>input_sequence_65611
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----AAAGGTTTC----TTCCACATTTCCACTGAGCAAAGAGAAGCAAATCGGCAGAGAGCGAAGCAAACCGGC----GG
TTCCTGGCCCCTCGCCATGGCCGGCAAAGCTAGGGTGTTCATGTGCGTGGCGCTCGTCGTCCTCCTGCTCCTTGTCGAGG
TGACCACCTAATCCATGGCGTTAA--GACTCTCCCACAATACATGCATGTTATG-----TTTGGTTGCCTAGCTAAACTC
TGCCCTTGTTCATTTTCGTCTTCCGCAGACCACCGCTCCGAGTGGACAAGCTCACGCCGTCGGTAAGCACCCACGCACGC
AT----G----GGATTCATCCGCTAATCCGGCCGAGTTGATCGATCGGCACCATC-------ACTGATATATCTC--CCC
TTCTAACTATTACAACGATTTGCAGATTGCGGCAGCGCGTGCTCGTACCGGTGCAGCAAGTCGAGCCGGCCGAATCTGTG
CAACAGGGCGTGCAACACGTGCTGCCGGCGATGCGACTGCGTGCCGCCCGGCACCGCCGGCAACGAGGACGTCTGCCCCT
GCTACGCCCACATGACCACGCACGACGGCCGCCACAAGTGCCCATGATCCAACCG--C-CTTCTC-----GACGACCGAT
CGAGGCTAATGCATGCTCGAT---CATGGCGTCTCAGTTAATATCCCATCAAGCTAGCTACAACCAACGATAACT---AG
ACTACCAGTGGCACGATCGATATGATATCATG--TACTCAAGCTAGTGCTGCTACC----------TATCTACCTTGTGC
TCATCCATT-----CGTGATTGATCCATCGTGTAAGC---ATGTTTGCTATCTCATTCTCACGCAGTGGTAATTGCTGTC
AATTGCACTAAAACAATTAGTACTCATGGTATTGTATTCATACTTCAGCCAACTCATATAAAAGTCTGAACTGATGGAAA
GAGGCGGACAATATATATATAT----------------------------------------------------------
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>chr1D_1_TraesCS1D01G270100
TAGCGAAACATGCCCTTTCTCTTGGGGGTGGTCGCCATGTTTGGTTAGGTCATCCCGGAGATCTTTCATTCATCCCTGTA
AATATTATGACGGGTTAATAAAGGTTTCGCGAGGTTGTCCAAAAAAACCAAATGTCTGTGAAGCAATCTGGGCGTCTGAA
TTCCTATAAATCGATAACAAACGTGGAAGTGGTTTGAAGGAATTCTGACACACTATGATG-AGCCTTGGATCCACTATAA
ATCCACATTTTCCTCCTCCG---TTCTCTCTCATCTCTTCATTGGACAAGAGGCGAACATTTTGTGCACCGGATTGGATG
GCAGCCCACTTATCCGCTGCCGGCGGATACTTCCGGACTGTCCTTTTTGAGGTACACCGCTGGAGATGCCCTAAGTCATG
CAGGTGTACTCCCTCTGCTTTTATTTACTTTGCATATTAGCTTTGTCTTTTGTCAAACTTTCTAAACTTTAACCAAGTTT
ATAAAAAAAGTAATTTAACATCCACAATACCCAATCAATAACATTAGAATCAGTTCAACATATT--TTCATACCATATTT
TTTTTATTGTGAGAGTTTAGATTGTTTTTGATAAACTTGATCAAACTTTATAAAATTGCACTTAGGTCAAACCTAATATA
TGCAGTAAATAAAAACGGAGGAGGATTTTCATGAGAGCGTCAG--TGTGTGCACTCACGGAGTGTAACAAGCTTACACAC
GTACAGTACAGAGCCTCACTGAAACGGACAAATGTATATGTC--------CAGTGATCAGGACGACAGAGTGAGGACAGA
CTTGGCCAAATTGATGGACGCAACGTGTGGCACTCCGCATGCAACTTGTGTGATACGTGGAGAGCCAGGAGCCCAACACG
GAACCAGGGACAGGGGGCGTGCACTCACGCGCATGCAGAGCTTGTGCTGC----GTGCCACCACTGTGCGCCTAGTGCGA
GTCTCGAGTCCTCACCGCT------GCCTAT---------------AAAACGTGGCCCTCGA---CCCCTCCGCTAGCAA
AGGCAAAGGTTTC----TTCCACATTTCCACTGAGCAAAGAGAAGCAAATCGGCAGAGAGCGAAGCAAACCGGC----GG
TTCCTGGCCCCTCGCCATGGCCGGCAAAGCTAGGGTGTTCATGTGCGTGGCGCTCGTCGTCCTCCTGCTCCTTGTCGAGG
