>input_sequence_65624
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ATGACGGCGGGTCAGCCCCTCCGCGCCGACCCCCA
GCAGCGCCGCCACAGCCCGCCGGCCCTCCACCCCGCCGTGGTGCCGTCCTACCCGCCCCCGGAGTCCGGCAACGACGAGT
CCTGGGTCTGGTCCCAGATCAAGGCCGAGGCGCGCCGCGACGCCGACGCCGAGCCGGCGCTCGCGTCCTTCCTCTACGCC
ACCGTGCTCTCCCACCCCTCGCTCGAGCGCTCCCTCTCCTTCCACCTCGCCAACAAGCTCTGCTCCTCCACCCTCCTCTC
CACGCTCCTCTACGACCTCTTCGTCGGCTCCCTCGCCGCGCACCCCACCATCCGCGCCGCCGCCGTCGCCGACCTCCTCG
CCGTGCGCTCCCGGGACCCCGCCTGCGCCGGCTTCTCCCACTGCCTCCTCAACTACAAGGGCTTCCTCGCCGTCCAGGCC
CACCGCGTCGCGCACGTCCTCTGGGCGCAGAACCGCCGCGCCCTCGCGCTCGCGCTCCAGTCCCGGGTCGCCGAGGTCTT
CGCCGTCGACATCCACCCGGCCGCCGCCATCGGAAAGGGCGTCCTCCTGGACCACGCCACCGGCGTGGTCATCGGCGAGA
CGGCCGTCGTCGGCGACAACGTCTCCATCCTCCACCACGTCACGCTGGGCGGGACCGGCAAGGCGGTGGGCGACCGGCAC
CCCAAGATCGGGGACGGCGTTCTGATTGGCGCCGGGGCGACGATCCTGGGCAACGTGTTGATTGGCGCCGGGGCCAAGAT
CGGTGCCGGGTCGGTGGTGCTCATCGATGTGCCGCCGAGGAGCACCGCGGTGGGGAACCCCGCGAGGCTGATCGGCGGGA
AGAAGGGGGAC---------------GACATGCCTGGGGAGTCCATGGACCATACCTCCTTCATACAGCAGTGGTCAGAC
TACACCATTTGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr3D_1_TraesCS3D01G286900
TCCACCTCGCTTGCAGCATCGGCCATGGGATCGCTCGTCGCCCCCGCCGTATTTTGCAGTGAGAGCTTGCAGGCCATGGC
CGCCCCTAATTCTATGAGCTCGCATGCCATGGCTGAACCTCACATCAGCAGCATGACGTGTTTGGCGGAGAGCCCGTGGA
GCTTGTTGTAGGAGAGGTCGGGGAGGAGAGCCAAGAAGATTGGGCGGCGACGAGGTAGGAAAGTGAGAGAGGATACGATT
TGGATGTGGTATGGTGTGGGGAAAAGATAAGATAAGGGACGTCGTGCGGTGCGTGGGCCACTAGAGCGACCGGCTGAAAT
TTCAGCCGGCGTGCCGTCCCGAAACGTTCCTTTTTTTGTAAATGATACAATTGTGATTGAATAAAGGAGGAGATGATTTG
TCAAAAAAAGATTGGACAGCCGGATCTAGTGACCCGACCGATCTTTTTC-TCAAAAGATAAGCCGTCCGACGCGTAACAC
TTTGGTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TTT
TATTTGCGGAGAAGTCAGTGCCACCGTGTGTACGCTGCCCACA--------CCAGTCGTGTCGCCTTCGCTTGCTCTCGG
CAACTCGGGCTCGTGCTCTTCGTGTCGTGTGTACCACCTTAGTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCACCACGCTGGACGTG
GCTGTACTCG------CCCCGCGCCTATACATCCGTTCCGCCGACGGCACCCAAGACTCACGGCGCCCTCACAAGCCAAC
GGCCCAGACGCCATCGACGCGACGACGGCGACGACGACGACGACGATGACGGCGGGTCAGCCCCTCCGCGCCGACCCCCA
GCAGCGCCGCCACAGCCCGCCGGCCCTCCACCCCGCCGTGGTGCCGTCCTACCCGCCCCCGGAGTCCGGCAACGACGAGT
CCTGGGTCTGGTCCCAGATCAAGGCCGAGGCGCGCCGCGACGCCGACGCCGAGCCGGCGCTCGCGTCCTTCCTCTACGCC
ACCGTGCTCTCCCACCCCTCGCTCGAGCGCTCCCTCTCCTTCCACCTCGCCAACAAGCTCTGCTCCTCCACCCTCCTCTC
