>input_sequence_65460
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-------------------------ATGGATCCTAATGGCTCCTACCCCAACAAAGTTACATCTGGTGAGAATGATGCCT
ACATTTCCCCCTTGCATGAAGCATTGAGAGGCACGAGAGCCATGCCAGTGTTAAATGATATTTTGGCCTTTGAGTCACTA
CCATCAGATTCACCTTCCATGGCGAACTCCTCATCTGCACCCGATGCACCACCTGAACCTACCATGATGCTAGTCAATGA
TAGTTCCATGATGCCACACCATGAGAATGTAGGTCTAGCACCACTCCCACCACAATTGTCTGATACAATTATTAATCCTT
TATCCATGGTTAATACCATAGTGTCCCAACCCAACAATGAGGAAATCCATCAAGATGAACATGAAATGTTCAGGCATGAA
GACTTCCTTTCAAACCCTTTGTGGAATTACGCTGACTCCTATCATCATACACATAC-CTCGTCCATGGAGTCTCCATCAT
TCACATCCTTACTCCAAACAGATCCAAATTCTATTGTTCATACCCACCTTAACACTAATGGAGCAATGGAGGATGGTTCA
ATCTATGACATGCCCGCCATACATGTCTCTGAGGTAAACTCACTACCATATG--GATTTCATTGTTCTCCTGAAAATATT
GACCCATTTACACCGAATACTATATTGCAACAACAGAACATACAAGATGGAAGGCTACTATATGATGCTTCTTATGGTGT
ACCTGCCCCTATTTCTCCATTCATGGCAACCTCACATGTACCAAGAGAATATAACACCCCTCTAGTTGGTCCAAATGGCA
TTTCTGATAGTGCTATTTTGCATGATTCTACATCCTTGGGTAATTACACATGCAAGATTTGCGGTCGCAAATTCAACACA
TCTCAAGCCTACGGTGGTCACATGAGTTCCCATGCCAAAGAAAGGAAGAAACACCTACAAAGTTGA--------------
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------------------------------------------------
>chr2A_1_TraesCS2A01G319400
ATATCATATTGGCACTTTTAATTATTTCCTATTAGTTGATTAACCATTG-TTTTTATTAATAACTGATGCTCTAACTAAT
AGTTAATTATCTGTTTAA--ATATGTTAGTATTTGAATTTGAATTCACACAAGTTGTACATCTCTCCCTTCAAAAGGAAA
TCTATCACACTTGAGTACGCATTGAAATAAGTGTGCACAGTCTACAGGGCGTGCAATTTGTTCAAAGAGGA--GGGAGAG
AAGACTTGACAGAATA----------------------------------------------------------------
-------------------------------------ATGGAATGGAAAAGTGGGTTGTAATTATTGCACAGATCACGAA
GCAGAAATAGACGACATAGATAGCCTCTCCGAGGGTAT-----------------------TTCTTGATGGCATTACTAT
TTCATTAGAAATAGTAGTTTGGACACATGGTGCAACCATAAGGAAGTTAATATACTAACTTTCAAAGTTGAGATCATAAA
CTAACATTACTTGTTTAGGAAGACGTGTGCTATCTTGTATCATCATAGATGATGCTTTTTTGTGTCCAACAAAAGAAGGT
GTGTTGGAAAATTATATTAAAACTGAT-GCAAAATCAAATATAGAAATAAAGATCCTAGAAGATCTCTTTAATTATTAGA
CACATGTTTATCTCATATCTCATAGATATTGTATGAATATCAGTGAATAAATTCCAGATCTTCTTGATAATGTCATAATT
-AATATTAGATGACGCCATTAACGCGAAATTGTATTAACACATAGGGCAAGATCAAATTCCACATTGAGAGATCCTAGAA
TATCTCGTTAATTATTAGACAAATTTATATCTGATATCTCTTAGACGTTCCATAAAT-ACAATTATTAAAATCTAGATAT
TCTAGATTTTGTAATCATTCAATATTACATGAGGCCATGCATGGCTATAGTTCTGTAAGAACCTTATATATAGATATCTA
CCTATGCAATAATCCTCATAAGCTTCAAGCACTATCATAGCATAAGCGTCTCTCTTCTCCATAGCTTC------------
-AAATTGTCGATCTTGCTAGTAGTCATGGATCCTAATGGCTCCTACCCCAACAAAGTTACATCTGGTGAGAATGATGCCT
ACATTTCCCCCTTGCATGAAGCATTGAGAGGCACGAGAGCCATGCCAGTGTTAAATGATATTTTGGCCTTTGAGTCACTA
CCATCAGATTCACCTTCCATGGCGAACTCCTCATCTGCACCCGATGCACCACCTGAACCTACCATGATGCTAGTCAATGA
TAGTTCCATGATGCCACACCATGAGAATGTAGGTCTAGCACCACTCCCACCACAATTGTCTGATACAATTATTAATCCTT
TATCCATGGTTAATACCATAGTGTCCCAACCCAACAATGAGGAAATCCATCAAGATGAACATGAAATGTTCAGGCATGAA
GACTTCCTTTCAAACCCTTTGTGGAATTACGCTGACTCCTATCATCATACACATAC-CTCGTCCATGGAGTCTCCATCAT
