>input_sequence_65580
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---------ATGGGAGGCGGCATAAAGCAGCTGCTGGCGAGCTTGTTGGGAGCGGTGGGTGGAGGCCAGAGGGGCGCCAA
GAAGGAGAGCACGCGGCCGCAGCCGCAGACAGTGGAGCTCAGGGTCCGGATGGACTGCGAGCGCTGCGAGCGCCAGGTCA
AGAAAGCACTCGCCGGCATGCGAGGTTAGTTCCGT------------CGGTCGGTCGGTCACTCATTGAGGTCGGTCACA
TTGCCTTGTTTTCTCTGCTCGTTGCCGTCGTGCCTAGGAGGCTAGGGCAATGCCTTTCCATGTTCCTCGCCGTCTAGAGC
GTAG---ACAG-----TGTAGCTCCTGATCAATAATGCCCGTCGTGTCATGTTCGCTTAAGCTTTTCG-TAGCCCGTACA
CCTGTCGCTACAACACTGAAGCATCTGCTCAGAAAAGATGATGAACCCCCCCTTTCCGCACTCATGTCCAACTAGTTTAC
TTAGCGAATACCTTTCAATATTTTTTTACTTAGCGAATAGTCACGTTTTCCCTTTTTG--TGATTTGGCTTAGCCTCCAT
TTTAACTTTTGTGAGCACTCCTGTTTAG--------------GAGCTGGTGGTTCCTTATTTGACGAGAGGTTTTT-TTT
GGAGTTGCAGGTGTGGAGCGCGTAGAGGTGAACAGGAAGCAGCAGAGGGTGACTGTCACTGGCGTCGTGGACCCCCACAA
GGTCCTGCGGAGGGCCCAGTCCACAGGCAAGAAGGCTGAGCTGTGGCCCCGGAATCATCATCATCCTGGCTACGACGACA
ACAGCGCTGCCGTCACGGCCCATTATGGCGCCATCGGAGCAGCCCAGGCCCATGGCAGGTGGGCCCCGTCTCCCTACCGG
CGGAACGCGGACGCAGCCAGCGCCGAGCAGATCGCCAGCCTCTTCAGCGACGAAAACCCGAACGCCTGCTCCGTCATGTA
G-------------------------------------------------------------------------------
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>chr6D_1_TraesCS6D01G282300
GACCTCTCCCACCGTGACGCCTCCTGCCGTCGCAGGCAAGGCGCCGACCTCCTCGGGCGGGCCGTCGAACTTACATAGGC
TGCTCGCCAACTGTTGCTCGCTGCTGTTTCTGACCATCTCCACCGTGTTCTTCATCTCATGAATCAGCAACTGAATAAAC
CTAACTGATAAGAGCCCCTGTATATCGCATAAGTCTCGTATGTCAGCTGTTTCGGAAGCGCTTCCCGAGTTTAAGCGTAG
GGGTAGAACACTCCACTCCACCAGCGAATGGGTCATTCGCCGACTGCTCGTCACCAATCTTAGAAGAACACTG------A
CAGATCGGTTTGCTGAGAAA---CATCACGACATGTGCCCATAGTTTCCTGTGCTACGAGGAAACGGTGCAAAAACCGTG
AAGCCGCAG--GCGAGGATAA----GAAGAAGAGCGTGTTTGTGCAGTCATCCG----TCGATGGCAGTGATGTTTCACA
CGCATGTGCGAACCCCTTCTTCCCAAGCTGCAGCATTGCAGGCGATTTCTTGCGCCCCGCGGTCTGCACT--------TC
T-GCACTCTGCACTGCACCGCTCTCCCAAAGCCGAAAGGCCCGGCCTACTGCAACACACAACCGCCCGCACCGAGCCACT
GCAC--GCACGACCGTCCGTCGTCGTCAGTCACATGAGGCT----CTGAGAGGAGAGGCCTCGCACCATCACCACCACCA
CGGGCCACGGCTCCGTCGCTTTTCCCCGACCTCTTCA--TCGTGCTCTCTTGTCAGCCTCCACACACGCGCGCGCAC---
-ACACACCAGCCC--C---GTCTCTCGTGCCCCCTCGCCGAGGCGCCATTGCCTTCTTCAGGTCGCCTTTGAACAGTTCC
CCGGCCGGCCTCTTACAAAGCCAGCCAGACAATGCCGTGCCATTATGCATGCACAACCCAACACTAGCTACCTAGGCCCT
CCACTCAGGCAGGCTTCTTGCTTCTTTCACTCACTCACTCGTCACTCATTCACCCACTTCCAGTGAGCCTCTCGCCGCA-
---TTCTCCATGGGAGGCGGCATAAAGCAGCTGCTGGCGAGCTTGTTGGGAGCGGTGGGTGGAGGCCAGAGGGGCGCCAA