CACGCTCCTCTACGACCTCTTCGTCGGCTCCCTCGCCGCGCACCCCACCATCCGCGCCGCCGCCGTCGCCGACCTCCTCG
CCGTGCGCTCCCGGGACCCCGCCTGCGCCGGCTTCTCCCACTGCCTCCTCAACTACAAGGGCTTCCTCGCCGTCCAGGCC
CACCGCGTCGCGCACGTCCTCTGGGCGCAGAACCGCCGCGCCCTCGCGCTCGCGCTCCAGTCCCGGGTCGCCGAGGTCTT
CGCCGTCGACATCCACCCGGCCGCCGCCATCGGAAAGGGCGTCCTCCTGGACCACGCCACCGGCGTGGTCATCGGCGAGA
CGGCCGTCGTCGGCGACAACGTCTCCATCCTCCACCACGTCACGCTGGGCGGGACCGGCAAGGCGGTGGGCGACCGGCAC
CCCAAGATCGGGGACGGCGTTCTGATTGGCGCCGGGGCGACGATCCTGGGCAACGTGTTGATTGGCGCCGGGGCCAAGAT
CGGTGCCGGGTCGGTGGTGCTCATCGATGTGCCGCCGAGGAGCACCGCGGTGGGGAACCCCGCGAGGCTGATCGGCGGGA
AGAAGGGGGAC---------------GACATGCCTGGGGAGTCCATGGACCATACCTCCTTCATACAGCAGTGGTCAGAC
TACACCATTTGAGGCATTGAGCAGAGCAAGATGCCACTGTCCTCCTCTGTAACCTGCAATACTAATGCCCAGTCACGTCC
CTTTCTTTCGAATAGTGAACTGGTGCTAGTCT--------TTCTTACTGTAAGATCTGTCTCCGATGAGGAGAAGGTGAA
CCATACCGTACATTGCCTGCTCAACCCCGGACAAATGTACTGAACTGAAAGTTCACCCTGTACCTGTAATTTTGCGGGAT
GCAATGGTCATTACTCAGGTT-GCATCCTCGA-GGCTTTGTAATACTCGCATACATAATTTTGACGACATAGTTGCTGTT
GGTACTTGGTACAAATCAAATATGCTCGTCTCTATCCTCCACAATGTACTGAAACTTCTTTCTGCAATTCCA-AATTCCA
AAGAGAAGGTGAGAGCTTCTGTACCTGCTTGTCTATCTCAATATAGTAAATCTAC-TGCAATTTTTTGTTGGTAGCTTAC
CAAACTAGCCGTCGTTGGCCCCTTGGTATCTCAATATATATTGAACCTTG------------------------------
--------------------------------------------------------------------------------
------ATAAGTGTCACACGTCAGGTACGAGCACATGGCTACTTCGAACGTTTTCGACAGCAAGTTTAGTGATGCGGGGA
TGACAACTTTAGTTGCAGAGCATGGCAACTTTTGTGCTTCAGTTTACTTTTGATATAAACTTGCCGTCTGTCACTGAAAA
TTGCCATCCTGCCGTGACTGAAATTGCCATCGAAAAACGTTAGGTCCGAAGTGCCACGCACCTGACGTGTGGCACTTATC
ATTTAGGTATATTTTCAGATGTGTCGTTTTCTTTGAAGACATTGGAAACACCAAAGTCTCCATACAGGATGTA-------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CGAAATA
AAACAGATCAGGCATGAGATATACTTCAT-GAAAACCAGCAGCTAGTAGGTGGTAAACACTATAGCAGCACATTGTTTTA
ATTGTTTATAATA-AAAAAGCACATGGTTTTAGTTAATCCTGTGGGTGATTGGTACGGG---------ATCCTTGCGTGT
TCACACGAAGTGCTAGGTTTTATATGCGTCC
>chr3A_409
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AGATTAGACAGCCGGATCTCATGACGGGACCGATCTTTTTTTTCAATAGATAAGCCGGCCGACGCGTAACAC
TCA--TT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TTT
TATTTGCGGAGAAGTCAGCGCCACCGTGTGTACGCCAGTCGCCACCCACACCCAGTCGTGTCGCCTTCGCTTGCTCTCGG
CAACTCGGGCTCGCGCTCTTCGTGTCGTGTGTACCACCTTAGGTTGGGCCCCGGTCGGAGATAAGTTCCCATTCCATTGG
