>input_sequence_65569
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--------------ATGGCTTCTGCTGA---AGGA---GGAGACAAGTACCGGTCGTTCCTGCACGGCGATGGCGAGAAG
AACACCGTGTGGAGGCATGGAGCCCCTCCCAACTACGACCTGGTGAACAAGCTCTTCGAGGAAGAGAGGACCAAGGTACC
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--------------------------ACTAAACCTGTCCACACGACATGTTTCTTCACTACTAATGCTTC----------
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------------------ACCAAAGTTCTTC-----------------------------------CATGGTTAACACCG
A------------GTGCAACAGGAATGGCCGGAGGGGTCTCTGGAAGAG-AAGGTGCAGCGCCTGCTCAAAAGCTGGGAG
ATGGAGATGGTCCACAAGGTGCGCCCCGAGGACCAGAAGAGCGTCCACC---CTAGGAATTACTCCGCGAGCACCAACGG
TG---------AGACCTGATCCGC-------------AACACAATCGGCCGGCCGCGCCCCTC--AAAAATGA-------
-----------AATAATACCGTGTGC-----------------------------GCTTGCAGGGCTGAAGCCTCTGACG
CGGGAGGAGGTGACCGCCATCGGCGGCTACAACGCGTTCCTGGCGACCAAGCTGCCGCCGGAGCACCGCATCTACGACCC
GGACAAGGAGACGGTCGACTCCGGCATGTCGACGTTCCTCACGGCGTTCCCCAGGGGCTTCGCCATCGAGGTGCTGGACG
TGTACAG---CGGCCCGCCGAGGGTCGCCTTCAAGTTCCGGCACTGGGGTTACATGGAGGGGCCGTTCAAGGGCCACCCC
CCTCACGGCCACCGCGTCGAGTTCTTTGGCGTCTGCATTTTCCACGTGAGTTCCACAGTACTC-----------------
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------------------------------------------------------------------------GTGTATCA
TTGTCATTCAAAGTT---------CAGATTTACAGTAAACCAGTAACC--------------------------------
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--------GAGAAAACACTGTCGCGTTTCTGTGCAACAATGTG--ATGATAGGTTGACGACGACACGAGGGTGGAGAAGG
CCGAGTACTTCTACGAGCGTGGCAACTTCCTCGCGAGCTTCTTGATATCCTAA---------------------------
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>chr3A_1_TraesCS3A01G166300
TGCCCATAGTAAACGACCCATAGGTTTCGTTGCGTCTTCCATGCGGTGCTTTGGATAAGGACAAACAAATCCACGAGAAC
AATGCAAATGATGGTTGAGGTGACAGCCAGCAACCCACCTCCCCCAGCGTACGCCATTACGGCGGATGGGCGCGTGGGTG
TGGTTGGAAGAAAAAAAACAGAGAAAAATAGTGAAAAACGATTGACCAGATTAAAAGTGAGCCAACCAGTTAGAACGAAA
ATAATCTACATGGGTTAAAAAGTGGCAACATTTTTGCTTAAGTTGAGTAAAAAGATGGAAAATCTGTTAAATGAGGTAGA
TTGTCACAAAGTTGAAACTTAGGGTACAGAAGATGGAATTTACTAAAAAAAACCGGTTCAGATGGCAGTGACCATAGCCA
CCAGGCCTAGAACCTTTACTTAATTTATAAAGAATATTTTATTCAATTAATATATCGAAGTGATACAACTGCATTGAAAA
AATGCCCGGCCACTGCATAGCACGATGCACACAGCCAACAAATTGAACAAATCTAAAAATAAATATGGTTTTACAGCAAA
TGTAAATCAATCCAGTCTGGCGTAAAAGAGGGGATAAGGGGATAGTAGCTGGCGATCTCGAAATAGCGATAGAAACAAAA
CATGCAAGGGAACGCCGCAACCAGCTGCTTGTACGCTTGCGCATTTGGTTCTTTGGATTTAACATTTTTTACTCACTTCC
ACGATCAGTTTTAAAAAACAAACTTCACTGCAGACTTAGCAACAATGAGTGGACGCGCCT--CTGCTACAGGGACGAGTC
GCGGATTGGATATTTGGATTGGTGGGTATACTCCTACTAGTCCTTTTTCCA-GCAGTGACGTGTGCGATGATGTGGTTCT
TCTTCTCTAGTGTCTACATCTGTTTTTTTCCTACAAGTAGGGAATCAATCGTTTATTTGATTTGCAGTCTTCATCCAAAC
ACAACCCACG----------------------------------------------------------------------
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-------------------------------------------------------------TTGCCCCTTGAATTGAGCC
GAACGCCATTAGCTATGGCTTCTGCTGA---AGGA---GGAGACAAGTACCGGTCGTTCCTGCACGGCGATGGCGAGAAG
AACACCGTGTGGAGGCATGGAGCCCCTCCCAACTACGACCTGGTGAACAAGCTCTTCGAGGAAGAGAGGACCAAGGTACC
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--------------------------ACTAAACCTGTCCACACGACATGTTTCTTCACTACTAATGCTTC----------