GAAGGAGAGCACGCGGCCGCAGCCGCAGACAGTGGAGCTCAGGGTCCGGATGGACTGCGAGCGCTGCGAGCGCCAGGTCA
AGAAAGCACTCGCCGGCATGCGAGGTTAGTTCCGT------------CGGTCGGTCGGTCACTCATTGAGGTCGGTCACA
TTGCCTTGTTTTCTCTGCTCGTTGCCGTCGTGCCTAGGAGGCTAGGGCAATGCCTTTCCATGTTCCTCGCCGTCTAGAGC
GTAG---ACAG-----TGTAGCTCCTGATCAATAATGCCCGTCGTGTCATGTTCGCTTAAGCTTTTCG-TAGCCCGTACA
CCTGTCGCTACAACACTGAAGCATCTGCTCAGAAAAGATGATGAACCCCCCCTTTCCGCACTCATGTCCAACTAGTTTAC
TTAGCGAATACCTTTCAATATTTTTTTACTTAGCGAATAGTCACGTTTTCCCTTTTTG--TGATTTGGCTTAGCCTCCAT
TTTAACTTTTGTGAGCACTCCTGTTTAG--------------GAGCTGGTGGTTCCTTATTTGACGAGAGGTTTTT-TTT
GGAGTTGCAGGTGTGGAGCGCGTAGAGGTGAACAGGAAGCAGCAGAGGGTGACTGTCACTGGCGTCGTGGACCCCCACAA
GGTCCTGCGGAGGGCCCAGTCCACAGGCAAGAAGGCTGAGCTGTGGCCCCGGAATCATCATCATCCTGGCTACGACGACA
ACAGCGCTGCCGTCACGGCCCATTATGGCGCCATCGGAGCAGCCCAGGCCCATGGCAGGTGGGCCCCGTCTCCCTACCGG
CGGAACGCGGACGCAGCCAGCGCCGAGCAGATCGCCAGCCTCTTCAGCGACGAAAACCCGAACGCCTGCTCCGTCATGTA
GCGCCACAGCGTTTCATACAGAGAAGTAGTTGGTTTTTATGT-------------TTTTTTTATGCTTTAGCTAGAATAG
CTGTAGGAGCAGAAGCTCACTCACTGGGTTCGCTCTTGCCAATTTACCTTGCCAA-CCTCACAAAACTTGCCGTTTTCGG
CAGCCT-CCGGGCATGCCAAACGTTGCTGGCGTGCCAAAATCTTGGCTACCAACCGAGC----------AAGCATGGCCT
TGGTGAG-AAGATCTCCGGTTGGTCTCGTGTCAT--------GTCGTCACTGCATCTCCTGCTAGATTTTGCAAGCTGCT
TTGCTG--------GTTTGCTTTATGATGTGCGACACGAGTTCCGTGCACGTAGGAATTCCAACCAGAGGCAGCCAGGAT
CTAGGCCGCCATCAA-------TCACCTGTGGCGTTAGATACTTCGACGACGACGGACGGAGACTTCGACGTGGGTGAGA
TGCCGGGCGCCATAGTTTATGCTCTGCTGT--------CTGGCTGTCTCTGTGCGCTCCTCGCCGTTCTTTTGGTTTTAC
GTCGCGACGCGGTAATGGAGCATGAGCTAGCTAGCTACAGCCAGCGAGCTTGC---CGCCCAGGCCGCAGAGGTCAACAT
ACGTCCCCCCAGCCCCCACTGCCGTCCCTCTTTTTCGTTTAAAACGATCGATGATAAAGCATGCAGGCCAGGGAG-----
-CAATGGAGGTTCGGTGCGCGGTGACAACATCCGTCAGGTTCCTTCCTTGGAGGAACAGTATTTGTGCAGATGCTGTGGT
GCAGCGAACGAA----CCCCTCGCTTTTCCGCCGG-----TGCAAGGCCTCCTTTTGAGCTCGAATGCTCGATCGTCTCC
GGGCTTCTAGACTGCGGTGGTCGCTGGGTGCG--------TGCGGACGCCTCTGCATCTATGGCTCTGTGCTGTGCTGCT
GGGTGGGTGCGTGCGTGGGTTGACGACGGATTAGCTGATTAACAACGACGATGAGCTG----------CGTCAATGGCGC
CCTCATTGCGCACGCGGCCACTAATATCCAGC-TTTTTTTATCATATGGACTGAT
>chr6A_1
GACCTCTCCCACCGTGACGCCTCCTGCCGTCGCAGGCAAGGCGCCGACCTCCTCGAGCGGGCCGTCGAACTTACATAAGC
TACTCGCCAACTGTTGCTGGCTGCTGTTTCTGACCATCTCCACCGTGTTCTTCATCTCATGAATCAGCAACTGAATAAAC
CTAACTGGTGATAGCCCCTGTATATCGCATAAGTCCCGTTTGTCACCTGTTTCGGAAGCGCTTCCCGAGTTTAAGCGTAG
GGGTAGA--ACTCCACTCCGCCAGCGAATGGGTCACTCGCCAATCGCTCGTCACCAATCTTAGAAGAACATTTCACTTTA
