>input_sequence_65457
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------------------------------------------------------------------------ATGGGCAA
GTCATGGGCGCTCCTCACCCACCTCCACTCCGTCGCCGGGTACGCGT-CT------ACGTAATCTTCTTGCAAATCATGG
CTTCACAGCGGTGTTGAGA----------G-TCGAGTGATGTCTGATATGCTC-CTCTGGTTCGTTTCCCTGCGCAGGCC
AAGCATCACGCTGCTGTACCCTCTGTAAGTGCGAGGCGGTGTTGATCTTGATCAATTGTCTCTAGGTATGCGTAAGATCC
-----------------------------TTGGATGTGACGCCGACGGATCTGTG-TGCAGGTATGCGTCGGTGTGCGCC
ATGGAGAGTCCGTCCAAGGTGGACGACGAGCAGTGGCTGGCCTACTGGATCCTCTACTCCTTCATCACCCTCCTGGAGAT
GCTCGCCGAGCCCGTCCTCTACTGGTAACGTA---CCCTCCTCCAGTCCAGTAGCTACTCATTTAATTGTTACTAGTACT
TCATAACGCCCTGCCGGTGGATCTCATCATTTTGGTACCCGGTGGCGTCCAGGATACCGGTGTGGTACCCGGTGAAGCTG
CTGTTCGTGGCGTGGCTGGCGCTCCCGCAGTTCAAGGGCGCCTCCTTCATCTACGACAAGGTCGTCAGGGAGCAGCTAAG
GAAGTACCGCGGCAGGAACCGCCACGCCGACGCCGATCACAAGGTGCACATACTCAAGGTAACCAAGGAGTTTCAGTGCC
CTCTGCCGGGGAGGCCCGAGTTTCTTCTGTTTCTAATTGTTCCTTGTTGGGGGAAATGAAATTGCAGGCCGAGGCTGACC
ATGGTCATGTGCACTGAGGAGAAGGGGCAT-GG------CACTGGCAGATCCAGGAGCGTATCATTACTGTTGTGCAGGA
CTGCAGAATCTTAACTATTAGGTGTATCTTGTATCTGTTGTAAGCACGTCCAGAAGTATTAACAC-ACCACCCATGCGCT
CGCCTAATAAA---------------------------------------------------------------------
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--
>chr7D_1_TraesCS7D01G224100
AAGCATCTGCCTAAGCATCTCTCACTGTAAAAGGCCAAAGAGTGTAAGATTAAAAAGCTCATTATCTCAAGTCCGCCTCA
GAACTTTGGTCTAGCCATCACACTCTACGAGACCCAACTAGTTTTCTCTGACCTAGGCACGATGATCCTAAACTTAGTTT
TAGCCAGGCGGCCCACGTAAGATGTGAGGAGTGCAACATTTCAGCTAAGGGCAACTCCAACAGTTTGTGTATTGGTTTAT
TGATAAAATATGTCATGTCATCAACCAGCACCTTAATATATAACAACTTCAATGGGTTGTATTTAGTTTGCCTAACAGGA
TGTGAGATAATAAATAAGGTGCTCTCTCATTCTACATTGGAGATTGTGCAAGGGGTGTTGGTTCATGTACATACAACCTT
TTTCTCTTCCCTTATTTATTCCCTTATTTATTGTATGACACATTATTAGAAATCTTATGTGGCAAAGTCTGTCAAGAAGA
CGCCCTAATAACAAAGTCAGCAAAGCACACGCCGAGCGAGAGACTCGTACTCTGGTGACAGGAGGGCACCGCGCGTAGGC
ACGAGTCCCTCGCCACTCGCTCGCACGTGTCATCTTGCTGCCACGCGGAGGCGGAGCACGCACAGCCTCGCAGCCTGGAC
AGGAAGTCAAGAACCCTGGCATGGCATGCAAAGCAAGCAGCGTGGAGCGACCACAGAAAAGGAGGAGACTCGAGTGCCTT
CCTTGTCAGGTCGGCCAC-------CTACATCTCCGTGGAAGAAACCCCACCAGGATGCCGCCACGTACACGCCAAGCAC
CCGATGCCATTGCCTCCGGCCCACCACCGCCCTTGTGTTTAT---AATGCCATCCCACCCCCTGCCCATCCTCTGCTCGT
CCTCCACTGATTCTTTCTTCGCGTCTCACGTCAGTCGGCCGAATAGAGCTTTTGCTTCCCTCCGAGGCCTGCTGCTTCCG
TCCTAGGCACCTACGCACA----------------------GTGACTGCTGCGTTGAGTCGGCAAGGCGAGAATGGGCAA
GTCATGGGCGCTCCTCACCCACCTCCACTCCGTCGCCGGGTACGCGT-CT------ACGTAATCTTCTTGCAAATCATGG
CTTCACAGCGGTGTTGAGA----------G-TCGAGTGATGTCTGATATGCTC-CTCTGGTTCGTTTCCCTGCGCAGGCC
AAGCATCACGCTGCTGTACCCTCTGTAAGTGCGAGGCGGTGTTGATCTTGATCAATTGTCTCTAGGTATGCGTAAGATCC
-----------------------------TTGGATGTGACGCCGACGGATCTGTG-TGCAGGTATGCGTCGGTGTGCGCC
ATGGAGAGTCCGTCCAAGGTGGACGACGAGCAGTGGCTGGCCTACTGGATCCTCTACTCCTTCATCACCCTCCTGGAGAT
