>input_sequence_65667
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----------------------------------------ATGCAACGGATAATTTTGATGAAAAACATTGCATTGGAGA
GGGGGGGGTTTGGTAATGTCTACAAGGTGGATCTCCCAGATGGACAAGTGGTTGCAGTGAAGAAGCTTCATCCTATTGAG
GAAGGGATGCATGATGAGCAATGCTTTCGTCGTGAGATTGAAGTACTAACAAAAGTCCGTCAGCGCAGCATTGTCAAGCT
GTATGGATTCTGTTCCCATACGCAGTACAGGTTCCTGGTTTGCCAATACATAGAAAGGGGGAGTCTAGCCTCAATCCTGA
ACAACAATGACCAAGCAATCCAAGTTGATTGGCAGAAAAGAGCAATTCTCATCAAGGATGTTGTGCAAGCTATTTCCTAC
CTACACCATGGCTGTGATCCACCTATAATCCATCGGGACATAACGAGTAGCAACATTTTGCTAGATTCTGAATACAAGGC
CTTTGTCTCGGACTTTGGCACGGCAAGGATATTGAAGCCCGATTCATCGAACTGGACCGCGCTGGCGGGGACATACGGCT
ACATCGCACCTGGTAATCAAACTACCCCAGTGAAAACTGTTGGTTAATTG--TAGCTCCTTCAAAAACAATCCCTTGTAA
CTATGCTGCCTTGCTTGATGCAGAACTTTCTTACACGCCCTTGGTCACGGAGAAATGCGATGTCTACAGCCTCGGCGTTG
TGATGCTGGAGGTGCTGATGGGGAAGCATCCAGGAGAATTACTAAACAGACCTGCAGCTGCGCAAGAACAAGACATGATA
CTTCAAGAGCATCTCGACCGCCGTCTTCCCACGCCCAAGACCGACGAGGCGCAGGATATCAATCGGCTAATATCGGTGGC
GTTTCAGTGCCTACAAGATTCCCCTCATGAGAGGCCAGACACGCAGCAGATCCATCGAGCTCTCGGTGTATGA-------
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>chr7D_1_TraesCS7D01G084600
TCCTTAGTCATCCTCGACATCATGTACAATCAGATGGATGGAGATATAGCACAACAGCTTGGGGTGTACCCACATCTGAA
ATTTGTTGGGTTAACTTCAAACAAACTGCACGGTCAGCTTTCAACAGATTGGGGTTCATGCGGTAACTTGACAGAACTGC
GTTTAGGAGGAAACATGATTACTGGTCATATACCTCCTGAGCTCACAAAGCTAACCAAACTCAGAAAACTCGACCTCCAT
TTGAATAGGTTGACAGGGGAGATACCTCCTGAAATTGGCAAACTAGTCAACCTATATTTGCTAGACTTAAGCCAAAATGA
TCTATCTGGAAGCATTCCTCAAAACATTGGTCAAATGGATGTTCTTGAGGTTCTCGACCTGTCAAGCAATCAACTAGATG
GAAGAATACCAGAAGAAGTTGGGAAATGTGCGAGACTACAGTCCATGAAACTGAACAACAACAGCTTAAACGGCAGCCTT
CCTGGTTCCATAGGCAAACTGATTCGCCTACAGACAACACTTGATGTCAGCCATAACAACCTAGATGGTGCCATTCCTCC
AGAAATAGGAAATCTAGATATGTTGGTAAGCATAAACCTCTCCCACAATCAATTCAGTGGAAGCATTCCTGCCACGGTAG
CAGGACTCCGAAGCATGTCCGTATTTGATGTGTCCTACAACAGATTACAAGGCACAGTTCCGGGAAGGATCCATAATTCC
TCGGCAGAATGGTTTGTTCACAATAGAGGTCTCTGCGGGGAGCTGGCTGGCCTTCCGTCTTGTCATTCTTCTGCTGCAAA
TCATCAGAAAAAGGACCACATCCTCATGTTAAAAGTGGGTGTCCCTGTTTTTGTGGCTATTACTTGTATAGCTGCATGCA
TCTTCTTCGTTTTGATTTTGAGGAAGAAATCCTCTTCTAGAGAAAGTGCCATTGTAAAGAGAGGGGACCTCTTCTCCATA
TGGAACTTCGATGGTAAAATAGCTTTTGAGGATATCATCAATGCAACGGATAATTTTGATGAAAAACATTGCATTGGAGA
