>input_sequence_65654
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---------ATGACTGCGGCGCTTCGACTACAGGCGGCGGCGAGGATGCTCCAGCGATCTCCGGCGGAGCAACGGCTCCG
GCTGCTGCCACGGCTCTTGCACGGCGCCGGTTCGCCGTCGATCCCCTCCGCTGCTGCCGAGGTACGTACCTACATGCTCC
ATCATCTCAC------------------GACGTACTTTTCCTCATTAAAGCCTC--------ATACATGTACTCACTTGT
GTTGCGTTGCGTCCGTTGGTCACCAGAGGCTCTCGTTGGTGCAACTGCACGAGAGGCAGC------------AGGAGCTG
TACCCCGTGCTGCTCGAGCTAGACAAGAGAATACTAGGCAAACACC----------------------------------
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-------------------------------------------------------------------------ACAAGGC
CACCGGCTTGATCTTCCACACCAGATACTCGGATCT--------------------------------------------
---------------------------------------------GCTCGGGATCGTCAC--CAAGCACGTCGATCCTAG
ACCAAATGACTCCAACTGGTACGTAAGTATGGTGCATACTACCTCTGTCCTGGTTTAT----------------------
-------------------------------------TGGTCCCTTTATAATTTGTGCCAAATTTTAATCAAAGATTTAA
CTAATAAAATATTAGTGCATGTCAACAAAAAATATATCGTTGAATTTGTATTTGAATGTAATTTTTAATGATATAATTTT
TGGTGACATGCATAAATATTTTGTTAGTTAAATTTATGGTTAAAATTTGGCACGGAATACAATGAAGACCAATAAACCAG
GAGAGAGGTAGTACATACATACATACATACATACATACACACCTATTTTCTCTGCGCTCTTGTTAGTTAATCAGCAGTCT
TTTCTTTCATATGCATGCTTGCAGGCGGTGGTTTCGAGCCAAAGTGGTATTGTCCAATGGGTGCGCATGGTTGGTGAGTC
TGGGGTTCCTACATTGCATGTGCTTCCATGAT------CTGTTTGCTGCAAAAGAGACTCCCGCGGAAGAAGAAGAAAAT
GATGTAGATAAAGAGGAGTGA-----------------------------------------------------------
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>chr1D_1_TraesCS1D01G338600
ATATATAGCAATAATGCGTATAGAAAAAAGAAACCCAAGAGAGAAGGGACAACCAATGATAAACAATAAAGGAAGAAACA
AACCCGAAGAAAATGATAGAAAAGAAAAGTTAAGGAAAAAATTAGTAAAAACCAAGAAAGTAATAAAGAAAACTTTTGAA
AAACAATGAAATAAGAAAAGAAAAGAACCTGTGAAAATAGAAAAAAAAACAGAGAAAAACTGTGGAAAAACAAAAGAAAA
AACTTAAGAAAAAGGGCCGGAAACCCAGCGGAAAAACTGGCTGGTTTCGCATCAAGTAGGTAGCTCTCCTACTATTTAAG
TGCATCTCGAACAGACGCACAAAAACTGCTCCGCGCGCTAAAATTTTGGTTTTTT-GGCGCCGAACAGCTCTAGCGGAAA
CTATAAAATAGTGCACGCACAAAAAAGGATGGGGAACGCGCTAAAAATCGCTATTAAAAGCTGCAAATTTGGGGCACCGG
ATTACGCACGCTTCACAATTTGCGCTGCGTGTTTTTTGTACACACTTTTTTGACATCTGCTAAACCAATGTTTGGTCCGG
CGCGCTAAAAATGCTACAGTGACGCACATAAACTATTTTAGCATGCGAAATTTTTGTGCGCCTGTTGAAGATGCTCTAAC
ACCAACCGGCTGCAGCGCGGAATTATCAAAAAAAAAAAAACCGGATGCAGCGCCGGGCGTCTTAGGAGACCAGGGTTCCA
TCCCTTGCGCGCTCCCCTTTTCCTTCTCTTAGTTCATTTAACTGTGCGAGAATGGGCCAACCCACCCAATTACTGTAGAC
GCTTCAGTGAGACTGAAGAAAAA---------------------------------------------------------
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--CTCGCTATAAGTGAGATA------------------------------------------------------------
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--TAGCCTTTTAATTTTTTGCACGCGATGACATGGGCCGTCTGAGTCCGGTTCCACGTTGTGCTAAACTTGGGCCCGTAA
CGCGTTAGAGTTCTCGAAACAAAAAGGGTGATCTCCCATCGATACAAGC-------CGAGGAAGGGGTACGTATCGTCAT
CGATCGATCATGACTGCGGCGCTTCGACTACAGGCGGCGGCGAGGATGCTCCAGCGATCTCCGGCGGAGCAACGGCTCCG
GCTGCTGCCACGGCTCTTGCACGGCGCCGGTTCGCCGTCGATCCCCTCCGCTGCTGCCGAGGTACGTACCTACATGCTCC
ATCATCTCAC------------------GACGTACTTTTCCTCATTAAAGCCTC--------ATACATGTACTCACTTGT
GTTGCGTTGCGTCCGTTGGTCACCAGAGGCTCTCGTTGGTGCAACTGCACGAGAGGCAGC------------AGGAGCTG
TACCCCGTGCTGCTCGAGCTAGACAAGAGAATACTAGGCAAACACC----------------------------------
