>input_sequence_65689
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------------------------------------ATGAGGTGGTGGATCATGTTCCGCAA------------------
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----CGTCGACGGGCTCACCGTGACCGGCGACGGGACCATCGACGGCAACGGCGAGACGTGGTGGAAGAGCTCGTGCCGG
GTGGACAAGAAGCTCAAGTGCGCCAACGCCCCGATGGCGCTGCTGCTCAGCAGGTGCAACAACCTCACGGTGGAGAACAT
CCAGCTACTCAACAGCCAGCAGATCCACATGTCGGTCGAGGACTGCCAGGACGTGCTCCTAAAGGGCATCACCATCACCG
CCCCCGGCGACAGCCCCATGAACGACGGCATCCACATTGCGCGCACCAAGGACATCCAGGTCCTGGATTGCGACATTAAA
ACAGGGGACGACTGCATGTCCATCGAGACCGGAACCGAAAACCTCTACGCTTCGAGGATAACCTGTGGCCCGGGACACGG
GATCAGCATCGGGAGCTTAGGCGACGACAACTCCGAGGCTCGAGTCTCTAACATAACAGTCTACAAGGCGCACCTCTCCG
GCACGACCAACGGCGTGCGCATGAAGTCGTGGCAGGGAGGAAAAGGGTACGCCAAGGACGTCACGTTCGAGGACATAACC
ATGGAGGAGGTCCATAACCCCATAATCATCGACCAGAACTACTGCACATCGGTCGATCCCGCCAACCCTAAGCCGTGCAA
GAAACAAACTTCGGCGGTGGAGTTCAGCAACATTCGGTTCAAGAACATAAGGGGCACGAGCGCGACGAAAGAGGCTATCA
AGCTGGACTGCAGCGACACCGTCCCATGCCGCGATATATTGTTGCAAGACGTGAAGCTTACTTTTCATGACCGTGGGCAC
AACCACAAGCACGCTTCTGCAACAAGTGTATGCAACAACGCCAAGCTAACCGAATCTGGCACCAACGTAGATCCCAAGCC
CTGCTGA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr1B_1_TraesCS1B01G083700
GCTAAACATCTATTTTTTTAACACAGTACATAAGCAGACGCTTATACATACACACATACACTTACGTCTATAAACACATG
CACACACAACCTACCTCTATGAGCACGTTCAAAACAGTGAGCCGGCACATCATTTTGAGATTGATAAAATCGACATAGAC
ACATTCGTAGTACAAAACGGTGAAGCCACGTATGGCCACGCAACATAGGTAGTTCTGAACGACGAGGTAAACATAACTAG
GCAACAAAACGGAAAAATAAACTACAAGTTCTTCTGAACGAGCAGAGCCTCCTCCTGAATAGAAGCAAGACAACATAGCC
TAGCTAGCTGCTTACCAAATCCAACGTAGCTAGCTTTGGTTGTATCACGCGCGCGAGCACAAATCGCAACACATAGCCGA
TACATGGCCGCCTTCCGCCGTGCGCTGGTAGTGTTGGCGACAGTTCTGATCCTCGTGCTGTTATTGCTCCTCCTGGTGCC
GGCCATTGCTCACGCAGACAGCATCGCCACCGCCGCCGCCGGCGGTAGACGTACCACCAGCAAC---GACGACGTTCGCC
CCAACCTAAGGCGGAAGAAGATCATGCCTGATCAGACCAGCAAGCTCGACCTACG-------CAGCTACCACCACAGAGC
GGCAGCTGCTGCCGGGCGCCACCGCAAGCTACTCGAGCCCTCTCCCGGGCCTTCTCCCGCACCTTCTCCGGGG-------
-----------------------------CCTTCTCCCGCGCCCTCTCCCGAGCCTTCTTCTC-----------------
-------AGAGTGGTGAAAGCGCCGT------CGAGGTCGACGTGGCGAGCTACGGAGCCGTCGGTGACGGCCAACAGGA
CGACACGCCGGCGTTCCGGGAAGCATGGGCCGCCGCTTGCTCCTCGCCTCAGCCGGCCACCCTCGTGGTCCCCAGGGAGA
AGACGTACCTCGTGAAGCAGACCACCTTCTCGGGCAAGTGCAAGTCCCCCGTCACCTTCAGGCTCGACGGCAAGCTGGTG
GCGCCCGCCAGCCGATCGGCGTGGCCCGAGGAGAACATGAGGTGGTGGATCATGTTCCGCAA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CGTCGACGGGCTCACCGTGACCGGCGACGGGACCATCGACGGCAACGGCGAGACGTGGTGGAAGAGCTCGTGCCGG
GTGGACAAGAAGCTCAAGTGCGCCAACGCCCCGATGGCGCTGCTGCTCAGCAGGTGCAACAACCTCACGGTGGAGAACAT
CCAGCTACTCAACAGCCAGCAGATCCACATGTCGGTCGAGGACTGCCAGGACGTGCTCCTAAAGGGCATCACCATCACCG
CCCCCGGCGACAGCCCCATGAACGACGGCATCCACATTGCGCGCACCAAGGACATCCAGGTCCTGGATTGCGACATTAAA
ACAGGGGACGACTGCATGTCCATCGAGACCGGAACCGAAAACCTCTACGCTTCGAGGATAACCTGTGGCCCGGGACACGG
