>input_sequence_65544
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATGGCGTCTCTGCTT
CTCAAGGGCGTTCACAAGCGGCTGGGCCTGCCGTCCATCTCCATCTCCATCTCCTGCTCCTCCGCCGACGCCACCAACAT
CATCGCCTCAACCACCACCACCAACGGCGTCGGCAGCAGCAGCGGCCGGGCCATCGACCGCCACTCGCCGCGCCTCCGCG
ACCCACACCGCTCCTCCACCTCCAAGCCGCCAAGGCCAAGCACCAGTACCAGTAGCACCAAAGACTCGGCGTCCTCCGGC
GACTCCAAGCAGCAGC------ACGGT---CACGGCAAC------AACAACAAGAAGAAGAGCACCACTGCTGCTGCTGG
G---------------A------CTTCAGAGAAGAGGCTGGTAAGCCCGGCGACGTCGTCCAGGTTCCTCCTCAACTCCT
CCCGGCTGCAGTCCGACGACCTCGACGTCCTCGCGCTCCCCCCGCCACCGCCGCCGTCGTTCATCGACGTGTTCCCCGGC
GGCGAAG------GGAAGCCGCCGTCCTTCATCGACGCGTTCCCC---GGCGACGCCTCGCTCCCTCTTTACTTCGCGAA
GGAGG---CACCGTCGCCGGTACAGCAAGCAGAGACCTCCTCGTCC------TCCTCCTCTGCTTCGTCGTCGTCCGAGA
TCACATCCGTCC---AAGAAGAGGAGCAGCAGAAGGCGGCGGTGCTGGCGCGGTCGTCCACGACCACGGAGAGA---AGA
ACGACGCAGGTGGTGGTTTTGAGGGTGTCGCTGCACTGCAAGGGTTGCGCGGGCAAGGTGAAGAAGCACCTCGCCAAGAT
GGAGGGGGTGACGTCGTTCGACATCGACATCCCGAGCAAGAAGGTGACGGTGGTCGGCGACGTGACGCCGCTGGGGGTGC
TCACCAGCGTCGCCAAGGTCAAGCCCGCCCAGTTCTGGCCGTCGCAGCCGTACCCCCCGCGCGCCTCCGCGTCCTTCTGA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr3A_1_TraesCS3A01G526400
AAAACTAATAGTATCAGCCGCGTTACATGACAAAAATTGTGCGCGTGATTACACAGATTGTCGATTAGAATCTGTTGTTG
CTCATGCAACTGATCGATGTAGATCATGCACTGACTCCAGTTACTGACGGGCCTGATTCCACGACATGCATCTGCTGTCA
GTCAGTATGCAACGTGCATGCACTCTCTGCTGGTCTTGTCCCGTTGGTGGGTAGGTAGGTGAAGTAGTATAGCACTATCT
TCGTTTTGATTTACTAATCCTTAACATATTGTAGGTCATATGTAAATTATAAATTTAACTAATAAAATATAAGATATACA
TAATAAAATAATATCAAGAAAATACATTCAAATATGAGTGCAACCATATAACTTTGACAACCATATAATTTTGGCATGCA
TTAATATTTTGCTAGTCAAATATATTGTCAGACTTTGATCCGAAATACGATAAAACTATAAGCCAGACAAAGGTAGTAGT
CAGTAACCGAAAATGCTAAACGTACGGGGTTGTTACAAAGCTTTACGGAAACCTTCCCTGTAGTCCTCCCTCCCTAATTT
TCAGGTGGGTGGGGCCCCTCACTCCCCTTAATCCAATAATAATTTGACAACTCAAATCCATTATGTAAAACCGCCCGTCG
ATGTAGCATTACTCGCCAGTAATTCACTGATCAACTCACTCACAGCAG-GAGTGACTTCTAGCTCTAGTCTGACAAGGCG
TGCACGCGTGGACAACTAGCTGTGCCACGT-GGCTGGTGGCCCACGTCAACACAACCAGAGAGTGTTCCGTGGCAGCTTT
GGCTTTGACTTTGGCCCCTCCCTTCCTTCCAAAGTTGCAAGCTTGG-AAGCACGCGAGCCAGCAGTGGGCACACAGACAT
ACAAATACTAGAATACAAGCTGAAGAAGAAGAGAATCATCA-----TTCATTTCATTGTGCACCAGCACCACCAACCCAA
CCCGACCGAG-----ACCAAGAGACTCAGAGTAATCCGGCCGGG------------TTCCATTCCATGGCGTCTCTGCTT
CTCAAGGGCGTTCACAAGCGGCTGGGCCTGCCGTCCATCTCCATCTCCATCTCCTGCTCCTCCGCCGACGCCACCAACAT