TGACCACCTAATCCATGGCGTTAA--GACTCTCCCACAATACATGCATGTTATG-----TTTGGTTGCCTAGCTAAACTC
TGCCCTTGTTCATTTTCGTCTTCCGCAGACCACCGCTCCGAGTGGACAAGCTCACGCCGTCGGTAAGCACCCACGCACGC
AT----G----GGATTCATCCGCTAATCCGGCCGAGTTGATCGATCGGCACCATC-------ACTGATATATCTC--CCC
TTCTAACTATTACAACGATTTGCAGATTGCGGCAGCGCGTGCTCGTACCGGTGCAGCAAGTCGAGCCGGCCGAATCTGTG
CAACAGGGCGTGCAACACGTGCTGCCGGCGATGCGACTGCGTGCCGCCCGGCACCGCCGGCAACGAGGACGTCTGCCCCT
GCTACGCCCACATGACCACGCACGACGGCCGCCACAAGTGCCCATGATCCAACCG--C-CTTCTC-----GACGACCGAT
CGAGGCTAATGCATGCTCGAT---CATGGCGTCTCAGTTAATATCCCATCAAGCTAGCTACAACCAACGATAACT---AG
ACTACCAGTGGCACGATCGATATGATATCATG--TACTCAAGCTAGTGCTGCTACC----------TATCTACCTTGTGC
TCATCCATT-----CGTGATTGATCCATCGTGTAAGC---ATGTTTGCTATCTCATTCTCACGCAGTGGTAATTGCTGTC
AATTGCACTAAAACAATTAGTACTCATGGTATTGTATTCATACTTCAGCCAACTCATATAAAAGTCTGAACTGATGGAAA
GAGGCGGACAATATATATATATACACACACACCTTTCTCCCTCACGTCTAGACTTATTTACTTAGACTTATTTACTCCTT
AGCCGTAGGATTTATCTAGATCGCAGAATTGTTTTTTTAATACTGCGTTGGCAGGGTCTGAACACAAGACCTCCCGGCTC
TGATATCATATTGAATTCATGCTTCAGTCAACTCATCCAAAAGTCTGAACTGATGGAGAAAGGCGGATAATATATTTCAA
CACATATTCATATGTGCACGTGAGTATGCGCATCGTGTTCGTGCACGTG-------------------------------
-----------TGTAGCGATGTGCTCATAGTCCTCGTCAAGTCCTTTGAGGGTGTTGTGGACGAGTTGTTCGTCGGTGAC
GGGAGC-GTCAACCACCATCTTCTGCTTGTGGCAGTAGTTGGTGATGGAGCATTCGCCATGGAGCATTCGCCATGCTGGA
GGTTGCGGAATTCTTTGCTGAGGTACATGGCGCGTGCCTTTTGGTAGTCGCGGAAGAGGGTGATGATGCTCATCCAGACC
GCTATAGTCTCCCCTTCCATCACCGGGTCGAGGATGTCGAAGGAGATGGAGCCTGTCGAGGATGTCGAAGGAGATGGAGC
CTTACAGGCAGTGAAGGACGATGGCGTCGAGGCGGAGCCGTTCTTCGTCATTGGCGGGAGGGACCTCCATGTCGAGATGA
TCCACGAGCTCGTATTGGGTGATGACAATGCGGAAGAAAGTGCGCCACTTGGTGAAGTTTGGTGTGGTGAGCTCGAGGGC
GACCGGGGTGATGGACTTGAAGTTCTGGATTGCTTGGGCTTGAGCCTAGAGTGAGGCGAGCGGGTTAGGAGC--------
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------------------------------------------------------ATCGACCTCGGCGTTGCCCATGTTCG
AGACGTGAGATTCATGGGTGCGTGAGGTGGAGGAAGGATAAGGCGATGGCTAGGACAGAGCTGACGTGAGAGACGGAGCG
GAAGCAATTATGGGAAGGGATTGAGTAGCTGATACTACTCCATCCTTTATTGGTCCTCTTCGTATTTTGTGCCCAAATTT
CACCATA
>chr1A_129
CAAAGGTCTATGG-------------------------------------------------------------------
-------------------------------------------------------------AGCAATCTGGGTGTCTGAA
TTCCTCTAAATCGATAACAAATGTAGAAATGGTTTGAAAGAGTTCGGACACACTACAGATAAGCCTTGGACCCACCATAA
ATCCACATTTTCCTCCTCCTCCCTTCTTTCTCATCTCTTCATTGGACGAGAGGTGAACATTTTGTGCACTAGATTGGATG
GCAGCCCACCTATCTTCTGTCCGCGGACACGTCCGGACTACCCTTTTTGATGTACACCGTTGGAGATGCCCTAAGTCATG