GATCAGCATCGGGAGCTTAGGCGACGACAACTCCGAGGCTCGAGTCTCTAACATAACAGTCTACAAGGCGCACCTCTCCG
GCACGACCAACGGCGTGCGCATGAAGTCGTGGCAGGGAGGAAAAGGGTACGCCAAGGACGTCACGTTCGAGGACATAACC
ATGGAGGAGGTCCATAACCCCATAATCATCGACCAGAACTACTGCACATCGGTCGATCCCGCCAACCCTAAGCCGTGCAA
GAAACAAACTTCGGCGGTGGAGTTCAGCAACATTCGGTTCAAGAACATAAGGGGCACGAGCGCGACGAAAGAGGCTATCA
AGCTGGACTGCAGCGACACCGTCCCATGCCGCGATATATTGTTGCAAGACGTGAAGCTTACTTTTCATGACCGTGGGCAC
AACCACAAGCACGCTTCTGCAACAAGTGTATGCAACAACGCCAAGCTAACCGAATCTGGCACCAACGTAGATCCCAAGCC
CTGCTGAG---------------------ACAACAAC------AACACATGCATGGTTGTTGTACATACAACCCTTAATT
TTT-GTGCGTGCAATGTACATAGTATAATCTTGTGGATAT--GGATTCGACATTTATATACTGCAAATATTAGTATCTGT
ACCAATCATACACCTTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGT
CATTTATTCGATTACCTTCTGAGAACTGCATTCGTAAGGCGTACAACTAATTTCCTGGATAAACAAGATACTGAGTTGAT
CAAAGATTTGATGCGTGGGTGGTGTGAATTTCTTCGGAGGTCATGATCCCTATGTTCATGAGGTCATTGCCCGGTGACTC
GGTTCGTAGCACTCTTGATCTTTGTTGTGGACTTGTGGTTGCTAGTGACAACTTTTGGTATAGTGCTTCAGTCCATCGAG
CTTAGAGCATCTCTAGCCGCGTCCCCAACAGGCCATCCCCAGGTGTTTTTGTGGAAATATGCCCTAGAGGCAATAATAAA
ATGGTTATTATTATATTTCCTTGTTCATGATAATTGTCTATTGTTCATGCTATAATTGTATTAACCGGAAACCATAATAC
ATGTGTGAATACATAGAGCACAACATGTCCCTAGTGAGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTC-ATGGT
TTCCCGATCATGGACATTAGATATCATTGATAACCGGATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCC
TAAGTATAGCACAAGATCGTGTAGTTCGTTTGCTAAAAGCTTTTCTAATGTCAAGTATCATTTCCTTAGACCATGAGATT
GTGCAACTCCCGGATACCGTAGGAATGCTTTAGGTGTACCAAACGTCACAA-GTAACTGGGTGGCTATAAAGGTACACTA
CAAGTATCTCCGAAAGTGTCTGTTGGGTTGGCACGAATCAAGACTGGGATTTGTCACTCCGTATGACGAAGAGGTATCTC
TGGGCCCACTCGGTAATGCATCATCATAATGAGCTCAATGTGACTAAGTAGTTAGTCAC
>chr1D_415
--------------------------------------------------------------------------------
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--------------CCGCCGTGCGCTGGTAGTGCTGGCGACGGTTCTGATCCTCGTGTTGTTACTGCTCCTCCTGGTGCC
GGCCATTGCTCATGCAGACAGCAT---CGCCGCCGCCGGCGGCGGTAGACGTACCACCAGCAAC---A---ACGTCCGCC
CCAACCTACGACGGAAGAAGATCATGCCTGATCAGACCATCGAGCTCGACCTACG-------CGGCTACCACAGA-----
-GCAGCTGCTGCCGGGCGCCACCGCAAGCTACTCGAGCC------------------------TTCTCCCGGG-------
-----------------------------CCTTCTCCCGCGCCTTCTCCCGAGCCTCCT---CCTGCGCCGTCTCCCGAG
CCTTCTCAGAGTG---AAAACGCCGTCGAGGTCGAGGTCGACGTGGCGAGCTACGGAGCCGTCGGCGACGGCCAACAGGA
CGATACACCGGCATTCCGGGAAGCATGGGCCGCCGCTTGCGCCTCGCCTCAGCCGGCCACCCTCGTGGTCCCCAGGGAGA
AGACGTACCTCATGAAGCAGACCACCTTCTCGGGCAAGTGCAAGTCCCCCGTCACCTTCAGGCTGGACGGCACGCTGGTG
GCGCCCGCCAGCCGGTCGGCATGGCCCGAGGAGAACATGAGGTGGTGGATCATGTTCCGCAA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CGTCGACGGGCTCACCGTGACCGGCGACGGGACCATCGACGGCAACGGCGAGACGTGGTGGAAGAGCTCGTGCCGG
GTGGACAAGAAGCTCAAGTGCAGCAACGCCCCCATGGCGCTGCTGCTCAGCAGGTGCAACAACCTCACGGTGGAGAACAT
CCGGCTCCTCAACAGCCAGCAGATCCACATGTCGGTCGAGGACTGCCGGGACGTGCTCCTCAAGGGCATCACCATCACCG