TCACATCCTTACTCCAAACAGATCCAAATTCTATTGTTCATACCCACCTTAACACTAATGGAGCAATGGAGGATGGTTCA
ATCTATGACATGCCCGCCATACATGTCTCTGAGGTAAACTCACTACCATATG--GATTTCATTGTTCTCCTGAAAATATT
GACCCATTTACACCGAATACTATATTGCAACAACAGAACATACAAGATGGAAGGCTACTATATGATGCTTCTTATGGTGT
ACCTGCCCCTATTTCTCCATTCATGGCAACCTCACATGTACCAAGAGAATATAACACCCCTCTAGTTGGTCCAAATGGCA
TTTCTGATAGTGCTATTTTGCATGATTCTACATCCTTGGGTAATTACACATGCAAGATTTGCGGTCGCAAATTCAACACA
TCTCAAGCCTACGGTGGTCACATGAGTTCCCATGCCAAAGAAAGGAAGAAACACCTACAAAGTTGATCTTCCCATATGTA
CTTGGACATCCCATGATTACCATTCTCGGGACAAAT-ATTTCTAC--TAGCACCAAAATGGTTGAAGACCGAGAGCTTCT
AGCTCAAGTGGAGAAATTTTAATAGATTTTATTTGTTTTTGGAAACAAAAATATCAATGGAGTAACATAAGAGTGAGAAT
ATGTTGTGAGGGTGTGAAACAATTAATAGAACTATCTTTGTTTGAATG--GTATGTGTTGTTGTTTCCATGTTTAACTAA
T--AGATTCATCTTTAATGGTCGTGTACCATGTTATTCTCTTCCATATTAATATATGAAGGAACCAAGATTTTTAATGAA
GATTTTCTAGAGCTAGGTAAGATGTATGTTTCCTAACATTTTTCATAAACTTCTTCAAAGTAGAATAATATTTTCCAAAT
AATGTGCCATATAAAATGCTAAACCATCTAAACCATTTTGCTTAACGAGTAGTATCATCTAGGGGTGGGCATAAAAACCG
ACGAACTGA--AAACCGAACAAACTAAATTTTCGGTTTTTTTACTGTTACAG-AAAAATTAGTTTTCCTGTCCACTAACC
GAACAAAATTCGGTAGGTTCGGTTTGCATCTCGGTTAACCAAACAAAAACAAAACGAACGTGACTGATTGTACTGTACAG
CACAAAAGCAGGCGTAGGCGTGCAACGTTGTCTCCCAGGAGTCACACGCCCAACCGCCCACAATCGCCCATGAATGCATC
ATGCACGCATCTCACATAATGTGGGCCTGCCTGACCATTCAAGTGCCTACAAGGATAAGGCCTACCTGACGTGGGCTTTT
T----GTGAACGGTGTGCCCGCAC--------ATGCGAATAGCTGACCACACCATTTCGCTGCTCTAGTCCCACCTCGCC
CGACTGAGGAGATTAGCCAGATTTTTTGCCTATATAAGATGGTGCAGCTAGTGCAATCGGAGCATAGATACTTGAAGCGT
GGTCATTCCGTATAAAACCAAAAACCGAACCGAATATACGGTTAACCA
>chr2D_1
ATATCATATTGGCACTTTTAGTTATTTCCTAATAGTTGATTAAGCATTG-TTTTTATTAATAACTGATGCACTAACTAGT
AGTTAATTAGCTGTTTAA--ATATGCCAGTATTTGAATTTGAATTCACACAAGTTGTATGGCTTCCCCTTCAAAAGGAAA
TCTACCACACTTGAGTATGCATTGAAACAAGTGTGCACAGTCTACAGGGCGTGCAATTTGTTCAAAGAGGAGAGAGAGAG
AAGATTTGACACAATA----------------------------------------------------------------
-------------------------------------ATGTAATGGAAAAGTGGCTTGTAATTATTGCACAGATCACGAA
GCAGAAATAGACGACATAGATAGCCTCTCTGAGGGTAC-----------------------TTCTTGATGGCATAAATAT
TTCATTAACAATAGTAGTTTGGAGCCATGGTGCA-CCATAAGGAAGTTAATATACTAACTTTCAAAGTTGAGATCATAAA
CTAG--TCACTTGTTTAGGAAGACGCGTGCTATCTTGTATCACCATAAACGATGATTTTTTGT--CCAACAAAAGAAAGT
GTGTTGGAAAGTTATATTGAAACTGAT-GCAAGATCAAATTTAGAAATAAAGATCCTAGAAGATCTCTTTAATTATTAGA
CAAATTGTTATCTCATATCTCATAGATATTGTATGTATATCAGTGAATAAATTCCAGATCTTCCTGATAATGTCATAATT
TAATATTAGATGAGGCCATTAATGTGAAGTTCTATTAAAACATGTGGCAAGATTGAATTCCTCATTCAGAGATCCTAGAA
TATCTCGTTAATTATTAGACAAATTTATATCTGATATCTCCTAGACGTTGTATAAATAACAATGATTAAAATCCAGATAT
TCTAGATTATGTAATCATTCAATATTACATGATGCCATGCATGGCCATAGTTTTGTAAGAACCTTATATATAC--ATCTA
CCTATGCAATAATCCTCATAAGCTTCAAGCACTATCATAGCATAAGCGTCTCTCTTCTCCATAGCTTCTTCTG-A-----
-AAATTGTTGATCTTGCCAGTAGTCATGGATCCTAATGGCTCCTACCCTAACAAAGTTAGATCTAGTGAAAGTGATGCCT
ACATTTCTCCCTTGCATGAAGTATTGAGAGGCACGACAGCCATGCCAGTGTTAAATGATATTTTGGCCTTTGAGTCACTA