CATCGCCTCAACCACCACCACCAACGGCGTCGGCAGCAGCAGCGGCCGGGCCATCGACCGCCACTCGCCGCGCCTCCGCG
ACCCACACCGCTCCTCCACCTCCAAGCCGCCAAGGCCAAGCACCAGTACCAGTAGCACCAAAGACTCGGCGTCCTCCGGC
GACTCCAAGCAGCAGC------ACGGT---CACGGCAAC------AACAACAAGAAGAAGAGCACCACTGCTGCTGCTGG
G---------------A------CTTCAGAGAAGAGGCTGGTAAGCCCGGCGACGTCGTCCAGGTTCCTCCTCAACTCCT
CCCGGCTGCAGTCCGACGACCTCGACGTCCTCGCGCTCCCCCCGCCACCGCCGCCGTCGTTCATCGACGTGTTCCCCGGC
GGCGAAG------GGAAGCCGCCGTCCTTCATCGACGCGTTCCCC---GGCGACGCCTCGCTCCCTCTTTACTTCGCGAA
GGAGG---CACCGTCGCCGGTACAGCAAGCAGAGACCTCCTCGTCC------TCCTCCTCTGCTTCGTCGTCGTCCGAGA
TCACATCCGTCC---AAGAAGAGGAGCAGCAGAAGGCGGCGGTGCTGGCGCGGTCGTCCACGACCACGGAGAGA---AGA
ACGACGCAGGTGGTGGTTTTGAGGGTGTCGCTGCACTGCAAGGGTTGCGCGGGCAAGGTGAAGAAGCACCTCGCCAAGAT
GGAGGGGGTGACGTCGTTCGACATCGACATCCCGAGCAAGAAGGTGACGGTGGTCGGCGACGTGACGCCGCTGGGGGTGC
TCACCAGCGTCGCCAAGGTCAAGCCCGCCCAGTTCTGGCCGTCGCAGCCGTACCCCCCGCGCGCCTCCGCGTCCTTCTGA
ACTCAACAACTATCTCTCAAG--TCTGAACCACATCATCAGGATTAGCAGAC--TAGGTAGCCATCATCAGTGTCTGTCC
TCCATGCTGTGTTGACGGTGGTCTTGGGCCTCGGCATCCTTGTATCTGGCTCGTACGACGTCTCTTGAGTGCTAGTCCGG
TGTGTGTGGTCTTCGCCGGTTTCCCTTA-------------------------------ATTAACTGATGCATGTATGGT
TTTTGGGTCGGGTTTCCTTTATTAACCGGATCAACTTTCTTCTTCTATATGCAAATGCGGGAGCTCCCCGCCCTCGGACA
AAGTTTCG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TAAAAAAAAGCGCGTGCCTGAAAGAAAAGAATCGACGGCTGCTGCC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ACGTATGTACGTCAGGCTAGCCGCAGCTCT
ATCTTTCTTCCTTTTTTTTG---TGAAAGAAAAGAAACGAAGCTGAATTTTCTATACGTGTGTTCTGAATTGA-------
---------GATATACGCCCTCCGTCTCATAATATAAGAACGTTTTTTACGTTAGGTAGTACAATACAATAGGTCATGTA
CTGTAATAATAGTATTTTTTTTTTGACCTTGCTCTGCTTTCTTGTATGAATTTCCAAACAAAGCATATA-CTAGTCTAGT
CGATCGCGCACTCAAAATATCAAGATT---------------------------------TGAGAGAAAAGAAAGGAGGA
AATTAAAGTTGAGTGGAGAAGAAAGTGTAGAATCAAACTTATCCCGGGTGGTGCC-GTTTGTCATTGTTTAGTATGTAAC
ATTTTGATTCTATTCGGGTGGACGACATGGATGGTTCTCACAAAGATGACTACGAGTATCACATTTTTCTTTTGGATTAT
ACATATCTTATTATTCTCCATCCACCACTAGCAGCAGCATAAGTGCAAAAGCCAAGATATCCATCCATCT-AAGTTGATT
GTAATCCATCATTAGCCGCCGTGTAGTAGTACATCAACAGCAGTGAAAGAGCAATTGGAAGCTTAGACGTCAACATTCTT
CACATTTTACTCTGATCAGCTAAAGAAAACATCTTGTTTCCCTATC
>chr3B_655
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GCCAGTAGCTCAATGACCGACTCACTCACAAACCTGAGTGACTTCTAGCTTTACTCTGACATGGTG
TGCACACGTGGTCAAGAAGTTGTGCCACGT-GTCTAGTGGCCCACGTCAACACAAGCAGAG--TACTCCGTGGCAGTTTT