CAGATGGGTTTGCTGCTAAACATCATCACGACATCTGCCCATAGTTTCCTGTGCTACAAGGAAACGGTGCAAAAACCATG
AAGCCGGAG--GAGGATAGGAAGAGGAGGAAGAGCTTGTCCGTGCAGTCATCCGTCCATCGATGGCAGTGATGTTTCACA
CGCATGTGCGAATCCCTTTTTCCCAGGCCGCAGATTTGCAGGCGATTTCTTGCGCCGTGCACTTCTGCACTTCTGCACTC
T-GCACTCTGCACTGCACCGCTCTCCCAAAGCCGGAAGGCTCGGCCTACTGCAACACACAACCGCCCGCACCGAGCCACT
GCG------TGCACGACCGTCGTCGTCAGTCACATGAGGCTGGCTCTGAGAGGAGAGGCCTCGCACCACCACCACCACCA
CGGGCCACGGCTCCGTCACTTCTCCCCGACCTCCTCTCTTCGTGCTCTCTTGTCAGCCTCCACACACA------CACGCA
TACACACCAGCCCCCC---GTCTCTCCTGTCCCCTCGCCGAGGCGCCATTGCCTTCTCCAGGTCGCCTTTGAGCAGTTCC
CCGGCCGGCCTCTTACAAAGCCAGCCAGACAATGCCGTGCCATTATGCATGCACGACACAGCACTAGCTGCCTAGGCCCT
CCACTCAGGCAGGCTTCTTGCTTCACTCACTCACTCACTCGTCACTCATTCACCCACTTCCAGTGAGCCTCCCGCTGCGT
TCGTTCTCCATGGGAAGCGGCATAAAGCAGCTGGTGGCGAGCCTGCTGGGAGCGGTGGGTGGAGGCCAGAGGGGCACCAA
GAAGGAGGGCACGCG------GCCGCAGACAGTGGAGCTCAGGGTCCGGATGGACTGCGAG---------CGCCAGGTCA
AGAAGGCACTCGCCGGCATGCGAGGTTAGTTCAGTT-----------CGTTCCGTCGGTCACTCATTGAGGTCGGTCACA
TTGTCTTGTTTCCTCTGCTCGTCGCCATCGTGCCTAGGAGGCTAGGGCAGTGCCTTTCCATGTTCGTCGCCGTCTAGAGC
GTAGTAGACAACAGCATGTAGCTCCTGATCAATAATGCCCGTCGTGTCATGTCTGCCTAAGCTTTTCCTTAGCCCGTACA
CCTGTCGCTACAACACTGAAGCATCTGCTCAGAAAAGATGATGAACCCCCCATTTTCGCGCTCATGTCCGACTAGTTTAC
TTAGCGAATA-------------------------AATAGTCTCGTTTTCCCTTTCTG--TGATTTGGCTTAGCGTCCAT
TTTAACTTTTGTCAGCACTGATTTTTACTAGTAGGAGCTACCGAGCTAGTGGTTCTTTTTTTGACGAGAGGTTTTTTTTT
GGAGTTGCAGGTGTGGAACGCGTAGAGGTGAACAGGAAGCAGCAGAGGGTGACTGTCACTGGCACCGTGGACCCCCA---
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----------------------------------------------GGCCCGTTACAGGTGGGCCCCGTCACCTGT----
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------------AAG----CTCACTCGGTTCGCTCTTGCCAATTTACCTTGCCAAGCCTCACAAAACTTGCCGTTTTCGG
CAGC-TCCCGGGCCTGCCAAACGTTGTTGGCGTGCCAAAATTTTTGG---------CTACCAACCAACGAAGCATGGCCT
TGGTAAGAAAGATCTCCGGTTGGTCTCGTGTCAT--------GTCGTCACTGCATCTCTTGCTAGATTTTGTA-------
-TGCTGCTTTGCTGGTTTGCTTTATAATGCGCGACACGAGTTCCGTGCACGTAGGAATTCCAACCAGAGGCAGCCAGGAT
CTAGACCACCATCAAATATCAGTCACCTGTGGCGCTAGATACTTGGACGACG---GACGGAGACTTCGACGTAGGCAAGA
TGCCAGGCGCCATAGTTTATGCTATCTGGCTCA-----CTGTCTGTCTCTGTGCACTCCTCGCCGTTCTTTTAGTTTTAC
GTCGCGACGCGGTAATGGAGCATGAGCTAGCTAGCGATTAGCAAACTTGCCGCCCACGCCCAGACCCCAGAGGTCAACAT
ACGTCCCCCCGGAACCCACTCCCCTGCCTCTTTTCCGTTTAAAACGAGCTCTGGGTGGTAAAGCAGGCGAGGGAGCAATG