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------------------ACCAAAGTTCTTC-----------------------------------CATGGTTAACACCG
A------------GTGCAACAGGAATGGCCGGAGGGGTCTCTGGAAGAG-AAGGTGCAGCGCCTGCTCAAAAGCTGGGAG
ATGGAGATGGTCCACAAGGTGCGCCCCGAGGACCAGAAGAGCGTCCACC---CTAGGAATTACTCCGCGAGCACCAACGG
TG---------AGACCTGATCCGC-------------AACACAATCGGCCGGCCGCGCCCCTC--AAAAATGA-------
-----------AATAATACCGTGTGC-----------------------------GCTTGCAGGGCTGAAGCCTCTGACG
CGGGAGGAGGTGACCGCCATCGGCGGCTACAACGCGTTCCTGGCGACCAAGCTGCCGCCGGAGCACCGCATCTACGACCC
GGACAAGGAGACGGTCGACTCCGGCATGTCGACGTTCCTCACGGCGTTCCCCAGGGGCTTCGCCATCGAGGTGCTGGACG
TGTACAG---CGGCCCGCCGAGGGTCGCCTTCAAGTTCCGGCACTGGGGTTACATGGAGGGGCCGTTCAAGGGCCACCCC
CCTCACGGCCACCGCGTCGAGTTCTTTGGCGTCTGCATTTTCCACGTGAGTTCCACAGTACTC-----------------
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------------------------------------------------------------------------GTGTATCA
TTGTCATTCAAAGTT---------CAGATTTACAGTAAACCAGTAACC--------------------------------
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--------GAGAAAACACTGTCGCGTTTCTGTGCAACAATGTG--ATGATAGGTTGACGACGACACGAGGGTGGAGAAGG
CCGAGTACTTCTACGAGCGTGGCAACTTCCTCGCGAGCTTCTTGATATCCTAAATCGGCTTCAAATTGACCAAGTCCACC
AAATCGATCCCCCTCATCCCACTCTCGTCCTCCGTTTCTCGCGTTTGAGTTGTCGCTTTCATCCACTTTTGCTCCCTGTC
CACGCCGCTATCCTTGTCCGGCATCGTAGATGTCGACACCGAGCACCCCGTCCCCCACCGCCTCCATGTGGGGGTACCGA
CCATCGTCTCTTGCAAGGCGGAGAACATCGCTCGAACAGATTGGCGCAACCGGCAGCGCGTAGGGAAGTTACGAAGATGG
TAGCTGCGGAGAGGGGAGTGGCGGAGAAGGCTAGAGACATGGATATATGTATGTCTAGTCTGGCAACCGCCTCCGTGTCG
TCCGCCGTGAAATAACAAGGCGCCAAACTCTGTTCCACCACCCAAATGGGCCATCCCGGATGGCTGGACGGAAGACGTCG
CTGCCGCGGAGACAATGTAGGAGTCGCCGCAATTCCAAAGGTTGCGGACAACATTGTGAAACGTCGGCGCCGTGCAGGCC
CACCTGTTATTCAACGATATGCCCGACCAAGACCAGGTACATTCTTGCCCCATATGACATTGAATCGCATGCTTCGTTTG
TTGCACATGCCATTGGATAAATCTAGGGATGTAGTTTTATTGTGGTGCATATTGTAGGACACAATTATGATGGACATGAT
ACATGATGGTCAAGAGTCTATGCATTATGACTTATTGATACCAATTCCCCATGTATGAAGTCGGGCAAACATCGTAAAAA
GGAAAGAACCAAAGGCAAGAGGTCCGGCATTCACAAGCCATGAGAATGTGTTGTTATGTGAATCTTGGTTGGCCACAAGC
ATGTATGCAATTTGTGGAACCGAGCAAAAGGGTGTTAAGTATTGGTAAACAAAATCCACAAATACTACTATGAACACAAG
AAGTATGTGCAGCCGAACCCTATCCATACCACTCGCAGTGAGGGCTCTTTCTAATATAGATGGTCCATGATCCAAGAAAG
CGTCAAAAAGTTT
>chr3D_745
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------------------------TCACTGCAGACTTACTAGCAATGAGTGGACACGCCTCACTGCTACAGGGACGAGTC
ATGGA--------TTGGATTGGTGGGTATCATATG-CTAGTCCTTTTTCCATGCAGTGACGTCTGCGATGATGTGGTTCT
TCTTCTCTAGTCTGTACATGTGG-TTTTTCCTACAAGTAGGGAATCGATCGTTTATTAGATTTGCAGTCTTCATCCAAAC
ACAACCCACG----------------------------------------------------------------------
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-------------------------------------------------------------TTGCCCCTTGGATTAAGCC
GAACGCCATTAGCTATGGCTTCTGCTGA---AGGA---GGCGACAAGTACCGGTCGTTCCTGCACGGCGACGGCGAGAAG
AACACCGTGTGGAGGCATGGATTCCCTCCCAACTACGACCTGGTGAACAAGCTCTTCGAGGAAGAGCGGACCAAGGTACC
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--------------------------AATAAGCCTCTCCACACGACATGTTTGTCC---ACTAATGCTTC----------
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------------------AGTATAGTTCTTCAGCCCACACATCCATGTTTCTTCCAACGTTGTTCACATGGTTAACACTG
