>input_sequence_65684
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--------------------------------------------------------------------------ATGGGG
CTCCTCGACCAGCTCTGGGACGAGACGGTCGCCGGCCCCAGGCCGGACCACGGCCTCGGCAGGCTCCGCAAGTACTCCTC
CTTCTCGCCCTCGA------CCGCGGCGGCCACGGACGTCGCGCCGGCGGTGACCCGCAGCATCACCATCGCCCGGCCGC
CATCTCTCTCGGTGCCATCTGGCGAATCAAGCTCCTTGCCGCCGTCCCCGGCCAGCGCGCCGGACTCCCCGTTCGCAGCA
GGTGGGCCTCCTCCTCTGTTTCTTGGGCT----CTCCCGGTGATTTCCGTTCGGTCT----------TCTGTGACT----
--CTGTGTAG------TGCTGATCGACCGTGATCGCTTCTGTTCGATCGG-----CGATGCGTCGCT-------------
-------------------------------------------------TTGTCCCTCGAGCGCGATGCAGCCACAGAAT
CAGATCCGTGACCA---CTGT---CGCAGACGCACAGATGTCGGGAAATTTGCTGTTTAACCTG--AAATTCCTCTCATT
AAATTGATGTTTTATCTGA-TCTTTAT-----------------------------------------------------
---GTTGCAGCTACCAGTAGGAG---------GGACGGCTGGAGGGCGTTCAGGCGGAAATCCAAGATGGCCAACGTCGA
CGTCGTCCGGCCTGAGACGGCCGTCGGGCCCAGAAGCCCCACCGTGTACGACTGGTGCG-TTTAAACGTCGCCCTCGCAC
TCACTCCATGCTCCTTGCACCATACC-----AATGATGATCC--------------------------------------
-----------------ACACACAGATACTACCTACTGGATACTACGTCTGACCAATCATTC----AGAAAAATACTCCC
TCCGTCCCACAATATAAGAGCGTTTTTGACACTAATGTAGTGTAAAAAACGCTCTTATATTATGGGACGGAGGGAGTAGA
AGATAAGAACATA-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ATGGCAGACGGTTCACCGTGGTAGGTGGTTCCGT--TCTAACTCTGGGTC
GGTGTGCTTGCAGGGTGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGA
TCAGTTCATTGGACCGATG---A---------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>chr7D_1_TraesCS7D01G082500
ATCACCATTTTTGTTTATGTGGCATT--TATGTTACTACATATGTTACTCTCACTATGACTATCCTCATGGCCGGAGATG
AGGAACGGGTGCCGGTGATCATTTAGATTAGGTATTAATTATGCCTCAAGAGCCGAACGAGCACCACTTAGTTTATGTAA
ATGTAATGAAATCCGTCATGTTTATATGAAATCCGTCATTTTTATATGAATCGGCCCATGTTTGGATGAATTTCATCCGG
TTTATTGCAAAAGTGTTTGAAATGTGTACGGCTAAGGTTGGATGGCAGCCTTCAGAATCCATGTCCACGGACCGGTGCCC
CCTCTCCGCACACAGATGCGAGAGGAAATATGCCGGTCGCCGTTGGGGATGCCTTTAGAGCGACATGGATGAC---CATT
GCAACTCAACACCAGAGCTCTCACTTGTTTCTTCTTACCACATGGCT-------------AACAAAAGATCCCAATATTG
TTTCTTCGTCGGTATTATCCGCGTCGTCCTCCATTTCAGCCGTGGAAACTAAAGGTCGAGCCTA-------TCCTAAAAG
AAACGAATCAACATCACCGCGATGCAAGATTTCAACTCTGGGCATCTCATTTGAAGAGCCTTTCGTTTTCCCTCTGCAAA
CCAACCCAGCCCGGGCCCGGCCATCAAGGACTAGACCCCACTGCTG--GAGACGGCATAGATGGTTGGTGGTCATGGTAG
CCGGCATTGGTGGACACAAAACCCTTGTTCCCAACCCATCAAATGCATGTTGCAGGAGCTGCAACACTCCACGTCGTCAG
CGAAGATCCGAATCCCGCCG--AGCAAATCAGCGCACGCCTGTATTATTCATCCCCATCCACCTCTGCTACTCTATAAAG
AACCTCTCGGCCGCGGCCTCTCGGAGCCCCGAAGGCC----ACTCTGACTCGCGCTCTTCCCTCTCTGTCCCTCTGGCTC
CCAACCAAGAAAGAGCGACGACGGCGACACGTCTA-GGTAGTCGGAACGGAACCGGTTGCGTGCTGTACGGAGCATGGGG
CTCCTCGACCAGCTCTGGGACGAGACGGTCGCCGGCCCCAGGCCGGACCACGGCCTCGGCAGGCTCCGCAAGTACTCCTC
CTTCTCGCCCTCGA------CCGCGGCGGCCACGGACGTCGCGCCGGCGGTGACCCGCAGCATCACCATCGCCCGGCCGC