GAGGTCGGG--TCAGTGCGCGGTGACAACATCCGTCAGGT-CCTTCCTTGGAGGAACAGTATCGGTGCAGATGCTGCGGT
GCAGCGAACGAAGGCACCCCTCGCTTTTCTGCCGGTGCAATGCAAGGCGTCCTTTTGAGCTCGAATGCTCGATCGTTTCC
GGGCTTCTAGACTGTTGTGGTCGCTGGGTGCG--------TGC------------ATGTATGGCTCTGTGCTGTGCTGCT
GGGTGGGTGCGTGCGTGGGTTGACGACGGGTTGGCTGATTAACAACGACGGTGTGCTGCGTGCAGTGGCGTCAATGGCGT
CCTCATTGCGCACGCGGCCACTAATATCCAGCTTTTCTGTATCATATGGACTGAT
>chr6B_1
GACCTCTCCCACCGTGACGCCTCCTGCCGTCGCAGGCAAGGCGCCGACCTCCTCGGGCGGGCCATCGAACTTACATAGGC
TACTTGCCAACTGCTGCTCGCTGCTGTTACTGACCATCTCCACCGTGTTCTTCATCTCATGAATCAGCAACTGAATAAAC
CTAACTGATGATAGCCCCTGTATATCGCATAAGTCTCTTGTGTCAGCTGTTTCGGAAGTGCTTCCCGAGTTTAAGCGTAG
GGATACA--ACTCCACTCCACCAGCGAATGGGTCACTCGCCTATCGCCCGTCG---ATCTTAAAAGAACACTG------A
CAGACCGGTTTGCTGAGAAA---CGTCACGACATGTGCCCATAGTTTCCTGTGCTACGAGGAAACGGTGCAAAAACCAGG
AAGCCGGAAGCGAGGATAAGAAGAGGAGGAAGAGCGTGACCGTGCAGTCATCCA----TCGATGGCAGT-----------
-------------CCCTTTTTCCCAAGCTGCAGCTTTGCAGGCGATTTCTTGCGCCCTGCGGTCTGCACTGCACCTGCAC
GGGCACTCTGCACTGCACCGCTCTCCCAAAGCCGGAAGGCTCGGCCTACTGCAACACACAAGCGCCCGCACCGAGCCACT
GCATCTGCATGCACGACCGTCGTCGTCGTCAGTCACA---------TGAGAGGAGAGGCCTCGCACCACCACCACCATCA
CGGGCCACGGCTCCGTCACTTTTCCCCGAC-----CTCTTCGTGCTCTCTTGTCAGCCTCCACACACA------CAC---
-ACACACCAGCCC--CCCCGTCTCTCCTGTCCCCTCGCCGAGGCGCCATTGCCTTCTTCAGGTCGCCTTTCAACAGTTCC
CCGGCCGGCCTCTTACAAAGCCAGCCAGACAATGCCGTGCCATTATGCATGCACAATCCAACACTAGCTACCTAGGCCCT
CCACTTAGGCGGGCTTCTTGCTTCTTTCGCTCGCTCACTCGTCACTCATCCATCCACTTCCAGTGAGCCTCTCGCTGCA-
---TTCTCCATGGGAGGCGGCATAAAGCAGCTGGTGGCGAGCCTGCTGGGAGCGGTGGGTGGAGGCCAGAGGTGCGCCAA
G---GAGAGCACGCAGCCGCAGCCGCAGACAGTGGAGCTCAGGGTCCGGATGGACTGCGAGCGCTGCGAGCGCCAGGTCA
AGAAGGCACTCGCCGGCATCAGAGGTTAGTTCCGTTGGTCGCTCGCCCGGTCGGTCGGTCACTCATTGG----GGTCACA
TTGTCTTGTTTTCTCTGCTCGTTGCCATC--------------------GTGCCTTTCCATGTTCCTCGCCGTCTAGAGT
GTAG---ACAACAGTATATAGCTCCTCATCAATAATGCCCGTCGTGTCATGTCCGCTTAAGCTTTTCCCG-GCCCGTACA
CCTGTCGCTAGAACACTGAAGCATCTGCTCAGAAAAGTTGATGAACCCCCCCTTTTCGCACTCATGTCCAGTTGATTCAC
T------------------------------------TAGTCCCGTTTTCCTTTTCATTATGATTTGGCTTCGGGTCCAT
TATT--TTTTGTGAGCACTGCTATTTAG--------------GAGCG---GGTTATTTATTTGACAAGTGGTTTTATTTT
GAAGTTGCAGGGGTGGAGCGCGTAGAGGTGAACAGGAAGCAGCAGAGGGTGACCGTCACTGGCGTCGTGGACCCCCACAA
GGTCCTGCGGCGGGCCCAGTCCACAGGCAAGAAGGCTGAGCTGTGGCCCCGGAATCATCATCATCCTGGCTACGACGACC
ACAGCGCTGCCGTCACGGCCCGCTACGGCGCCATCGGAGCGGCCCAGGCCAATGACAGGTGGGCCCCATCTCCCTACCGG