CAGGTGTACTCACCCTATTTTTATTTACTTCGCATATTAGCTTTGTCTCGCGTTAAACTTTCTAAACTTTAACCAAGTTT
GTAAAAT-AGGAATTTAACATTCACAATACCAAATCAATACCATTAGAATCAATTCAACATACTCCTTCGTACCATACTT
TTTTTATTGTGAAGGTTTAGATTGGTTTTGATAAACTTGATCAAACATTATAAAATTAGACTTAGGTCAAACCTAATATA
TGTAGTAAATAAAAACGGAGGAGTATTTTCATTAGCGCCG--G--TGTGTGCAGTCACGGAGTGTGACAGGATTACACAC
GTCCAGTACAGACCCTCACTGAAACAGCCAAACGTATATGTC--------CAGTGATCAGGGCGACAAAGTGAGGACAGA
CTTAGCCAAGCTGATGGACGCAACGAGTGGCACTCGGCACGCAAGTTGTGTGATACGTGGAGAGCCGAGAGCCCAACACG
GAACCAGGGACAGGGGGCGTGCACTCACGCGCACGCCGAGCTTGTGCTGCCTCTGTGCCACCACTGTGCGCCACTGCGAG
CCTCACCGCTGCT-CCGGCGGCCCGGCCTAT---------------AAAACGTGGCCCTCGC---CCCCTC-GCTAGCAA
AGGCAAAGGTTTC----TTCCACATTTCCCCTGAGCAAAGAGAAGCAAATCACAAGAAAGCGAAGCAAATCGGC----GG
---------------GATGGCCGGCCAAGCTAGGGCGTTCATGTGCGTGGCGCTCGTCGTCCTCCTGCTCCTCGTCGAGG
TGATCACCTGATCCATGCCCTT-A--GAATCTTCCAGAGCACATGCATGCTACGTACGTTTTGGTTGCCTAGCTAAACTC
GGTTCCTGTTCATTTTCCTCTTCCGCAGACCACCGCCCCGAGTGGACAAGCTCACGCCGTCGGTAAGCGCACACGCATGC
AT----GCATGGGGTTCATTTGCCAATCCAGCCGACTTGATCAATCGGTACCAGAC-----GACTGATATGTGA-TATCC
TTCTAACTCTTACAACTATTTGCAGATTGCGGCAGCGCGTGCTCGTACCGGTGCAGCAAGTCGAGCCGGCCGAATTTGTG
CAACAGGGCGTGCAACACGTGCTGCCGGCGATGCGACTGCGTGCCGCCCGGCACCGCCGGCAACGAGGACGTCTGCCCCT
GCTACGCCCACATGACCACGCACGACGGCCGCCACAAGTGCCCATGATTCAACCG--C-CTTCTC-----GACGGCCGGT
CGAGGCTAATGCATACTAGAT---CATGGCGTCTCAGTAAATATCCCATCAAGCTAGCTACAGCCAACGATAACT---AG
ACTACCAGGGGCACGATCGATATGATATCATG--TACTCAAGCTAGTGCTGCTGCC----------TATGTACCTTGTGC
TCATCCATC-----CGTGATCGATCCATCGTGTAAGC---ATGTTTGCTATCTCGTTCTCACGCAGTGGTAATTGCCGTC
AATTGCACTAAAACAATTAGTGCGTATGGTATTGAATTTATACTCCAGCCAACTCATGTAAAAGTCTGAACTGATGAAGA
GAGGCGGACAATATATATCT--------ACACCATTCTCCCTCACGTCTAGGCTTATTTACT--------------CCTT
AGACGTAGGATTTGTCTAGGCCGCATAATCGTTTTTTTAATACTGCGTTGGTAGGGTCTGATCACAAGACCTCTCGGCTC
TGATACCATATTGAATTCCTGCTTCAGTCAGTTTATTCAAAAGTCCGAACTGATGAAGAAAGACGGATGATATATTTTAA
CACATGTTCATATGAGCATGTGTGTATTTGTGCGTT-TTCGTGCACGTG-------------------------------
-----------TGTCGCGATGTGCTCATAGTCCTCGTCAAGTCTTTTGAGGGTGTTGTGGACGAGTTGTTCGTCGGTGAT
GGGAGC-GTCGACCACCATCTTCTGCTTGTGGCAGTAGTCAGTG--------------ATGGAGCAGTCACCATGCTGGA
GGTTGCGGAATTCTTTGCCGAGGTACATGGCGCGTGCCTTCTGGTAGTCGCGGAAGAGGGCGATGATGCTCGTTCAAACC
AATGTAGTCTCCCCTTCCATCACCAGC----------------------------TCGAGGATGTAGAAGGAGATGGAGC
CTTACAAGCAGCGAAGGATGATGGCGTCGAGGCGGAGCCATTCTTTGTCATTGGCTTGCGGGGCCTCCGTGTCGAGATGA
TCCGCGAGCTCGTACTGGGTGAC-ACAACACGGAAGAAAGTGTGCCGCTTGCTGAAGTTTGGTGTGGTGAGGTCAAGGGC