GCTCGCCGAGCCCGTCCTCTACTGGTAACGTA---CCCTCCTCCAGTCCAGTAGCTACTCATTTAATTGTTACTAGTACT
TCATAACGCCCTGCCGGTGGATCTCATCATTTTGGTACCCGGTGGCGTCCAGGATACCGGTGTGGTACCCGGTGAAGCTG
CTGTTCGTGGCGTGGCTGGCGCTCCCGCAGTTCAAGGGCGCCTCCTTCATCTACGACAAGGTCGTCAGGGAGCAGCTAAG
GAAGTACCGCGGCAGGAACCGCCACGCCGACGCCGATCACAAGGTGCACATACTCAAGGTAACCAAGGAGTTTCAGTGCC
CTCTGCCGGGGAGGCCCGAGTTTCTTCTGTTTCTAATTGTTCCTTGTTGGGGGAAATGAAATTGCAGGCCGAGGCTGACC
ATGGTCATGTGCACTGAGGAGAAGGGGCAT-GG------CACTGGCAGATCCAGGAGCGTATCATTACTGTTGTGCAGGA
CTGCAGAATCTTAACTATTAGGTGTATCTTGTATCTGTTGTAAGCACGTCCAGAAGTATTAACAC-ACCACCCATGCGCT
CGCCTAATAAATCAGGGTCTTCGTCTTTGATAATTTGACTTCCTGTCGCCGTGGT------ATGTGATTCTGTTTTTACG
--GAACCTTGTC-GAGGGCCAGGAGCTCTGGCAGTGCATTATAGCAGAAGAAAGA------------------GCAGTGC
ATTATAGCAGAAGAAAGTTGATCCAG--TTTACACCGGATAGAAGACCTCACAAAGTTAATTTTACAAGGAAAATCA--A
GCCGAAAACCGCATAAGCAACGAAGCCTCGTCACAATTGCAACAAACACACACCCAGCTCCGGAGCGGTCACAATTGCAA
CAAACACGGAGCGGTCACAATTGCAATAAACACACACGCGGCTCCGGAGCGGCAGCTCCGACATCCCCGGCTCCATGAGC
CATAGCGCCTCATTCGGGCGCCCTGTAGCCTTTGTTACATGAGACAGACCACGAACGTTGTGCCAAACATGAGACGACCA
TGAGACGACCGTCCACAGACCACGAACACTTTGTTACATGAGACGACCGTCCACAGACCACGAACACTTTGTTACATGAG
ACGACCGTCCAGAGACCATGAAACGTTGTGCCAAACATGAGACGACAGTCCACGGACCATTTTGTTACATGAGACGACCG
TCCACAGACCATGAACGTTGTGCGCCCTGTAGCCTTTGTTACATGAGACGACTGTCCACAGACCAAGAACGTTGCGCCAA
ACATTTCGGGCGCCCTGTGGCCTTTGTGTTGTGCCAAATATTTCGGGCGCCCTGTGGCCTTTGTTACATGAGACGACTGT
CCACAGTGCCAAACATCCGGGGCCGACTTTCTGCCAGACCAACCCCAGGCCGTGTCCGACCGGGCAGACCGTGAACCTAC
CCTATAGAGCCGCCGTTGCATCGCCATCCGAGGCCTTGTCCAGAGCCGTTGCCCCGGCATCCACCGCCCTAACCACGAAC
CCATCACCCCACAAAGGTCAATGATTCAAGGTGATGCCTTCCCTACAAAGGTCAAGGATTTCAAGGTGGTGCCTTCAAGA
AG
>chr7A_519
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--------------------------------------AGAGACTCGTACTCTCATGACAGGAGGGCGCCGCGCGTAGGC
ACGAGTCCCTCGC-----------ACGTGTCGGCGTGCCGCCACGCGGAGCGCT-------ACAGCCTCGCAGCCAGGAC
AGCAAGTCAAGAACCCTGA-----CATGCAAAGCAAGGAGCGTGGAGCCACCACGAAAAGC---GAGGCTCGAGTGCCTT
CCTTGTCAGGTCGGCCGCTCCG--------TCCCTGTGGAAGAACCCCCA----GATGCCGCCACGTACACGCCAAGCAC
CCGGTGCCATCGCCACCGGCCCACCACCGCGAGCATGCTTTTATAAAAGCCGTCTCA-CCCA------------GCTCGT
CTCCTACTGA----TTCTTCGCGTCTCACGGCAGTCGGCCGAATAGAGCTTT-GCTTCTCCCCGAGATCTCGTGCTTCCG
CCCAAGGCGTAGGAAGGCACCCACGCACGGC------------GACTGGTGCGTTGAGCCGGGAAGGCGAGAATGGGCAA
GTCATGGGCGCTCCTCACCCACCTCCACTCCGTCGCCGGGTACGTAT-CCTATCCTATCCTATCTACTTGCAGATCT-AT
GGTGTTCGACTCTTTCCTGCGGGCGAGATG-CCGAGTGTTGCCTGATATCCTCTTGCCTCTTCGTTTCCTTGCGCAGGCC
GAGCATCACGCTGCTGTACCCTCTGTAAGT------------------TGATCGATCGTTTGTGATGCTTTTTAGTACTG
ATGG-------------GTGATCCTTGTGTTGGATGTGGCACTGACGGGTCTGTACTGTAGGTATGCGTCGGTGTGCGCC
ATGGAGAGCCCGTCCAAGGTGGACGACGAGCAGTGGCTGGCCTACTGGATCCTCTACTCCTTCATCACCCTCCTGGAGAT
GCTCGCCGAGCCCGTCCTCTACTGGTAACTTA---CT--------------CAGCTACTGATTTCATTATTTTGTTG---
----A------TGCCGGTGGATCTAATTATTTTGC---TGAT--GCGTCCAGGATACCGGTGTGGTACCCGGTGAAGCTG