CCCCCGGCGACAGCCCCATGAACGACGGCATCCACATTGCGCGCACCAAGGACATCCAGGTCCTAGATTGCGACATTAAA
ACAGGGGACGACTGCATGTCCATCGAGACCGGAACCGAAAACCTCTACGCTTCAAGGATAACATGTGGCCCGGGACACGG
GATCAGCATCGGGAGCTTAGGCAACGACAACTCCGAGGCCCGAGTCTCAAACATAACAATCTACAAGGCGCACCTCTCCG
GCACGACCAACGGCGCGCGCATGAAGTCGTGGCAGGGAGGAAAAGGGTACGCCAAGGACGTCACGTTCGAGGACATAACC
ATGGAGGAGGTCCATAACCCCATAATCATTGACCAGAACTACTGCACATCGGCCGATCCCGCCAACCCTAAGCCCTGCAA
GAAACAAACTTCGGCGGTGGAGTTCAGCAACATTCGGTTCAAGAACATAAGGGGCACGAGTGCGACGAAAGAGGCTATCA
AGCTGGACTGCAGCGACACCGTCCCATGCCGCGATATATTGTTGCAAGACGTGAAGCTTACCTTTCGTGACCGTGGGCAC
AAGCACAAGCACACTTCCGCAACAAGTGTATGCAACAACGCCAAGCTAACCGAATCTGGCACCAATGTAGATCCCAAGAC
CTGCTGAG---------------------ATAACAACAGCAACAACACATGCATGGTTGTTGTACGTACAACCCTTAATT
TTTTATATATGCAAAGTAAATAGTATAATCTTGTGGATATATGGATTCAACAGTTATATACTGCAAATATTAGTATGTGT
GCAAATCATACACCG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------TGTGT
CATTTATATGATTACCTTCTGAGAACTGAATTTGTAAGGCATATAATTAATTTCCTGGATAAACAAGATACTGAGTTGAT
CAAAGATTTGATGCGTGGGTGGTGTGAATTTCTTCGGAGGTCATCATCCCTATGTTCATGAGGTCATTGCAAGGTGACTT
GGTTTTGACCAATCTTGATCTTTGTTGTGG--------TTGCCAGTGACAACTTTTGGTATGGTGCTTCAGTCCATCAAG
CTTA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr1D_415
--------------------------------------------------------------------------------
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--------------CCGCCGTGCGTTGGTAGTGCTGGCGGCAGTTCTGATCCTCGGGCTGCTATTGCTCCTCCTGGTGCC
GGCCATTGCTCACGCAGACAGCATCGCCGCCGC------------TAGACGTACCACCAGCAACAACG---ACGTCCGCC
CCAACCTAAGGCGGAAGAAGCTCATGCCTGATCAGAGCATCAAGCTCGACCTACG-------CAGCTACCACAGA-----
-GCACCTGCTGCCGGGCGTCACCGCAAGCTACTCGAGCC------------------------TTCTCCGGGG-------
-----------------------------CCTTCTCCCGCGCCTTCTCCCGAGCCTTCT---C-----------------
-------AGAGCG---AAAACGACGT------CGAGGTCGACGTGGCGAGCTACGGAGCCGTCGGCGACGGCCAACAGGA
CGACACGCCGGCGTTCCGGGAAGCATGGGCCGCCGCTTGCGCCTCGCCTCAGCCGGCCACCCTCGTGGTCCCCAGGGAGA
AGACGTACCTCGTGAAGCAGACCACCTTCTCGGGCAAGTGCAGGTCCCCCGTCACCTTCAGGCTGGACGGCACGCTGGTG
GCGCCCGCCAGCCGGTCGGCATGGCCCGAGGAGAACATGAGGTGGTGGATCATGTTCCGCAA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CGTCGATGGGCTCACCGTGACCGGCGACGGGACCATCGACGGCAACGGCGAGACGTGGTGGAAGAGCTCGTGCCGT
GTGGACAAGAAGCTCAAGTGCGGCAACGCCCCCATGGCGCTGCTGCTCAGCAGGTGCAACAACCTCACGGTGGAGAACAT
CCAGCTCCTCAACAGCCAGCAGATCCACATGTCGGTCGAGGACTGCCGGGACGTGCTCCTCAAGGGCATCACCATCACCG
CCCCCGGCGACAGCCCCATGAACGACGGGATCCACATTGCTCGCACCAAGGACATCCAGGTCCTGGATTGCGACATTAAA
ACAGGGGACGACTGCATGTCCATCGAGACCGGAACCGAAAACCTCTACGCTTCGAGAATAACCTGTGGCCCGGGACACGG
GATCAGCATCGGGAGCTTAGGCGACGACAACTCCGAGGCCCGAGTCTCCAACGTAACAGTCTACAAGGCGCACCTCTCCG
GCACGACCAACGGCGTGCGCATGAAGTCATGGCAGGGAGGAAAAGGGTACGCCACGGACGTCACGTTCGAGGACATAACC
ATGGAGGATGTCCATAACCCCATAATCATCGACCAGAACTACTGCACATCGGTCGATCCCGCCAACCCTAAGTCGTGCAA