CCATCAGATTCACCTTCCATGGTGAACTCCTCACTTGCACCCAATGCACCACTTGAACCTACCATGATGTTAGTCAATGA
TAGTTCCATGATGCCACACCAAGAGAATGTAGGCCTAGCACCACTACCACCACAATTGTCTGATACAATTATTAATCCTC
TATCCATGGTTAATACCATAGTGCCCCAGCCCAACAATGAGGAAATCCATCAAGATGAACATGAAATGTTCAAGCATGAA
GATTTCCTTTCAAACCCTTTGTGGAATTATGCAGACTCCTATCATCATACCTATAC-CTCGCCCATGGAGTCTCCATCAT
TCACATCCTTACTCCAAACAGATCCAAATTCTATTGTTCATACCCACCTTAACACTAATGGAGCAATGGAGGATGGTTCA
ATCTCCGATATGCCCACCATGCATGTCTCTGAGGTAAACTCACTACCATATG--GATTTTGTTGTTCTCCTGAAAATATT
GACCCATTTACACCTAATACTATATTGCAACAACAGAACATACAAAATGGAAGGCTACTATATGACTCTTCTTATGGTGT
ACCTGCCCCTATTTCTCCATTCATGACAACCTCGCATGTACCAAGAGAAGATAAGACCCCTCTAGTTGGTCCAAATGGCA
TTTTTGGTAGTGGTATTTTGCATGGTTCTACATCCTTGGGTAATTACACATGCAAGATTTGCGGTCGCAAATTCATCACA
TCTCAAGCCTACGGTGGTCACATGAGTTCCCATGCCAAAGAAAGGAAGAAACAACTACAAAGTTGATCTTCCCAT--GGA
CTTGGACATCCCATGATTACCATTCTCGGGACAAAT-ATTTCTAC--TAGCGCCAAAATGGTTGAAGACCGAGAGGTTCT
GGCTCAAGTGTAGAAATTTTAATAGATTTTAT---TTTTTGGAAACAAAAGTATCAATGGAGTAACATAAGAGTGAGAAT
ATGTTGTGAGGGTGTGAAACAAT----AGAACCATATTTGTTTAAATG--GTATGTGTTGTTGTTTCCATGTTTAACTAA
T--AGATTCATCTTTAATGGTTGTGGACCTTGTTATTCTCTTCCATATTAATATATGAAGGAACCGAGATTTTTCATGAA
GATTTTCTAGAGCTAGGCAAGATGTA------------------------------------------------------
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------------------------------------------------
>chr2B_1
ATATCATATTGGCACTTTTAATTATTTCCTAATAGTTGATTAACCATTGTTTTTTATTAATAACTTATGTGATAACTAAT
AGTTAATTAGTTTTTAAATTATGTGTTAGTATTTGAATTTAAATTCACGCAAGTTGTATGGATCTCCCTTCAAAAGGAAA
TCTACCACACTTGAGTATGCATTGAAACAAGTGTGCACAGTCTGTAGGGTGTGCCCTTTGT------------GAGAGAG
AAGATTACACATGTTTTAATAGAATTTCACATTAATGGACTCATCTAATATTAAATTATGACATTATCAGGAAGACCTGG
AATTTATTCATTGATATTCATACAATATCTATGAGATATGAGATACAAATTTGTCTCATAATTAAAGAGATCTTCTAGGA
TCTTTATATCTAAATTTGTTCTTGCCATTAGTTTTCATATAACTTTCCAACGCAGTTTCTTTTGTTGAACGCAAAAAATC
ATCATTTATGATGATACAAGAGAGCACACGTCTTCCTAAACAA--------------------------GAGATCATAAA
CTAACATCACTTGTTTAGGAACATGTGTGCTCTCTTGTATCATCATAAATGATGATTTTTTGTGTTCAACAAAACAAACT
ACGTTGGAAAGTTATATGAAAACTAATGGCAAGATCAAATTTAGATATAAATATCCTAGAAGATCTCTTTAATTATGAGA
CAAATTGGTATCTAATATCTCATAGATATTGTATGAATATCAATCAATAAATTCCAGGTCTTCCTGATAATGTCATAATT
TAATATTAGATGAGTCTATTAATGTGAAATTCTGTTAAAACATGTGTAAAGATCGAATTTCTCATTGAGAGATCCTAGAA
TATCTCGTTAATTATTATACAAATTTATATCGGATATCTCCTACACATTGTATAAATAACAATGATTAATATCTAGATAT
TCTAGATTATGTAATCATTCAATATTACATGGGGCCATGCATGGATCTACTTATGTAAGATCACTATAAATATATTG--A
CCTATGCAATAATCCTCATAAGCTTCAAGCACTATCATAGCATAAGCATCTCTCTTCTCCATAGCTTCTTCTACA-----
-AAAAATTCGATCTTGCTAGTAGTTATGGATCCTAATGGCTCCTACCCTAACAAAGTTAGATCTAGCAAAAGTGATGCCT
ACATTTCTCCCTTGCATGAAGCATTGAGAGGAACAAGAGCCATGCCAGTGTTAAATGATATTTTGGCCCTTGAGTCACTA
CCATCAGATTCACCTTCCATGGCAAACTCCTCACTTGCATCCGATGCACCACCTGAACCTACCATGATGCCATTCAATGC
TAGTTACATGATGCCACACCAAGAGAATGTAGGCCTAGCACCACTACCACCACAATTGTCTAATACAATTATTAATCCTT
TATCCATGGTTAATACAATAGTGTCCCAGCCCAACAATGAGGAAATCCATCAAGATGAACATGAAATGTTCAGGTATGAA