CATCTCTCTCGGTGCCATCTGGCGAATCAAGCTCCTTGCCGCCGTCCCCGGCCAGCGCGCCGGACTCCCCGTTCGCAGCA
GGTGGGCCTCCTCCTCTGTTTCTTGGGCT----CTCCCGGTGATTTCCGTTCGGTCT----------TCTGTGACT----
--CTGTGTAG------TGCTGATCGACCGTGATCGCTTCTGTTCGATCGG-----CGATGCGTCGCT-------------
-------------------------------------------------TTGTCCCTCGAGCGCGATGCAGCCACAGAAT
CAGATCCGTGACCA---CTGT---CGCAGACGCACAGATGTCGGGAAATTTGCTGTTTAACCTG--AAATTCCTCTCATT
AAATTGATGTTTTATCTGA-TCTTTAT-----------------------------------------------------
---GTTGCAGCTACCAGTAGGAG---------GGACGGCTGGAGGGCGTTCAGGCGGAAATCCAAGATGGCCAACGTCGA
CGTCGTCCGGCCTGAGACGGCCGTCGGGCCCAGAAGCCCCACCGTGTACGACTGGTGCG-TTTAAACGTCGCCCTCGCAC
TCACTCCATGCTCCTTGCACCATACC-----AATGATGATCC--------------------------------------
-----------------ACACACAGATACTACCTACTGGATACTACGTCTGACCAATCATTC----AGAAAAATACTCCC
TCCGTCCCACAATATAAGAGCGTTTTTGACACTAATGTAGTGTAAAAAACGCTCTTATATTATGGGACGGAGGGAGTAGA
AGATAAGAACATA-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ATGGCAGACGGTTCACCGTGGTAGGTGGTTCCGT--TCTAACTCTGGGTC
GGTGTGCTTGCAGGGTGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGA
TCAGTTCATTGGACCGATG---AAGCAGCACGC---CCAAGGTACGAAATAATGGACCAATGCCGATGAAGCAGATGAGC
TTAGCTGGTGTGTTTGAGGCCGTGTGTTCATCATGTCATATGCATACCTGCTACT---GTGTAATCGTTGTGTTAATTAG
ATGCACC-T--TTCTTCTTCTTTTTTATGTAGTTGTGCGCCCCTCTGGGCTGCG-AAAGTATGTGATGTAGTTAGCAGT-
-------AG-------CTCCGGTTGAGGCAATCGAGATGTGTTGCCATCATGG-----GGCACCTTTTGGTGTGTG----
--TGGAGGAGATGAGCGCTGAAATGAGGATGCAATGCAAGTGTTCAATCATGCTTCGTTTTCTTATTATCATTGTGCAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTACTGTAATTGAGTACCATGTGT
GTCTGGAGTTAAATGCAACAAATCACCCTAAATC--------------ATACCGACCAATGGAACAGACACCCCCTTAGT
TGGTTA--AGGGTCGGGTCTTTTGGGCATAACGGGTGACTGCG-AAAATAAGTTACCCTCTATCCAGCTTATGGATGGCC
AAACAAAAGTGCTTGAGAAAGACCAAAAAGCAATATGGATGTTTCCTCATAGTCAAAAAATATGAAATAATTTCAATTAA
AAAGAACAGTTTGTAAGGTGAACATT---AAAAAAATATGAATATTTTTAAGAAAGGCGGACATTTTCAAGATTCATCAC
CATTT-TTCTCTACTTTCATGAATCTATATCTATACCTCTATATCTATATCTATATCTATATCTATATCTATACCTACTA
ATAAAGGAAGGTGTGTTTCGTCAATTTTTTCATCCGTTCACCGCCGAAAAGAGTTTTTGTCAATCCGAGGTGGTACTAAA
TTCTAATGCCTTTATCTGCTAGAAAAAGA-TTTTCGTACGTGGGCCACGCGCTGT-GCCCAGCGAAACCAGCCCACTTAT
TTTTCTGTCCAT--------GAAAACTCTATTTTCCGCACTGGGCGATAGATAGTCAGAATTTCGCAAAGGATAACCAAT
AATGGGCTTGCCCATTTTTCCTTTTTG
>chr7A_1
ATCATCATTTTTATTTAGGTAGCATCTATATGTTACTACCTATATTACTCCCACTATGACCATCCTCATAGCCGGAGATG
AGGAATGGGTGCCGGCGATTATTTAGATTATGTATTAATTATGCCTCAAGAGCCGAACGAGCACCGCTTAGTTTATGTAA
ATGTAATAAAATACGTCATGTTTATATGAAATAT-------------------GCCCATGTTTGCATGAATTTCATTCGA
TTTGTTGCAAAAGTGTTTGAAATGTATACGGCTAAGGTTGTATGGCAGCCTCCGGCATCCGTATCCACAGACTGAT-CCC
CCTCTCCGCAGACAGATGCGAGAGAAAATTTGCGGGACGCCGTTTGGGATGCCCTTAAAGCAACATCGAAGAAGATCATT
GCAACTCGACACCAGAGCTCTCACTTGTTTCTTCTTACCACATGGCATGTGTGGTAAGCAAACAAAAGATCCCAATATTG