GGGGGGGGTTTGGTAATGTCTACAAGGTGGATCTCCCAGATGGACAAGTGGTTGCAGTGAAGAAGCTTCATCCTATTGAG
GAAGGGATGCATGATGAGCAATGCTTTCGTCGTGAGATTGAAGTACTAACAAAAGTCCGTCAGCGCAGCATTGTCAAGCT
GTATGGATTCTGTTCCCATACGCAGTACAGGTTCCTGGTTTGCCAATACATAGAAAGGGGGAGTCTAGCCTCAATCCTGA
ACAACAATGACCAAGCAATCCAAGTTGATTGGCAGAAAAGAGCAATTCTCATCAAGGATGTTGTGCAAGCTATTTCCTAC
CTACACCATGGCTGTGATCCACCTATAATCCATCGGGACATAACGAGTAGCAACATTTTGCTAGATTCTGAATACAAGGC
CTTTGTCTCGGACTTTGGCACGGCAAGGATATTGAAGCCCGATTCATCGAACTGGACCGCGCTGGCGGGGACATACGGCT
ACATCGCACCTGGTAATCAAACTACCCCAGTGAAAACTGTTGGTTAATTG--TAGCTCCTTCAAAAACAATCCCTTGTAA
CTATGCTGCCTTGCTTGATGCAGAACTTTCTTACACGCCCTTGGTCACGGAGAAATGCGATGTCTACAGCCTCGGCGTTG
TGATGCTGGAGGTGCTGATGGGGAAGCATCCAGGAGAATTACTAAACAGACCTGCAGCTGCGCAAGAACAAGACATGATA
CTTCAAGAGCATCTCGACCGCCGTCTTCCCACGCCCAAGACCGACGAGGCGCAGGATATCAATCGGCTAATATCGGTGGC
GTTTCAGTGCCTACAAGATTCCCCTCATGAGAGGCCAGACACGCAGCAGATCCATCGAGCTCTCGGTGTATGAATGGATC
CTGATTCCCTGAGTTGCATAAATTGTGGTCACATACTAGTACAGTAGTACTGCACTGAACATGCTCGGCCGAGCGAATCT
TCAAGTCTTGATGATTAATAAGCTGTAAATCAGGTAGGCACGACGAGCAAAAGATTGATGCATTGCATTGTTATATGGTC
GGAATCAAGAATGAATTCCCTAGCAAGCTCACCTTATAACGACCTGGGATCTTCGCCCAGGACTCGCGGCAGCTCAGGAC
GCATCCCTTTCCAATTAGCAATGGC-TTGTCTTGGCTCTCCCCTTATTCTCTCATCTCCGGCCGGCGAATCACCCATCGA
CGGCGGCACTTTGCTTCTTTTTATCTCCGACGGCAGGCGGCGGCGGGGGTAGGGAAGAACA-----GACAGCCGCAGAGC
ATTTTGATGGGCCTTGGAGGACAGAAATACAAAGCCCATTGTTCACAGCCCTTGTTATCCAAGGTCAGCCCAATACGGAA
TTCAGCAGGGAGCCCACT--------------------AT----ACCTGGCCATGGGAAGCCCGGCCCAGACGGCCCGAC
CCGACCTGACCTTGCCCATGGGCCTGGCCTGTGCCAAGATTTTGAGCCCGATGGCTGGGCCGGGCCTGGCTCCGGCCTGT
CGTATTTGCAGTTTAAGGAGGAGGCCTGGCC-------CGAGGCCCGACGAGCTTTTTGACTGATGGCCCG-GCTTGGGC
CTGATTTTTAGGCCTGACGATAGGGCCGGGCCAAGCTCGCGCCTAGGTTTTCTGTGTCGGGCTTTGGTAGGCCCGGCCCG
GCCTGACGGATGGCCAGGTATACTCCCCACGGGAGCGTCGCCTGCAGCGAGCCAGTACTGGGCTGGTCCAGTAACAACGT
GACATCATCACGCATGTCTTTTTCAACTTTATCTATATTTTA-AAAATATTAAATACATATATTAT-AAAAAATAAATTA
CTTGATTTTT-CAAAAAGTGTTCACAACACATTAAGAAGATGTAAATGCAGTGTATACAAATATTCGCACAATT
>chr7A_1
TCCTTAATCATCCTTGACATCATGTATAATCAGATGGAAGGAGATATAGCACAACAGCTTGGGGTGTACCCACATCTGAA
ATTTGTTGGGTTAACTTCAAACAAACTGCACGGTCAGCTTTCAACAGACTGGGGTTCATGCGGTAACTTGACAGAACTGC
GTTTAGGAGGAAACATGATTACTGGTCATATACCTCGTGAGCTCACAAAGCTAACCAAACTCAGAAAACTCGACCTCCAT
TTGAATAGGTTGACAGGGGAGATACCTCCTGAAATTGGCAAACTAGTCAACCTATATTTGCTAGATTTAAGCCAAAATAA