CTGCTGGCTGCCTGGTCCACCA----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CC--CTGGACGTG
GCTGTGCTCGCCCCGCCCCCGCGCCTATACATCCGTTCCGCCGACGGCACCCAAGACTCACCGCGCCCTCACAAGCCAAC
GGCCCAGACGCCATCGACGCGACGACGG------CGACGACGACGATGACGGCGGGTCAGCCCCTCCGCGCCGATCCCCA
GCAGCGCCGCCACAGCCCGCCGGCCCTCCACCCCGCCCTCGTGCCGTCCTACCCGCCCCCGGAGTCCGACAACGACGAGT
CCTGGGTCTGGTCCCAGATCAAGGCCGAGGCGCGCCGCGACGCCGACGCCGAGCCGGCGCTCGCCTCCTTCCTCTACGCC
ACCGTGCTCTCCCACCCGTCCCTCGAGCGCTCCCTCTCCTTCCACCTCGCCAACAAGCTCTGCTCCTCCACCCTCCTCTC
CACGCTCCTCTACGACCTCTTCGTCGGCTCCCTCGCCGCGCACCCCACCATCCGCGCCGCCGCCGTCGCCGACCTCCTTG
CCGTGCGCTCCCGGGACCCCGCCTGCGCCGGCTTCTCCCACTGCCTCCTCAACTACAAGGGCTTCCTCGCCGTCCAGGCC
CACCGCGTCGCGCACGTGCTCTGGGCGCAGAACCGCCGCGCCCTCGCGCTCGCGCTCCAGTCCCGGGTCGCCGAGGTCTT
CGCCGTCGACATCCACCCGGCCGCCGCCATCGGCAAGGGCGTCCTCCTGGACCACGCCACCGGCGTCGTCATCGGCGAGA
CGGCCGTCGTCGGCGACAACGTCTCCATCCTCCACCACGTGACGCTGGGCGGGACCGGCAAGGCGGTGGGCGACCGGCAC
CCCAAGATCGGGGACGGCGTTCTGATTGGCGCCGGGGCGACGATCCTGGGCAACGTGCTGATTGGCGCCGGGGCCAAGAT
CGGTGCGGGGTCGGTGGTGCTCATCGATGTGCCGCCGAGGAGCACCGCGGTGGGGAACCCCGCGAGGCTGATCGGCGGGA
AGAAGGGGGAC---------------GACATGCCTGGGGAGTCCATGGACCATACCTCCTTCATACAGCAGTGGTCAGAC
TACACCATTTGAGGCATTGAGCAGAGCAAGATACCACTGTCCTCCTCTGTAACCCGCAATACTAATGCCCAGTCACGTCC
ATTTCTTTCGAATAGTGAACTGGTGCTAGTCT--------TTCTTACTGTAAGATCTGTCTCCTATGAGGAGAATG----
----------------------CAGCCCCGGCAAATGTACTGAACTGGAAGTTTACCCTGTAACAGTAATTTAA-GAGAT
GCAATGGTTATTACTCACGTT-GCATCCTCGAGGGCTTTGTAATACTCGCATACATAATTTTGACGACATAGTTGCTGTT
GGTACTTGGTACAAATCAAAT-TGCTCATCTCCATCCTCCACAATGTACTGAAAGTTCTTTCTGCAATTCCA-AATTCCA
AAGAGAAGGTGAGAACTTATGTACCTGCTTGTCTCCCTCAATATTATTTAATCGATTGCAATTTTTTGTTGGTAGCTTAC
CAAGCTGGCCGTTGGCTGCA---TGGTCTCTCAATATATATTGGATCCTG------------------------------
--------------------------------------------------------------------------------
------ATAAGTGTCACTCGCCAGCTACGAGCACATGGCAACTTCGATCGTTTTAGACGGCAAGTTTAGTGACGCGAGGA
TGACAACTTTAGTTGCAAAGCATGCCAACTTTCGTGCTTTAGTTTATTTTTGACAGAAACTTGCCGTTTGTCACTGAAAA
TTGTCATCCTTGCGTGGCTGAAATTGCCATCAAAAAATGTTAGGTCCGCAGTGTCACGCATCTGATATGTGGCACTTCTC
ATTAAGGTATATTTTCAGAAGTGTCGTTTTCTTTGGAGAAATTGGGAACACCAAAGTCTCCACACAGGATGTG-------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CGAAATA
AAACAGATCAGGCATGAGATATACTTCAAAGAAAACTAGCAGCTAGTAGGTGGTAAACACTATAGCAGCACATTGTTTTA