GACTTCCTTTCAAACCCTTTGTGGAATTACGCCGACTCCTATCATCATACCAATAC-CACATCCATGGAGTCTCCATCTT
TCACATCCTTACTCCAAACATACCCAAATTCTATTGTTAATACCCACCTTAATACTACTGGAGCATTGGAGGATGGTTCA
ATATCTAACATGCCTACCATGCATGTCTCCGAGGTAAACTCGCTAACATATG--GATTTCTTTACTCTCCTAAAAATATT
TACCCATTTACACCGAATAATATATTGCAACAACAGAATATACAAAATGGAAGGCTACTATATGACGCTTCTTATGGTGT
ACCTACCCCTATTTCTCCATCCATGACAACCTCCTATGTACCAAGAGAAGATAACACCCCTCTAGTTGGTCCAAATGGCA
TTTTTGGTGGTGCTATTTTGCATGATTCTACATCCTTGGGTAATTACACATGCAAGATTTGTGGTCGCAAATTCGTCACA
TCTCAAGCCTACGGTGGTCACATGAGTTCCCATGCCAAAGAAAGGAAGAAACACCTACAAATTTGATCTCCC---ATGTA
CTTGGACATCCCATGGTTACCATTCTCGGGACAAAT-AATTCTAC--TAGCGCCAAAGTGGTTGAAGACCGAGAGTTTCT
AGCTCAAGTGTAGAAATTTTAATAGATTT-ACTTGTTTTTGTATACAAAAATATCAATGGAG-----------------T
ATGTTGTGAGGGTGTGAAACAAT----AGAACCGTCTTTGTTTGAGTG--GTATGTGTTGTTGTTTCCATGTTTAACTAA
T--AGAGTCATATTTAATGGTTGTGTACCATGTTATTATCTTCCATATTAATATATGAAGGATCAAAGATTTTTAATGAA
GATTTTCTAGAGCTAGTTAAGATGTTTG-TTTCTACCATTTTTCATAAATTTCTTCGAAGTACAATAACATTTTCCAAAT
AATGTGCCATATAAAGTGCAAAACCATCTAAACCATTTTATTTAACGAGTAGTATCATC---------------------
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>chr3D_739
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---------------------------------------------------------------------AGATCCTAGAA
GATCTCATTAATTATTAGAAATTTTAATA--TCATATCTCCTATATATTGTATTAATAGCAATTATTAAAATCCAAATAT
TCTTGTTAATGAGATAATTAAATAGTACACGAGTCCATGCACGTCTATAGTTTTGTAAGATCCTTATAAATATCAC----
CTTATGTAATACCCCACATAAGCATCAAAGGC-ATCCTATCATATGCATCTCTATTCTCCATAACATCTACTGCAATCTG
CAAATTGTTGATATTGCTAGTAGCTATGGATCCTAATGGCTCCTATCCTAAC----------------------------
--ATTTCCCCCTTGCATGAAGCATTGAGAGGCACGACAACCATGCCGATATTGAATGATTTCGTAGACCTTGAATCCCCA
TCATCATATTCACCTTCGATAGGAAATTCCTCAACAAACATCCATGCACCACAAGAAGGTACTGTGATGTCGGTCAATGA
TAAATCCATGATTCCATACCAATCTAGTGCAGAACTCGCACCACTACCCCCACAACTGGGTGATACAATCCCTATTCCTT
TATCCTC---------------------------------------------GAACGAAAAAGGAATGTTCTCGCATGAA
GACTTCCTCACAAATCCTTTTTGGAATGACTTCAACTCATCACATCAGATGCAG-AATTTGTCCACGGAGGCTTCACCAT
TCACACCCTTACTCCAAACAGAACCAAATTTAATTGTTCATTCCCAACTTAACACTAATGCGGTGGTGGATGATGGTTCA
CTCTTTAAGATGGCCACGAGGGATGTCTCCGAGGTAAGCTCACTACCGTCTA--GGTTTCTTTGTTCTTCTCAAAAGATT
CACCCCTTCACACCAAGTACTATGCAGAAGCAATTGAAGATACAAGATGGAAGATTATCAAATGCTGATCCATATGGTGT
ACCTGCCCCTGCTTCTCCAGCCATGCAATCGTCACATATTCAAAGAGAAGATAAGATCCTTCTAGTTGGTCCAAATGGCA
TTTCTGATAGTGCTATTATGCATGATTCGACAACCTCACGTAAATACACATGCAAGATTTGCAATGCCACATTCAACACA
TCTCAAGCGTATGGTGGTCACATGAGTTCGCATAGCAAAGCAAGGATGAAAAGCCTACAAAGTTGATCTTCCCAT--GTA
GCTTGACATCCCATGATTGATACTTGTGGGACCAATATTTT-TCC--TAAGCACACAATGGATGAAGGCACGGTGGTTTC
ATCGCAAGTGGAGAAAATTTATAAGAGGTTATTTATATTTGGAAACAAAATTATCAATAGAATAGCATAAGAGTGAAGAT
ATGTTATGTGGGTGCGAAACTAT----TGAAAATTATTTT-CTTGGCTATGTTTGTTTTGCTATTTCCCTATGTAAACAA
C--ATAGTCATCTTTGATGGTTGTGTAC----------------------------------------------------