TCTATCTGGAAGCATTCCTCAACACATTGGTCGAATGGATGTTCTTGAGGTTCTCGACCTGTCAAGCAATCAATTAGGTG
GAAGAATACCAGAAGAAGTTGGGAAATGTGTGAGACTACAGTCCATGAAACTGAACAACAACAGCTTAAACGGCAGCCTT
CCTGGTTCCATAGGCAAACTGATTCACCTACAGACAACACTTGATGTCAGCCATAACAACCTACATGGCGCCATTCCTCC
AGAAATAGGAAATCTAGATATGTTGGTAAGCATAAACCTCTCCCACAATCAATTCAGTGGAAGCATTCCTAACACGGTAG
CAGGACTCCGAAGCATGTCCGTATTTGATGTCTCCTACAATAGATTACAAGGCACAGTTCCGGGAAGGATCCATAATTCC
TCGGCAGAATGGTTTCTTCACAATAGAGGTCTCTGCGGGGAGCTGGCTGGCCTTCCGTCTTGTCATTCTTCTGCTGCAAA
TCATCAGAAAAAGGACCAAATCCTCATGTTAAAAGTGGGTGTCCCTGTTTTTGTGGCTATTACTTGTATAGCTGCATGCA
TCTTCTTCACTTTGATTTTGAGGAAGAAATCCTCTTCTAGAGAAAGTGCCATTGTAAAGAGTGCGGACCTCTTCTCTATA
TGGAACTTCGATGGTAAAATAGCTTTTGAGGATATCATCAATGCAACGGATAATTTTGATGAAAAACACTGCATTGGAGA
AGGA-GGATTTGGTAATGTCTACAAGGTGAATCTCCCAGATGGACAAGTGGTTGCAGTGAAGAAGCTTCATCCAATTGAG
GAAGGGATGCATGATGAGCAATGCTTTCGTCGTGAGATTGAAGTACTAACAAAAGTCCGTCAGCGCAGCATTGTCAAGCT
GTATGGATTCTGTTCCCATACGCAGTACAGGTTCCTGGTTTGCCAATACATAGAAAGGGGGAGTCTAGCCTCAATCCTGA
GCAACAGCGACCAAGCAATCCAATTTGATTGGCAGAAAAGAGCAACTCTCATCAAGGATGTTGTGCAAGCTATTTCCTAC
CTACACCATGGTTGTGATCCACCTATAATCCATCGGGACATAACAAGTAGCAACATTTTGCTAGATTCTGAATACAAGGC
CTTTGTCTCGGACTTTGGCACGGCAAGGATACTGAAGCCTGATTCATCGAACTGGACCGCGCTGGCAGGGACATATGGCT
ACATCGCACCTGGTAATCAAACTACCCCAGTGAAAACTGCTGATTAATTACATAGCTCCTTCAAAAACAATCCCTTGTAA
CTATGCTGCCTTGCTTGACGCAGAACTTTCTTACACGCCCTTGGTCACCGAGAAATGCGATGTCTACAGCCTCGGCGTTG
TGATGCTGGAGGTGCTGATGGGGAAGCATCCAGGAGAATTCCTAAACAGACCTGCAGCTGCGCAAGAACAAGACATGATA
CTTCAAGAGCATCTCGACCACCGTCTTCCCATGCGCAAGACCGACGAGGCGCAGGATATCAATCGGCTAATATCGGTGGC
GTTTCAGTGCCTACAAGATTCCCCTCATGAGAGGCCAGACACGCAGCAGATCCATCGAGCTCTCAGTGTATGACTGGATC
CTGATTCCCTGAGTTGCATACAGTGTAGTCACATACTAGTACAGTA-----GCACTGAACATGCTCGGCCGAGCGAATCT
TCTAGTCTTGATGATTAATAAGCTGCAAATATGGTC----------ACAAAAGATTGATGCATTGCATTGTTATATGGTC
GGAATCAAGAATGAATTCCCTACCAAGCTCACCTTATATCGACCTGGGATCTTCGCCCAGGATTGGCGGAAGCTCAGGAC
GCATCCCGTTCCAATTAGCAATGGC-TTGTCTTGGTTCGCCACTGATTGTCTCCTCTCCGGCCGGCGAATCACCCATCGA
CGGCGGCACTTTGCTTCTTTTTATCTCCGACGGCGGGCGGCGGCGGGGGTAGGG-AGAAGGGACGGGACAGCCGCAGAGC
ATTTTGATGGGCCTTGGAGGACAGAAATACAAAGCCCATTCGTTCACGCCC---TTATCCAAGGTCAGCCCAATACGAAA
TTCAGCAGGGAGCG-------ATTCGTAGCGACCGACCGACCCAACCTGGCCATGGGCAGCCCGGCCCATACGGCCCGAC
