>input_sequence_65637
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AT
GGCGCGGGTGCTGGCTCTCGGCGCCGCCGCGGCTCTCCTCCTCCTGGCAGTGGCATCGACCATGGCGGCCGCGCAGAACT
GCGGGTGTGCCGCGACCGAGTGCTGCAGCCGCTGGGGGTTCTGCGGCACCACCGGCGAGTACTGCGGCACGGGCTGCCGC
TCGGGCCCCTGCACCGTGCCCGTCACCAACAACGTGTCCGTGCCCGCCATCGTCACGCCGGCCTTCTTCGGCGCGCTCGT
CGCCCAGGCCGCCGACGACTGCGCCGCCAAGGGCTTCTACACCCGCGACGCCTTCCTCACGGCGCTCGGCGGGTACCCCG
CCTTCGGCCGCACCGGCTCCGACGACGACTCCAAGCGGGAGATCGCCGCCTTCTTCGCCCACGTCAACCACGAGACCATA
AGTAAGCTCGCCGCGCACGCCGACTGGAACGTACTCCATCAGTTCACCACGCCT---------------------CCTGA
GTCCTGACCATGAGCTTG------TACTACGAAATGAATTGCAGAGTTCTGCTACATCGACGAGATCAACGGGCCGAGCA
AGAACTACTGTGACCCTACGAACGCGGAGTGGCCGTGCGCCGCCGGGAAGGGCTACTACGGCCGCGGGCCGCTGCAGATC
TCGTGGAACTACAACTACGGGGCGGCGGGACAGAGCCTCGGCTTCGACGGGCTCAACGACCCGGACGCCGTGGCGCGGAG
CCCCGTCTTGGCGTTCCAAGCGGCGTTCTGGTACTGGATGAACAGCGTGCACGACGTCATCGTCTCCGGCCAGGGGTTCG
GCGCCACCATCAGGGCCATCAACGGCGCGCTCGAGTGCAACGGCAAGAACCCCAGCGCCGTCAACGACCGCGTCGCCTTC
TACAAGCAGTTCTGCCAGCAGTTCGGCGTCGATCCGGGGACCAGACTCACCTGCTAA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---
>chr6B_1_TraesCS6B01G246800
GGCGCTCACAGAAACCTGTAATGGGTCGTGGCCCAAA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AAACTTCGCTCTCACCGCGAGAAGGAAAAGG
TTTTACATAGGTGGACTGC-----GAGTCGAACTCCAGTCGCCAGCGTCCATATCAATCACATTAACCAGCCGGCCAAAC
TTAGTTCGTTGATTGCTTGAAGAAACAGCTCTATTTGACACTTCTTTCCGTACAAACCTTAAAACATATACCAATATTAT
ATATCCTCTATAAATTATTTGAA-AAAAGAAAAGGTTGTACCAATTGAAAAAAATCGCAAAAATGGAAATAATTCATGAA
TTTGAAATATTCCATCGATTTTAAAAAAATCAGAATATTTGAAAGAAGTTCATTGAATTTAAAAAAAAAGTTCATCGGAT
TTGAAAAAAAAATCACTAGTGGTCGTCATCCCTCAAAAAAAAAAATCACTAGTGGTCGTCGCCTGTCGCATCAGGAAACC
CACGACCGTTCCCGGCGAGCTGCCGTCCAGATTTTTCTTTTCGTATCAATCTTGCTTGTACGTAACGGGGAAAGCAACCG
GTTGCTATTGCAATCGTGACGCCCTCTCCTCCACGGCAAAATGCAGCAGCCGGTTGCTTATTTTGGCTAGTCCGACATAT
TTTTAGGACGCTTCTCTTCTCTAGATGCTCGGGGAGTGTGTGGCTCGCAGGCTGCTCATCAT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ACTAATAAAAAAGAAAAAGAAAAA
GAAGAAAGAACGTGAAACGCAGGCTGCGTACGCTGCTGGAGTGAAGCTCGCAAGCGTAGACGCGGTTGACGTTCACGTAC
CAATTCGCAACGTGCACGCGACGACTGCAGTTTGACCAAGCCCTAGTTGGACTTGGAC-AAAAGGGTCAGACGCTCACAC
AAAGAGGTCATGTCAATCACTGCCCCCC-GCCATCCGGAGAACCCTATATAAACAGCAGCGAACCATCGGGAACTTGACA
TCGATCACACGGGC---------------TAGCCACAGAGCAACGAA---------CTCGAGTCATCAGCAACGAACCAT
GGCGCGGGTGCTGGCTCTCGGCGCCGCCGCGGCTCTCCTCCTCCTGGCAGTGGCATCGACCATGGCGGCCGCGCAGAACT