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-------------------------------------------------------------------------ACAAGGC
CACCGGCTTGATCTTCCACACCAGATACTCGGATCT--------------------------------------------
---------------------------------------------GCTCGGGATCGTCAC--CAAGCACGTCGATCCTAG
ACCAAATGACTCCAACTGGTACGTAAGTATGGTGCATACTACCTCTGTCCTGGTTTAT----------------------
-------------------------------------TGGTCCCTTTATAATTTGTGCCAAATTTTAATCAAAGATTTAA
CTAATAAAATATTAGTGCATGTCAACAAAAAATATATCGTTGAATTTGTATTTGAATGTAATTTTTAATGATATAATTTT
TGGTGACATGCATAAATATTTTGTTAGTTAAATTTATGGTTAAAATTTGGCACGGAATACAATGAAGACCAATAAACCAG
GAGAGAGGTAGTACATACATACATACATACATACATACACACCTATTTTCTCTGCGCTCTTGTTAGTTAATCAGCAGTCT
TTTCTTTCATATGCATGCTTGCAGGCGGTGGTTTCGAGCCAAAGTGGTATTGTCCAATGGGTGCGCATGGTTGGTGAGTC
TGGGGTTCCTACATTGCATGTGCTTCCATGAT------CTGTTTGCTGCAAAAGAGACTCCCGCGGAAGAAGAAGAAAAT
GATGTAGATAAAGAGGAGTGATAAAA--TTTCATATATCTCGGTTGGTGTCAGGTCTTTAGTTGCTC-------------
---------------------------------------------TATATAGTTTATACATCATGTTTTTATCATTCAGG
TCTTTTCTGGAATGCAAGGGATCTAGGAGATCCTCACACAC---------------------------------------
---------AAACCTTTATTGCTAATTTTATTAGACATTATAA---------------------------CTTTAGTTTT
GTGGGCATA--TCTGAAAGTAAGAAGCAATCTTTTACATATATTATTTTAGACATAATTAGTGGTTATACTTATATTGAG
TGGATTTTTTGTCCTGCTACAGGTTAATTAACTGGTGGTATATTGCTGGGTGTTAATACTAATGCTTTTAAGGTATTAGA
-----AAATTAAGTTGGCATTTATTTTGTCAGAGCTCTGGTAAAACATTCAAACAAAACAATAACATTTGG---------
------------------------------------------------------------------------AGTTTGGG
TGCCG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--GCAATTGTATCAAGCGAGTCAACTCTTTGCAAGTCTTTTGTCTTTATTTTGTATCATTTTGTATGGATAGGTACTGAT
CGAACAGCTGTACGCAGCGTGCTAGCCAAGCCCCTTCTTGCTAAGACTTGATCTGGTCTCTATGGCTTGTACTTTGTTAG
A-------------------------------------------------------------------------------
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----------TATGTTAAGAGAGCTCAGTTAGAAAAA-------------------------------------------
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----------------------------------------------TTAGTAACCGAAACTTTGCTGAAGTTTTAGCGAT
TCAACTCTATGGCAATTGGCAAGTCATCCCACCAAAAAAAAAAACTCTATGCGATGTCTTTGTCGGTCTTCATTTTCTAT
ACATGCATCAGTAATGAACAGTTGTAGCTTCTTCTTGCTGAGACTTGATCCAGTCTTTATCGCTTCTATATAGTATTTTG
CTTGCATATACTGATAGCGAGCCGCATATGCTAATGAATCTCTTCGTGCATGATTTACGAAGTTATAGGAAGGATCAAAG
GATGATTACCTTTTGATTAATGATAGTTGTCTAAACTAACTATTTGCCGAGTTTACTGTCCACAACCCTCCGTCCAAATA
TTGTGCAGAAAGCACCACTTATTATCATGACTGTCCACATTACCCACTTTGCCAAAGTC
>chr1D_1
ATATATAGCAATAATGCGTATAGAAAAAAGAAACCCAAGAGAGAAGGGACAACCAATGATAAACAATAAAGGAAGAAACA
AACCCGAAGAAAATGATAGAAAAGAAAAGTTAAGGAAAAAATTAGTAAAAACCAAGAAAGTAATAAAGAAAACTTTTGAA
AAACAATGAAATAAGAAAAGAAAAGAACCTGTGAAAATAGAAAAAAAAACAGAGAAAAACTGTGGAAAAACAAAAGAAAA
AACTTAAGAAAAAGGGCCGGAAACCCAGCGGAAAAACTGGCTGGTTTCGCATCAAGTAGGTAGCTCTCCTACTATTTAAG
TGCATCTCGAACAGACGCACAAAAACTGCTCCGCGCGCTAAAATTTTGGTTTTTT-GGCGCCGAACAGCTCTAGCGGAAA
CTATAAAATAGTGCACGCACAAAAAAGGATGGGGAACGCGCTAAAAATCGCTATTAAAAGCTGCAAATTTGGGGCACCGG
ATTACGCACGCTTCACAATTTGCGCTGCGTGTTTTTTGTACACACTTTTTTGACATCTGCTAAACCAATGTTTGGTCCGG
CGCGCTAAAAATGCTACAGTGACGCACATAAACTATTTTAGCATGCGAAATTTTTGTGCGCCTGTTGAAGATGCTCTAAC