A------------CTGCGACAGGAATGGCCGGAGGGGTCTCTGGAGGAG-AAGGTGCAGCGCCTGCTCAAGAGCTGGGAG
ATGGAGATGGTCCACAAGGTGCGCCCCGAGGACCAGAAGAGCGTCCACC---CCAAGAATTACTCCGCGAGCACCAACGG
TG---------AGACCTGATCCGC-------------AGCACAATCGGCCGGCCGCGCCGCTC--AAAAATGA-------
-----------AACGAAACCATGCGC-----------------------------GCTTGCAGGGCTGAAGCCTCTGACG
CGGGAGGAGGTGGCGGCCATCGGCGGCTACAACGCGTTCCTGGCGACCACCCTGCCGCCGGAGCACCGCATCTACGAC--
-------------------TCCGGCATGTCGACGTTCCTCACGGCGTTCCCCAGGGGCTTCGCCATCGAGGTGCTGGACG
TGTACAG---CGGCCCGCCGAGGGTCGCCTTCAAGTTCCGGCACTGGGGCTACATGGAGGGCCCGTTCAAGGGGCACCCC
CCACACGGCCAGCGCGTCGAGTTCTTTGGGGTCTGCGTCTTCCATGTAAGTTCCACAGTATA------------------
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---------------------------------------------------------------------ATTGTGTATCA
ATGTTATTCAAAGTT---------CAGATTTACAGCAAGCTAGTAACC--------------------------------
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--------GAGAAAACACTGTCGCGTTTCTGCGCAACAATGTG--ATGATAGGTTAACGAGCACACGAGGGTGGAGAAGG
CGGAGTACTTCTACGAGCGTGGCAACTTCCTCGCGGGCTTCTTGA-----------------------------------
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>chr5D_908
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------------------------------CTACAAATAGGAAATCAACCGTTTATTCGACTCGCAGCCTTCACTTATCC
AAATACGAGCACTTGGTTGAT-----------------------------------------------------------
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--------------------------------------------------------------------CTGACCCGAGCC
GAAGGCTACTAGCCATGGCCTCTGCTGC---AGGAGTTGGAGACAAGTACCGGTCGTTCCTGCACGGCGACGGCGAGAAG
AAGACGGTGTGGAGGAATGGAGCCCCTCCCAACTACGACCTGGTTAACAAGCTCTTCGAGGAAGAGAGGACCAACGTGCT
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------ACCTATCCTTTCCGCATGCCATATGTTTTCCTTTCTCCGCGATCCCATGGTTCC
ATGATATAAGCTATATTTATGTAACTAGT---------------------------------------------------
--------------------------------------------------------------------------------
A------------GTGCAACAGGAATGGCCCGAGGGATCTCTGGAGGAG-AAGGTGCAGCGCTTGCTCAAGAGCTGGGAG
ATGGAGATGGTCCACAAGGCGCGCCCCGAGGACCAGAAGAGCGTCGTCCGCTCCGACAACTACTCCGCGAGCACCAACGG
TG---------AGTGAGACCG--------------------------------CGCGGCACGGCCGATTTTAGCAGGACA
CAGAGGCAAACAACGAAACCAA---------------------AACCACA-A----CTTGCAGGGCTGAAGCCTCTGACG
CGGAAGGAGCTGATGGCCATCGGCGGCTACAACGCGTTCCTGGCGACCACCCTGCCGCCGGAGCACCGCATCTACGACCC
GGACAAGGAGTCGGTCGAGTCAGCCACGTCCACCTTCCTCACGGCGTTTCCCCGGGGCTTCGCCATCGAGGTGCTCGACG
TGTACAG---CGGCCCGCCCAGGATCGCCTTCAAGTTCCGGCACTGGGGTTACATGGAGGGGCCGTTCAAGGGGCACCCC
CCACACGGCCAGCGCGTCGAATTCTTTGGCGTCTGCATCTTTCATGTAAGTACTACGAAACTAACCGGAGGGCAACGCAC
CTTCTGCTGCGCCGTTCTTCGGTTTTGGAATTAATTCTATGTTCAATCCAAGAGTTATTATGGCAATTTACATCCCATGC
ATTCCGTGAAGGTTTTTTCAGGTTTTATTACCTTATTCGTTTTCATATTTGTTTCTATTTTCTAATTCATGAATATTTTT
TAAATTTATAAACATTTTCTGAAATTAGAGAACATAATTTAATTTTTCGAATATTAAAAAAACATGAATGTTTTCTCCAA
AATTGTGAACATTTTTTAACATCAATGATTTTTTTTTTCATATTCATGAACAGCTTTAAATTTACAAATTTCTTAATCTG
TGAACACTATTTGAAATTTGTGACCATATTGAAAAATGCATGAACAATTTTTCTAACTCATGGATATTTTCCCTATTTGT
GAAGAATTTATTAAATTTATGAACATTTTCTAAATTCAAGAATAATTTTTAAAATTTACAAAAAATCCAATGTTTTCATT