GCGGGTGTGCCGCGACCGAGTGCTGCAGCCGCTGGGGGTTCTGCGGCACCACCGGCGAGTACTGCGGCACGGGCTGCCGC
TCGGGCCCCTGCACCGTGCCCGTCACCAACAACGTGTCCGTGCCCGCCATCGTCACGCCGGCCTTCTTCGGCGCGCTCGT
CGCCCAGGCCGCCGACGACTGCGCCGCCAAGGGCTTCTACACCCGCGACGCCTTCCTCACGGCGCTCGGCGGGTACCCCG
CCTTCGGCCGCACCGGCTCCGACGACGACTCCAAGCGGGAGATCGCCGCCTTCTTCGCCCACGTCAACCACGAGACCATA
AGTAAGCTCGCCGCGCACGCCGACTGGAACGTACTCCATCAGTTCACCACGCCT---------------------CCTGA
GTCCTGACCATGAGCTTG------TACTACGAAATGAATTGCAGAGTTCTGCTACATCGACGAGATCAACGGGCCGAGCA
AGAACTACTGTGACCCTACGAACGCGGAGTGGCCGTGCGCCGCCGGGAAGGGCTACTACGGCCGCGGGCCGCTGCAGATC
TCGTGGAACTACAACTACGGGGCGGCGGGACAGAGCCTCGGCTTCGACGGGCTCAACGACCCGGACGCCGTGGCGCGGAG
CCCCGTCTTGGCGTTCCAAGCGGCGTTCTGGTACTGGATGAACAGCGTGCACGACGTCATCGTCTCCGGCCAGGGGTTCG
GCGCCACCATCAGGGCCATCAACGGCGCGCTCGAGTGCAACGGCAAGAACCCCAGCGCCGTCAACGACCGCGTCGCCTTC
TACAAGCAGTTCTGCCAGCAGTTCGGCGTCGATCCGGGGACCAGACTCACCTGCTAA----GCTCACTGTTTAGGACATC
TCGTCTACTTATTCTTGGTTGTTGCATATGTGCGTGCATCTGATTCGGACCGACATATTCAGGATAAAATTGCTTTCGGA
TTTGATACTATACTTGTTAATTGAGATAAATACGCTAGTGGTGCTTTTAACTTGTCAT------TCACTTTAGTGCCCTA
AACTCGAAAAATACACCGAACTGGTTCTAAAACTTGGCACGGACGTGCAAATACGGTGCTAATCA-ATCCGTAGACATAA
AATGCACCCACGT-------------------------------------------------------------------
-------------------------ATTATTATTTAAGTACTATATACGACTCTATGACT--------------------
--------------AATGAGCCCGCCCCTCAGTACATTGGAGAAATTAGTAAT------GAAAAAATGCGACGGACAGGA
ATCGAACAAGCAACCTATTGCCAGCCCACTAGTTGCGCTAGCCACTATACCAAGCACGTACTGAACATAAAAAAGGGCCA
CTTAATTTAT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATGAATTATTTATATTATACAAACATTGTTATAATTCATATATATTATTTCATGACTGTCTATTTTAAATAT
TCGTATATCATTGTTAAATATAACCCATGACTGTGTATTTTCAATTTTTGTTTACAAACAGTTTGAAACACTCATATATT
ATATTT-AAAATAGTTTTTTTCCAAATAATTAGTTAATATTTCTAAAATAAA-TTTTTTATCGCATACCTCTATATATTT
ATTTTGTGTGCACACAGATATTTTTTAGC-ATGAGGTAATTATAAATAACACATGAACACTTGAATCTAACTTTTATTAT
TA-GATTATTATTTACATTTAAAAAAA-TGTGTGCAGCATGGGCCACCTGGCTGAAGCCAATTTATGTACATAAGAGTTT
TTTTTTGTGGGGGGCCATAAGAGTTTTTTGTTTAAATACATAATAGCAGAGGGAGTATGTTTGTCAAAAAAGTACGTTGG
ATTAAGCGGCTAGCGCAAGCATCGCCCCAAGGGTCAGGTAACAGGTTCGACTCACGCAGTGCTCATTTTTATCTTAGTCA
GTA
>chr2D_1
GGCGCTCACAGAAACCCGTAATGGGCCGTCGCCCAAAAAACTTCGCTCTCACCGCGAGAAGGAAAAAGGTTTACATATAT
CGAGTGGACTTACTGTTCTCACCGCTGACGGCCGACTTACTGTTCTCGGATTGCCGCCGGAGGCTGCCGATCTGGCGCCC
CGATGGGAGAACATGGAAAGATGGTGGGGATGAGACACCGAAGGGGCCGAGAGAGCTCCTAATCAGCGCATTCGGCGCCC