GAAACAAACTTCGGCAGTGGAGTTCAGCAACATTCGGTTCAAGGACATAAGGGGCACGAGCGCGACGAAAGAGGCTATCA
AGCTGGACTGCAGCGACACCGTCCCGTGCCGCGATATATTGTTGCAAGATGTGAAGCTTACTTTTCATGACCGTGGGCAC
AAGCACAAGCACGCTTCCGCAACAAGTGTATGCAACAAC-CCAAGCTAACCGAATCTGGCATCAATGTAGATCCCAAGAC
CTGTTGATAAAACAACAACAACAACAACAACAACAAC------AACACATACATGGTTGTTGTATGTACAACCCATAATT
TTTTGTACGTGCAAAGTAAATAGTATAATCTTGTGGATAT--GGATTTGACATTTATATACTGCAAATATTAGTATCTGT
ACAAATCATACACCTTGTGTCCAGTGGCGGAGCTTCATGGGGGCCAACCTGGCCATGGCCCCCCAAGCTCACAAGAAAAC
ATGTATATACTCCTTTGTATTAAGCCTATTTTTCATTAAAACTCAGCTAAAATAGTTANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCTCTAGCCCATGCCCCCCCTCATAATTTCGGCTCAAGCTCCGCCACTGCTTGTGT
CGTTTATATGATTACCTTCTGAGAACTCAGTTTGTAAGGCGTACAATTAATTTTCTGGGTAAACAAGATACCGAGTTGAT
CAAAGATTTTATGCGTGAGTGGTGTGAATTTTTTCGGAGGTCATGATCCCTATGTTCATGAGGTCATTGCCCGGTGACTC
GGTTCTGAGCACTCTTGATCTTTGTTGTGG--------TTGCTAGTGACAACTTTTGGTACGGTGATTCAGTCCATCAAG
CTTA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr1A_415
--------------------------------------------------------------------------------
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--------------CCGCCGTGCGCTGGTAGTGCTGGCGGCAGTTCTCATCCTCGGGCTGCTATTGCTCCTCCTCGTGCC
GGCCATTGCTCACGCAGACAGCATCGCCGCCGCCGCCGCCGGCGGTAGACGTACCAGCAGCAAC---G---ACGTTCGTC
CCAACCTAAGACGGAAGAAGCTCATGCCTACTCAGACC------CTCGACCTACGCGGCTACCGGCTACCACAGA-----
-GCAGTTGCTGCCGGGCGCCACCGCAAGCTACTCGAGCC------------------------TTCTCCCGGGCCTTCTC
CCGAGCCTTCCCCGGCGCCCTCTCCCGCACCTTCTCCCGCGCCTTCTCCCGAGCCTTCT---C-----------------
-------AGAGTGGTGAAAGCGCCGTCGC---CGAGGTCGACGTGGCGAGCTACGGAGCCGTCGGCGACGGCCAACACGA
CGACACGCCGGCGTTCCGGGAAGCATGGGCCGCGGTTTGCTCCTCGCCTCAGCCGGCCACCCTCGTGGTCCCCAGGGAGA
AGACATACCTCGTGAAGCAGACCACCTTCTCGGGCAAGTGCAGGTCCCCGGTCACCTTCAGGCTGGACGGCAAGCTGGTG
GCGCCCGCCAGCCGGTCGGCATGGCCCGAGGAGAACATGAGGTGGTGGATCATGTTCCGCAATATTGAATTTATGCACCA
GCCAACTCATCCAAAAGTCCGAACTGATGGAGAGAGATGGGCAATATATTTCAACACTCCCCCTCATGTCTAGGCGACGT
GGGATCGATGTAGGCCGCAGAATCGTTTTTATTTAATACTGCGTTGGCAGGGTCTTGAACTCAAGACCTCTTGGCTCGGA
TACCATATTGAATTCATGCACCAGCCAACTCATCCAAAAATCCGAACTGATGGAGAGAGATGGGCAATATATTTCAACAC
GCAACGTCGACGGGCTCACCGTGACCGGCGACGGGACCATCGACGGCAACGGCGAGGCGTGGTGGAAGACCTCTTGCCGG
GTGGACAAGAAGCTCAAGTGCAGCAACGCCCCGATGGCGCTGCTGCTCAGCAGGTGTAACAACCTCACGGTGGAGAACAT
CCGGCTCCTCAACAGCCAGCAGATCCACATGTCGGTCGAGGACTGCCAGGACGTGCTCCTCAAGGGCATCACCATCACCG
CCCCCGGCGACAGCCCCATGAACGACGGGATCCACATTGCTCGCACCAAGGACATCCAGGTCCTGGATTGCGACATTAAA
ACAGGGGACGACTGCATGTCCATCGAGACCGGAACCGAAAACCTCTACGCTTCGAGGATAACCTGTGGCCCGGGACACGG
GATCAGCATCGGGAGCTTAGGCGGCGACAACTCGGAGGCCCGAGTCTCCAACATAACAATCTACAAGGCGCACCTCTCCG
GCACGACCAACGGCGCGCGCATGAAGTCGTGGCAGGGAGGAAAAGGGTAGGCCAAGGACGTCACCTTCGAGGACATAACC
ATGGAGGAGGTCCATAACCCCATAATCATCGACCAGAACTACTGCACATCGGCGGATCCCGCCAACCCTAAGCCGTGCAA