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>chr3B_1053
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----------------------------------------------CCTAAC----------------------------
--ATTTCCCCCTTGCATGAAGCATTGAGAGGCACGACCGCCATGCCGATATTGAATGATTTCATAGACCTTGAATCCCCA
TCATCATATTCACCTTCAATAGGAAATTCCTCAACAAACATCCATGCACCACAAGAAGGTACCGTGCTGTCGGTCAATGA
TAGTTCCATGATTCCATACCAATCTAATGCAGAACTCGCACCACTACCCCCATAGCTGGGTGATACAATCCCTAGTCCTT
TATCATT---------------------------------------------GGATGAAAAAGGAACGTTCTCGCATGAA
GGCTTCCTCACAAATCCTTTTTGGAATGACTTCAACTCATCACATCAGATGCAG-AATTTGTCAACGGAGGCTTCACCAT
TCACACCCTTACTTCAAACAGAACCAAATTCAATTGTTCATTCCCAACTTAACACTAATGGAGTGTTGGATGATGGTTCA
CTCTTTAAGATGGTCACGAGGGATGTCTCCGAGGTAAGCTCACTACCATCTA--GGTTTCTTTGTTCTTCTCAAAAGATT
CACCCCTTCACATCAAGTACTATGCAGAAGCAACTGAAGATACAAGATGGAAGATTATCAAATGCTAATCCATATGGTGT
AGCTGCCCCTACTTCTCCAGCCATGCAATCCTCACATATTCAAAGAGAAGATAAGATCCTTCTAGTTGGTCCAAATGGCA
TTTCTGATAGTGCTATTATGCATGATTCTATAACCTCACGTAAATACACATGCAAGATTTGCAATGCCACATTCAACACA
TCTCAAGCATATGGTGGTCACATGAGTTCGCATAGCAAAGCAAGGATGAAAAGCCTACAAAGTTGATCTTCCCAT--GTA
GCTTGACATCCCATGATTGATACTTGTGGGACCAATATTTT-TCC--TAAGAACACAATGGATGAAGGCACGATGGTTTC
ATCGCAAGTGGAGAAACTTTATAAGAGGTTATTTATATTTGGA---AAAAATATCAATAGAATAGCATAAGAGTGAAGAT
ATGTTATGTGGGTGCGAAACTAT----CAAAAATTATTTT-CGTGGCTATGTTTGTGTTGCTATTTCCCTATGTAAACAA
C--AGAGTCATCTTTGATGGTTGTGTAC----------------------------------------------------
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>chr3A_1053
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----------------------------------------------CCTAAC----------------------------
--ATTTCCCCCTTGCATGAAGCATTGAGAGGCACGACAGCCATGCCGGTATTGAATGATTTCGTAGACCTTGAATCCCCA
TCATCATATTCACCTTCGATAGGAAATTCCTCAACAAAAATGCATGCACCACAAGAAGGTACCGTGATGCCGGTCAATGA
TAGTTCCATGATTCCATACCAATCTAGTGCAGAACTCGCACCACTACCCCCACAACTGGGTGATACAATCCCTATTCCTT
TATCCTC---------------------------------------------AGACAAAAAAGGAATGTTCTCGCATGAA
GGCTTCCTCACAAATCCTTTTTGGAATGAATTCAACTCGTCACATCAGATGCAG-AATTTGTCCACGGAGGCTTCATCAT
TCACACCCTTACTCCAAACAGAGCCAAATTCAATTGTTCATTCCCATCTTTACACTAATGGAGTGTTGGATGATGGTTCA
CTCTTTAAGATGGCCACGAGGGATGTTTCCGAGGTAAGCTCACTACCGTCTA--GGTTTCTTTGCTCTTCTCAAAAGATT
CACCCCTTCACACCAAGTACTATGCAGAAGCAGATGAAGATACAAGATGAAAGATTATCAAATGCTGATCCATATGGTGT
ACCTGCCCCTGCTTCTCCTACCATGCAATCCTCACATATTCAAAGAGAAGATAAGATCCTTCTAGTTGGTCCAAATGGCA
TTTCTGATAGTGCTATTATGCATGATTCTACAACCCCACGTAAATACACATGCAAGATTTGCAATGCCACATTCAACACA
TCTCAAGCATATGGTGGTCACATGAGTTCGCATAGCAAAGCAAGGATGAAAAGCCTACAAGGTTGATCTTCCCAT--GTT
GCTTGACATCCCATGCTTGATACTTGTGGGACCAAT-TTTT-TCC--TAAGCACACAATGGATGAAGGCACGGTGGTTTC
ACCGCAAGTGGAGAAAATTTATAAGAGGTTATTTATATTTGGAAACAAAATTATCAATAGAGTAGCATAAGAGTGAAGAT
ATGTTATGTGGGTGCGAAACTAT----TGACAATTATTTT-CTTGGCTATGTTTGTGTTGCTATTTCCCTATGTAAACAA
C--AG--TTATCTTTGATGGTTGTGTAC----------------------------------------------------