TTTAAGTGTTTTAATAGAATGTCGGTTTCGGTACGGGACGACCAACCCCTTACTAATGGGGTTCACTGTGAATTAAAAAA
ACTGAAGCTCTACTAGGTCTCTATTCCTAGGAATCTTAGTACTTGTAAGAAGGATTTGTGGCCATACATAGTTTGTATGT
TTGTTGTTCCAAGTT---------CAGTACAACAGAAACACTTCTAGGCTTATAGCTCAACCTGGGTGTAAACACTCTCT
TATCTACTCTCTTCCTAAATATTACCTTATTCGTTTTCCTATTTGTTTCTATTTTTTAATTCGTGAATATTTTCAAATTT
ATAAACATTTTCTGAAATTCGAGAACATAATTTAGTTTTTCAAATATTAAAAAAACATAAATGTTTTCTCCAAAATTGTG
AATATTTGTTAACATCAATGTTTTTTTTTCATATTCATGGAAAATTTTAAATTTACAATTTTTTAAATCTGTGAAGACTA
TTTAAAATTTGTGACAATTTTGAAAAATGCATGAACAATTATAAAACTTGTGAACAATTTTTCAAACTCATGAATATTTT
TTCCATATTTGCGAAGAATTTATTAAATTTATGAACATTGTTTAAATTCAAGAATATTTTTAAAAATTTATGATTTTTCA
AAAAGATTACAAAAAAATCCCAATGTTTTCATTTGTAAGTGTTTTAATAGAATGTCGGTTTCAGTATGGGACCACCAAAC
CCTTACTAATGGGTTCACTTTGAATTAAAAAAAACTAAAGCTCTACTAGGCCTCTATTCCTGGGAATCTTCGTACTTGTA
AGAAAGATTTGTGGCCACACATAGTTTGTATGTTTGTTGTTCCAAGTTCAGTACCACAAAAACACTTCCAGGCTTGTAGC
TCAACCTGGGTGTAACACTCTCTTATCTACCATCAATTTTTTTTGTGGGAATAACTTTCGATCTATTCATCAACTGAAGG
TAGTACAAAGAATACCAGTAGTAAAAAGTACATTTAGGTACGTAGACCACCTAGCGACGACTACTTGCACTGGAGCGAGC
CGAAGGCGCGCCGCCGTCTTCGCCCCTACCTCATCGAAGCCGGGCAAACCTTGTTGTAGTAGACAGTCGGGAAGTCGTCG
TGCTAAGGCCCCATAGGACCAGCGCACCAGAACAACATCCGTTGCCGTTGAAGAGAAGCGTAGATCAGAAGGATCCAATA
TGTAGACACACGAACACAGACGAACGAAGACAAGATCCACATGGATCCACCGAAGACAAACGCCGACCGAATCCCGTAAG
ATCCACTGGAGACAAACCTTCATACGCCCTCCAATGATGCTAGAAACACTATCGGAACGGGGACAAGGCGGGGAGAACCT
TATTTCATCAGCAGAGAGCCGCCGCCGCCTCGCCTCTCTGAGCAGAACACAAACCCTAACAAAACTCAAAAGAGTATGAA
AAAACGGAGCCCTCCCGCCGGCAAGGGCCGGGATCCACCATGCCTCCATGGCCGTAAGACCATAGAAGACGAGGTAGACC
GACGGCGGCACCGGCGGGAGGCACAAGAAACCCTAGCCAAGGGGTCCTCTTTTCTTCCCGTGGAAGAAAGAAAACTAAGC
TTTATCTACCATCAATTTATGCATTGCAATCTGTCCATATACTTTTCTCTTCTTCTCTCTTCCAAACGAAACAACATAGA
TGACTTCAAATTTTGCACAGCCACAAAACATTATATATAAATAAAATGTATGACAAAGATTTCGGATATTTTGGTCCACC
AAAAATACTTAATATAATATTTCTTGGTCAAAAAATCTCAGTTTATATGTTTATGCTAGACAAAATTTCCTAAAGTAATG
TTACCTATTGTATTTCTAAGATTTGTTCACCTGCAAAATTTGAGTCTATATGTTGTTTTATTTGGGAGAAAAAAACTTTT
GTATAGTAAGTTAGTTAGTTTTTCTTTAAAGGAAACAGTAGAACAATCGTTCTACGGTATATATCAAAAAAGAGTGTAGT
AAGTTAGTTAGTTAGCACGAATCTCGATATAGTCATGGAAGGTGTTGATAATGGGTGTGGTACAAGCAGATTCACAAAAT
CCATTCTGGAGAAAACACTCATGATTATCTCTCCAACAATGTCTAATGATAGGTTGATGAGGAGATGAAGGTGGCCAAGG
TAGAGTACTTCTACGAGCGTGGCAACTTCCTCGCGGGCTTCTTGA-----------------------------------
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>chr3A_963
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-----CCAAG----------------------------------------------------------------------
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-------------------------------------------------------------TTGTCCCCTGAACTGGGAC
GAAGGTAATTAGCCATGGCGTCTACTGAAACAGGA---GGTGACAAGTACCGGTCGTTCATGCACGGCGAGGGCGAGAAG
AACACCGTGTGGAGGCATGGAGCCCCTCCCAACTACGACATCGTGAACAAGCTCTTCGAGGAAGAGAGGACCAAGGTACG
CACC----------------------------------------------------------------------------
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--------------------------GCTAAACCTATCCACGAG-----------------------------TAGGTCC
ATGATGTACCCTGAATCAC----------ATCAATTTCTACTGATTATTAC-----------------------------
-----------------------------------------TACTAGTATTTTTAAGCTTTGTTCACGTGATTAAC----