TTTCTTCTTCGATACTATCCGCATCGTCCTCCATTTCAGCCGTGGAAATTAAAGGTCGAGCCTATCCTAATTCCTAAAAG
AAACGAATCAACATCACCGCGATGCAATATTTCAACTCTGGGCATCTCATTTGAAGAGCCTTTCGTTTTCCCTCTCCAAA
CCAACCCAGCCCGGGCCCGGCCATCAAGGACTAGACCCCACTGCTG--GAGACGACATAGATGGTCGATGGTCATGGTAG
CCGGCATTGGTGGACCA--------------------ATCAAATGCATGTTGCAGGAGCGGCAACACTCCACGTCGTCAG
CGAAGATCCGAATCCTGCCG--AGCAAATCAGCGCACGCCTGTATTATTCATCCCCATCCACCTCTGCTGCTCTATAAAG
AACCTCTCGGCCGCGGCCTATCGGAGCCCCGAAGGCC----ACTCTGACTCGCGCTCTTCCCTCTCTGTCCCTCTGGCTC
CCAACCAAGAAATAGCCACGACGGCGACACGTCTA-GGTAGACGGAACGGAACCGGTTGCGTGCTGTACGGAGCATGGGG
CTCCTCGACCAGCTCTGGGACGAGACTGTCGCCGGCCCGCGGCCGGACCACGGCCTCGGCAGGCTCCGCAAGTACTCCTC
CTTCTCGCCCTCGA------CCGCGGCGGCCGCGGACGTCGCGCCGGCGGTGACCCACAGCATCACTATCGCCCGGCCGC
CATCTCTCTCGGTGCCATCCGGCGAATCAAGCTCCGTGCCGCCGTCCCCGGCCAGCGCGCCGGACTCCCCGTTCGCAGCA
GGTGGGCCTCCTCCTCTGTTTCTTGGCCT----CTCCCTGTGATTTCCATTCTTTAATTAGGATCGGTCTGTGACT----
--CTGTGTAG------TGTTGATCGACCGTGATCGCTTCTGTTGGATCGG-----CGATGCGTC----------------
-----------------------------------------------GCTTGTCCCTCGAGCGCGATGCAGCCACAGAAT
CAGATCCGTGACCA---CTGT---CCCAGTCGCAGAAATGTCGGGAAATTTGCTGTTGAACCTG--AAATTCCCCTCATT
AAATTGATGTTCTATCTGAATCTTTAT-----------------------------------------------------
---GCTGCAGCTACCAGTAGCATACGGAAAGTGGACGGATGGAGGGCGTTCCGCCGGAAATCCAAGATGGCCAACGTCGA
CGTCGTCCGGGCGGAGGCGACCGTCGGGCCCAGGAGCCCCACCGTGTACGACTGGTGCG-TTTAAACGTCGCCCTCGCTC
TCACTCCATCCTCCTTGCACCATACC-----AATGATGATCC--------------------------------------
-----------------ATACATAGATACTACCTACTGGATACTATGTCTGACCAATCATTC----AGAAAAATAGAACA
T-------------------------------------------------------------------------------
-----AAGAACAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ATGGCAGACGGTTCACCGTGGTAGGTGGTTCCGT--TCTAACTCTTGGTC
GGTGTGCTTGCAGGGTGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGA
TCAGTTCATTGGACCGATG---AAGCAGCACGC---CCAAGGTACGAAATAATCGACCGATGCCGATGAAGCAGAGGAGC
TTAGCTGGTGTGTTTGAGGCCGTGTGTTCGTCATGTCATATGCATACCTG---CT---GTGTAATCGTTGTGTTAATTAG
ATGCACTTTCCTTCTTCTTCTTTTTTATGTAGTTGTGCGTCCCTTTGGGCTGCG-AAAGTATGTGATG------GCAGT-
-------AG-------CTCCGGTTGAGGCAATCGAGATGTTTTGCCTTCACGAGGCAAGGCACCTTTTGGTGTGTG----
--TGGAGGAGATGAGCGCTGAAATGAGGATGCAATGCAAGTGTACAATCATGCTTCGTTTTCTTACTATCATTGTCCATG
TACTACCTCCGTCCCGGTGTATAAGTCATTCGCGTAGTTCTACGTCGATAATTTAACTATCTAAATATGTATTATATGTG
ACAAAAAATATATATTTAAAAAGTACATCCGTGTGGAAATCTAGTGGTATACTTTTCATGACATATGACACATATTTAAT
TCCTTAAATCGATGACCAAGAACTACGCGAATGACTTATACACCCGGACGGAGGGAGTACTGTAATTGAGTACCATGTGT
GTCTGGAGTTAAATGCAACAAATCACCCTAAATC--------------ATACCGGCCAATGGAACAGACGCCCCCTTAGT
TGGTTATAAGGGTCGGGTCTTTTGGGCCTTATGGGTGACTGCG-AAAATAAGTTTCCCTCTACCCAGCTTATGGATGGCC
AAACAAAAGTGCTTGAGAAAGACCAAAAAGCAATATGGATGTTTCCTCATAGTCAAAAAATATGAAATAATTTCAATTAA