TTGCT------------ATGGGCCTGCCCTGTGCCTAGATTTTGAGCCCGATGGCTGGGCCGGGCCTCGCTCGGGCCTGT
CGTATTTGCAGTTTAAGGAAGAGGTCTGACCCGCGGAACGAGCCCCAATGGGCTTTTTGACTAATGGGCCGGTCTTGGAC
CTCATATTTAGGCCTGACGATAGGGTCAGGCCGGGCTTAGGCCTAGATTTTCTGTGTCGGGCTTTGGTAGGCGTGGCCCA
GCCCGACGGATGGCCAGGTATACTCCCCACGGGAGTGTCGGCTACAGCGAGCCAGTAGTGGGCTGGTCCAGTAACAACAT
CATCTCGTCACGCATGTCTTTTTTAACTTCATTTATATTTGCGAAAATATTAAATACATATATTATGAAAAACTAAATTA
CTTGATTTTTTTAAGAAGTGTTCACGACACATTTAGAAGATGTAAATGCAGTGTATACAAATGTTC--------
>chr4A_1
TCCTTAATCATCCTCGACATCATGTATAATCAGATGGATGGAGATATAGCACAACAGCTTGGGGTGTACCCACATCTGAA
ATTTGTTGGGTTAACTTCAAACAAACTGCACGGTCAGCTTTCAACAGACTGGGGTTCATGCGGTAACTTGACAGAACTGC
GTTTAGGAGGAAACATGATTACTGGTCATATACCTCGTGAGCTCACAAAGCTAACCAAACTCAGAAAACTCGACCTCCAT
TTGAATAGGTTGACAGGGGAGATACCTCCTGAAATTGGCAAACTAGTCAACCTATATTTGCTAGACTTGAGCCAAAATAA
TATATCTGGATGCATTCCTCAAAACATTGGTCAAATGGATGCTCTTGAGGTTCTCGACCTGTCAAGCAATCAACTAGATG
GAAGAATACCAGAAGAAGTTGGGAAATGTGCGAGACTACAGTCCATGAAACTGAACAACAACAGCTTAAACGGCAGCCTT
CCTGGTTCCATAGGCAAACTGATTCACCTACAGACAACCCTTGATGTCAGCCATAACAGCCTACATGGTGCCATTCCTCC
AGAAATAGGAAATCTAGATATGTTGGTAAGCATAAACCTCTCCCACAATCAATTCAGTGGAAGCATTCCAGACACGGTAG
CAGGACTCCGAAGCATGTCCGTATTTGATGTGTCCTACAACAGATTACAAGGCACAGTTCCGGGAAGGATCCATAATTCC
TCGGCAGAATGGTTTATTCACAATAGAGGTCTCTGCGGGGAGCTGGCTGGCCTTCCGTCTTGTCATTCTTCTGCTGCAAA
TCATCAGAAAAAGAACCAAATCTTCATGTTAAAAGTGGGTATCCCTGTTTTTGTGGCTATTACTTGTATAGCTGCATGCA
TCTTCTTCACTTTGATTTTGAGGAAGAAATCCTCTTCTAGAGAAAGTGCCATTGTAAAGAGAGCGGACCTCTTCTCCATA
TGGAACTTCGATGGTAAAATAGCTTTTGAGGATATCATCAATGCAACGGATAATTTTGATGAAAAACATTGCATTGGA-A
GGGGGGGATTTGGTAATGTCTACAAGGTGGATCTCCCAGATGGACAAGTGGTTGCAGTGAAGAAGCTTCATCCTATTGAG
GAAGGGATGCATGATGAGCAATGCTTTCGTCGTGAGATTGAAGTACTAACAAAAGTCCGTCAGCGCAGCATTGTCAAGCT
GTATGGATTCTGTTCCCATACGCAGTACAGGTTCCTGGTTTGCCAATACATAGAAAGGAGGAGTCTAGCCTCAATCCTGA
GCAACAACGACCAAGCAATCCAATTTGATTGGCAGAAAAGAGCAGTTCTCATCAAGGATGTTGCGCAAGCTATTTCCTAC
CTACACCATGGTTGTGATCCACCTATAATCCATCGGGACATAACAAGTAGCAACATTTTGCTAGATTCTGAATACAATGC
CTTTGTCTCGGACTTTGGCACGGCAAGGATATTGAAGCCCGATTCATCGAACTGGACCGCACTGGCGGGGACATACGGCT
ACATCGCACCAGGTAACCTGACTACCCCAGTGCAAGCTGTTGGTTAATTACATAGCTCCTTCAAAAACAATCCCTTGTAA
CTATGCTTCCTTGCTTGATGCAGAACTTTCTTACACGCCCTTGGTCACCGAGAAATGCGATGTCTACAGCCTCGGCGTTG