GAAACAAACTTCGGCGGTGGAGTTCAGCAACATTCGGTTCAAGAACATACGGGGCACCAGCGCGACGAAAGAAGCTATCA
AGCTGGACTGCAGCGACACCGTCCCATGCCGCGATATATTGTTGCAAGACGTGAAGCTTACATTTCATGACCGTGGGCAC
AAGCACATGCACGCTTCCGCGACAAGTGTATGCAACAATGCCAAGCTAACCGAATCTGGCACCAATGTAGATCCCAAGAC
CTGCTGAG---------------------ACAACAACAACAACAACAACAACAACAA-----------------------
-----------CAAAGTAAATAGTATAATCTTGTGGATAT--GGATTTGACATTTATGTACTGCAAATATTCGTATCTAT
ACAAATCATACACCT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TGTGT
CATTTATATGATCACCTTATGAGAACTGAGTTTGTAAGGCGTACAACTAATTTCCTGGATAAACAAGATACTGAGTTGAT
CAAAGATTTGATGCGTGGGTGGTGTGAATTTCTTCGGGGGTCATGATCCCTATGTTCATGAGGCAATCGCCCGGTGACTC
GGTTTTGAGCACTCTTGATCTTTGTTGTGG--------TTTCCAGTGACAACTTTTGGTATGGTGCTTCAGTCCATCGAG
CTTA----------------------------------------------------------------------------
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-----------------------------------------------------------
>chr2D_2330
CCCGGTGTGTGT--------------------------------------------------------------------
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---------------------------------------------------TGGAAATATGCCCTAGAGGCAATAATAAA
ATGGTTATTATTGTATTTGCTTGTTCATGATAATTGTCTATTGTTCATGCTATAATTGTATTAACTGGAAACCGTAATAC
ATGTGTGAATACATAGACCACAACATGTCCCTAGTAAGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTT-ATGGT
TTCCTGATCATGGACATTGGATGTCATTGATAACGGGATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCC
TAAGCATAGCACAAGATCGTGTAGTTCGTTTGCTAAGAGCTTTTCTAATGTCAAGTATCGTTTCCTTAGACCATGAGATT
GTGCAACTCCCGGATACCGTAGGAATGCTTTGGGTGTACCAAACATCACAACGTAACTGGGTGGCTATAAAGGTACACTA
CAGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACGAATCGAGACTGGGATTTGTCACTCCGTGTGACGGAGAGGTATCTC
TGGGCCCACTCGGTAATGCATCATCATAATGAGCTCAATGTGACTAAGTAGTTAGTCAC
>chr2B_2337
GTTTT----TGT--------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------TGGAAATATGCCCTAGAGGCAAAAATAAA
ATGGTTATTATTGTATTTCCTTGTTCATGATAATTGTCTATTGTTCATGCTATAATTGTATTAACTGGAAACCGTAATAC
ATGTGTGAATACATAGACCACAACATGTCCCTAGTGAGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTT-ATGGT
TTCCTGACCATGGACATTGGATGTCATTGATAACAGGATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCC
TAAGCATAGCACAAGATCGTGTAGTTCGTTTGCTAACAGCTTTTCTAATGTCAAGTATCATTTCCTTAGACCATGAGATT
GTGCAACTCCCGGATACCATAGGAATGCTTTGGGTGTACCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTA
CAGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACGAATCAAGACTGGGATTTGTCACTCCGTATGACGGAGAGGTATCTC
TGGGCCCACTCGGTAATGCATCATCATAATGAGCTCAATGTGACTAAGTAGTTAGTCAC
>chr4D_2341
TTGTTG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------GAAATATGCCCTAGAGGCAATAATAAA
ATGGTTATTATTATATTTCCTTGTTCATGATAATTGTCTATTGTTCATGCTATAATTGTATTAACTGGAAACCGTAATAC
ATGTGTGAATACATAGACCACAACATGTCCCTAGTAAGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTT-ATGGT