GTTACGCGCGCTGGCGCTCACAGAAACCCGTAATGGGCCGTCGCCCAAAAAACTTCGCTCTCACCGCGAGAAGGAAAAAG
GTTTACATATATCGAGTGGACTAGGAGTCGAACTCCAGTCTCCAGCGTCCATATCAATCACGTTAACCAGCCGACCAAAC
TCAGTTCGTTGATCGCTTGAATAAACAGCTCTATTTGGCACTGCTTTCCGTACAAACCTTAAAACATATACCAGTATCAT
ATATCCTCTATAAATTATTTGAATAAAAGAAAAGGTTGTACCAATTTTAAAAAATCACAAAAATGGAAATAATTCGTGAA
TTTGAAATATTACATCGATTTTTAAAAAATCAGCATATTTGAAAGAAGTTA----------------------ATCGGAT
TTGAAAAAAA----------------------------------------------------------------------
--------------------------------------------------------------------------------
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---
>chr6A_427
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------ATCAGTATTGGCCGTCGCCTGTCGCATCAGGAAACC
CACGACCGTTCCCGGCGAGCTGCCGTCCAGCCTTTTCTTTTCGTATCAATTTTGCTTGTACGTAACGGGGAAAGCAACCG
GTTGCTATTGCAGTCGTGACGCCCTCTCCTCCACGGCAAAATGCAGCAGCCGGATGCTTATTTTGGCTAGTCCGACCTAT
TTTTAGGACGCTTCTCTTCTCTATATGCT-GGGGAGTCTGTGGCTCGCAGGCTGCTCATCAT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------AGAAAAA-----------------
----AAAGAACGTGAAACGCAGGCTGCGTACGCTGCTGGAGTGAAGCTCGCAAACGTAGACGCGGTTGACGTTCACGTAC
CAATTCGCAACGTGCACGCGCCGACTGCAGTTTGACCAAGCCCTCGTTGGACTTGGAAGAAAATGGTCAGACGCTCACAC
AAAGGGGTCACGTCAGTCACTCCCCCCGGGCCATCCGGAGAACCCTATATAAACAGCAGCGAACCATCGGAAGCTTGACA
TCGATCACACGGGC---------------TAGCCACAGAGCAACGAA---------CTCGGGTCATCAGCAACGAACCAT
GGCGCGGGTGCTGGCTCTCGGCGCCGCCGCGGCTTTCCTCCTCCTGGCAGTGGCATCGACCATGGCGGCCGCGCAGAACT
GCGGGTGCGCCGCGACCGAGTGCTGCAGCCGCTGGGGGTTCTGCGGCACCACCGGCGAGTACTGCGGCACGGGCTGCCGC
TCGGGCCCCTGCACCGTGCCCGTCACCAACAACGTGTCCGTGCCCGCCATCGTCACGCCGGCCTTCTTCGGCGCGCTCGT
CGCCCAGGCCGCCGACGACTGCGCCGCCAAGGGCTTCTACACCCGCGACGCCTTCCTCACGGCGCTCGGCGGCTACCCCG
CTTTCGGCCGCACCGGCTCCGACGACGACTCCAAGCGCGAGATCGCCGCCTTCTTCGCCCACGTCAACCACGAGACCATA
AGTAAGCTCACCACGCACGCCGAC----------------AGTTCACCACGCTTATATATATATATATATGTAGCCCCGA
GCCCTGACCATGATGAGCTTGTACTACTACGAAATGATTTGCAGAGTTCTGCTACATCGACGAGATCAACGGGCCGAGCA
AGAACTACTGCGACCCGACGAACGCGGAGTGGACGTGCGCCGCCGGGAAGGGCTACTACGGCCGCGGGCCGCTGCAGATC
TCGTGGAACTACAACTACGGGGCGGCGGGGCAGAGCCTCGGCTTCGACGGGCTCAACGACCCGGACGCGGTGGCGCGGAG
CCCCGTCCTGGCGTTCCAAGCGGCGCTCTGGTACTGGATGAACAGCGTGCACGACATCATCGTCTCCGGCCAGGGGTTCG
GCGCCACCATCAGGGCCATCAACGGCGCGCTCGAGTGCAACGGCAAGAACCCCAGCGCCGTCAACGACCGCGTCGCCTTC
TACAAGCAGTTCTGCCAGCAGTTCGGCGTCGACCCGGGGACCAGCCTCACCTGCTAATTAAGCTCACTGTTTAGGACATC