GACCGGGGTGATGGACTTGAAGTTATAGATCACTTGGACTTGAGCCTAGAGTAAGGGGAGTGGGTTGCGAGC--------
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------------------------------------------------------ATCGACCTTGGCATTGCCCATGTTCG
AGACGTGAGATTGATGGGTGTGTGAGGTGGAGGAAGGATAAGGCGACGGCTAGGACAGAGTCGACGTGAGAGACGAGGCG
GAAGCAATTATGGGAAGGGATCGAATAG----------------------------------------------------
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>chr1B_659
ATTTTCCT------------------------------------------------------------------------
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----------------------------------GAGCGTCAGTCTGTGTGCAGTCACGCAGTGTAACAAGTTTACACAC
GCACAATACAGACCCTCACTTAAACAGCCAAATGCATATGTCCAGTGAATCAGTGATGAGGGCGACAAAGTGAGGACAGA
CATAGCCAAATTGATGGAAGCAACGAGTGGCACTCGGCACGCAAGTTGTGTGATACGTGGAGAGCCGAGAGCCCAACACG
GAACCAGGGACAGGGGGCGTGCACTCACGCGCATGCAGAGCTTGTGCTGCGTGTGTGCCACAACTGTGCGCCCACTCCGA
GCCTGGAGTCCTCACCGCT------GCTCCGGCGTTCCGGCCTATAAAAACGTGGCCCTCGT---CCCCTCCGCTAGCAA
AGGCAAAGGCTTC----TTCCACATTTCCACTGAGCAAAGAGAAGCAAATCGGCAGAGAACGAAGCAAACCGGCCGACGG
TTCCTGGCCCCTCGCCATGGCCGGCAAAGCTAGGGTGTTCATGTGCGTGGCGCTCGTCGTCCTCCTGCTCCTTGTCGAGG
TGATTACCTGATCCATGGCGTT-A--GGTTCTTCCAGAGCACATGCATGCTATG-----TTTGGTTGCCTAGCTAAACTC
GGTTCCTATTCATTTTCGTCTTCCGCAGACCACCGCCCCGACTGGACAAGCTCACGCCGTCGGTAAGCCCACGCACGCAT
TCATGGG----TGACTCATTTGCTAGTCA----GACTTGATCGACGGGCATGCATGCGCCAGACTGATATATACGTATCC
TTCTATACGCT-----GATTTGCAGATTGCGGCGGCGCGTGCTCGTACCGGTGCAGCAAGTCGAGTCGACCGAATCTGTG
CAACAGGGCGTGCAACACGTGCTGCCGGCGATGCAACTGCGTGCCGCCCGGCACCGCCGGCAACGAGGACGTCTGCCCCT
GCTACGCCCACATGACCACGCACGACGGCCGCCACAAGTGCCCATGATACAACCG--C-CATCTC-----CACGGTCAAT
CAAGACTACTACATAGTCGATCGTCATGGCCTCTCAATTAATATCACATCTA--------CGATCAGCGACAGCT---AG
ACTACCAGAGGCACGATCTATATGATACATGTACTACTCAAGCTAGTGCTGCTACC----------TATGTACCTTGTGC
TCATCCATA-----CGTGATCGACCCATCGTGTAAGC---ATGTTTGCTATCTCATTCTCACGCAGTGGTAATTGC-GTC
GATTGCACTAAAACAATTAGTGCGTGTGTTATTGGATTCATGCTTCAATCAACTCATCCAAAAGTCTGAACTATTGGAGA
GAGACGGACAATATATTG-----------CAACACTCTCCCTCATGTCTAGGCTTATTTACT--------------CATT
AGATGTGAGATTTATTTAGGCCGTAGAATCGTTTTTTAGTACTATGTTGGCAAGATTTTGAACACAAGACTTCCTGACTG
TAGTACCATATTAAATTAATGCTCCAGTCAACTTATCCAAAAGTCTGAACTGATAAAAAGAGGCAGA-AATATATTTCAA
TACATGTTCATATGTGCACATGTGTATGCATGCGTGTCCGTGCTCAAGCTTACATGAACTAATTAAGGCCAAGTGGCAAC
AAGGGAACAAATGTAGTGATGTGCTCATAGTCCTCGTCAAGCCCTTTGAGGGTGTTGTGGACGAGTTGTTCGTCGGTGAC
GGGGGGTGTCCACCACCGTCTTCTGCTTGTGGCAGTAGTCGGTA--------------ATAGAGCAGTCGCCATGCTGGA