ATTGTTTATAATAGAAAAAGCACATGGTTTTAGTTAATCCTGTGGGTGATTGGTACGGG---------ATCCTTGAGTGT
TGACACGAAGTGCTAGGTTTTATATGCCTCC
>chr3B_409
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AGATTACACAGCCGGATCTCATGACCCGACCGATC--TTTTTTCAAAAGATAAGCCGTCCGACGCGTAACAC
TCA--TTTTTTATTGGGAAACGATTGGGCGCGGTGCGCCGGCCGAACTTTGGGCCGGTCGCATCCACGCGCGCTTTGCTC
CAGCCACCCACCAGGCGACACGTAGACATGGGGGCCACCAAACGTTATCCTTTCTGCTTTCTTCCACCTCGCGCGGATCT
CGCCCCACAACGCATGCATCTCTCGCCTCCCCTGATGCAGCACGTGAGCACTCGCCGTCGGCCATGGATGAGCTTGGAAG
ATCGAAGTCCCCGTCGGGCCATGGTTGCAGCCCCGCTCGTGTTCCCACCTCCCCCTCTTCCTTCTTCCTCACTTCCTTTC
TCCTCCTCTTTCCCCCTTTTTTGCTGCAACCGGCGGCAGGCAAAACGTCGTGGAGGGGACCGAGGTGCCCCGTGCTACGA
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAGTTGCGAACAGAGGAAAAAGCTACAACCGTGTTTCCCCATGCTACAACCGTGGACGCAAAAAGCTACA
TCCAACAGATAAAAAAGCTTCAACCAAACAATGGAACAGAGGAAAAGTTACAACCGTTTTGACAAAAGCTTCAACCCGCA
GATGAAAAAGCTTCAACCAGAGATTAAGAAATCTTCAGCCGGGGGATTTTTTCGCAACCAAAATGTTGGACACAGAAAAA
GCTGCAACCCTTACAAAAAAAGCTTCAACCCTGGGTGAAAAAAGCTTCAATCGGCATGGCGGAAGTTTTAATGTGCGAAA
AAAGTTTCAACCGGCGTAGAGAAAAGCTGCAACCGATGATAGAAAAAGCTTCAACCCGACTCACCAATGGTGGCAAGCGG
CGAAGTTGAGAGCTGCACGGCGACACGACAAACGCAACGACGACGGCGGCTGATAGGTGCTGCAACGACAGAGGGGCTTC
GGCGTGCTTCAAGGCGGCGGCGTTTTTTGCTACAAGGGGGCAGCGACTTCCTGCTGGGGAACGCGAGGGGTGCTGCGACG
GCGACCGGCGGCGATGGGGACGAAGAGCGCATCCAGCAACATGGGACTGCGAGGGGGGGAAGAGGTCCAGGTGAGGGGAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCGGCGGCAGG
AGGCGGCCGGGGTGGGCGCGCGCGGAAGAAGAAGAAGAGAGAAGTCAACGCGGAGGGGAGAAGGCAGATCTGACGGCTTT
GGTTGGCTGCATCGGGCGGCTGGGACGCGACCGGCCGAAACGGTTCGGCCGGCGCGCGGGCGCCTAGCATCGCCCTTTTT
TATTTGCGAAGAAGTCAGCGCCACCGTGTGTACGCCACCCACA--------CCAGTCGTGTCGCCTTCGCTTGCTCTCGG
CAACTCGGGCTCGTGCTCTCCGTGTCGTGTGTACCACCTTAGGTTGGG-CCCGGTCGGAGATAAGTTTCCATTCCATTGG
CTGCCGACTGGCTGGTCCACCA----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CACGCTGGACGTG
CCTGTACTC------CCCCCGCGCCTATACATCCGTTCCGCCGACGGCACCCAATAGTCAC--CGCCCTCACAAGCCAAC
GGCCCAGACGCCATCGACGCGAC---------GACGACGACGACGATGACGGCGGGTCAGCCCCTCCGCGCCGATCCCCA
GCAGCGCCGCCACAGCCTGCCGGCCCTCCACCCCGCCGTCGTGCCTTCCTACCCGCCCCCGGAGTCCGACAACGACGAGT
CCTGGGTCTGGTCCCAGATCAAGGCCGAGGCGCGCCGCGACGCCGACGCCGAGCCGGCGCTCGCCTCCTTCCTCTACGCC
ACCGTGCTGTCTCACCCGTCGCTCGAGCGCTCCCTCTCCTTCCACCTCGCCAACAAGCTCTGCTCCTCCACCCTCCTCTC