TTCCTGACCATGGACATTGGATGTCATTGATAACGGGATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCC
TAAGCATAGCACAAGATCGTGTAGTTCGTTTGCTAAGAGCTTTTCTAATGTCAAGTATCATTTCCTTAGACCATGAGATT
GTGCAACTCCCGGATACCGTAGGAATGCTTTGGGTGTACCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTA
CAGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACAAATCGAGACTGGGATTTGTCACTCCGTATGACGGAGAGGTATCTC
TGGGCCCACTCGGTAATGCATCATCATAATGAGCTCAATGTGACTAAGTAGTTAGTCAC
>chr7D_2341
TTGTTG--------------------------------------------------------------------------
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-----------------------------------------------------GAAATATGCCCTAGAGGCAATAATAAA
ATGGTTATTATTATATTTCCTTGTTCATGATAATTGTCCATTGTTCATGCTATAATTGTATTAACTGGAAATCGTAATAC
ATGTGTGAATACATAGACCACAACATGTCCCTAGTGAGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTT-ATGGT
TTCCTGACCATGGACATTGGATGTCATTGATAACGGGATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCC
TAAGCATAGCACAAGATCGTGTAGTTCGTTTGCTAAGAGCTTTTCTAATGTCAAGTATCATTTCCTTAGACCATGAGATT
GTGCAACTCTCGGATACCGTAGGAATGCTTTGGGTGTACCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTACACTA
CAAGTATCTCCGAAAGTGTCTGTTGGGTTGGCACGAATCGAGACTGGGATTTGTCACTCCGTATGACG--GAGGTATCTC
TGGGCCCACTCGGTAATGCATCATCATAATGAGCTCAATGTGACTAAGTAGTTAGTCAC
>chr6B_2341
TTGTTG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------GAAATATGCCCTAGAGGCAATAATAAA
ATGGTTATTATTATATTTCCTTGTTCATAATAATTGTCTATTGTTCATGCTATAATTGTATTAACTGGAAACCGTAATAC
ATGTGTGAATACATAGACCACAACATGTCCCTAGTGAGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGG-T-ATGGT
TTCCTGACCATGGACATTGGATGTCATTGATAACGGGATCACATCATTAGGAGAATAATGTGATGGACAAGACCCAATCC
TAAGCATAGCACAAGATCGTGTAGTTCATTTGCTAAAAGCTTTTCTAATGTCAAGTATCATTTCCTTAGACCATGAGATT
GTGCAACTCCCGGATACCGTAGGAATGCTTTGGGTGTACCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTA
CAGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACGAATCGAGACTGGGATTTGTCACTCCGTATGACGGAGAGGTATCTC
TGGGCCCACTCGGTAATGCATCATCATAATGAGCTCAATGTGACTAAGTAGTTAGTCAC
>chr1D_2344
--------------------------------------------------------------------------------
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---------------------------------------------------TGGAAATATGCCCTAGAGGCAATAATAAA
ATGGTTATTATTGTATTTCCTTGTTCATGATAATTGTCTATTGTTCATGCTATAATTGTATTAACTGGAAACCGTAATAC
ATGTGTGAATACATAGACCACAACATGTCCCTAGTGAGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGG-TTATGGT
TTCCTGACCATGGACATTAGATGTCATTGATAACGGGATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCC
TAAGCATAGCACAAGATCGTGTAGTTCGTTTGCTAGAAGCTTTTCAAATGTCAAGTATCATTTCCTTAGACCATGAGATT
GTGCAACTCCCGGATACCGTAGGAATGCTTTGGGTGTACCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTA
CAGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACGAATCGAGACTGGGATTTGTCACTCCGTATGACGGAGAGGTATCTC