A------------CTGCAACAGGAATGGCCGGATGGGTCTCTTGAGGAG-AAGGTGCAGCGCCTGCTCAAGACCTGGGAG
ATGGAGATGATCCACAAGGTGCGCCCCGACGACCAGAAGAGCGTCCACT---CCCAGGGATTCACCGCGAGCACCAACGG
TG---------AGACGCCGCCGCACAGTGGCACCCTTCTGCCCATCCATCCACCGATCTTGCGAC-ATAATCA-------
-----------CATAAGATCGTCTGCCTTGCAACGGCACCAACGCTTGCTTA----TTTGCAGGGATGAAGCCTCTAACG
CGGAAGGAGTGGACTGCCATCGGCGGCTACAACGCGTTCCTGGCGACCAAGCTGCCGCCGGAGCACCGCATCTACGACCC
GGACAAGGAGACGGTCGACTCCGGCATGTCGACGTTCCTCACGGCGTTCCCCAGGGGCTTCGCCATCGAGGTGCTGGACG
TGTACAG---CGGCCCGCCGAGGGTCGCCTTCAAGTTCCGGCACTGGGGTTACATGGAGGGGCCGTTCAAGGGGCACCCT
CCTCACGGCCAGCGCGTCGAGTTCTTTGGGGTCTGCGTCTTCCATGTAAGCTTGGCAGCTTTGATAGTACAGTCAAGTT-
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---TTGTTCAAAGTTGGGACTTCACAGAATCACAGTAACGGTCTAACA--------------------------------
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--------GAGTAGACACTGACATGGGTGGCTGCAACAATGTG--ATGACAGGTTGATGAGGAGATGAAGGTGGAGAAGG
CGGAGTACTTCTACGAGCGCGGCAACTTCCTCGCAAGCTTCTTGA-----------------------------------
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>chr3B_963
CTAAATCCACTTCAAATTGACCAAGTCCACCAAATCGACCGCCCTCCTCCCACGTTTGTCCTCCATTTCTCGCATCTGAG
CCATCGCTCTCATCCACCCTTGCTCCTCGTCCACGCTGTTGTCCTCGTCTGTCGTCATAGATGTCGACGCCGAGTATCGC
GTCCCCCACCCATTGCCATGGATGATGCCTCGGCGGAGTCTGTGGGGGTCCCGACCATCATCTCTTGCAAGGCTTAGAAC
ATCATTTGAAGGGGTCGGCGCAACCATGGAAAGCAACGGGGACGGTAGCTGCGGAGAGGGAAGATGCAGAGAAGGCATGA
GACATGGATATGGGCACGTCCAGTCTGGCAACCGCCTCCGTGCCATCTGTCGTGACCGCGAGAAAAAACAAGGCACCAAA
TTCCATTATGCCATCTGAATGGGCCATCACGGATGGCTTGACAGAAGACGTCGCTGCCGCGGACACAGTGTACGAGTCAC
CCCCAACTCCAAAGGTAGTGGACAACATTGTGAAATGCCGGTGCCGTGCGTGCACACCTGACGATATGCCAGACCAATAC
CAGGTACATTCCTGCCCCATATGCCATTGTATCGCTTGCTTCGTTTGTTGCACATACCATTGGATCAATCTAGGATGTGG
TTTCATTGCAGTGCCTATTGTAGGACACATTCATGATGAACATGATACATGATGGTCAAGAGCCTATGCATTATGGCTTA
TGTGATACCAATTGCCCCATGTATGAAGTCGGACAAACATTGTGCACTAAAAAAGGTACCAAAGGCAAGATGGTCAGCAT
TCACAAGCCATGAGAATGTGTTGTTGTGTGAATCTTGGTTGGCCACAAGCATGCATTCAATTTGTGGAACCGAGCAAAAA
GACGTTAAGTATTGGCAGGGCCGGCCCTGGGGCATGGGCGGTGGGGCGGCGGCCCAGGGCCCAGGCGGGAGGGGGGCCCA
TGATGTAGTACATATACATACTAATGCCCAGCAAAAAATGATAAAAAAACAAGATGGACTAGGGCGCGAGGCCCATGCGA
TCGATTACGAAGCGTTACGCTAGCGCCAGCGATCGGTACCGGCTGCTCATTTTCTTTTCCTTCGTCTGGAGTCTGGACGG
TTGGTCTCTAATCTCTTCGTCTTGCCTGCCACTCGGCGCTCGGCGCCTTTCCGTCTCGGCCGCTGCCGGCTTGCCGCTGT
GCGCACCGCATAGCAGTCTGGTAACCCAAAGTCTGCAACGAGCCAACGAGGTAATCCATGATCCATTCCATCTGTCAGTT
TCTTCAGCCTGTATATGTATCCATGATCCATCCATGTTCCTGATGACCTAATCCATCCCCCCAGATCCCAATTTGACAAT
TTCAGTAGTACGTACGTATTCAACTATCCACATGTATGTCTAGGGTTCCAATCATCCGATTATAAATTCTTAAGTCTTTG
TACCCTCTTTTCTTCATGATTTTAGGACATTATCCTGCCATGTTGCCTAAGAAGAAGATGTTGGTGCTGAAAAAAGGAGA
AGAAAAAAAAGAAAGTGTTATTGCATCAAGAAACGTCCGAAGAAACTTTTTTTGAAGCACTGAAGTATTATTGTTGTCGA
TGGAGTCAGTTGAATTTGGTTCTTATTTGAGGTAATCATGGCATGTTAGTTTTATTTTGCCATCTTTTTAGTATTATTGT
TGTCGATGGAGTCGGTTCGAATTTAGTTATTATTGTTGTCGATGGAGTCAGTTGAATTATTATAGTCAAATTTGGTTGAA
ATTTATATAGGGGCCCATGTCACCGAGTTCGCCTAGGGCCTTCCAAAACACAGGGCCGGCCCTGAGTATTGGCAAACAAA
ATTTACAAACACTACCATGAGCACAAGAAGTATGTGAAGCCGAACCCTATCCATACCACCGGCATTGATGGCTCTCTTCA
ACATAGATGGTCCACCATCCAAGAGAGCGTCAACAAGTTTGCGGTTACTATACACAAGTGGTCGGCTGGAACCAAAGTGA