ACCAACCGGCTGCAGCGCGGAATTATCAAAAAAAAAAAAACCGGATGCAGCGCCGGGCGTCTTAGGAGACCAGGGTTCCA
TCCCTTGCGCGCTCCCCTTTTCCTTCTCTTAGTTCATTTAACTGTGCGAGAATGGGCCAACCCACCCAATTACTGTAGAC
GCTTCAGTGAGACTGAAGAAAAA---------------------------------------------------------
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--CTCGCTATAAGTGAGATATAGCCTTTTAATTTTTTGCACGNNNNNNNNNNAATGATAGAAAAGAAAAGTTAAGGAAAA
AATTAGTGAAAACCGAGAAAGTAATAAAGAAAACTTTTGAAAAACAATGAAATAAGAAAAGAAAAGAACCTGTGAAAATA
GAAAAAAAAAACCCAGAGAAAAACTGTGGAAAAACAAAAGAAAAAACTTAAGAAAAAAGGCCGGAAACCCAGCGGAAAAA
CTGGCTGGTTTCGCATCAAGTAGGTAGCTCTCCTACTATTTAAGTGCATCTCGAACAGACGCACAAAAACTGCTCCGCGC
GCTAAAATTTTGGTTTTTTGGGCGCCGAACAGCTCTAGCGGAAACTGTAAAATAGTGCACACACAAAAAAGGATGGGGAA
CGCGCTAAAAATCGCTATTAAAAGCTGCAAATTTGGGACACCGAATTACGCGCGCTTCACAATTTGCACTGCGTGTTTTT
TGTACACACTTTTTTGACATCTGCTAAACCAATGTTCGGTCCGGCGCACTAAAAATGCTACAGTGACGCACATAAACTAT
TTTAGCATGCGAAATTTTTGTGGGCCTGTTGAAGATGCTCTAACACCAACCGGCTGCAGCGCGGAATTAATTAAAAAAAA
ACCGGATGCAGCGCCGGGCGTCTTAGGAGACCAGGGTTCCATCCCTTGCGCGCTCCCCTTTTCCTTCTCTTAGTTCATTT
AACTGTGCGAGAATGGGCCAACCCACCCAATTACTGTAGACGCTTCAGTGAGACTGAAGGAAAACTCGCTATAAGTGAGA
TATAGCCTTTTAATTTTTTGCACGCGATGACATGGGCCGTCTGAGTCCGGTTCCGCGTTGTGCTAAACTTGGGCCCGTAA
CGCGTTAGAGTTCTCGAAACAAAAAGGGTGATCTCCCATCGATACAAGC-------CGAGGAAGGGGTACGTATCGTCAT
CGATCGATCATGACTGCGGCGCTTCGACTACAGGCGGCGGCGAGGATGCTCCAGCGATCTCCGGCGGAGCAACGGCTCCG
GCTGCCGCCACGGC-----------GCCGGTTCGCCGTCGTTCCCCTCCGCTGCTGCCGAGGTACGTACCTACATGCTCC
ATCATCTCAC------------------GACGTACTTTTCCTCATTAAAGCCTC--------ATACATGTACTCACTCGT
GTTGCGTTGCGTCCGTTGGTCACCAGAGGCTCTCGTTGGTGCAACTGCACGAGAGGCAGC------------AGGAGCTG
TACCCCGTGCTCCTCGAGCTAGACAAGAGAATACTAGGCAAACACC----------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------ACAAGGC
CACCGGCTTGATCTTCCACACCAGATACTCGGATCT--------------------------------------------
---------------------------------------------GCTCGGGATCGT--C--CAAGCACGTCGATCCTAG
ACCAAACGACTCCAACTGGTACGTAAGTATGGTACATACTACCTCTGTCCTGGTTTAT----------------------
-------------------------------------TGTTCCCTTTATAATTTGTGCCAAATTTTGATCAAAGATTTAA
CTAATAAAATGTTAATGCATGTCAACAAAAAAAATATTGTTGGATTTGTATTTGAATGTAATTTTTAATGACATAATTTT
TGGTGACATACATAAATATTTTGCTAGTTAAATTTATGGTCAAAATTTGACACAGAATACAATGAAGACCAATAAATCAG
GACAGAGGTAG--------TACATACATACATACATACACACCTATTTTCT-TGCGCTCTTGTTAGTTAATCAGTAGTCT
TTTCTTTCATATGCATGCTTGCAGGCGGTGGTTTCGAGCCAAAGTGATATTGTCCAATAGGTGCGCATGGTTGGTGAGTT
TGGGGTTCCTACATTGCATGTGCTTCCATGATTTCACCCTGTTTGCTGCAAAAGAGACTCCCGCGGAAGAAGAAGGAGAT
GATGTAGAGGAGGAGGAGGAGGGATAATTTTCATATATCTCGATTGGTGTCAGGTCTTTAGTTGCTC-------------
---------------------------------------------T--ATAGTTTATATATCATGTTTTTATCATTCAGG
TCTTTTCTGGAATGCAAGGGATCTAGGAGATCCTCACATGC---------------------------------------
---------AAACCTTTATTGCTAATTTTATTTGACA-------------------------------------------
------------CTGAAACTAAAAGGCAATCTTTTACATATATGTTTTTAAACAAAATTAGTGATTACACTAATTTTGAG
TGTATTTTTTGTCCC-----------------------------GCTGGGTGTTAATACTAATGCTTGTAAGGTATTAGA
TTCGAAAATGAAGTTGGCATTTATTTTGTTAGAGCTCTGGTAAAACATTCAAACAAAACAATAAAGTTTGG---------
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>chr5A_317