TGGGCCCACTCGGTAATGCATCATCATAATGAGCTCAATGTGACTAAGTAGTTAGTCAC
>chr5D_2344
--------------------------------------------------------------------------------
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---------------------------------------------------TGGAAATATGCCCTAGAGGCAATAATAAA
ATGGTTATTATTATATTTCCTTGTTCATGATAATTGTCTATTGTTCATGCTATAATTGTATTAACTGGAAACCGTAATAC
ATGTGTGAATACATAGACCACAACATGTCCCTAGTAAGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGG-TTATGGT
TTCCTGACCATGGACATTGGATGTCATTGATAACGGGATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCC
TAAGCATAGCACAAGATCGTGTAGTTCGTTTGCTAAGAGCTTTTCTAATGTCAAGTATCATTTCCTTAGACCATGAGATT
GTGCAACTCCCGGATACCGTAGGAATGCTTTGGGTGTACCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTACACTA
CAGGTATCTCCGAAAGTGTCTGTTGTGTTGGCACGAATCGAGACTGGGATTTGTCACTCCGTATGACGGAGAGGTATCTC
TGGGCCCACTCGGTAATGCATCATCATAATGAGCTCAATGTGACTAAGTAGTTAGTCAC
>chr2D_2344
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---------------------------------------------------TGGAAATATGCCCTAGAGGCAATAATAAA
ATGGTTATTATTGTATTTCCTTGTTCATGATAATTGTCTATTGTTCATGCTATAATTGTATTAACTGGAAACCGTAATAC
ATGTGTGAATACATAGACCACAACATGTCCCTAGTGAGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGG-TTATGGT
TTCCTGACCATGGACATTGGATGTCATTGATAACGGGATCACATCATTGGGAGAATGATGTGATGGACAAGACCCAATCC
TAAGCATAGCACAAGATCGTGTAGTTCGTTTGCT-AGAGCTTTTCTAATGTCAAGTATCATTTCCTTAGACCATGAGATT
GTGCAACTCCCGGATACCGTAGGAATGCTTTGGGTGTACCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTACACTA
CAGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACGAATCGAGACTGGGATTTGTCACTCCGTATGACGAAGAGGTATCTC
TGGGCCCACTCGGTAATGCATCATCATAATGAGCTCAATGTGACTAAGTAGTTAGTCAC
>chr2D_2344
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---------------------------------------------------TGGAAATATGCCCTAGAGGCAATAATAAA
ATGGTTATTATTATATTTCCTTGTTCATGATAATTGGCTATTGTTCATGCTATAATTGTATTAACTGGAAACCGTAATAC
ATGTGTGAATACATAGACCACAACATGTCCCTAGTAAGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGG-TTATGGT
TTCCTGACCATGGACATTAGATGTCATTGATAACGGGATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCC
TAAGCATAGCACAAGATCGTGTAGTTCGTTTGCTAAGAGCTTTTCTAATGTCAAGTATCATTTCCTTAGACCATGAGATT
GTGCAACTCCCGGATACCGTAGGAATGCTTTGGGTGTACCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTACACTA
CAGGTATCTCCGAAAGTGTCTGTTGGGTTGGTACGAATCGAGACTGGGATTTGTCACTCCGTATGACGGAGAGGTATCTC
TGGGCCCACTCGGTAATGCATCATCATAATGAGCTCAATGTGACTAAGTAGTTAGTCAC
>SNPs
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-------------------S----------------------------------------------
----------------------------S---------------------------------------SSS---------
---------------------------------------S--------------------------------SSSSSSSS