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------------------------------------------------
>chr3A_1053
--------------------------------------------------------------------------------
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----------------------------------------------CCTAAC----------------------------
--ATTTCCCCCTTGCATGAAGCATTGAGAGGCACAACAGCCATGCCAGTATTGAATGATTTCGTAGACCTTGAATCCCCA
TCATCATATTCACCTTCAATAGGAAATTCCTCAACAAACATGCATGCACCACAAGAAGGTACCGTGATGTCGGTCAATGA
TAGTTCCATGATTCCATACCAATCTAGTGCATAACTCGCACCACTACCCCCACAACTGGGTGATACAATCCCTATTCCTT
TATCCTC---------------------------------------------GGACGAAAAAGGAATGTTCTCGCATGAA
GGCTTCCTCACAAATCCTCTTTGGAATGACTTCAACTCGTCACATCGGATGCAG-AATTTGTCCACGGAGGCTTCATCAT
TCACATCCTTACTCCAAACAGAGCCAAAATCAATTGTTCATTCCCAACTTAACACCAATGGAGTGTTTCATGATGGTTCA
CTCTTTAAGATGGCCATGAGGGATGTTTCTGAGGTAAGCTCACTACCGTCTA--GGTTTCTTTGTTCTTCTCAAAAGATT
CACCCCTTCACACCAAGTACTATGCAGAAGCAGCTGAAGATACAAGATGAAAGATTATCAAATGTTTATCCATATGGTGT
ACCTGCCCCTGCATCTCCTGCCATGCAATCCTCACATATTCAAAGAGAAGATAAAATCCTTCTAGTTGGCCCAAATGGAA
TTTCTGATAGTGCTATTATGCATGATTCTACAACCCCATGTAAATACACATGCAAGATTTGCAATGCCACATTCAACACA
TCTCAATCATATGGTGGTCACATGAGTTCGCATAGCAAAGCAAGGATGAAAAGCCGACAAAGTTGATCTTCCCAT--GTA
GCTTGGCATCCCATGATTGATACTTGTGGGACCAAT-ATTT-TCC--TAAGAACACAATGGATGATGGCACGATGGTTTC
ACCACAAGCGGAGAAAAATTATAAGAGGTTATTTATATTTGGAAACAAAATTATCAATAGAGTAGCGTAAGAGTGCAGAT
ATGTCATGTGGGTGCGAAACTAT----TGAAAATTATTTTTCTCGGCTATGTTTGTGTTGCTATTTCCCTATGTAAACAA
TAGAG--TCATCTTTGATGGTTGTGTA-----------------------------------------------------
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------------------------------------------------
>chr3A_1053
--------------------------------------------------------------------------------
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----------------------------------------------CCTAAC----------------------------
--ATTTCCCCCTTGCATGAAGCATTGAGAGGCACGACAGCCATGCCGGTATTGAATGATTTCGTAGACCTTGAATCCCCA
TCATCATATTCACCTTCGATAGGAAATTCCTCAACAAACATGCATGCACCACAAGAAGGTACCGTGATGTCGGTCAATGA
TAGTTCCATGATTCCGTACCAATCTAGTGCAGAACTCGCACCACTACGCCCACAGCTGGGTGATACAATCCCTATTCCTT
TATCCTC---------------------------------------------AGACGAAAAAGGAATGTTCTCGCATGAA
GGCTTCCTCACAAATCCTTTTTGGAATGACTTCAACTCATCACATCAGATGCAAAAATTTGTCCACGGAGGCTTCATCAT
TCACACCCTTACTCCAAACAGAGCCAAATTCAATTGTTCATTCCCAACTTAACACTAATGGAGTGTTGGATGATGGTTCA
CTCTTTAAGATGGCCACGAGGGATGTTTCCGAGGTAAGCTCACTACCGTCTA--GGTTTCTTTGTTCTTCTCAAAAGATT
CACCCCTTCACACCAAGTACTATGGAGAAGCAGCTGAAGATACAAGATGAAAGATTATCAAATGCTGACCCATATGGTGT
ACCTGCCCCTGCTTCTCCTGCCATGCACTCCTCACATATTCTAAGAGAAG-TAAGATCCTTCTAGTTGGTCCAAATGGCA
TTTCTGATAGTGTTATTATGCATGATTCTTCAACCCCACATAAATATACATGAAAGATTTGCAATGCCACATTCAACACA
TCTCAAGCATATGGTGGTCACATGAGTTCGCATAGCAAAGCAAGGATGAAAAACCTACAAAGTTGATCTTCCCAT--GTA