CTGTTCGTGGCGTGGCTGGCGCTCCCGCAGTTCAAGGGCGCCTCCTTCATCTACGACAAGGTCGTCAGGGAGCAGCTCAG
GAAGTACCGCGGCAGGAACAGCCACGCCGACGCCGACCACAAGGTGCACATACTCAAGGTAACCAAGGAATGTCAGTGCT
CTCTGCCACGGAGGCCCGAGTTTCTTCTGTTTCTAATTGTTCCTTGTTGGGGAAAATGGAATTGCAGGCCGAGGCTGACC
ATGGTCATGTGCACTGAGGAGCTGACAAGGACCTGGGCACACTGGGAGATCCAGGAGCATAACC-TACTGTTGTGCAGGA
CTGCGGAATCTTAACTATTAGGTGTATCTTGTATCTGTTGTAAGCACATCGAGAAGTATTAACACGACCACCCATGCGCT
CGCCTAATAAATCAGGGCCGTCGTCTTTGATAATTTGACTTCCTGTCGCCGTGGTTT-CAGATGTGGTTCTTTTTGTTGA
CCGAATCTCGTCAGAGTGCCAGGAGCTCTGGCACTGCATTATA-------------------------------------
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--
>chr7B_721
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CCTTGTCAGGTCGGCCACTCTAGCTCTAGCTCTCAATGGAAGAAACCCCAT---GATGCCGCCACGTACACGCCAAGCAC
CCGGTGCCATTGCCACCGGCCCACCACCGCTCTC--GTTTAT---AAAGCCATCTCT-CCCCTGCCCATCCTCTGCTCGT
CCTGCACTGATTCTTTCTTCGCGTCTCACGTCAGTCGGTCGAATAGAGCTTT-GCTTCCCTCCGAGGTCTCGTGCTTACG
GCCGAGATACCTACAGCGGTGACGGTGCATCGTTCGTTCCGGTGACTGCTGT----------GAAGGAGAGAATGGGCAA
GTCATGGGCGCTCCTCACCCACCTTCACTCCGTCGCCGGGTATGTATCCC------ATCCTATCTACTCGCAGATCTCAT
GGTGTTCTTTTCTTTCCTGTGGGCGAGCCGATCTAGTGAAGTCTGATATCCTC-TGATGCTTCGTCTCCTTGCGCAGGCC
AAGTATTACGCTGCTGTATCCTCTGTAAGT------------------TGATCAATCGTTTGTAGTACTACTACTTTATT
AGTAGATGGGCAATCCCGTAATTCTTGTGTTGGATGTGGCACTGACGGATCTGTTCTGTAGGTATGCGTCGGTGTGCGCC
ATGGAGAGCCCGTCCAAGGTGGACGACGAGCAGTGGCTGGCCTACTGGATCCTCTACTCCTTCATCACCCTCATGGAGAT
GCTCGCCGAGCCCGTCCTCTACTGGTAACTTATTACCC---TCCAGTCCAGCAGCTACCCATTTAATCTGTGCAGT----
-----ACTCCCTGCCGGTCGATATCATTATTGCTCTGTTGAT--GCGTCCAGGATACCGGTGTGGTACCCGGTGAAGCTG
CTGTTCGTGGCGTGGCTGGCGCTCCCGCAGTTCAAGGGCGCCTCCTTCATCTACGACAAGGTCGTCAGGGAGCAGCTCAG
GAAGTACCGCGGAAGGAACCGCAACGCCGACGCCGATCACAAGGTGCACATACTCAAGGTAACCAAGGATTTTCAGTGCT
CTCTGCCGGGGAGGCCCGAGTTTCTTCTGTTTCTAAT-GTTCCTTGATGGGGAAAATGAAATTGCAGGCCGAGGCTGACC
ATGGTCATGTGCATTGAGGAGAAGGGGCCTGGG------CACTGGGAGATCCAGGAGCATAACC-TACTGTTGTGCACAA
CTGCAGAATCTTAACTACTAGGTGTATCTTGTATCTGTCGTAAGCACATCGAGAAGTATTAACAC-ACCACGCATACCCT
CGCCTAATAAATCAGGGCCGTCGTCTTTGATAATTTGACTTCCTGTCGCCGTGGTTTGCAGATGTGGTTCTTTTTTTATG
--GAATCTTGTCAGAGGGCCAGGGGCTCTGGCACTGCATTATAGCAGAACAAAGTTGGTTCAGTTTAATACCGGCACTGC
ATTATAGCAGAAGAAAGTTAGATCCAGTTTAATACCGGATCGAAAACTTCACATACTGGCCAGTTTATAAGAAACACCGA
GCCGAAAACGGCACAAGCAAGGAAGCCTCGT-------------------------------------------------
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>chr4B_992
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---------------------------------------------------------------AAGGAGAGAATGGGCAA
GTCATGGGCGTTCGTCACCCACCTCCACTCCGTCGTCGGGTATGTAT-CC------ATCCTATCTACTCGCAAATCTCAT
GGTGTTCCACTCTTTTCTGCGGGCGAGATG-TCGAGTGTTGTCTGCTATCCTC-TGCCTCTTCGTTTCCTTGCGCAGGCC
AAGCATCACGCTGTTGTACCCTCTGTAAGT------------------TGGTCAATCGTTTGTGATACTTTTTAGTGCTG