S--------------------------------------SSSSSSSSSSSSSSSSSSSSSSSS-----------------
-------------------------------------------S---------------SSS------------------
-----------------------------------------------------------------S--------------
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--------------S-----S-----------------------------------------------------------
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----------------------S---------------------------------------------------------
------S-----------------------------------------------------S-------------------
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---------------------------------------S--------S-------------------------------
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--S--------------S-----------------------------------------------S------------S-
-----------------------------------------------------------------S--------------
------S-------S---S-------------------------------------------------------------
--S-------------S---------------------------------------------------------------
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-------SS-------------------S---S-----------------------------------------------
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-----SS-----------------------SSSSSSSS-----------------------S------------------
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------
-----------------------------------------------------------------S-------S------
-----------------S-------------------------------------------------------S------
----S-----------------S-----------S---------------------------------------------
----S---------------------------------------------------------------------------
-------------------------------S------------------------------------------------
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>forward_125
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-------------------------CGTTCAAAACAGTGAGCCGG-----------------------------------
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>reverse_1527
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------ACTCAACAGCCAGCAGATCC------------------------------------------------------
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>forward_393
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-----------------------------------------------------CGAGCACAAATCGCAACACA-------
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>reverse_3182
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-------------------------------------------------------------AGTGCTTCAGTCCATCGAG
C-------------------------------------------------------------------------------
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