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----------------------------------------------------------------------------TAAG
AGCATCTCCAACAGGCGCACAAAAACTGCTCCGCGCGCTAAAATTTAGGTTTTTTGGGCGCCGGACAGCTCCAGCAGAAA
CTATAGAATAGTGCACACAC-AAAAAGGATTGGGCACGTGCTAAAAAACGCTCAG--AAGCTGCAAATTTGAGGCGCTGG
ATTACGCGCGCTTCACAATTTGCACTGCTTTTTTTTTGGCGCGTGTTTTTGGTCATCTGCTAAACCAATGTTGGGTCTGA
CACACTAAAATTGCTACAGTGGCGCGCTAAAACTATTTTAGCGCGCGAAATTTTTATGCACTTGTTGGAGATGCTCTAAC
GTTTGCTCTATCTCCAAAGAAGTTTCTAAAGGAAACCGACAGGACTGGGTCCGCCGGCGCTGTTTTCGGCCTGGGCCGGC
GAAAATCGGGTTCCTGGGG--------------------A------CGCGACTGGGCCGCTTTTT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGCGCCGACGTGAAAAAAACGCCTGGGGAGGCCTTCCTGGGGACGCGGCTGGAGA-----------
--TACCCTTAGCACCCTTGACCACAAACAGAAGGGCATGAGC--------------------------------------
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------------------------------------------------------------------TACCTAAATGCGAA
GGGAACCTCCCATGAATGACACCGAAGTTATGATTTTGTGCTTGGGAGCGTTGATGCGACCCCGCATGATAGTT------
--------------------------------------------------------------------------------
-------------------------------TACTAGGCAACACAGCTTTTACTTGCCTCACTTTTTATCTCCAAGGAAG
AAATGTGGCGACAGCTTTGTTTCATTCAGAGCCCCGCTTCGGTACACCCCATCACAAAATTGTGTGTTTGATACGTGCCT
CAATGCAAAGATTAGAAGAGATCAATGAATTATACCTTTTTCAGAATGAAAAGGCAATTAAATGCATAGTTTATTTGGAT
CTCTCATAGTCTGCGACCTACTTGAGGACCAAACTCATAACAAAGGGATCCTTGGCTGGTGAGTTCATATCAATGACTAC
CACCCAAGTCTCTTATAAAGAGCAAGGATTCCCTATGCAGAAGATGAATGTCTTATTTGTCATTTCTCTTGGTCTTCATA
TCATCCTATACCAGTTTGTGCATTATTTGTTGTGGCTGTAGGATTCAAACTTCATAGGCATAGGCATAGGCATAGAAGGC
GTCAGGAATAATCGTCAATGTAGCATGCACCCTTTTGTCTTCACAACCGTCGCGTATATCTCTGTTACTCTACAGCCATG
TTGTGGTTATGTGCGTCATAGTCAGAAAACCTCATGTGGTCATGCGCTCGTGATCGT--CATGGGAAGCTAGGTGGCTTG
CTAGAGTGTTGGGCAGATCACTTTCTAAGGTATCATGCCCCACCAATACTCCACAATGTTATAAGAAGTATCGGTGATGT
TCTCTGGGGCCGGAGGTAACAACCCCTTCCTCACAAATGCTCCCTTCATCCAACTCC-----------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------GAAGTAGAAGAAATT
GTATGAACAGAGGGAAAGACAGGGATCTGAGCACAATTTATACACAATGGCACCTAGATCAAGGTACATTACTGCATTCT
AAAGCTATTCGCTGAGATGAAGAAGCTGTTCTGTCTTTGTGTAATT--TTAGTTCAACCATGGGGTGTTTATCAATCAAT
CTGCACGTCTTTATTATGGCCCAATGCTTTTCAACAAGGTACCATATATATGTGTCCGAAAACTGAAATTTCTCAGTGTG
TTGTATTCGAACTCCTGAGTGACTATTTACTTTGGAACTTTAATATTAGTGTGACGAGTCTGGTGACGCGCTTCAGGTTT
TTCTTTTTT--TCTGAAGGAAACAA-------------------------------------------------------
------------------------------------------------------------AATGCATCTTCAGATTTATA
-----CATCCAAGTTTGAAATTATACCGTCACTAAATTGAATTTAAA---------------------------------
--------------------------------------ATTTCAGAATAGAAGACATAAAAACATCAATCGAAGATACTG
AGGGACCCTTTTGCGCTTTTTTTTTTCAAACTAAGCTCCAATGTGAAAAACAACACCAGAAATACTCATTGGTATGCATG
AAAGAGAAAACCTACAGTTTCTCATTCCCTCTCCATACATCCAATGTCTCATATAACAAGTGTATCGGTCAACAAGCAGC
AAGGATCAATGGTAAGCAGATGACCACCTGAAATTTGCACAGAACATGAACCCGGAGAAATCTTCAGTTGCGGCAATCAG
GTGCGAAGGCGTCAACCTTGACGAGTACTTGCAAGTTTTGTGGGGCAAGTTGCATCATTCCCAATGTGTTGCCTCGACCC
TCCCATCACC----------------------------------------------------------------------
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-----------------------------------------------------------------------------ATC