AAAGAACAGTTTGTAAGGTGGACATT---AAAATAATATGAATACTTTTAAGAAAGGTGGACATTTTCAAAATTCATCAC
CATTTTTTCTGTACATTCATGAA--------------TCTATATCTATATCTATAACTATATCTATATCTATACCTACTA
ATAAAGGAAGGTGCGTTTCGTCAATTTTTTCATCTGTTCACCGCGGAAAAGAATTTTTGTCAATCTGAGTTGGTACTAAA
TTCTAATGCCTTTATCTGCTAGAAAAACATTTTTCGTACGTGGGCCGCGCGCTGTGGCCCAGCGAAACCAGCCCACTTAT
TTTTCTGTCAACGCAGTTGGGAAAATTCTATTTTCTGCACTCGGCGATAAATAGTAAGAGCTTCCCACAGGGTAACCAAT
AATGGGTTGGCCCATATTTCTTTTTT-
>chr4A_460
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TTG
TTTCTTCTTGGGTACTATCCGCATCGTCCTCCATTTCAGCCGTGGAAATTAAAGGTCGAGCCTATCCTAAAAGAAACA--
-----AATCAACATCACCACGATGCAAGATTTCAACTCTGGGCATCTCATTTGAAGAGCCTTTCGTTTTCCCTCTGCAAA
CCAATCCAGCCCGGGCCCGGCCATTAAGGACTAGACCCCACTGCTCGAGACACGACACAGATGGTTGATGGCCATGGT--
-----------GGGCACAAAACCTC--TTCCCAACCCACCAAATGCATGCTCCAGGACCGGCAACACTCCACGTCGTCAG
CGAAGATCCGAATCCCGCCCCAAGCAAATCAGCGCACGCCTGTATTATTCATCCCCATCCACCTCTGCTGCTCTACAAAG
AACCTCTCGGCCGCGGCCTCTCGGAGCCCCGAAGGCC----ACTCTGTCTCGCGCTCTTCTCTCTCTGCCCCTCTGGTTC
CCAACCAAGAAAGAGCGACGACGGCGACACGCCTA-GGTAGACGGAACGGAACCGGTTGCGTGCTGTACGGGGCATGGGG
CTCCTCGACCAGCTCTGGGACGAAACGGTCGCCGGCCCGCGGCCGGACCACGGCCTCGGCAGGCTCCGCAAGTACTCCTC
CTTCTCGACCTCCA------CCCCGGCGGCCGCGGACGTCGCGCCGGCGGTGACCCGCAGCATCACCATCGCCCGGCCAC
CGTCCCTCTCTCTCCCGTCCGGCGAATCAAACTCCGTGCCGTCATCACCGGCCAGTGGGCCGGACTCTCCGTTGGCAGCA
GGTGGGTTTCCTCCTCTGTTTCTTGGCCT----CTCCCTGTGATTTCCATTCTTTAATTAGGACCGGTTTGTGACT----
--CTGTGTAG------CGTTGATCGACCGTGAACGCTTCTGTTGGATTGGATCTGCGATGTGTCGATTCGTTGGTATCCC
ATGAAAATGGGGCAAGAAAAACATGGACCTTTTGCTTTAG---CATGGCTTGTCCCCGGGGCGCGAAGCAGCCACAGAAT
CAGATCTGTGAGCAGTCCCAGAGACCCAGACGCAGAGATGTCGGGAAATTTGCTGTTGAACCTG--AAATTCCCCTCATT
AAATTGATGTTCTATCTGAAACTTTAT-----------------------------------------------------
---GCTGCAGCTACCAGTAGCACGGCGAGGGTGGACGGCTGGAGGGCGTTCCGCCCGAAATCCAAGATGGCCAACGTCGA
CGTCGTCCAGTCGGAGGCCACCGTCGGGCCCAGGAGCCCCACCGTGTACGACTGGTGCG-TTTAAACGTCGCCCTCGCTC
TCACTCCATGCTCCTTGCAC------------ATGATGATCC--------------------------------------
-----------------ATACATAGATACTACCTACTGGATACTATGTCTGACCAATCATTC----AGAAAAATAGAAGA
T-------------------------------------------------------------------------------
-----AAGAACAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ATGGCAGACGGTTCACCGTGGTAGGTGGTTCCGT--TCTAACTCTGGGTC
GGTGTGCTTGCAGGGTGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGA
TCAGTTCATTGGACCGATG---AAGCAGCACGC---CCAAGGTACGAAATAATCGACCG-----GATGAAGCAGAGGAGC
TTAGCTGGTGTATTTGAGGCCGTGTGTTCGTCATCTCATATGCATACCTG---CTACTGTGTAATCGTTGTGTTAATTAG
ATGCACTTTTCTTCTTCT-CTTTTTTATGTAGTTGTGCGTCCCTTCGGGCTGCG-AAAGTATGTGATGTAGTTAGCAGT-
-------AG-------CTCTGGTTGAGGCAATCGAGATGTGTTGCCTTCACGG-----GGCACCTTTTGGTGTGTGTGTA
TGTGGAGGAGATGAGCTCTTAAATGAGGATGCAATGCAACTGTTCAATCATGCTTCGTTTTCTTACTATCATTGTCCAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTACTGTAATTGAGTACCATGTGC
GTCTGGAATTAAGTGCAACAAT---------------CACCCTAAATCATACCGACCAATGGAACAGAGCACCCCTTAGT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>chr7A_842
--------------------------------------------------------------------------------
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----------------------------------------------------------------------CTCTATAAAG
AACCTCTCGGCCGCGGCCTCTCGCTGCCCCGAAGGCCGGCCACTTTGTCTCAGCCTT---------TGTCTCTCTGGTTC
CCAGCCAACAAAGAAAGACCACGGCGAGTCGGCGACGGTACACGGAACCAATC-------------------GCATGGGC
CTCCTCGACCAGCTCTCGGACGACACGGTCGCCGGCCCGCGGCCGGACCACGGTCTCGGCAGGCTCCGAAAGTACTCCTC
CTTTTCGCCCTCCTCGTCAGCCGCGCCGACCACGGACGTCCAGCCGACGGTGACCCGCAGCATCAGCATCTCCCGGCCGC
CGTCTCTCTCACCCCCGTCCGGCGAGTCGACTTCCTTGCCGTCCTCCCCGGCCAGTGCGCCGGACTCTCCGTTCGCAGCA
GGTGGGTCTCCGCCTCTGTTTCTTGGCCT----CTACCTATGATTTC-GTTCTTTGATTAGGATCGGTGTGTGACT----
--CTGTCTCTGTGTGCCGCTCATCGACCGTGACCGCTTCTGTTGTATCTG-----CGATATGTTGATCCGTGGGT-----
------ATGGGGCAAGAAGAACATGAACTTTTGCTTAATACATCATGGCTTGTTGCTCGAGCTCGATCCAGCCACAGAAT
CAGATATGTGCCCAATTCTGT---TGCAGACGCAGAGTTCTATCTGAAATCAGTCGTTTCCTCTGAAATTCCTCCTCGTT
AAACTGTTCTTCTATCCGAAACTTTATTCAGAAAAGTTATGCCAAGTTGTGGACACTGCATCAGTGGTTAATCTGCCTGA
ACTGTTGCAGGTAGCAGTAGCACGCCGAGGGTGGACGGCTGGAGGGCGTTCCGCCGGAAATCCAAGATGGCCAACGTCGA
CGTCGTCCGGGAGGAGGCGACCGTCGGGCCCAGGAGCCCCATTGTGTACGACTGGTACGATTTAAACGTCACCTTCACTC
TCACTCCATGCTCCTTGCACCATACC-----AAT----------------------------------------------
--------------------------------------------------------------------------------
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>chr7A_999
--------------------------------------------------------------------------------
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------------------------------------------------------------------------GCATGGGC
CTCCTCGACCAGCTCTGGGACGAGACGGTCGCCGGCCCACGGCCGGACCACGGCTTCAGCAAGCTCCGGAAATACTCCTC
CTTCTCGCCCTCGA------GCCCGGCGGCCGCAGACGTCGCGCCGGCGGTGACCCGCAGCATCACCATCGCCCGGCCGC
CGTCTCTCTCCCTCCCGTCCGGCGAGTCGAGCTCCGTGCCGTCCACCCCGGCCAGTGCGCCGGACTCCCCGTTCGCAGCA
GGTGGGTCTCTGCCTCTGTTTCTTGGCCT----C--CCTATGATTTCCGTTGTTTAATTAGGATCGGTATGTGACTCAGT
GACTGTGTAG------CGCTGATCGATTGTGATCGTTTCTGTTGGATCGG-----CGATGCGTCGATCCGT---------
-------TCGGGCAAGAAAAACATGGACCTTTTGCTCTAG---CATGGCTTGTTCCTCGAGCTCG-AGCATCCACAGAAT
CAGATCTGTGACGA---CTGT---CGCAGACGCAGAGATGTCGACAAATTTGCAGTTTGACCTG--AAATTCCCCTCGTT
AAATTGATGTTTTATCTGAAACTTTAT-----------------------------------------------------
---GTTGCAGGCACCGGTAGCACGCCGAGGGTGGACGGCTGGAGGGCGTTCCGCCGGAAATCCAAGATGGCCAACGTCGA
CGCCGTCCAGGCAGAGGCGACCGCCGGGCCCAGGAGCCCAACCGTGTACGACTGGTGCG-TTTAAACGTCACCTTCACTC
TCACCCCATGCTGCTTGCACCATACG-----AATGATGATCCCATACACAAAAAACTCTCTCACCCCATGCTGCTTGCAC