GCGTGGA------CTTGGTTGTGGCATATGTGCGTGCATCTGATTCGGACAGACATATTCAGGATAAGATTGCTTTCGGA
TTTGACACTATACTTCTTAATTTGATAA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>chr6D_427
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------ATCAGTAGTGGCCGTCGCCTGTCGCATCAGGAAACC
CACGGCCGTTCCCGGCGAGCTGCCGTCCAATTTTTTCTTTTCGTATCAATTTTGCTTGTACGTAACGGGGAAAGCAACCG
GTTGCTATTGCAATCGTGACGCCCTCTCCTCCACGGCAAAATGCAGCAGCCGGATGCTTATTTTGGCTAGTCCGACATAT
TTTTAGGACGCTTCTGTTCTCTAGATGCTGGGGGAGTGTGTGGCTCGCAGGCTGCTCGTCATCAAAAAGAAAAGGGGAAA
GTCTAAAATAAACCTTGAATTTGTACGCCAAGGCTGAATCAAACCTTGTACTTTTAATCCCTAAAATCAGCACTCTGATC
TTATTGATCCCGATTAATTCCGACCCTATTTTTGTTTGGCGCAACAGGAAAAGATCTGATCCCGGCCGGGATCACTTACT
ACTCTCGTGACCACACTGGCCCACTTGTTATATAATACTACATCTCTAGTCAATAGTCATTTGCTTAAAAATATCTGTCG
CTAGTCATTCTCTCTCTCATCTACACTACAGTTGCATCATCTTCCTCAGGGCGCGCGCGGAGGCAAACATCCAGACCGCA
CCCTCCACTCACTGGAGTAGCAATTGAGGATGCTGGAAAAATCAAAAGGACTCACGAATTACCAGGAACCTAATGTTGTG
GTAGAAATTCCGGTGAAGATGTGCAAATGGCCGGCGGTGAAAGTTTATGGTAGCGAGACGCTTCAGTTGAGCATGGTCGA
AATTAATTGAGCGTCAAGCCGTCAACAGAATTAGACTAAGAGCATCTTCAAATGCGCGCGAAATATTCGGCGCGCTAGAT
AAACCGCCAATTTGGCGCGCGAGAGGCCGCGCGGCGCGCTCCAGCAGACACGTGAAAGTTTGAGCGTGAAAAAGACGTGC
GCGCGGGGAAAAAGCGACAGCGCGCACGGCAGTTTTGGCACGCGTCGCCCAGTGTGCTGGTTAAAAGCCGCGCGCAGGCG
CCCACCGCCACTCTTTCCCTCCTGTCGCGCCTTCTTCCTTGCCTCCTCCAGCGCCCCGGGCGGCCTCGATCGCAGATGAA
CTTCACCGACTGTAGAATATGAAGTATAGGCTGTGCAAACACAATGCATTGATCGGTGCACCAGGCACGTATATATGAGT
ACAGAGAGGGACCACAACCTCGACTATACGAAGGAAACAGGAGGTGGGCTCAATACACAATATACACGTACACAATATAC
TCAACACCGACATGCGGACGCGCGAGCAGGCGCAGGAGCTCGCGCCTCCCCCGTGACTAATCAGCGACGAGGATCGGCGC
CTCCTCGTCGCCGAGGCGGACGAGCATGCCATGGCGGTGTAGCACGAGCGCTTCCCGCAGGATGTCACCGCCGAGAACGA
GTACTGCGCGCAGAGGAGGGCGGAGCGAGCCGTGCGTCTTCCTCACGGCGTCCCTCTAAGGAGGTAGAGGGGCGGTCCTC
TTCCTCTCGCCCGTCCGCGTGCTCCGGCAGTAGCTCGTGGATGCGCTTGCCGCGCTTGAGCCCAAGCCAGACTTGAACAA
TTTCTTCATGTGCTCCAAGGATGTCGTATGCGAGCTCAGAGTGCCTGCTGTGACTCGTAGCTTCAACGGCTTGCCTCATA
CATCTCCGTAGTAGTCTGGGCGCACAGGCTACACGCTAGCGTACGAGCTCACCTTGCACATGACAAAGAGATTAGGAAGA
AGACAATGTGTGCCATGGTCGTTGGTGAGAAAAATGTCTAATCCAGGTCGGGATTGTCTTTTCCCGCTTAGACAAACATG
TCCAGAATGGTGTAGGGTCGGGGATTAACCGGGATCGATAAGGTTAGGGTGCTGATTTCAAGGATTAATAGTTCAAGGTT
TGATTCAAACTTAGACTACGACTTTAAGGTTTATTTCAGACTTTTTCCAAAAGAAAAGAAAAA-----------------
----AAAGAACGTGAAACGCAGGCTGCGTACGCAGCTGGAGTGAAGCCCGCAAACGTAGACGCGGTTGACGTTCACGTAC
CAATTCACAACGTGCACGCGCCGACTGCAGTTTGACCAAGCCCTCGTTGGACTTGGAC-CAAAGGGTCAGACGCTCACAC
