGTCCATCCGG
TCGGTGTCCATCAAGGGGTCCAGGACGGGGTGGATGCCCATGTCCAGGAACTGGGGGGTCAACTGGCAGTCCAACGCGCT
GCTCACCGGCCAGAGCCTCTCGTTCCAGGT--------------------------------------------------
--------------------------------------------------------------------------------
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>chr3B_1286
--------------------------------------------------------------------------------
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---------------------------------------------------------TGCGGGTACGGCAACCTGTACGG
CGCGGGGTACGGCACGCAGACGACGGCGCTGAGCACCGCCCTCTTCAACAACGGCGCGTCCTGCGGGGCGTGCTTCACGA
TCGCGTGCGACACGCGCAAG---TCGCGGATGTGCAAGCCGGGGACCTCCATCACCGTCACGGCCACCAACTTCTGCCCG
CCCAACTACGCGCTCGCCGGC---GACAACGGCGGCTGGTGCAACCCGCCGCGGCAGCACTTCGACATGGCCCAGCCGGC
GTGGGAAACCATCGCTGTGTACAAGGCCGGCATCGTCCCCGTCAACTAC---AGGAGGGTGCGCTGCCAGCGGAGCGGCG
GGATCAGGTTCACCATCAACGGGCACAGCTACTTCGAGCTGGTGCTGGTGACCAACGTGGGCGGCAGCGGTGGCGTGGCG
CAGATGTGGATCAAGGGCTCCCGCACCAACTGGATGGAGATGAGCCGGAACTGGGGCGCAAACTGGCAGAGCAACGCCAA
GCTCGACGGGCAGAGCCTCTCGTTCCGCGTCAAATCCGACGACGGCCGCGTCGTCACGGCCAACGACGTCGCGCCGCCCG
GGTGGTGGTTCGGCGGCACGTACACGTC----------------------------------------------------
--------------------------------------------------------------------------------
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>chr3D_1286
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---------------------------------------------------------TGCGGGTACGGCAACCTGTACGG
CGCGGGGTACGGCACGCAGACGACGGCGCTGAGCACCGCCCTCTTCAACAACGGCGCGTCGTGCGGGGCGTGCTTCACGA
TCGCGTGCGACACGCGCAAG---TCGCGGATGTGCAAGCCGGGGGCCTCCATCACCGTCACGGCCACCAACTTCTGCCCG
CCCAACTACGCGCTCGCCGGC---GACAACGGCGGCTGGTGCAACCCGCCGCGGCAGCACTTCGACATGGCCCAGCCGGC
ATGGGAGACCATCGCCGTCTACAAGGCCGGCATCGTCCCCGTCAACTAC---AGGAGGGTGCGCTGCCAGCGGAGCGGCG
GGATCAGGTTCACCATCAACGGCCACAGCTACTTCGAGCTGGTGCTGGTGACCAACGTGGGCGGCAGCGGCGGCGTGGCG
CAGATGTGGATCAAGGGCTCCCGCACCAACTGGATGGAGATGAGCCGGAACTGGGGCGCGAACTGGCAGAGCAACGCCAA
GCTCGACGGGCAGAGCCTCTCGTTCCGCCTCAAATCCGACGACGGCCGCGTCGTCACGGCCAACGACGTCGCGCCGGCCG
GGTGGTGGTTCGGCGGCACGTACACGTC----------------------------------------------------
--------------------------------------------------------------------------------
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>chr3A_1286
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---------------------------------------------------------TGCGGGTACGGCAACCTGTACGG
CGCGGGGTACGGCACGCGGACGACGGCGCTGAGCACCGCCCTGTTCAACAACGGCGCGTCGTGCGGGGCGTGCTTCACGA
TCGCGTGCGACACGCGCAAG---TCGCGGATGTGCAAGCCGGGGGCCTCCATCACCGTCACGGCCACCAACTTCTGCCCG
CCCAACTACGCGCTCGCCGGCGGCGACAACGGCGGCTGGTGCAACCCGCCGCGGCAGCACTTCGACATGGCCCAGCCGGC
GTGGGAGACCATCGCCGTCTACAAGGCCGGCATCGTCCCCGTCAACTAC---AGGAGGGTGCGCTGCCAGCGGAGCGGCG
GGATCAGGTTCACCATCAACGGCCACAGCTACTTCGAGCTGGTGCTGGTGACCAACGTGGGCGGCAGCGGCGGCGTGGCG
CAGATGTGGATCAAGGGCTCCCGCACCAACTGGATGGAGATGAGCCGGAACTGGGGCGCAAACTGGCAGAGCAACGCCAA
CCTCGACGGCCAGAGCCTCTCGTTCCGCGTCAAATCCGACGACGGCCGCGTCGTCACGGCCAACGACGTCGCGCCGCCCG
GGTGGTGGTTCGGCGGCACGTACACGTC----------------------------------------------------
--------------------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--S---S------------------S--------
----------S---S-------------------------------------S-----------------------SS--
--------------------------------------------------S-----------------------------
--------------S----------SS----------------S------------------------------------
-S------------------------S--S-SSS-SSSS-S-S-SS-SSSS-SS--------------------------
----------------------------------------------S------S--------------------------
------------------------S---------------------------------------------SSSSSSS---
------------------------------------------------------------------------S-------
-------S---------------------------------------------------S-------S---------S--
------------SS--------------------------------------SSSSSSSSSSSS--------S-------
-S--------------------------------------S------------------------------S--------
--------------------------------------------------------------------------S-----
---SSSSSSSSSSSSSSSSSS------------S----S-SSS------------------------S------------
--SS---------S-S--------S-SSSSS-------------------------------------------S-----
----------------------------------S---------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------S-----------------------------------------------------
---------------------------------------S----------------------------------------
-----------------------------------------------S---S----------------------------
------------S-------------------S--S-----------------------------------------S-S
SSS------------S-S-----------------------SS-------------S-------------S---------
-------------------S-S----S---S-----------------------------S-------------------
------------------------------------------------S---------S-----S-SSSS--SSSS-SSS
-SS-SSSSSSS-SSS--------------------S------------------------------S-S-----------
------------S-------------------S-S-----------S----------------------S-----S---S
-------------------------------------S-S--S----------------S------------S-------
-----------S-----------------------S--S---S----------S--------------------------
----------S-S-------------------------------------------------------------S-----
S----------S--S-------------S--S---------S--------------S----S--S--------------S
------------------S-----------------S--S---S-S--------------------------S-------
----S-S---------S-----------------S--S------------------------------------------
--SSSS---S-----------S-S---------SS------S-----------S-------
>forward_60
----------------------------------------CGCGCGAAGAGGATCAATTG--------------------
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>reverse_1968
--------------------------------------------------------------------------------
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-----------------------------------------------TCGACCATATGCGCGCTAG--------------
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