GATTGACATCCCATGCTTGATACTTGTGGGACCAAT--TTT-TCC--TAAGCACACAATGGATGAAGGCACGGTGGTTTC
ACCGCAAGTGGAGAAAATTTATAAGAGGTTATTTATATTTGGAAACAAAATTATCAATAGAGTAGCGTAAGAGTGAAGAT
ATGTTATGTGGGTGCGAAACTAT----TGACAATTATTT-TCTCGGCTATGTTTGTGTTGCTATTTCCCTATGTAAACAA
C--AG--TCATCTTTGATGGTTGTGTAC----------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>chr3D_1358
--------------------------------------------------------------------------------
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--------------------------------------------------------------GAAATGTTCTCACATGAA
GAATTCCTCACAAATCCTTTTTGGAATGACTTCGACTCATCTCATCAGAGGCAAAA-TTTGTCCATGGAGGATTCATTCT
TCACATCGTTACTCCAAACAGAACCAAAATTAATTGTTCATTCTCGACTTACCGCTATGGGAGAGCCGGATGATGGTTCC
ATCTTTAAGATGGACATCAAGCATGTCTCAGAGGTAAACTCACTACCACATCTTGGTTTCTTTATTATCCTGTAAA----
----CATTCACACCAAGTACTATGCAGCAGGAACAAAAAATACATGATGGGAGATTATTATTTGATGATTCTCATGGTGT
ACCTACCCCTGGTTCTCGAAGCATGCAGTCCTCACCTATTCCAAGAGAAGATAAAATCCCTCTAGTTGGTCCAAATGGCA
TTTCTGATAGTGGTATTACACATGGTCCAACAACATCACGCAAGTACACATGCAAGATTTGCAGTGCCACATTCAACTCA
TCTCAAGCATATGGTGGTCACATGAGTTCGCATAGCAAAGCTAGGATGAAAAGCCTACAAAGTTGATCTTGCCAC--GCA
GCTAGATATCCCATGATTAATATTATTGGGACCAAT--ATT-TCTTGTAGCCACACAATGGATGAATGCACAAAGGTTTT
AGCGAGGGTGGAGAAAATTTCTAAGAGGTTATTTATTCCTGGAAACAAAATTATCAATAGA--AGCCCAAGGGTGAAGAT
ATATTATGTGGGTGTGAAACTAT----AGGAAATTATTT-TCTTGACTATGTTTGTGTTGTTGTTTCCCTATGTTAACAA
AAGAT--CCATCTTTGATGGTCGTGTAC----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------
>chr1A_2399
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAAACCG
AACCGATGCTGAAACCGAATAAACCGAATTTTCGGTTTTTTTACTATCACAGAAAAATTCAGTTTTTATGTCCACTAACC
GAACAGAATTCGGTAGGTTCGGTTTTCATCTCGGTTAACCAAACAAAAACCGAATAGACGTGGCTGATTGTACGCGCGCA
TCGTC------------------------GTCTCCCGGGAGTCACGCGACCAGCCTCCCACGATCGCCCACCTGACG---
-TGCGCGCATATCACATAAAGTGGGCCTGCGTGACCA---AAGTGCCAACAAGGATAAGGCCCAGCTCACGTGGACTTTT
TTTTGGTGAACGGTGTGCATGCGCGTACAAATATGCGAATAGCTGACCAGGCCATTCGCTCCTT-TAGTCCCACCTCGCC
CAACCGAGGAGATTAGCCAGATTTTTTGCCTATATAAGAGGGTGCAGCTAGTGCAATCAGAGCATGAATATTTGAGGCGT
GGTCATTCGGCATAAAACCGAAAACCGCACTAAAATTTCGGTTAAC--
>SNPs
-------------------------------S--------------------------------------S---------
---------S------------------------------------------------SSS-------------------
----S------------S---------S----------------------------------------------S-----
----S------S--------------------------------------------------------------------
----------------------------------------S-------------S-------------------------
-----------------------------S--------------------------------------------S-S---
-------SS--------------SS---------S---------------------------------------------
-------S---------------------------------------S------S----------------------S--
----------S---------------------S-------S---------------------------------------