GGATTTGGCTTTGGCCCCTCCCTTCCTTCCAAAGTTG----------AAGCACGCGAGCGGCAGTGG-----GC--ACAT
ACAAATACA---ATACAAGCCGAAGAAGAAGAGAATCGTCG-----TTCATTTCATTTCATTGT-GCACCACCAACCCAA
CCCAACCCCAACCCAACCCAGAGACGCAGAGTAATCCGGCCGGCCATCTTGCTCCATTACAGTCCATGGCGTCTCTGCTT
CTCAAAGGCGTGCACAAGCGCCTGGGCCTGCCGTCCATCT------CCATCTCCTGCTCCTCCGCCGAGGCCACCAACAT
CATCGCCTCAACCACCACCACCAACGGCGTCGGCAGCAGCAGCGGCCGGGCCCTCGACCGCCACTCGCCCCGCCTCCGCG
ACCCACACCGCTCCTCCACCTCCAAGCCGCCAAGGCCAAGCACCAGCGCC---AGCGCCAAAGACTCGGCGTCCTCCGGC
GACTCCAAGCAGCAGCG------CGGC---CACGGCAACAACAAGAAGAAGAAGAACAAGAGCACCACCGCTCCTGCTGG
G---------------ACTAAATCTTCAGAGAAGAGGCTGGTAAGCCCGGCGACGTCGTCCAGGTTCCTCCTCAACTCCT
CCCGGCTGCAGTCCGACGACCTCGACGTCCTCGCACTTGCCCCGCCGCCGCCGCCGTCGTTCATCGACGTGTTCCCCGGC
GGCGAAG------GGAAGCCGCCGTCCTTCATCGACGCGTTCCCCCCCGGCAACGCCTCGCTCCCTCTTTCCTTCGCGAA
GGAGG---CACCGTCGCCGGTACAGCAAGCAGAGACCTCCTCGTCC------TCCTCCTCTGCTTCGTCGTCGTCGGAGA
TCACAGCCCTCCAAGAAGAAGAGGAGCAGCAGAAGGCGGCGGTGCTGGCGCGGTCGTCCACGACCACGGAGAGA---AGA
ACGACGCAGGTGGTGGTTTTGAGGGTGTCGCTGCACTGCAAGGGGTGCGCGGGCAAGGTGAAGAAGCACCTCGCCAAGAT
GGAGGGCGTGACGTCGTTCGACATCGACATCCCGAGCAAGAAGGTGACGGTGGTCGGCGACGTGACGCCGCTGGGCGTGC
TCACCAGCGTCTCCAAGGTCAAACCCGCGCAGTTCTGGCCGTCGCCGCCGCAACCGCCCCGCGCCTCCGCGTCCTTCTGA
ACGCGCCGGCGATCTCCGCTCTCTCTGAATCACAGCATGATGATTAGCAGAGCATAGCTAGACATCA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ACGTACGTACGTCAGGCTAGCTGCAGCTCT
ATCTTTCATCCTTTCTTTTTCATTGAAAGAAAAGAAACGGCACTGAATTTTCTACATTTACTGTAGTGATATGCTACAGT
TACTGTACTGATATTTTG--------------------------------------------------------------
---------------------TTTACCTTTGC-CTGCTTTCTCGTCTGAATTTCGATACAAAGCATATAACTTGTGTAAT
CGATCGTGCACCCAAAACATCGAGATTCATAAATACTCGCAAAAAAAAAAAATGGAGATTCGAGAGAAAACAAAGGGGGA
AATTAAAGTTGAGTGGAGAAGAAAGTGTAGAATCGAACTTAT---------------TTTGTCATTGTTTAGTAC-TAAC
ATTTTGATTCTACTCCGGTGGACGACATGGATGGGTCTCACAAAGATGACTACGAGTATCACATTTTTCTTT-GGATTAT
ACATATCTTATTATTCTCCATCGACCACTAGCAGCAGCACAAGTGCAAAAGCCAAGATATTCATCCCTCTTAAGTTGATT
GATATCCATCATTAGCCGCCGTGTAGTAGTACATCAGCAGCAGTGAAAGAGCAATTGGAAGCTTGGACGTCAACATTCTT
CATATATTACTCTCATCAGCTAAAGAAATCAACTTGTTTCCCTGTC
>chr3D_692
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TGACTTCTACCTCTAGTCAGACAAGGTG
TGCACACGTGGACAACAAGTTGTGCCACAGGGGCTGGTGGCCCACGTCAACACAAGCAGAG--TGTTCCGTGGCAGCTTT
GGCTTTGGCTTTGGACCTTCCCTTCCTTGCAAAGTTGCAAGTTCCGAAAGCACGCGAGGCAGCAGTGGGCACGC--ACAT