CACTAGAGTTCAAAGGGAGAAGATGGAGTTCGAGTGGGAGAGGGTCAAAGAGAAATTGAACATTGAGAGGAAGAAGATAA
ACAGGAAGAAGCAAGAGAAATTTGCAAAGTGAGAGCTTAAAGAGGAGCCACAATGAACGTAATTGAGCTCGAGAGAGAGA
GAAGTTGAGTTTTGCGAGGGACAAGAAGATTTTAGGATCATGTTGCGAGATCTAGCCTCTTAGATGAGGAAAGGAAGAAG
TGGTTTCACATGAAGGAGATCAAACGTGCTCAACAAAAGACTCGATTGATTCATTTGTGTATCGCCCTATCTATATATCC
ATTGTAGAATTATATTTTGACATGTGTTGAAGTGGTTTATTTTGCTTTGTGGAATTGTTCAATTTGTGATGAATGGGTGC
TATGTGATGGACGTGCTAGTCACACACTCCAGTATAACCTTTTCAACCTGGCCTTGTATTTATCTTTACTAAATTCATCG
TCAAAGCCTTTTCTTTAGAAAAGTCCGTGCACCAGGTTCACCGGCCTGAAACCTTTTCAACCTGGTCTTGTATTTATATG
TTTACTAATTTCATCGTCAAAAGACCTTTAAACATCGCCGATACAATTTTGGTCTGTAGTTTGAACATATGCCAACGTGA
CAAAAAGGATAAGGAAAACGAGTGGACGCAGCTCAGTGCGACAGGGACTGGTAAGTGATTGGGTTGGTGGATGGCATATA
CTACTAGTCATGTTTTTCCAATGCAGTGACGTTCGCAATGATGCAGTTCTCTACTTTTTTTTTCTTTACCCCCTACATGT
AGGGCATCAGCCTTTCACTCGACTCTCAGCTTCTAAAATACTTCTGATTTCTACTACCAAGTTGTCCCCTGAACTGGGAC
GAAGGTAATTAGTCATGGCGTCTGCTGAAACAGGA---GGCGACAAGTACAGGTCGTTCATGCACGGCGAGGGCGAGAAG
AACACCGTGTGGAGGCATGGAGCCCCTCCTAACTACGACGTCGTGAACAAGCTCTTCGAGGAAGAGAGGACCAAGGTACG
CACC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------ACTAAACCTATCCACGGAGG----------------AAAG--------AGGTCC
ATGATGTACCCTGAATCAC----------ACCAATTTCTACTGATTATTACTCTCTAGTATAAAAAACGCTCTTATATTA
TGGGACGAAGGA---------------------------------AGTATTTCTAAACTTTGTTCACATGATTAAC----
A------------CTGCAACAGGAATGGCCGGAGGGGTCTCTCGAGGAGAAAGGTGCAGCGCTTGCTCAAGACCTGGGAG
ATGGAGATGATCCACAAGGTGCGCCCCGACGACCAGAAGAGCGTCCACT---CCCAGGGATTCACCGCGAGCACCAACGG
TG---------AGACGCCGC---ACAGCAGCACGCTTCTAC---TCCGTCCACCGATCTTGCGAC-ATAAGAGAGACGGC
CTTGT--------------------------AACGGCACCAACGCTTGCTTA----TTTGCAGGGATGAAGCCTCTGACG
CGGAAGGAGTGGACGGCCATCGGCGGCTACAACGCGTTCCTGGCGACCAAACTGCCGCCGGAGCACCGCATCTACGACCC
GGACGAGGAGACGGTTGACTCCGGCATGTCGACCTTCCTCACGGCGTTCCCCAGGGGCTTCGCCATCGAGGTGCTCGACG
TGTACAG---CGGCCCGCCGAGGGTCGCCTTCAAGTTCCGGCACTGGGGGTACATGGAGGGCCCGTTCAAGGGGCACCCT
CCTCACGGCCAGCGCGTGGAGTTCTTTGGGGTCTGCATTTTCCACGTAAGTTTGGCAGCTTTGATAGTACAGTCAACTT-
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---TTGTTCAGAGTTGGGACTTCACAGAATCACAGTAACAGTCTAACA--------------------------------
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--------GAGTAGACACTGACATGGGTCGCTGCAACAATGTG--ATGACAGGTTGATGAGGAGATGAAGGTGGAGAAGG
CGGAGTACTTCTACGAGCGCGGCAACTTCCTCGCAAGCTTCTTGA-----------------------------------
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>chr1B_995
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--------TTAGCCATGGACTCTGCTGA---AGGA---GGAGACAAATACCGGTCGTTCCTGCACGGCGACGGCGAGAAG
AACACGGTGTGGAGGCATGGAGCCCCTCCCAACTACGACCTGGTGAACAAGCTCTTCGAGGAAGAGCGGACCAAGGTACA
TACTCCCTCCGTCCGAAAATACTTGTCATCAAAATGGATAAAAAGAGATGTATATAAAACTAAAATACGTCTAGATACAT
GAGATGCACGCACATAAAATGTCCGGATATACACGCGGGGTTTTTGTTTCGAATTTTTCAACTTTTCGAAATGTATATTT
CGACAATAGGTGCATATGCACCTAGGAGCCAAAGGCAATTACCGCTCTAGATACATTTTCTTTTATTCATTTTGATGACA
AGTATTTTCGGACGGAGGGAGTACTAATTAAACCTGTCCACGGTCG----------------AATGCTTCCTTCAGTGGT
GTG-----------------------------------TACAGATTATTAGCTTGAACTGCCAAAACGTCTTACATTAGT
GAACAGACGTGGTAGCAGAGTAAAGTTCTTCATGTTGGAAGTT------------AAATTTGTTCACATGCATGGCTTGG
-------------GTGCGACAGGAATGGGCCGAGGGGTCTCTGGAAGAG-AAGGTGCAGCGGCTGCTCAAGACCTGGGAG