TGATGCTGGAGGTGCTGATGGGGAAGCATCCAGGAGAATTCCTAAACAGACCTGCAGCTGCGCAAGAACAAGACATGATA
CTTCAAGAGCATCTCGACCACCGTCTTCCCACGCCCAAGACCGACGAGGCGCGGGATATCAATCGGCTAATATCGGTGGC
GTTTCAGTGCCTACAAGATTCCCCTCATGAGAGGCCAGACACGCAGCAGATCCATCGAGCTCTCGGTGTATGAATAGATC
CTGATTCCCTGAGTTGCATACAGTGTAGTCACATACTAGTACAGTA----------------------------------
-------TTGATGATTAATAAGCTGCAAATATGGTC----------GCAAAAGATTGATGCATTGCATTGTTATATGGTC
GGAATCAAGAATGAATTCCCTATCAAGCTCACCTCATAACAACCTGGGATCTTCGCCCAGGACTCGCGGCAGCTCAGGAC
GCATCCCTTTCCAATTAGTAATGGCTTTGTCTTGGCTCTCCCCTTATTCTCTCCTCTCCGGCCGGCGAATCACCCATCGA
CGGCGGCACTTTGCTTCTTTTTATCTCCAACGGCGGGCGGCGGCGGGGGTAGGGAAGAAGGTACGGGACAGCCGCAGAGC
ATTTTGATGGGCCTTGGACGACAGAAATAGAAAGCCCATTGTTCACAGCCCTTGTTATCCAAGGTCGGCCCAATAGGAAA
TTCAGCAGGGAGCGACTATTCATTCGTAGCGACTTCCCAT----ACCTGGCCATGGCCAGCCAGGCCCAGATGGCCCGAC
CCGACCTGACCTTGCCCATGGGCCTGGCCTGTGCCTAGATTTTGAGCCCGATGGCTGGGCCGGGCCTGACTCGGGCCTGT
CGTATTTGCAGTTAAAGAAAGAGGTCTGGCC-------CGACGCCCGACGGGCATTTTGACTGTTGGGCCGGGCTTGGGC
CTGATTTTTAGGCCCGATGATAGGGCCGTGCCGGGCTCGTGCCTAGGTTTTCTGCATCTGGTTTTGATAGGCCCGGCCTG
GCCCGACGGATGGCCAGGTATACTCCCCGCGGGAGTATCGCCTGCAGCGAGCCAGTAGTTGGTTGGTCGAGTAACAACGT
GATCTCGTCACGCATGTTTCTTTTAGCTTTATTTATATTTTGGAAAATATTAAATACATATATTATGAAAAAATAGATTA
CTTGGTTTTT-TAAAAAGTCTTCACAACAGATCTAGAAGATGTAAATGCGGTGTATACTAATGTTGGCACAATT
>SNPs
------S-------------------S-----------------------------------------------------
------------------------------------------------S-------------------------------
------------------------------------S-------------------------------------------
------------------------------------------------------------------------------S-
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-------------------------S-------------------------------------S----------------
-----------------------------------------------------------------------S--------
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---------------S----------------------------------------------------------------
------------------S-------------------------------------------------------------
--------SS-----------------------------------------------------S----------------
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-------S------------------------------------------------------------------------
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S------S---------------S--------------------------------------------------------
-----------S--------------------------------S-----------------------------------
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-------------------------------------------------S------------------------------
------------------------------------------------S-------------------------------
----------------------------------------S---------------------------------------
-------------------S------------------------------------------------------------
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--------------------S-S---S-------------------SSSSS-----------------------------
--S----------------------S----SS---SSSSSSSSSSS----------------------------------
----------------------S---------------------------------------------------------
-----------------------------------------------------S--------------------------
----------------------------------S------------------------SS-------------------
-----------------------------------------------------------------------------S--
-------------SSSSS---------------------------------------S----------------------
-----------------------------------S------------------------------------S-------
-------------------S----S-------------------------S----------------S------------
--------------------------------SS-----S----------------------------------------
---S-------------------------------S---------------------S----------------------
--SS--S----------------S--------S--------S--------------------------------------
-----------S---------------------S----------------------------S-----------
>forward_890
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----------------------------------------------------------------------GCTGCATGCA
TCTTCTTCGT----------------------------------------------------------------------
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>reverse_2036
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-----------------------------------AGGCACGACGAGCAAAAGAT-------------------------
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