TCCAGATTGCGGATCGTGCAGTTACAGTACATCCTCAACAGAATGAGAGCACGGCGTATGGAATGAAAAGGAAGACTGCA
TACG----------------------------------------------------------------------------
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------------------------------------------GCGGCAGGGCGCAGGGTTCTTGTCCGATGCGTCCTCAT
TGCCATGCTAAGAGCATCTCCAACAGGCGCACAAAAACTGCTCCGCGCGCTAAAATTTAGGTTTTTTGGGCGCCGGACAG
CTCCAGCAAAAACTATAAAATAGTGCACACACAAAAAGGATTGGGCACGTGCTAAAAAACGCTCAGAAGCTGCAAATTTG
AGGCGCTGGATTACGCGCGCTTCACAATTTGCACTGCTTTTTTTTTGGCGCGTGTTTTTGGTCATCTGCTAAACCAATGT
TGGGTCTGACACACTAAAATTGCTACAGTGGCGCGCTAAAACTATTTTAGCGCGCGAAATTTTTATGCACTTGTTGGAGA
TGCTCTAAC-----------------------------------------------------------------------
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-----------------------------------------------------------
>chr1A_677
AAACG---------------------------------------------------------------------------
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-------------------------------------------GACGCAGCGCTGGGCGTCTTAGGAGACCAGGGTTCCA
CCCCTTGCGCGTTCCCTTTTTCCTTCTCTTATTTCATTTA------CGCGAATGGGCCAGCCCGACCGATTGCTGTAGAC
GCTTCAGTAAGACTGAAGAAAAA---------------------------------------------------------
--------------------------------------------------------------------------------
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--CTCGCTGTAAGCGAGATATAGCCTTT----------------------------------------------------
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----------TAATTCTTTGCACGGGATGACATGGGCCGTCTGACTCCGGTTCCACGTTGTGCTAAACTTGGGCCCGTAA
CGCGTTAGAGTTCTCGAAACAAAAAGGGTGATCTCCCATCGATACAAGC-------CGAGGAAGGGGTACGTATCGTCAT
CGATCGATCATGGC------------------GGCGGCGGCGAGGATGCTCCAGCGATCTCCGGCGGAGCAACGGCTCCG
GCTGCTGCCACGGCTCTTGCACGGCGCCGGTTCACCGTCGACCCCCTCGGCTGCTGCCGAGGTACGTACCTACATGCTCC
ATCATCTCACGAAACTAAAATAGACAAAGACGTACTTTTTCTCATTAATTAAAGCCTCGTATATACAAGTACTCACTCGT
GCTGCGTTGCGTCCGTTGGTCACCAGAGGCTCTCGTTGGTGCAACTGCACGACAGGCAGCAGGAGCTGTCAGAGGAGCTG
TACCCCGTGCTGCTCGAGCTAGACAAGAGAATACTAGGCAAACACC----------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------ACAAGGC
CACCGGCTTGATCTTCCACACCAGATACTCGGATCT--------------------------------------------
---------------------------------------------GCTCGGGATCGT--CACCAAGCACGTCGATCCTAG
ACCAAACGACTCCAACTGGTACATAAGTATGGTACATACTACCTCTGTCCTGGTTTAT----------------------
-------------------------------------TGGTCCCTTCATAATTTATGCCAAATTTTGATCAAAGATTTAA
ATAATAGAATGTTAATGCATGTCAACAAAAAATATATCGTTGGATTTGTATTTAAATTTAATTTTCAATAATATGAT---
-------ATGCATAAATATTTTGTTAGTTAAATTTATGGTCAAAATTTGGCACGAAATACAATGAAGACCAATAAACCAA
GAGAAAGATAG------------TACATACATACATACACACCTATTTTCTCTGCGCTCTTGTTAGTTAATCAGTAGTCT
TTTCTTTCATATGCATGCTTGCAGGCGGTGGTTTCGAGCCAAAGTGATATTGTCCAATGGGTGCGCATGGTTGGTGGGTC
TGGGTTTCCTACATTGCATGTGCTTCCATGAT------CTGCTTGCGGAA---------------GAAGAAGAAGAAAAT
GATGTAGATAAAGAGGAGTGATAAAA--TTTCATATATCTCGGTTGGTGTCAGGTCTTTAGTTGCTC-------------
---------------------------------------------TATATAGTTTATACATCATGTTTTTATCATTCAGG
TATTTTCTGGAATGCAAGGGATCTAGGAGATCCTCGCACAC---------------------------------------
---------AAACCTTTATTGCTAATTTTATTAGACATTATAA---------------------------CTTTAGTTTT