AAAGAGGTCATTTCAGTCACTGCCCCCC-GCCATCCGGAGAACCCTATATAAACAGCAGCGAGCCATCGGAAACTTGACA
TCGATCAAGGATCAGACGACACGAGCTAGTAGCCACAAAGCCAACGATCTCGACCGCTCGGGTCATCAGCAACGAACCAT
GGCGCGGGTGCTGGCTCTCGGCGCCGCCGCGGCTTTCCTCCTCCTGGCAGTGGCATCGACCATGGCGGCTGCGCAGAACT
GCGGGTGCGCGGCGAGTCAGTGCTGCAGCCGCTGGGGGTTCTGCGGCGCCACCAGCGAGTACTGCGGCACGGGCTGCCGC
TCGGGTCCCTGCACCGTGCCCGTCACCAACAACGTGTCCGTGCCCGCCATCGTCACGCCGGCCTTCTTCGGCGCGCTCGT
CGCCCAGGCCGCCGACGACTGCGCCGCCAAGGGCTTCTACACCCGCGACGCCTTCCTCACGGCGCTCGGCGGGTACCCCG
CCTTCGGCCGCACCGGCTCCGACGACGACTCCAAGCGCGAGATCGCCGCCTTCTTCGCCCACGTCAACCACGAGACCATA
AGTAAGCTCACCGCGCACGCCGAC----------------AGTTCACCACGCCTATATATGTAGT----------CCTGA
GCCCTGACAATGATGAGCTTGTACTACTACGAAATGAATTGCAGAGTTCTGCTACATCGACGAGATCAACGGGCCGAGCA
AGAACTACTGCGACCCGACGAACGCGGAGTGGCCGTGCGCCGCCGGGAAGGGCTACTACGGCCGCGGGCCGCTGCAGATC
TCGTGGAACTACAACTACGGGGCGGCAGGGCAGAGCCTCGGCTTCGACGGGCTCAACGACCCGGACGCGGTGGCGCGGAG
CCCCGTCTTGGCGTTCCAAGCGGCGCTCTGGTACTGGATGAACAGCGTGCACGACGTCATCGTCTCCGGCCAGGGGTTCG
GCGCCACCATCAGGGCCATCAATGGCGCGCTCGAGTGCAACGGCAAGAACCCCAGCGCCGTCAACGACCGCGTCGCCTTC
TACAAGCAGTTCTGCCAGCAGTTCGGCGTCGACCCGGGGACCAGCCTCACCTGCTAA----GCTCACTATCTAGGACATC
GCGTGGA------CTTGGTTGTGGCATATGTGCGTGCATCTGATTCGGACAGACATATTCAGGATAAAATTGCTTTCTGA
TTTGATACTATACCTGTTAATT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---
>chr1B_2034
--------------------------------------------------------------------------------
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----------------------GAGATAAGTACGCTAGTGGTG-TTTTAACTTGTCATGAATGTTCACTTTAGTGCCTG-
AACTCGAAAAATACACCGAACTGGTTCTAAAACTTGGTACGGACGTGCAAATACGGTGCTAATGACATCCGTAGACATAA
AATGCGCCTAGGTGGCACCGTATATGGATGATGTGGCAGTGACTAGTGGGGCCCAATTATAGTTTTTTTTTTGCATGGTG
GGCCCAATTGTAGCTAGGAAACAGAATTATTATTTGAGTACTCCTTCCGTCCAGAAATACTTGTCGCAGAAATGCATAAA
AATGAATGTATCTAAATGAGCCCGCCCGCCAGTACATTGGAGAAATTAGTAAT------GAAAAAATGCGACAGACAGGA
ATCGAACAAGCAACCTATTGCCAGCCCACTAGTTGCGCTAGCCACAATACCAAACACGTACTGAACGTAAAAAAGGGCCA
CTCAATTTAT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATGAATTATTTATATTATACAAACATTGTTATAATTCATATATATTATTTCATGACTGTTTATTTTAAATAT
TCATATATCATTGTTAAATATAATCCATGACTGTGTATTTTCAATTTTTGTTTACAAACAGTTTGAAACACTCATATATT
ATATTT-AAAATAG-TTTTTTCCAAATAATTAGTTAATATTTATAAAATAAT-TTTTTTATCGCATACCTCTCTATATTT
ATTTTGTGTGCACACATATATTTTTTAGC-ATGAGGTAATTATAAATAACACATGAACATTTGAATCTAACTTTTATTAT