CAGAACGCGGACGCAGTCGGCGCCGAGCAGATCACCAGCCTGTTCAGCGACGAGAACCCGAACGCCTGCTCCGTCATGTA
GCGCCACAGCGTCTCATACAGAGGAGTGGTTGGTTTTTATGCTTTTTTTTTGCGGTTTTTTTATGCTTTAGCTAGA-TAG
TCGTAGGAGTAGAAG----CTCGCTGGGTTCGCTCTTGCCAATTTACCTTGCCAAACCTCACAAAACTTGCCGTTTCCGG
CAGCCTCCGGGACCTGCGAAACGTTGTTGCCGTGCCAAAATTTTGGCTACCAAGTACTACCAACCAACAAAGCATGGCCT
TGGTGAG-AAGATCTCCGGTTGGTCTCGTGTCATACTGTCATGTCGTCACCGCATCTCTTGCTAGATTTTGTA-------
-TGCTG--------GTTTGCTTTATGATGTGCGACACGAGTTCCGTGCACGTAGGAATTCCAACCAGAGGCAGCCATGAT
CTAGACCACCATCAA-------TCACCTGTGGCGTTAGATACTTCGACGACG---GACC------------TGGGCGAGA
TGCCAAGCGCTATAGTTTATGCTCTGCTGTCTGTCTGTCTTTCTGTCTCTGTTCACTCCTCGCCGTTCTTTTAGTTTTAC
GTCGCGACGCGGTAATGGAACATGAGCTAGCTAT----AGCCAGCGAGC-TGC---CGCCCAGGCCCCAGAGGTCAACAT
ACGTCCCCCCAGCCCCCACTCCCCTGCTTCTTTTTCGTTTAAAACGATCCCTGGATGGTAAAGCAGGCCCGGGAGCAATG
CCAATGGAGGTTCAGTGCGCGGTGACAACATCCGTCAGGT-CCTTCCTTGGAGAAACAGTATTTGTGCAGATGCTGTGGT
GCAGCGAACCAAC---CCCCTCGCTTTTCTGCCGG-----TGCAAGGCCTCCTTTTGAGCTCGAAAGCTCGATCGTCTCC
GGGCTTCTAGACTGTTGTGGTGGGTGCGTGCGGACGCCTCTGC------------ATGTATGGCTCTGTGCTGC------
---TGGGTGGGTGCGTGGGTTGACGACAGATTGGCTAATTAACAACGACGATGAGCTGCGTG---------CAATGGCGT
CCTCATTGCGCACGCGGCCACTAATGTCCAGCTTTTTTGTATCATATGGACTG--
>SNPs
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-S------------------------------------------------------------------------------
---------S-S---------------------------S----------------------------------------
-------SS--------------------------S-----S-SS-----------------------------------
-----------------------------------------------------------------------------S--
------S-----S-SSS-SS-------S-----------SS---------------------------------------
------------S-----S---------------S----------------------S----------------------
----------------------------------S-----S---------------------------------------
---S-----S-SS--S----------------------------------------------------S-----------
-----------------S---------------S--S------------------------------SSSSSSS------
--------------------------S--S--------------------------------------------------
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---------------------------------------------------------------------------S----
---------------------------------S--------S--S----------------------------------