GTTGGTGTA--TCTGAAACTAAGAAGCAATCTTTTACATATATGTTTTTAAACATAATTAGTGATTATACTAAATTTGAG
TGTATTTTTTGTCCTGCCA-----------------------------GGTGTTAATACTAATGCTTTTAAGGTATTAGA
TTAGAAAATGAAGTTGGCATTTATTTTGTCAGAGCTCTGGTAAAACATTCGAACAAAACAATAACATTTGGAATATAGTA
TCTGTTTGTGGGTCTGCTCTGTGAGGAGAAAGATGTTTATGTTAGAGTGTAGAACAAAACAATAACAGTTGAAGTTTGGG
TGCCG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GCAATTGTATCAAGCGAGTCAACTCTTTGCAAGTCTTTTGTCTTTATTTTGTATCATTTTG-----------------
---------------------CTAGCTAAGCCCCTTCTTGCTAAGACTTGATCTGGTCTCTATGGCTTGTACTTTGTTAG
AGCAACTCTAGCAGACCCCGCATCCGGCCGGCCCGCAAAACGCGTTTGCGGTTCGTGGAAAACGGCCTTTGCGGGCTGGC
TCGGACCGCCGCAGATGCAGACCCCACATAACGGATCCGTAAAAAAAGATATTTGTGGAATATGCTCTTTTACGGGTCGG
CTTTGCGGGGTCTGGTATGGCGCAGCTACTCCCGGCCCGGAAAACCTAAATTTGATCCGACATAATGCATTTCTTTACTT
TTTCAACAACATTGGATACATAAGACGTCACCAAGTCTTTGCTAAAATAGCAAGTCCAAAGAAAACAAGAACCACAAGTA
TGCGTTTTAGAAGATTTCCAACTTCCATAACTCCTCCCACTAGTTGAAGCAATATCTTCTCTATGCATTCATTGTTGATC
TGCGGATTCTTGATCTTGCATTCTTCATTCTTCATCTTTGGTTCAAAAGAAGCAGACGTCGCTTCCCCTCTAGTTGCACA
TGCTGCATCATTACCTTTGATTCTACTAAGGAGTGCATCAACATCTATTAAGTTTCTTTCTATCAATAAATCAATGTATT
GACCTTCCCAAAACCAAAATGAGCATCCATC-------------------------------------------------
--------------------------------------------------------------------------------
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---------------------TTGGCGGTTATTTTGCGGGTCGAGGCGGGACGCGGGGTTTGCTAGAGTTGCTCTTAGGT
CTATTCCCATA-------------------------------------------------------------------AG
ATCAAGCATGTATGTTAAGAGAGCCCAGTTAGAAAAA-------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TTAGTAACT-AAACTTTGCTGAAGTTTTAGCGAT
TCAACTCTATGGCAA-------GTCATCCCATCAAAAAAAAAATCTATATGCGATGTCTTTGTTAGTCTTCATTTTGTAT
ACATGCATCAGTAATGAACAGTTGTAGCTTCTCCTTGCTGAGACTTGATCCAGTTTCTATCGCTTCTATATATTTTGCTT
G--GCATATCCTGATAG---------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr1A_679
--------------------------------------------------------------------------------
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---------------------------------------ACCGGATGCAGCTCTGGGCGTCTTAGGAGACCAGGGTTCCA
CCCCTTACGCGCTCCCCTTTTCATTCACTTATTTCATTTAACCGTGCGCGAATGGGCCAGCCCGACCGATTGCTGTAGAC
GCTTCAGTAAGACTGAAGAAAAAC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TCGCTGTGAGCGAGATATAGCCTTT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------TAATTCTCTGCACGCGATGACATGGGCCGTCTGACTCCGGTTCCACGTTGTGCTAAACTTGGGCCCGTAA
CGCGTTAGAGTTCTCGAAAC----------------CATCGATACAAGCCGAGGAGCGAGGAAGGGGTACGTATCGTCAT
CGATCGATCATGGCGGCGGCGCTTCGACTACAGGCGGCGGCGAGGATGCTCCAGCGATCTCCGGCGGAGCAACGGCTCCG
GCTGCTGCCACGGCTCTTGCACGGCGCCGGTTCACCGTCGACCCCCTCCGCTGCTGCCGAGGTACGTACCTACATGCTTC
TTCATCTCAC------------------GAAACTAAAT------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------TAGACAAAGACGTATTTTCTCTGCGCTCTTGTTAGTTAATCAGTAGTCT
TTTCTTTCATATGCATGCTTGCAGGCGGTGGTTTCGAGCCAAAGTGATATTGTCCAATGGGTGCGCATGGTTGGTGGGTC
TGGGTTTCCTACATTGCATGTGCTTCCATGAT------CTGCTTGCGGAA---------------GAAGAAGAAGAAAAT
GATGTAGATAAAGAGGAGTGATAAAA--TTTCATATATCTCGGTTGGTGTCAGGTCTTTAGTTGCTC-------------
---------------------------------------------TATATAGTTTATACATCATGTTTTTATCATTCAGC