ACAAATACC---ATACAAGCCGAGGAAGAAGAGAATCATCA----------TTCATTTCATTGT-GCACCACCAACCCAA
CCCATCCCAG-----ACACAGAAACTCAGAGTAATCCGGCCGGG------------TTCCATTCCATGGCGTCTCTGCTT
CTCAAAGGCATGCACAAGCGGCTGGGCCTGCCCTCCATCA------CCATCTCCTGCTCCTCCGCCGCCGCCACCAACAT
CATCGCATCAACCACCACCAGCAACGGCGTCGGCAGCAGCAGCGGCCGGGCCATCGACCGCCACTCGCCGCGCCTCCGTG
ACCCACACCGCTCCTCCACCTCCAAGCCGCCAAGGCCAAGCACCAGCACC---AGCACCAAAGACTCGGCGTCCTCCGGC
GACTCCAAGCAGCAGC------ACGGC---CACGGCAAC------AAGAAAAAGAAGAAGAGCACCACCGCTGCTGCTGG
G---------------ACTAAATCTTCAGAGAAGAGGCTGGTAAGCCCGGCGACGTCGTCCAGGTTCCTCCTCAACTCCT
CCCGCCTGCAGTCCGACGACCTCGACGTCCTCGCGCTTTCCCCGCCGCCGCCGCCGTCGTTCATCGACGTGTTCCCCGGC
GGCGAAG------CGAAGCCGCCGTCCTTCATCGACGCGTTCCCC---GGCGACGCCTCGCTCCCTCTTTCCTTCGCCAA
GGAGG---CACCGTCGCCGCTACAGCAAGCAGAGACCTCCTCGTCC------TCCTCCTCTGCTTCGTCGTCGTCGGAGA
TCACGGCCGTCC---AAGAAGAGGAGCAGCAGAAGGCGGTGGTGCTGGCGCGGTCGTCCACGACCACGGAGAGA---AGA
ACGACGCAGGTGGTGGTGCTTCGGGTGTCGCTGCACTGCAAGGGGTGCGCGGGCAAGGTGAAGAAGCACATCGCCAAGAT
GGAGGGCGTGACGTCGTTCGACATCGACATCCCCAGCAAGAAGGTGACGGTGGTCGGTGACGTGACGCCGTTGGGCGTGC
TCACCAGCGTCTCCAAGGTGAAGCCCGCGCAGTTCTGGCCGTCGCCGCCGCGCCCGCCCCGCGCATCCGCCTCCTTCTGA
ACGCGCCAGCGATCTCTGCTCTCTCTGAATCACAGCATGACGATTAGCAGAGCATAGCTACCCATCATGAGTGTTTGTCT
CGCAAATATGGCCAATCCTAACGCTTTGCGCGCGCAACGTGAATCCTCGTCGTTGCTGCTTCATGTGGATGCGAGCACCT
TGCATGTGCCTGGCTCTTTTCCCTCTCTCTTCCTGCACACGCACACATGCATGTCTTACATCAACACATGCATGCCTACT
TTATCTTTCCTCTCTCCTCTAATTCCATCACATTTCATTTTGTCTTGACAATTTAGATGGTTTATATCTTTAAAACCATA
ATTGCGTTTTTGAAACTTTTTACATATTTGAACTCGTGGCGTCAGATCAGTTTTGGATAAAGTTGAAACACATTTTTGTT
TGAAACAGTGAAGAACTTTCTGAATAGTGGGTTTGCACTTTATTAGAAATGTTAAAGAACTTTCCTAGAAATTTTATCCG
AACCAAAGAACTTTGTTAACACCTTGTCTGAACTTTGCCATAAAAATCAGAAGAACTTTATATACACAGTGTGATTTTTA
GTTCATGATGGGTTAAAAAAAAGGAATCTCCAGAATATCAATTTGTATGCCAGATCTTAATTAGCATCCACATAGGTTAG
ACACACAACTAAAAAGAATTGTAGTCTAGTATTGCCGCCCAGAACGTCATCAATGCAGCGCTTGTGACAAAGAATATAAA
GGGCTGTACCATGCATTGCATGGCTGACACAGTGGTGCGCCTCATCGATTGGACACCACGCTTGATGAGCGGCAGCGATT
CGAGTTGTGCGCGCATATAGTTAGGAAAAATCCATGTCCTTTGTCTCACCACGTACGTACGTCAGGCTTTCTGCAGCTCT
ATCTTTCATCCTTTTTTATTCCTTGAAAGAAAAGAAACGGCACCG-------------------------ATGCTACAGT
GACTGTACTGATATACTCTCTCCGTCCCAAAATAAGTGTCTGTACTAAGCTTGAGACACTTATTTTGAGACGGAGGG---
----------AGTAGTATATTTTTACCTTTGCTCTGCTTTCTTGTCTGAATTTCAAAACAAAGCATATA-CTAGTCTAGT