CATACGAATGATGATGCATACACAAAAACTAC----------CTACGTCAGACCAATCATTC----CGTTGAA-------
-----------------------------------------------------------------------------AGA
AGATAAAGAACAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ATGGCAGAAGGGTCACCGTGGTAGGTGGTGGTTCCGTTTAACTTCGGATC
GCCGTGCTTGCAGGGTGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGA
TCAGTTCATTGGACCGATAATAAAGAAGCACAA---CCGGAGTGTGAAATAATCGATCGAAG------AAGGGGAGGAGG
-TAGCTGGCGTGTTTGAGGCCGCGTGTTCGTCACGTCATATGTATACCTG---CTATTGTGTAATCGTTGTGTTAACTAG
GTGCACTAT--CTTTTCTCTTCCTTTACGTAGTTGTGCGCCCTTTCGGGGGGCC-AAAGTATGTGATGTGGTTATCAGT-
-------AGTAGGCTC------------CGATCAAGATGTATTGCCATCACAAAGGCGCCCTTTATTT----------TA
TATGGAGGAGATGACCGTTGAAATGGGGTTGCAATGCAAGTGTTCGATCATCCTTCCTTTTCCTACTATAATTGTCCAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTATTGTAATTGAGTACCATGTAT
GTATGGAGTTAAATGCAACAAATAACCCTAATTTTGCCACCGTAAATCATACCATCCAATGAAATAGATCCCCTTAGCTG
GT----TAAGGGCCATGTCTTTTAGAACTTATAGGTGACTGCCAAAAATAAGCTGCCCTCTACCTAGCTCATGGGTGACC
GGACAAAATTGCTTGAGAAAGACAAAAAGACAATACGGTTAATTCCTCCTAGCC--------GAAAT--ATTTTTAATTA
TAACGACAATTTTTAAAGTGAATATT---AAAAGGTTATGAATATTTTTAAGAAAAGTGAACATTTTTAAGATTTGTGAC
CATT--CTCTCTACTTTTATGAA--------------T------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>chr4A_999
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------GCATGGGG
CTCCTCGACCAGCTCTGGGACGACACGGTCGCCGGCCCGCGGCCGGACCACGGCTTCAGCAAGCTCCGGAAATACTCCTC
CTTCTCGCCCTCGA------GCCCGGCGGCCGAAGACGTCGCGCCGGCGGTGACCCGCAGCATCACCATCGCCCGGACGC
CGTCTCTTTCCCTCCCGTCCGGCGAGTCGAGCTCCGTGCCGTCCTCCCCGGGCAGTGCGCCGGACTCCCCGTTCGCAGCA
GGTGGGTCTCTGCCTGTGTTTCTTGGCCTTTCTC--CCTATGATTTCCGTTGTTTAATTACGATCGGTATGTGACT----
--C--TGTAG------CGCTTATCGACCGTGATCGCTTCTGTCCGATCGG-----CGATGCGTCGATCCGT---------
-------TGGGGCAAGAAAAACATGGACCG-----TTTAG---CATGGCTTGTCCCTCGAGCGAGATCCATCCATAGAAT
CAAATCTGTGATCA---TTGC---CGCAGACGCACGGATGTCGGGAAATTTGCTGTTTAACTTG--A-------------
-AATTGATGTTTTATCTG-AACTTTAT-----------------------------------------------------
---GTTGCAGCTACCAGTAGGAG---------AGACGGCTGGAGGGCGTTTCGCCGGAAATCCAAGATCGCCAATGTCGA
CGTCGTCCGGGCAGAGGCGGCCGTCGGGCCCAGGAGCCCCACCGTGTACGACTGGTGCG-TTTAAACGTCACCTTCACTC
TTACCCCATTCCGCTTGCAA-----CATACGAATGATGATCC--------------------------------------
-----------------ATACACAAAAACTACCTAC----------GTCAGACCAATCATTC----TGTTGAA-------
-----------------------------------------------------------------------------AGA
AGTTAAAGAACAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ATGGAAGAAGGGCCACCGTGGTAGGTGGTGGTTCCGTTCAGGGGCGGACC
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGA
TCAGTTCATTGGACTGATAATAAAGAAGCACGA---CCGGAGTGTGAAATAATCGGTCGAAG------AAGAAGAGGAGG
-TAGCTGACGTGTTTGAGGCAACGTGTTCGCCACGCGATATGGATACCTG---CTATTGTGTAATCGTTGTGTTAACTAA