GGTTGCAGAATTCTTTGCCAAGGTATATGGTGTGTGCCTTTTGGTAGTCGTGAGAGAGGGCGATGATGCTCGTCCAGACC
GCTATAGTCTCCCCTTCCATCACCGA----------------------------GTCGAGGATGTCGAAGGAGATGGAGC
CTTACAGGCGGTGAAGGACGATGGCGTCGAGGCGGAGCCGTTCTTCGTCATTGGCGGGAGGGACCTCCATGTCGAGATGA
TCCACGAGCTTGTACTAGGTGATGACAATGCGGAAGAACGTGCGCCACTTGGTGAAGTTTGTTGTGGTGAGCTCGAGGGC
GACCGGTATGATGGACTTGAAGTTCTGGATTGCTTGGGATTGAGCCTAGAGTGAGGCGAGCGGGTTGGGAGCCAGCGGCG
GAGCTATGTTGCTTCCTGCAGGTGCCATGGCCCCCCAGCCTTAATAAAAATACACAGGGATTTGTTTTGAGAGGGGTTAG
ATTAAGATAATATAATTTTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTCCGCCAGTGTTGGGAGCATCGACCTCGGTGTTGCCCATGTTCG
AGATGTGAGATTCATGGGTGCGTGAGGTGGAGGAAGGATAAGGTGATGGCTAGGACAGAGCTGACGTGAGAGACGAAGCG
GAAGCAATTATGGGAAGGGATCGAGTAGCTGATACTACTCCGTTCTTTATTGATCTTCTTCGTATTTTGTGCCAAAATTT
AATCATA
>chr1D_916
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-------------------------------------------------------TGCCACCACTGTGCGCCCAATGCCA
GTCTCGAATACTCACCGGCGGGCCGGCCTAT---------------AAAACATGGCCCGGCTCATCCCCTC-GCTAC--A
AGGCAAAGGTTTGAGGTTTCCACATTTCCCCTGGTG-AGGAGAAGCAAATCGGCAGAGAGCGAAGCAAACCGGC----GG
TTCCTAGCCCCTCGCGATGGCCGGCAAAGCTCGGGTGCTCATGTGCGCGGCGCTCGTCGTCCTCCTGCTCCTTGTCGAGG
TGATCACCTGATCCATGGCGCT-A--GACTCTTCCAGAGTACATGCTTGCTATA-----TATGGTTGCCTAGCTAAACTC
TG-CCCTGTTCATTTTCCTCTTCCGCAGACCACCGCTCCGAGTGGACAAGCTCACGCCGTCGGTAAGCACACGCGCAAGC
AT----G----GGATTCATCTGCTAATCCGGCCGAGTTGATCGATCGGCACCAGAC-----GACTCATATATCTC--TCC
GTCTAACTCTTACAACGATTTGCAGATTGCGGCAGCGCGTGCTCGTACCGGTGCAGCAAGTCGAGCCGGCCGAATCTGTG
CAACAGGGCGTGCAACACGTGCTGCCGGCGATGCGACTGCGTGCCGCCCGGCACCGCCGGCAACGAGGAAGTCTGCCCCT
GCTACGCCAACATGACCACGCACAACGGCCGCCACAAGTGCCCGTGATCCAACCCATCTCATCTG-----CACGGTCGAT
CGACGACAAT-----------------------------AATATCCCATCAAGCTAGCTACGATCAACGACAACTAT-AG
ACTACGAGAGGCACGATCGATATGATATCATG--TACTCAAACTAGTGCTGCTACCTAGTACTATATATGTACCTTGTGC
TCATCCATT-----CGTGATCGAACCATCGTATAAAGCATATGTTTGCTGTCTCATTCTCACTCACGCA-----------
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-------------------------------------------TTCGTAATTGCCGTGAATTGAGCTACTAAAA------
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>chr1B_916
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-------------------------------------------------------TGCCACCACTGTGCGCCCAATGCCA
GTCTCGAATCCTCACCGGCGGGCCGGCCTAT---------------AAAACGTGGCCCGGTTCATCCCTTC-GCTAC--A
AGGCAAAGGTTTGAGGTTTCCGCATTTCCCCTGGTG-AAGAGAAGCAAATCGGCAGAGAGCGAAGCAAACCGGC----GG
TTCCCAGCCCCTGGCGATGGCCGGCAAAGACAGGGTGCTCATGTGCGCGGCGCTCATCGTCCTCCTGCTCCTTGTCGAGG