CACGCTCCTCTACGACCTCTTCGTCGGCTCCCTCGCCGCGCACCCCACCATCCGCGCCGCCGCCGTCGCCGACCTCCTCG
CCGTGCGCTCACGGGATCCCGCCTGCGCCGGCTTCTCCCACTGCCTCCTCAACTACAAGGGCTTCCTCGCCGTCCAGGCC
CACCGCGTCGCGCACGTCCTCTGGGCGCAGAACCGCCGCGCCCTCGCGCTCGCGCTCCAGTCCCGGGTCGCCGAGGTCTT
CGCCGTCGACATCCACCCGGCCGCCGCCATCGGCAAGGGCATCCTCCTGGACCACGCCACCGGGGTCGTCATAGGCGAGA
CCGCCGTCGTCGGCGACAACGTCTCAATCCTCCACCACGTCACGCTGGGCGGGACCGGCAAGGCGGTGGGCGACCGGCAC
CCCAAGATCGGGGACGGTGTTCTGATTGGCGCCGGGGCGACGATCCTGGGCAACGTGCTGATTGGCGCCGGGGCCAAGAT
CGGTGCCGGGTCGGTGGTGCTCATCGATGTGCCGCCGAGGAGCACCGCGGTGGGGAACCCCGCAAGGCTGATCGGCGGGA
AGAAGGGCGAC---------------GACATGCCTGGGGAGTCCATGGACCATACCTCCTTCATACAGCAGTGGTCAGAC
TACACCATTTGAGACATTGAGCAGAGCAAGATGCCACTGTCCTCCTCTGTAACCTAT-----------------------
----------AATACTGAACTGGTGCTGGTCTCAAAGTTGTTCTTACTATAAGATCTGCCTCCGGTGAGGAGAA-GTGAA
CCATACCGTACATTGCCATGCTCAACCCCGACAAATGTACTGAACTGAAAG--CACCCTATACCTGTAATTTTGCGAGAT
GCAATGGTCATTATTCAGATTGGCATCCTTGA-GGTTTTGTAATACTCGCATAGATAGTTTTGAGGACATAGTTGCTGTT
GGTACTTGGAACAAATTAAAT-TGCTCGTGTCCGGACA----AATGTGCTGAAACTTCTTTCTTCAATTCCCGAATTCCA
AAGAGAAGGGGGGAGCTTCTGTACCTGCCTATC-----------------------------------------------
--------------------------TCTCTGAATATATTTTCAGATGCAGAATGACTAATTCATATCTAAATGTTATTT
AAAGATGTCACATCTAAATAGTTCATCACATAATAAGGTAATTCAAGATTTGTACAAAATATTTTCTTATTTTTTTCTAA
TGTTGTATAAGTGTCATGCTTAGATGTGGCATAGTTACGTCACATCTAGATGAGTCCTAACCACACCC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TTTCAGATGTGTCGTTTTCTTTGGA---------AACACCAAAGTCTCCATAGAGCATCTACGAAACA
GTGCTGCTATGCACACGATGTTGACGGACGATTTGTGGACGACAGCACTTATCAGATCGTCCATGCATAGCATCAAACCG
TAGTTGACGGCTGGATTGCCCGTCGTCTCACTGTCGTGCAAGCACGTTGTCGTCCACACAGCAGTTTCGTCTACGAAATA
AAACAGATCACGCATGTCATATACTTCAT-GAAAACTAGCAGCTAGTAGGTTGTAAACACTATAGCAGCACATTGTTTTA
CTAATTGCTAATA-AAAAAGCACATGGTTTTAGTTAGTCCTGTGGGTGATTGCCTGATTGGTACGGGAATCCTTGCGTGT
TCACACGAAGTGCTAGGTTCTGTATGCGTCC
>chr1A_1027
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CGGCCGCCA
GCACCCGCCGCCCGCCACGCCCGCGCTCCCGTCCGAGGTGGTGCCGGCCTACCCGCCGCCGGAGTCGGAGGACGACGAGT
CCTGGGTGTGGACGCAGATCAAGGCGGAGGCCCGGCGCGACGCGGACGCCGAGCCGGCGCTCGCCTCCTTCCTCTACGCC
ACGGTGCTCTCCCACCCCTCCCTGCCCCGCTCCCTCTCCTTCCACCTCGCCAACAAGCTCTGCTCCTCCACCCTCCTCTC
CACGCTCCTCTACGACCTCTTCCTCGCCTCCCTCACCGCGCACCCCTCCCTCCGCGCCGCCGTCGTCGCCGACCTCCTCG