TA-GATTATTATTTACATTTAAAAAAA-TGTGTGCAGCATGGGCCACCTGGCTGAAGCCAATTTATACACATAAGAG-TT
TTTTTTGTGGGGGGCCATAAGAGTTTTTTCTTTAAATACATAATAACAGAGGGACTATGTTTGTCAGAAAAGCACGTTGG
ATTAAGCGGCTAGCGCAAGCATCGCCC-AAGGGTCAGTTAACAGGTTCGACTCACGTAGTGCTCATTTTTATCTCTGTCA
GTA
>chr1A_2178
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------ATTATTACTTCAGTACTATATACAACTCTATAACT--------------------
--------------AGTGGGCCCACCTGTCAATACATTAGAAAAATTAATATGAAGAACGAAAAAATGCGACAAACAGGA
ATCAAACAAGCAACCGGATGACTGCCAGCTAGTTGCGCTAGCCACTATACCAAGCATGTACTTATTATTAAAATAGGCCA
CTCAATTTATATGTAGTTTAACTAAAAGTCTTGTGCCCATAATTTGGCTGCAGCCAGTGACCCATTTTGCACACGTTATT
TTTTTTAAAAAAAGTTGTGAAAAGCATATTACTACTAATCATAATAATAAATTGAAGATTCAAATATTCATGTGTCGGTA
ATAATTACGTCATGCTACACAAATATCTGTGTGCACAAAAAGTAAATATGTAGAGGAGTTTAATAAAATAACATACAAAA
AAATGTTCATGTAAGTTTTACAAATATTGACTTATTATTTAGAATATTTTTTAACTATAATACATGAGTGTTTAAAAATA
TTTGTAAATTAATTTTTTTAAATATGTGAATATTTATTCAAACCTTTGAATAATTGAGCGAATATTTACAAACGGTAATC
TAAAAGAAATGAATGATTTATATTATACAAACATTGCTATAATTCTTATATACTATTTCATGATTGTATATTTTAAATAT
-CGTATATCATTGTTAAATATAATCCATGACTGTGTATTTTTAATATTTGTTTACAAACAGGTTGAAACACTCATATATT
ATATTTAAAAATAG-TATTTTCCAAAAAAATAGTTAATATTTCTAAAACTAAGTTTTTTATCGCATACCTCTATATATTT
ATTTTGTGTGCACACCGATATTTGTGTATAATGAGGTAATTATTAATAACACATGAATATTCGAATCTAACTTTTATTAT
TATGATTATTATTTACATTTAAAAAAAATGTATGCAACATGGCCA--CTGGCTGCAGCCAATTTATGTACATAGGAG-TT
TTTTGTTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>SNPs
----------------S--------S---S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
S--------SS-S--S--S---------------------S--------------------S-----------S------
-S-----------S-------S---------------S----S------------------------------S---S--
----------------------------------------------SS--------S------------------S----
-----------S----------S----------S----------------SSSSSSSSSSSSSSSSSSSSSSS-------
----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S------S------------------------
------------------------------S-------------------S-----------------------------
-----------------------------------------------------S--------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------SS--S-SSSSSSSSSSSSSSSSS
SSSS-------------------------------------------------S--------------------------
--------------------S-----------------------S-----------------------------------
---------------S------------------------------------------------------S---------
------------------------------------------------------------S-------------------
----------------------------------S---------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
---------S--------------SSSSSSSSSSSSSSSS----------------------------------------
-S-----------SSSSS--------------------------------------------------------------
----------S-----S---------------------------------------------------------------
-----------------------------S--------------------------------------S-----------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------S-----------------------------------
S---SS-SSSSSS---------S---------------------------S-----------------------------
-----------------------------S-------------S---------------------------------SSS
-------------------------------------S-------------------------S----------------
-----S--S-S---------------------------------------------------------------------
-----------------------------------S--------------------S-----------------------
---------------------------S--------------------------------------------S-------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
-----------------------S--------------------------------------------------------
--------------S-----------------------------------------------------------------
-----------------------------------------------------------S--------------------
-----------------------------------------------------------------------------S--
-----------------------------S---------------S--------S-----------S-----S-------
---------------------------S---------S------------------S-----------------SS----
---
>forward_2618
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------TCGCAGGCTGCTCATCATAC----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---
>reverse_3885
--------------------------------------------------------------------------------
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--------------------------------------------ACTCACCTGCTAAGCTCACTG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>forward_3531
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------GGCCGAGCA
AGAACTACTGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_5398
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------GTAACAGGTTCGACTCACGC-----------------------
---