TGATCCCCTGATCCATGGCGCT-ATAGACTCTTCCACAGTACATGCATTCTAGAATA---TTGGTTGCCTTGCTAAACTC
GGTCCCTGTTCATTTTCCTCTTCCGCAGACCACCGCTCCGAGTGGACAAGCTCACGCCGTCGGTAAGCACCCACGCACGC
AT----G----GGATTCATCCGCTAGTCCGGCCGAGTTGATCGATCGGCACCATC-------ACTGATATATCTC--CCC
TTCTAACTATTACAACGATTTGCAGATTGCGGCAGCGCGTGCTCGTACCGGTGCAGCAAGTCGAGCCGGCCGAATCTGTG
CAACAGGGCGTGCAACGCGTGCTGCCGGCGATGCGACTGCGTGCCGCCCGGCACCGCCGGCAACGAGGAAGTCTGCCCCT
GCTACGCCAACATGACCACGCACAACGGCCGCCACAAGTGCCCATGATCCAACTG--CTCATCTC-----CACGGTCGAT
CGACGGCAAT----------------------------------------------------------------------
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>chr1A_960
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-------------------------GCCTAT---------------AAAACGTGGCCCTCGC---CCCCTC-GCTACCAA
AGCCAAGAA-------TTCCCACATTTCCCCTGAG-AAAGAGAAGCAAATCGGCAGAGAGCGAAGCAAACCAGCCGGCGG
TTCCTGGCCCCTCGCGATGGCCGGCAAAGCTAGGGTGCTCATGTGCGCGGCGCTCGTCGTCCTCCTGCTCCTTGTCGAGG
TGATCACCTGATCCATGGCGCT-A--GCCTCTTCCACAGTACATGCATGCTATA-----TATGGTTGCCTAGCTAAACTC
TGAGCCTGTTCATTTTCCTCTTCCGCAGACCACCGCTCCCACTGGACAAGCTCACGCCGTCGGTAAGCACACTCGCATGC
AT----G----GGGTTCATCTGCTAGTCCGGCCGAGTTGATCGATCGGCA---------------GATATATCTA--CGC
TTCTAACTCTTACAACTATTTGCAGATTGCGGCAGCGCGTGCTCGTACCGGTGCAGCAAGTCGAGCCGGCCGAATCTGTG
CAACAGGGCGTGCAACACGTGCTGCCGGCGATGCGACTGCGTGCCGCCCGGCACCGCCGGCAACGAGGGCGTCTGCCCCT
GCTACGCCAACATGACCACGCACAACGGCCGCCACAAGTGCCCGTGATCCAACCG--G-CATCTCATCTCCACGGTCGAT
CGCGA-----------------------------CAATAAATATCACATCAAGCTAGCTACGATCAATGACTACTAGCAG
ACTACCAGAGGCACGATCGATATGATATCATG--TACTCAAACTAGCGCTTGCTAC-----CTATATATGTACCTTGTGC
TCATCCATAATATTCGTGATCGATCCATCGTATAAT-CATATGTTCGCTATCTTATTCTCACCCATTCGCAAAGGCCGTG
AATTGCTCTA----------------------------------------------------------------------
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>SNPs
S-SS-SSSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-------
-----S---------------S--S---S---------S--S---S---------SSSSS----------S----S----
-------------------S-------S-------------------S-----S---------------SS---------
---------S----SS---S-S-----S--S--------SS---------S--------S--------------------
-----------S-S--SS------------S-----------------SSS--S--------------------------
S-----SS--S----------S---------S--------S-----------S---------S------S-------S--
------------SS----------S---------------------S----------SS---------------------
--S--------------------S--------S--------------------S-----------------S--------