CCGCGCGCGCCCGCGACCCCGCCTGCGTCGGCTTCTCCCACTGCCTCCTCAACTACAAGGGCTTCCTCGCCATCCAGGCG
CACCGCGTCGCGCACGTGCTCTGGGCGCAGAACCGCCGCCCCCTCGCGCTCGCCCTCCAGTCCCGCGTCGCCGACGTCTT
CGCCGTCGACATCCACCCCGCCGCCGTCGTCGGCAAGGCCATCCTCCTCGACCACGCCACCGGCGTCGTCATCGGGGAGA
CCGCCGTCGTCGGCGACAACGTCTCCATCCTCCACCACGTCACCCTCGGCGGGACCGGCAAGGCCGTCGGCGACCGCCAC
CCCAAGATTGGGGACGGGGTGCTCATAGGCGCCGGCGCCACCATCCTCGGCAACGTCATGATTGGAGCCGGGGCCAAGAT
TGGGGCTGGCTCCGTGGTGCTGATAGATGTGCCGGCGAGGAGCACCGCGGTGGGCAACCCTGCCAGGCTGATTGGAGGGA
GGAAGGGCGAGTCCGACAAGGACGAGGACATGCCCGGAGAGTCCATGGATCACACCTCCTTCATACGGCAGTGGTCCGAC
TACACCATCTGAGG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr1B_1029
ACCCC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CACCCGCCGCCCCCCACGCCCGCGCTCCCGTCCGAGGTGGTGCCGGCCTACCCGCCGCCGGAGTCGGAGGACGACGAGT
CCTGGGTGTGGACGCAGATCAAGGCGGAGGCCCGGCGCGACGCCGACGCCGAGCCGGCGCTCGCCTCCTTCCTCTACGCC
ACGGTGCTCTCCCACCCCTCCCTGCCCCGCTCCCTCTCCTTCCACCTCGCCAACAAGCTCTGCTCCTCCACCCTCCTCTC
CACGCTCCTCTACGACCTCTTCCTCGCCTCCCTCACCGCGCACCCCTCCCTCCGCGCCGCCGTCGTCGCCGACCTCCTCG
CCGCGCGCGCCCGCGACCCCGCCTGCGTCGGATTCTCCCACTGCCTCCTCAACTACAAGGGCTTCCTCGCCATCCAGGCG
CACCGCGTCGCGCACGTGCTCTGGGCGCAGAACCGCCGCCCGCTCGCGCTCGCCCTCCAGTCCCGCGTCGCCGACGTCTT
CGCCGTCGACATCCACCCCGCCGCCGTCGTCGGCAAGGCCATCCTCCTCGACCACGCCACCGGCGTCGTCATCGGGGAGA
CCGCCGTCGTCGGTGACAACGTCTCCATCCTCCACCACGTCACCCTGGGTGGGACTGGCAAGGCGGTCGGCGACCGCCAC
CCCAAGATTGGGGACGGCGTGCTCATAGGTGCCGGCGCCACAATCCTCGGCAACGTCATGATTGGAGCCGGGGCCAAGAT
TGGGGCTGGCTCCGTGGTGCTGATAGATGTGCCGGCGCGGAGCACGGCGGTGGGGAACCCTGCCAGGCTCATCGGAGGGA
GGAAGGGCGAGTCCGACAAGGACGAGGACATGCCCGGAGAGTCCATGGATCACACCTCCTTCATACGGCAGTGGTCCGAC
TACACCATCTGAG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr1D_1073
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GTGGTGCCGGCCTACCCGCCGCCGGAGTCGGAGGACGACGAGT
CCTGGGTGTGGACGCAGATCAAGGCGGAGGCCCGGCGCGACGCGGACGCCGAGCCGGCGCTCGCCTCCTTCCTCTACGCC
ACGGTGCTCTCCCACCCCTCCCTGCCCCGCTCCCTCTCCTTCCACCTCGCCAACAAGCTCTGCTCCTCCACCCTCCTCTC
CACGCTCCTCTACGACCTCTTCCTCGCCTCCCTCACCGCGCACCCCTCCCTCCGCGCCGCCGTCGTCGCCGACCTCCTCG
CCGCGCGCGCCCGCGACCCCGCCTGCGTCGGATTCTCCCACTGCCTCCTCAACTACAAGGGCTTCCTCGCCATCCAGGCG
CACCGCGTCGCGCACGTGCTCTGGGCGCAGAACCGCCGCCCCCTCGCGCTCGCCCTCCAGTCCCGCGTCGCCGATGTCTT
CGCCGTCGACATCCACCCCGCCGCCGTCGTCGGCAAGGCCATCCTCCTCGACCACGCCACCGGCGTCGTCATCGGCGAGA