CGGTCATGCACTCAAAATATCGAGATT---------------------------------CGAGAGACAAGAAAGGGGGA
AATTAAAGTTGAGTGGAGAAGAAAGTGTAGAATCAAACTTAG-CCCGGTGGTGCCTGTTTGTCATTGTTTAGTA----AC
ATTTCGATTCTATTCGGGTGGACGACATGGATGGGTCTCACAAAGATGACTGCCAGTATCACATTTTTCTTTTCGATTAT
ACATACATTGTTATTCTCCATCGAGCACTAGCAGCAGCACAAGTGCAAAAGCCAAGATATCCATCCCTCT-AAGTTGATT
GATATCCATCATTAGCCGCCATGTAGCAGTACATCAACAGCAGTGAAAGAGCAATTGGAAGCTTGGACGTCAACATTCTT
TATATGTTACTCTGATCAGGTAAAGAAAACAACTTGTTT-------
>chr3D_899
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GAAGAAGAAGAGAATCATCATTCCTTTCATTTCATTTCATTGT-GCACCACCAACCCAA
CCCAGAGACTC-------------CTCAGAGTAATCGAGCCGGCCATCTTGCTTCG-----TTCCATGGCGTCTCTGCTT
CTCAAGGGCGTGCACAAGCGTCTGGGCCTGCCCACTATCT------CCATCTCCTGCTCCTCCGCCGACGCCACCAACAT
CATCGCCTCCACCGGCACCGGC---GCCGTCGTTGGCAGCAGCGGCCGGGCCATCGACCGCCACTCGCCGCGGCTCCGCG
ACCCACACCGCTCCTCCACCTCCAAGCCGCCCAGACCAAGCACCAG---------CACCAAAGACTCGGTGTCCTCAGAG
GACCCCAAGCAGCAGC------AGCAGCAGCACGGCAGC------AAGAAGAAGAAGAAGAGCACCACGGCTGGTGCTGC
TGCAGA---TGGGAG---AAGGTCTTCGGAGAAGAGGCTGGTCAGCCCGGCCACCTCCTCCAGGTTCCTCCTCAACTCCT
CCCGCCTGCAGTCCGACGACCTCGACGTCCTCGCGCTGCCCCCGCCTCCGCCGCCGTCCTTCATCGACGCGTTGCCCGTC
GGCGAAGGGAAGCCGAAGCCGCCGTCCTTCATCGACGCGTTCCCG---GCCGACGCCTCCCTGCCGGTTCCCTCTGCCAA
GGACGCGCCGCCGTCGACTGTGCACCAAGCAGAGTCCTCGTCGTCAGGGACGTCCTCCTCTGCTTCGTCGTCGTCGGAGA
TCACGGCCGTCC---AAGACCCGGAGCAGCACAAGGCGGCGGCGCTGGTGCGGTCGTCCTCG---ACGGCGGCGGCGAGG
ACGACGCAGGTGGTGGTGCTGCGCGTGTCGCTGCACTGCAAGGGGTGCGCGGGCAAGGTGAAGAAGCACATCGCCAAGAT
GGAGGGGGTGACGTCGTTCGACATCGACATCCCGAGCAAGAAGGTGACGGTGGTCGGCGACGTGACGCCGCTGGGGGTGC
TCACCAGCGTCTCCAAGGTGAAGCCCGCGCAGTTCTGGCCGTCGCAGCCGTGCCCCCCGCATGCCTCCGCTTCCTTCTGA
AC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr3B_901
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AGAAGAAGAGAATCATCATTCATTTCATCTCATTGTGCACCAGCACCACCAACCCAA
CCCAGAGA-------------------------------CCGGCCATCTTGCTTCG-----TTCCATGGCGTCTCTGCTT
CTCAAGGGCGTGCACAAGCGGCTGGGCCTGCCCACCATCT------CCATCTCCTGCACCTCCGCCGACGCCACCAACAT
CATCGCCTCCACTGG---CACCGGCGCCGTCGTCGGCAGCAGCGGCCGGGCCATCGACCGCCACTCGCCGCGCCTCCGCG
ACCCGCACCGCTCCTCCGCCTCCAAGCCGCCCAGGCCAAGCACCAGTAGC---ACCACCAAAGACTCGGCGTCCTCCGAC
GACCCCAAGCAGCAGCAGCAGCACGGC---CACGGCAGC------AAGAAGAAGAAGAAGAGCACCACCGCTGCTGCTGC
CGGTATCAGTGGCAG---TAGATCTTCAGAGAAGAGGCTGGTGAGCCCGGCCACCTCCTCCAGGTTCCTCCTCAACTCCT