------------S------------S-S---------------------------------S-----S------------
---S---------------------S---------S---S----S---------------------SS------------
------------------------------------------------------------------------S-S-----
-------------------------------------------------------------S------------------
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---S-----S------------S---------S-----S----------S------------------------------
--S--S--------------------------------------------------------------------------
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--------------------------------------------------------------------------S-----
--------------S-----------------------------------------------------------------
--------S------------------------------------------------------------S----------
--------------------S-------------------------------------------------------S---
---------------------S-SS---------S----------------------S--------------------S-
------------------S-SSSSSSSS-----S-----------------S----------SSSSSSSSSSSSSS----
--S----------------SS--------S---------------------S----------------------------
-----S---------------------------S---------------------S------------------------
-----S----------------S-------SSSSS-S-------------------------------------------
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----------S----------------------------S----SSSSSSSSSSSSSS--------S-------------
------------------S-----------------------------------------S----------S--------
--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------
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--------------S-----------------------------------------------------------------
------------------------------------------------------------------S-------------
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---------------------------------------------------------------------------S----
---------------------S-------------------S-S--------S--S-----------------S------
S-S----
>forward_310
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--------------------------------------------------AGGCGAACATTTTGTGCACC----------
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>reverse_2451
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--------------------------------------------------CATTCGCCATGGAGCATTCG----------
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