CCGCCGTCGTCGGCGACAACGTCTCCATCCTCCACCACGTCACCCTGGGCGGGACCGGCAAGGCGGTCGGCGACCGCCAC
CCCAAGATTGGGGACGGTGTGCTCATAGGCGCCGGCGCTACCATCCTCGGCAACGTCATGATTGGAGCCGGGGCCAAGAT
TGGGGCTGGCTCCGTGGTGCTGATAGATGTGCCGGCGAGGAGCACGGCGGTGGGCAACCCTGCCAGGCTGATTGGAGGGA
GGAAGGGCGATTCCGACAAGGACGAGGACATGCCCGGAGAGTCCATGGATCACACCTCCTTCATAAGGCAGTGGTCCGAC
TACACCATCTGAG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>SNPs
S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS-----S-------------SS-------------------S-------------------------------
-SSSS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S----------------SS-------------------------------------------
------------------------------------------S--SSSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
-------------------------------------------------------------S------------------
----------------------------SSSS------------------------------------------------
--------------------------------------------------------------------S-----------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S--------------------------------S-------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------S-----
-----------------SSSSSS-S---S-----------------------------------------------S---
--------------------------------------------------------------------------------
---------------------S----------S-----------------------------------------------
----------------------------------SS--------SS-SS-SSSSS-------------------------
---S--S-----S-SSS--SSSS----S-----------------S-S--------------------------------
--------------------------------------------------------------------------------
-----------------S------S-----------------------------S-----------------S---S---
-----------------S------S-------S------S------S------S-S-----------S------------
---S------SS----S--------------S-----S----------S----S------S----SS----------S--
---S-------------------------------S---S-----S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>forward_185
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TTGTAGGAGAGGTCGGGGAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_3698
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TGCTCAACCCCGGACAAATG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