CCCGCCTGCAGTCCGACGACCTCGACGTCCTCGCGCTGCCGCCGCCTCCGCCGCCGTCCTTCATCGACGCGTTCCCTGGT
GGCGAAGGGAAGCCGAACCCGCCGTCCTTCATCGACGCGTTCCCG---GTCGACGGCTCCCTGCCGGTTCCCTTTGTCAA
GGAGGCGCCGCCGTCGACTGGGCACCAAGCAGAGTCTTCGTCGTCGGGGACGTCCTCCTCTGCTTCGTCGTCGTCGGAGA
TCACGGCCGTCC---AAGAAGAGGAGCAGCACAAGCCGGCGGCGCTGGCGCGGTCGTCCTCGACGACGGCGGCGGCGAGG
ACGACGCAGGTGGTTGTGCTTCGGGTGTCGCTGCACTGCAAGGGGTGCGCGGGCAAGGTGAAGAAGCACCTCGCCAAGAT
GGAGGGCGTGACGTCGTTCGACATCGACATCCCGAGCAAGAAGGTGACGGTGGTCGGCGACGTGACGCCGCTGGGGGTGC
TCACCAGCGTCTCCAAGGTCAAGCCCGCCCAGTTCTGGCCGTCGACGCCGTGCCCCCCGCGGGCCTCAGCTTCCTTCTGA
AC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr3A_908
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GAGAATCA---------TCATTTCATTTCATTGT-GCACCACCAACCCAA
CCCAGACCCGGAG------AGAGACTCAGAGTAATCGGGCCGGCCATCTTGCTTCG-----TTCCATGGCGTCTCTGCTT
CTCAAGGGCGTGCACAAGCGTCTGGGCCTGCCCTCCATCT------CCATCTCCTGCTCCTCCGCCGACGCCACCAACAT
CATCGCCTCCACCGGCACCGGC---GCCATCGTCGGCAGCAGCGGCCGGGCCATCGACCGCCACTCGCCGCGGCTCCGCG
ACCCACACCGCTCCTCCACCTCCAAGCCGCCAAGGCCAAGCACCAGTAGC---ACCACCAAAGACTCGGCGCTCTCAGAG
GACTCCCAGCACCAGCT---GCACGGC---CACGGCACC------AAGAAGAAGAAGAAGAGCACCACTGCTGGTGCTGC
TGGTATCAGTGGCGGTACTAGATCTTCGGAGAAGAGGCTGGTCAGCCCGGCCACCTCCTCCAGGTTCCTCCTCAACTCCT
CCCGGCTGCAGTCCGACGACCTCGACGTCCTCGCGTTGCCCCCGCCTCCGCCGCCGTCCTTCATCGACGCGTTCCCCGGC
GGCGAAGGGAAGCCTCCGCCGCCGTCCTTCATCGACGCGTTCCCG---GCCGACGCCTCCCTGCCGGCTCCCTTCGCCAA
GGACGCGCCGCCGTCGACTGTGCACCAAGCAGAGTCTTCGTCGTCAGGGACGTCCTCCTCTGCTTCGTCGTCATCAGAGA
TCACGGCCGTCC---AAGACACGGAGCAGCACAAGGCGGCGGCGCTGGCGCGGTCGTCCTCGACGACGGCGGCAGCGAGG
ACGACGCAGGTGGTGGTGCTGCGCGTGTCGCTGCACTGCAAGGGCTGCGCGGGCAAGGTGAAGAAGCACATCGCCAAGAT
GGAGGGCGTGACGTCGTTCGACATCGACATCCCGAGCAAGAAGGTGACGGTGGCGGGCGACGTGACGCCGCTGGGCGTGC
TCACCAGCGTCTCCAAGGTCAAGCCCGCGCAGTTCTGGCCGTCGCAGCCGTGCCCGCCCCGCGCCTCCCCTTCCTTCTGA
AATC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-------SS---S---S-S-----------SSSS------------------------------S-
-----S----------S--S-----------------------------------S-----SS-----------------
-------S---------------------------------S-SS---------------------------S-SS----
--------SSSS--------S-----------------------------------------------------------
---S---S----------S-------------------------------------------------------------
-----------S----------------------------SSSSSS----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------SSS---------------------------