--S--SS--------------------------------------------------------S----------------
-------------S--------S-S------S------S----SS---------S------S------------------
----------------------------------------S--------SS-----------------------------
--------S-------------------------------------------S-------------------S-------
--------------------------------------------------------------------------------
------------------------------------------------S----------S----S----S-S--------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
---------------------S-----------S-----------S----------------------------------
----------------------------S---------------------------------------------------
--------------------------------S-----------------S-----------------------------
--------------------------------------------------------------------------------
----S----------S----S---------------------------------------S-------------------
--------------------------------------------------------------------------------
-------------------------S-----------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-----------------------SSSS-----S-----------------------------------------------
--------------------------------------------------------------------------------
----------------------------S--S---S-------------S------S-----S-----S-----------
---------------S---S-------------------SS------------------SSSSSSSSSSSSSS-------
-SSSSS--S----------S----SS-------------------S-S---------S-S------SS------------
-----S-------------------S------------------------SS--SSS-----S----------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--------S--S---S--S-----S--------SSSSSSSSSS
S---S-----S--------S----------S------SSS-------S--------------S-S--S------S-----
------------------SS--S--------------------------SS-----SSSSSSS-S---------------
-S--S----------------------------------S------------------S------SS---S----S----
--------S-S--------S-------S--SS--SS-S--------SS
>forward_252
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GGAGGGAGAG
AAGACTTGACAG--------------------------------------------------------------------
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>reverse_1685
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----ATGACATGCCCGCCATACAT--------------------------------------------------------
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------------------------------------------------
>forward_1314
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--------------TTCCATGGCGAACTCCTCAT----------------------------------------------
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>reverse_2865
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----------------------------------------------------------------CCTGACGTGGGCTTTT
TGTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