ATGGAGTTGGTCCACAAGGTGCGGCCCGAGGACCAGAAGAGCGTCAACC---CCAAGAACTACTCCGCCATCACCAACGG
TACAAAAATCAACACCTCAAC------------ACATAGTACAATCGATCGACCGGCCCAAAAAAATAACTGA-------
-----------AACGAAACAAA---------------------ACTTTTCTTGTTGCTTGCAGGGCTGAAGCCGCTGACG
CGGGAGGAGGTGACGGCCATGGGCGGCTACAACGCGTTCCTGGCGACCACGCTGCCGCCGGAGCACCGCATCTACGACCC
GGACGCCGAGACGGTGGAGTCGGCCACGTCCACGTTCCTCACGGCGTTCCCCCGGGGCTTCGCCATCGAGGTGCTGGACG
TGTACAG---CGGCCCGCCCAGGATCGCCTTCAAGTTCCGGCACTGGGGCTACATGGAGGGCCCGTTCAAGGGCCACCCT
CCGCACGGCCGCCGCGTCGAGTTCTTCGGCGTCTGTGTCTTCCACGTGAGTTC---------------------------
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>chr6D_997
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----------AGCTATGGCGTCTGCTGAAACAGGA---GGCGACAAGTACCGGTCGTTCATGGACGGCGAGGGCGAGAAG
AACACCGTGTGGAGGCATGGAGTCCCTCCCAACTTCGACGTGGTGAACAAGCTCTTCGAGGAAGAGAGGACTAAGGTACC
CACAATATGTTGT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TCCACGAG-----------------------------TACACAC
GCCCCATGTGCTTCTTCTATGTGTGTTGGAACGAATTGTACTTATTTTCAA-----------------------------
-----------------------------------------ACATAATTTGTTG-----TTGATCACGTGTACATGACTA
ACGCCGCATGCATGCGCCACAGGAATGGGCGGAGGGGAGTGTGGAAGAG-AAGGTGCAGCGGTTGCTCAAGACATGGGAG
ATGGAGATGTTCCACAAGTTGCGGCCCGAGGACCAGAAGAGCGTGCACT---CCCAGGGATTCACCAGCAGCACCAACGG
TG---------AGACCTCACT------------CCGTCAGTCCGTCCATCGATCTTTCTGGCCAC-ATAAGA--------
------------------------------------CACCAACGCTTTTCAC--------CAGGGATGAAGCCTCTGACC
CGAAAGGAGTGGACCGCCATCGGTGGCTACAACGCGTTCCTGGCAACCAAGCTGCCGCTGGAGCACCGCATCTACGACCC
GGACACAGAGACGTTCGACTCCGGCATGGAGACGTTCCTCACGGCGTTCCCCCGGGGCTTCGCCATCGAGGTGCTCGACG
TCTACTGCACCGGCCCGCCCAGGGTGGCCTTCAAGTTCCGGCACTGGGGGTACATGGAGGGGCCGTTCAAGGGCCACCCT
CCTCACGGCCAGCGCGTGGAGTTGTTTGGCGTCTGCATTTTCCATGTAAGTT----------------------------
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>chr6B_1218
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------------------ACAGGAATGGGCGGAGGGGAGTCTGGAAGAG-AAGGTGCAACGGTTGCTCAAGACATGGGAG
ATGGAGATGTTCCACAAGGTGCGCCCCGAGGACCAGAAGAGCGTGCACT---CCCAGGGATTCACCAGCAGCACCAACGG
TG---------AGGCGTCATATACTT--------CGTCGTTCGGTCCATCGATCTTTCTTGCCAC-ATAAGA--------
------------------------------------CACCAACACTTTTCAT--------CAGGGATGAAGCCTCTGACC
CGAAAGGAGTGGACGGCCATCGGCGGCTACAACGCGTTCCTGGCAACCAAGCTGCCGCTGGAGCACCGCATCTACGACCC
GGACACGGAGACGTTTGACTCCGGCATGGAGACGTTCCTCACGGTGTTCCCCCAGGGCTTCGCCATCGAGGTGCTCGACG
TGTACTGCACCGGCCCGCCTAGGGTGGCCTTCAAGTTCCGGCACTGGGGATACATGGAGGGGCCGTTCAAGGGCCACCCT
CCACACGGCCAGCGTGTGGAGTTGTTTGGCGTCTGCATTTTCCATGTAAGTT----------------------------
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>chr3B_1387
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-----------------------------------------------------CGCGGCACTC--AAAAATGG-------
-----------AACGAATCA--------------------------TGCCCA----CTTGCAGGACTGAAGCCTCTGACA
CGGGAGGAGGTGATCGCCATCAGTGGCTATAACGCGTTCCTGGCGACCACCCTGTCACCGAAGCACCGCATCTACAACTC
GGGCAAGGAGACGGACGATTCTGGCATGTTGATGTTCCTCACGGCGTTCCCCAGGGGCTTCGCCATTGAGGTGCTAGACG
TGTACAA---TGGCCCGCCGAGGGTTGCCTTCAAGTTCCGACACTGGGGTTACATGGAGGGGCCGTTCAAGGGGCACCCT
CCACACGGCCAGAGGGTCGAGTTCTTTGGGGTCTGCGTCTTCCATATAAGTTCCACAGTATA------------------