--------------------------S--------------------S--S-----------------------------
--------------------------------------------------------------------------------
-------------------------------------S--------S---------------------------------
----------------------------------------------------------------------S---------
---------------------------------------------------------------------------S----
-----S--------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
----SS--S-S------SSSS--------S----S---S-S----------S-----S----------S-----S----S
SS--SSSSSS-SSS-SSS-SSSSS-SS--SSSS---S-S-SSSSS--S-SSSS-S-SS-S--SSS--SS---S--SS-SS
--SS----SSSSS-S-SSS-SS-S--SS---------------------------------S---SS-------SS-SS-
--S-SSS--SSS-S----S--S-SS-SSS-SSSSSSS-S--S-SS-SSSSSSSS-SSS--SSSS-SS-SSSSSSSSS-S-
-SSSSSSS------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------SSSSSS--S---SSSS--SSSSSSSSSSSSSSSSSS---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S---------------S--------
-------S-----------S-------------------SSS------------S-SS-SSSS-SSSS--SSS-------
----------------S-S-------S--S----SSS-SSS--SS-SSS-S-S--SS-S-SSSS-SS-SSS--SSSSSSS
SSSSSSSSSS----S-S-S-----SS-S-----------------S--------S-------------------------
------S--------------S--------------------------------------S---------------S---
------------------------------------------S--S----------------------------SS----
----------------------------------S---------------------------------------------
----------------------S----------------S--------------------------S-------------
-SS-------------------------------------------------------------S---------------
--S--S-------------------------S-----------S--
>forward_199
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GCACTCTCTGCTGGTCTTGT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>reverse_1251
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AGTAGCACCAAAGACTCGGC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>forward_550
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ACCTTCCCTGTAGTCCTCCC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>reverse_2111
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TCGGCATCCTTGTATCTGGC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