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----S---------------------------------------------------------------------------
---S----------------------S----------------------S------------------------------
----------S-----------------------------------------S--------------S------------
-------------------------------------------------------S------------------------
----------SSSSSSSSSSSSSSSSSSSSSSSSS-------S------------S------------------S-----
-------------------S--S------------------------S-------S------------------------
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----------S--------------------------------------------------------------------S
---------------------SS--S--------------S-------------S-------------------------
-S--------------S-S--------------S-------S-----------S--------------------------
------------S----------S---S-------------S----------------------------------S---
SS-------S-----SSSS-------------------------------------------------------------
-------------S------------S--------------S-----------SSSSSS---------------------
----------------------------------------------------------S------------S-SSSSSSS
S-------------------------------------------------------------------------------
----S--S--------------------------------------------SSS--------------------S----
----S------------------------------------S------------S-----------------S-------
-----------------------------------S-S-----------S----------------S-------------
--------------------S--S-S-----------------------SS--SSSSSSS-S------------------
-------------S--------------------------S---------------------------------------
-----------------------------S--------------------------------------------------
--------------SS---------------------------SSSSSSSSSSSS--S----------------------
--------------------------------S----------------------------------------------S
--------------------------------------S----------------
>forward_757
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-----------------GCTTTTCCCCGACCTCTTCA-------------------------------------------
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>reverse_2098
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-----------------CACTCACTGGGTTCGCTCTT-------------------------------------------
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