TATTTTCTGGAATGCAAGGGATCTAGGAGATCCTCGCACAC---------------------------------------
---------AAACCTTTATTGCTAATTTTATTAGACATTATAA---------------------------CTTTAGTTTT
GTTGGTGTA--TCTGAAACTAAGAAGCAATCTTTTACATATATGTTTTTAAACATAATTAGTGATTATACTAAATTTGAG
TGTATTTTTTGTCCCGCCA-----------------------------GGTGTTAATACTAATGCTTTTAAGGTATTAGA
TTAGAAAATGAAGTTGGCATTTATTTTGTCAGAGCTCTGGTAAAACATTCGAACAAAACAATAACATTTGGAATATAGTA
TCTGTTTGTGGGTCTGCTCTGTGAGGAGAAAGATGTTTATGTTAGAGTGTAGAACAAAACAATAACAGTTGAAGTTTGGG
TGCCG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GCAATTGTATCAAGCGAGTCAACTCTTTGCAAGTCTTTTGTCTTTATTTTGTATCATTTTG-----------------
---------------------CTAGCTAAGCCCCTTCTTGCTAAGACTTGATCTGGTCTCTATGGCTTGTACTTTGTTAG
AGCAACTCTAGCAGACCCCGCATCCGGCCGGCCTGCAAAACGCGTTTGCGGTTCGTGGAAAACGGCCTTTGCGGGCTGGC
TCGGACCGCCGCAGATGCAGACCCCACATAACGGATTCGTAAAAAAAGATATTTGTGGAATATGCTCTTTTACGGGTCGG
CTTTGCGGGGTCTGGTCTGGCGCAGCTACTTCCGGCCCGAAAAACCTAAATTTGATCCAACATAATGCATTTCTTTGCTT
TTTCAACAACATTGGATACGTAAGACGTCACCAAGTCTTTGCTAAAATAGCAAGTCCAAAGAAAACAAGAACCACAAGTA
TGCGTTTTAGAAGATTTCCAACTTCCATAACTCCTCCCACTAGTTGAAGCAATATCTTCTCTATGCATTCATTGTTGATC
TGCGGATTCTTGATCTTGCATTCTTCATTCTTCATCTTTGGTTCAAAAGAAGCAGACGTCGCTTCCCCTCTAGTTGCACA
TGCTGCATCATTACCTTCGATTCTACTAAGGAGTGCATCAACATCTATTAAGTTTCTTTCTATCAATAAATCAATGTATT
GACCTTCCCAAAACCAAAATGAGCATCCATCTTCCTACACAAAAGAATGACCATGTTCGAAATGAAGATCCGCAATTGAA
CCAAAGAATGAGCTACCCAAGTGCATGTACCCCGTCGTTTTCGCATTTGAAGAACACCCATACGGGGTGCTTCGGCGCGG
CCGAAGTAAGCCGCAGCACTCTCCGCGTGCAGTCGTCGCACTGTATGAGCGGCAACGGCGAGCCACAGAGCTGCTGCGCG
AGCGTCGAGCCCGATGGACAGCCGGACGAATCCATGCCCGCAAATCGTTGGCGGCGCCGAGAGGACGAACCTGTCCCTGC
ATGCGGTGATGCGCCCTTACCGGGGCTGCGGGAGATGCTCCCCGACCACTCCATTGCTGGGCGCAGCCACCAGCGGGCGG
CAAAAGCCAAATCCAGCGGCCCCACGATGAAGTGTCGCAGATCCGCAAGTCCGACGGCACGCCAACGCGGAGGGGGGGGG
GGAAGTCTCATGCGCGTACCGGCCTTTCGGCGTGCTCCTGCCGGTGGCTTTGGCCGGAATCTTGGGCGGCGGCGCGAGGG
GAAGAGGAGAAGTGGTTGGTGGGGAAAGCGCGGGCTGAAATGTCCCCCCCCCCCACACCCACCAATCACTCCCGCTTATA
TGCAGGGCACCGCAGCCGCGAGGGGGAACCCCGCGTATTTTTGCGGGCCGGGGCGAGATGCGTGGTCTAATCGGGCATGT
TTTTTTACCCCGACCCGCATTTTGGCGGTTATTTTGCGGGTCGAGGCGGGACGCGGGGTTTGCTAGAGTTGCTCTTAGGC
ATATTCCCATA-------------------------------------------------------------------AG
ATCAAGCATGTATGTTAAGAGAGCTCAGTTAGAAAAA-------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TTAGTAACT-AAACTTTGCTGAAGTTTTAGCGAT
TCAACTCTATGGCAA-------GTCATCCCATCAAAAAAAAA-TCTATATGCGATGTCTTTGTTAGTCTTCATTTTGTAT
ACATGCATCAGTAATGAACAGTTGTAGCTTCTCCTTGCTGAGACTTGATCCAGTTTCTATCGCTTCTATATATTTTGCTT
G--GCATATCCTGATAG---------------------------------------------------------------
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>chr1D_722
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---CTTGCGCGTTCCCCTTTTCCTTCTCTTATTTCATTTAATCATGCGCGAATGGGCCAGCCCGCCCGATTACTGTAGAC
GCTTCAGTGAGACTGAAGAAAAACAAGCTATAAGTGAGATATAGCCTTTTAATTCTTTGCACGCGATGACATGGGCCGTC
TGAGTCCAGTTCGAGTTCTCGCGAGCGCACATTTTTTGAGCTTCTAAACAGAGAAACGCAGCTGCATGGGCCGGCCCACT
TGTAGCACGCTGCAGGCGCCGGTTTGCAGAAAACACTAGTAACCGGCGAATAGGATTCGCTCCTTGCGCGCTCCCCTTTT
CCTTCTCTTATTTCATTTAACCATGAGCGAATGGGCCAGCCCGCCCGATTACTGTAGGCGCTTCAGTGAAACTGAAGAAA
AACTCGCTATAAGTGAGATATAGCCTTT----------------------------------------------------