GTGCACTAT--CTTTTCTCTTCTTTTACGTAGTTGTGTGCCCTTTCGGGGTGCC-AAAGTATGTGATGTGGTTAGGAGTG
CTGCAGTAGTAGGTTC------------CGATCAAGATGTGTTGCCTTGA--G-----GGCGCCTTTTGGTGCGTG----
--TGGAGGAGATGAGCGCTGAAATGAGGATGCAATGCAAGTGTTCGACCATGCTTCCTTTTCCTACTATCATTCTCCAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTACTATAATTGAGGACCATGTAT
GTGTGGAGTTAAATGCAACAAATCACCCTAAATCTGACACACTAAATCATACCCTCCAATGAAACAGATCCACTTACCTG
TT----TAACGGCCGGGTCTTTTGGAACTTATGAGTGACTGCCAAAAATAAGCTACCCTCTACCCAGCTAATGGGTCATC
GGACAAAATTGCTTGAGAAAGACCAAAAGACAAAACAGTTGATTCCTCATAGCCAAAACTATGAAAT--ATTTTTCATTA
CAAAAAAAGTTTGTAAAGTGAATGTTAAGAAAAAGTTATAAATATTTTTAAGAAAAGTGAACATTTTTAAGATTCTTGAT
CATT--TTCCTTACTTTCTTGAA--------------T------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>chr7D_1359
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GTCCCCGGAGCGCGATGCAGCCACAGAAT
CAGATCTGTGACCG---CTGT---TCCAGACGCAGAGATGTCGGGAAATTTGCTGTTGAACCTG--AAATTCCCCTCATT
AAATTGATGTTCTATCTGAAACTTTAT-----------------------------------------------------
---GCTGCAGCTAGCAGTAGCACGCCCAGGGTGGACGGCTGGAGGGCGTTCCGCCGGAAGTCCAAGATGGCCAACGTTGA
CGTCGTCCGGGCGGAGGCAACCGTCGGGCCCAGAAGCCCCACCGTGTACGACTGGTGCG-TTTAAACGTCACCTTCTCTC
TCACTCCATGCTCCTTGCACCATACCATACGAATGATGATCC--------------------------------------
-----------------ATACACAAATACTACCTACTGGATACCACGTCAGACCTATCATTCTTCTAGAAAAAAAGAAGA
T-------------------------------------------------------------------------------
-----AAGAACACATAAAAGAACTGTTTTGCTAAGTCTCGGTCGACTAAGACATGGTAATGCTATATTCGTTCGATTTTG
CGTGAAGACCCATGCACAGTTTTCCTTTTAGTTTTTTCTTTTTTTATATATACTATGTTACTTGACTGAGACTTGATTAA
ATCTTAGTCGATCGAGACCTACTCACACCCATAGCAGAAGGGTCACCGTGC-------TTCCAT--TTTAACTTCGGATC
GACATGCTTGCAGGGTGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGA
TCAGTTCATTGGACCGATG---AAGCAGCACATCCACCGAGGTACGAAATAATCGATCGATG------AAGCAGAGGAGC
-TAGCTGGTGTGTTCGAGGCCGTGTGTTCGTTATGTCATATGCATACTTG---CTCTTGTGTAATCGTTGTGTTAACTAG
GTGCAC----------------------------------CCTTTTGGGCTGCGAAAAGTATGTGATGTAGTTAGCAGT-
-------AGTACTACGCTCCGGTTGAGGCGATCGAGTTGTGTTGCCTTCAGGG-----GGAGCCATTTGGTATGAGTGCG
C--GGAGGAGATGAGCGCTGAAATTAGGATGCAATGGAAGTGTTTGATCATGCTTCGTTTTC---------TTGTCCAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TAACTATAATTGAGTACCATATGT
GTGTGGAGTTAAATGCAACAAATCACCCTAAATTTGCCACCCTAAATTATACCTACCAATGAAACGGATCCCCTTAGCC-
GT----TAAGGGCCAGGTCTTTTGGGGCTTATGGGTGACTGTC-AAAATAAGTTCCCCTCTACCCAGTTTATGGGTGACC
AGACAAAAGTGCTTGAGAAA-ACCAAAACGCAATATGGTTGTTTTCTCATAGTAAAAAATATGCAAT--ATTTTAATTTA
CAAGAACAGTTTGTAAAGTGAATACTA--AAAAAGTTATGAATCTTTTTAAGAAAAGTGAACATTTT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>SNPs
----S-------S----S--S----S-------------S---S------S---------S--------S----------
-----S---------S---S----------S----------------------------------S--------------