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---------------------------------------------------------------------ATTGTGTGTCA
TTGTCATTCAAAGTT---------CATATTTACGGTAAGCCAGTAACC--------------------------------
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--------GAGAAAACATCATCATGGT--TCTCCAACAATGTG--ATGATAGGTTGACGAGGACACGTGGGTGGAGAAGG
CGGAGTACTTCTACGAGTGTGGCAACTTCCTCGTGAGCTTCTT-------------------------------------
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>SNPs
SSSSSSSSSSSSSSS-SSS-SSSSS-S-SSSSSS--SS--SSS-SSSS-SSSS-S-SSSSSSSS-SSSS--SSSSSSS-S
SSSS-SSSSSSSSSSSSSSS--SSSSS-SS-S--S-SSS-SS--SS-SS-SSSSSSS--SSSSSSSSS-S--S--SSSSS
SSSSSSS-SSS-SSSSS-SS--SS-SSSSSSS-SSS-SSSSS--SSSSSSSSS-SSS-S-S-SSSSSSSSSSSSSS---S
--S--S-SS-S----SSSSSSSSSSSSSS-SSSSSS-SSSSSSS-SSSSSSSS--SS-SS--SS--SSS-SSSS-SSS--
SSSSSSS-S-SSS-S-SS-SSS-SSSSSS--SSSSSSSSS-S-S-SSSSSSSSSSSSS-SSSSSSS-SSS-SSSSSSSS-
SSSSSSSSS-SSSSS-S-S-SSSSSSSS-SS--SSSS--S-SSS--SSSS-SSS-SSSSSS--S---SSSSSSSS-SS-S
SSSSSS-SS-S-SS-S-SS-S--S-SSSSSSS-SSSSS-SSSSSSSSSSSSS-SS-SSSS-SSSSSS-SSSS--SSSS-S
SSSSS-SSSSS-SSSS-SSSSSSSS-SSSSSSSSSSS-SSSSSSS-SSSSSS-SSS-SSSSSSSSSSSSSSSSS-SSSSS
SS-SSSS-SSSSSS-SSSSSSSS-SSS-S-SS-S-S-SSSSSSSS-SSS-SS-S-SSSSS-S-S-S-SSSSSSSSSS-SS
SSSSSS-SSSS-SSSSSSSSSSS---------------SS-S--------------------------------------
S----SSSS--SS----------------SS-S--S--------------------------S-----------------
-----------S-S-----S--SS---------------------------------S----------------------
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----------------------------------------------------------------------S---------
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----------------------------------------------------S---SS----------------------
--------------------------------------------------------------------------------
-------------------SS---------------------------------------------------------S-
----------------------------------------------------------------------S---------
-----------------------------------------------------S-S------------------------
-----------------------------------------------------------S--------------------
----------------S---------------------------------------------------------------
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--------------------------------------------------------------S-----------------
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--------------------------------------S-----------------------------------------
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------------------------------------------------------------S-------------------
-S-------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS
>forward_522
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----------------------CGATGCACACAGCCAACAAA--------------------------------------
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>reverse_6979
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------------------CGGCATCGTAGATGTCGACA------------------------------------------
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-------------