ACGG-------------GTTATCTTTGTGTTGGATGTGACACTAACGGATCTGTTCTGTAGGTATGTGTCGGTGTGCGCC
ATGGAGAGCCCGTCCAAGGTGGACGACGAGTAGTGGCTGGCCTACTGGATCCTCTACTCATTCATCACCCTCCTCGAGAT
GCTCGCCGAGCCCGTCCTCTACTGGTAACTTA---CCC---TCCAGTCCAGCAGCTACTCATTTAGTTTGTACTCCTACT
TAATA------TGCCGGTCCATCTCATTACTTTGC---TGAT--GCGTCCAGGATACGGATGTGGTACCCAGTGAAGCTG
C-------------------------------------------------------------------------------
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--
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------SS------------S------------
-------------SSSSSSSSSSS-------SS-S---S-----------SSSSSSSSSSS--------------S----
--S---------------SSSSSS-------------S----------S-----SS---SSSSS---S------------
----------------------------SS----S---------------SSSS--------------------------
---S----------S---------------S--SS------------S------S--S----------------------
----------------------------------------------------S--------------S--SS--------
S--S----------SSS-----------------------------------------S---S-----------------
--------------------------------------------SS---S-------SSSS----S----------SSSS
SS-SSSS-SSSSS--SSSS------------------------------S----SS---S---------S----------
------------------------------SSSSSSSSSSSSSSSSSS--------S--S-S---SSS-S-S--SS-SSS
----------------------------------------S-S-----------S---S---------------------
--------S-----------------------------------------------------------------------
-----------------------------S--------SSS----------S----------------S-----SS----
-S-----S-------------------S------S-SSSSSSSS------------------------------------
-----------------------------------------------------------------------------S--
---------------------------------------------------------------------S---------S
----------------------------------------------------S---------------------------
----------------------------S----------------S------------S--S-SS---------------
-----------------------------------------------S--S-----------------------------
-----------------S-S----------------------------------------------S----S------S-
-----S---------------------------S---------------S----S---------------------S---
-------------------SSSS-SS----S-S-------S---S--S-----S-S-SSSSSS-SS-SSSS---SSS---
---------S---S------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS
>forward_91
-----------------------------------------------------------------------TCCGCCTCA
GAACTTTGGTC---------------------------------------------------------------------
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>reverse_2755
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----------------------------------CAAATATTTCGGGCGCCCTG--------------------------
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--