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----------TAATTCTTTGCACGCGATGACATGGGCCGTCCGAGTCCAATTCCATGTTGT-CTAAGCTTGGGCCCCTAA
TGCGTTAGAGTTCTCGAAGCAAAAAGGATAATCTCCCATCGATACAAGC-------CGAGGAAGGG--------------
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>chr1A_1718
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-------------------------------------------------------------GTTAGTTAATCAGTAGTCT
TTTCTTTCATATGCATGCTTGCAGGTGGTGGTTTCGAGCCAAAGTGATATTGTCCAATGGGTGCGCATGGTTGGTAAGTC
TGGGGTTCCTACATTGCATGTGCTTCCATGATTTCACCATGTTTGCTGCAAAAGAGACTCCCGCGGAAGAAGAAGATGAT
GATGTAGAGGAGGAGGAGGAGGGATAATTTTCATATATCTCGATTGGTGTCAGGTCTTTAGTTGCTC-------------
-----------------------------------------------TATAGTTTATACATCATGTTTTTATCATTCAGG
TCTTTTCTGGAATGCAAGGGATCTAGGAGATCCTCACACAC---------------------------------------
---------AAACCTTTATTGCTAATTTTATTTGACATTATAA---------------------------CTTTACTTTG
GTTGGTGTATCTCTGAAACTAAAAAGCAATCTTTTACATATATGTTTTTAAACAAAATTAGTGATCACACTAATTTTGAG
TGTATTTTTTGTCCC-----------------------------GCTGGGTGTTAATACTAATGCTTGTAAGGTATTAGA
TTCGAAAATGAAGTTGGCATTTATTTTGATAGTGCTCTGGTAAAACATTCAAACAAAACAAT------------------
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>SNPs
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-----------------------------------------------------------------------------S--
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---------------------------------------------------------SS---------------------
---------------------------------S----------------------------------------------
------------------------------------------------------------------S-------------
----------S---S---------------------------S-------------------------------------
----------------------------------------S---------------------------------------
-----------SSSSSSSS-------------------------------------------------------S-----
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
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--S--SS------------------------------------SS-----S------------S-------S--S-----
--S--------------S-SSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
---------S----------------------------------------------------------------------
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---------------------------------------------------------------SSSS-S-SSS-SSSSSS
SSSSSSSSSSSSSSSSSSSSS-----S-----------------------------------------------------
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---------------SSSSSSS---------S-----------S--S----------------SS-----------S---
--------------------------------S---------------------S-S---------------S-S-SS-S
SSS------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2318
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-------------------------------------------------------AAGCCTCATACATGTACTCACTT--
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>reverse_6337
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----------------TGGCAAGTCATCCCACCAAA--------------------------------------------
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-----------------------------------------------------------