-------S----S-------------------SSSSSSSSSSSSSSSSSSSSS-----------S-----------S--S
---S---------------------S--------------S----------S-S-S----S-S-----S---S-S-S---
----------S-------------S----S---S--S-------S--------S---S---S----S--S--S-------
-------S--------------------------------------S---------------------------------
-------S------S-------S-------------------------S-------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S------------S------------
-----------------------SSSS--------------------------------S--------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------SS----------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------S-----------S-------------SS-SS-----------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
---------------------------------------------------S-S--------------------------
----------S-S---S-------------------------------------------------------------S-
--------------------------------------------------------------------------------
------------------S--------------------------------------------------------SSS-S
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
------SS-SSSS-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S----S----------------S----
-----------------------------S--------------------SSS---------------------------
------S-------------------------------------S-----------------------------------
--------------------------------------------------S-----------------------------
-----------------------------------------------------------------S---------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
---------------------------S-S-S------------------------------S-----------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
-----------------------SSSSSSSSSSSSSS------------------S------------------------
-------------S--------------------S---------S-------S------------S---S----------
---------------------------S------------------S---------------------------------
---------S-S-------------S---------S-----S-------S-----S---SS---S--S---S--------
------S-S------S----S-----S
>forward_382
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TTGGGGATGCCTTTAGAGCG------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_2063
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TGGGACGGAGGGAGTAGA
AG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>forward_2011
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AATACTCCC
TCCGTCCCACA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_3788
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GATTTTCGTACGTGGGCCAC---------------------------------
--------------------------------------------------------------------------------
---------------------------
