>input_sequence_65433
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------------------------------------------------------ACCCTGCCGCCCGAAGGCTGCAGCCA
TGCGGCGGCACTACGCCGAGCTCCTCCGCCGTGCCGCCTCGCTGCCGTCTCTCTCGCTCGTGGCCTCCCTCCACGCCGCC
GCGCTGCGCCGAGGCGCGGTCCTCGTCCCCTCGCTCATCCACGCCTACTCCGCGTGCGGCGACCCAGCCTCCGCCCGCAG
CGTGTTCGACGGATTGCCCGCACAGGAGCAGACACTCTCCGCGCGCACCGCGCTGGCCAGCGCTATGTCCGCGCACGGCA
GGTGCCGGGAGGTGTTCGGCCTGTTCCGCGGCTGGGAGGGGGAGATGGACGACAAGGCGGTGACGGTGGTCCTCGCCGCG
TGCGCTAG------------------------------------------------------------------------
------------------------------------------------------------GGCCGGGATGATCAGCGAGG
GGAGGGAAGTCTTTGCGAGGGTGCGGAGGCCAGCGTTGCAGCACTACACGTGCATGGTGGAGATGCTGGGACGGGCCGGG
GAGGTCGAGGAGGCAGAGGGGCTGCTGGCGCGGATGGAGGCGCGACCGGACAGGATCATCTGCACGGTGCTGCTCGCGGC
GTGCCGGGTGCATGGCCGTGTCGATGTGGCTGAGAGAGTGGCTAGGTTGATGAGCGAGTATGGCATTGTATGAATTTTGG
CATATTGATCAGTTGACAAACTGGCCATTGTGTTAGGCTGTTAGCCCAAGAGCAGTGATCAAAACCATTGTGATATGGAG
CTGATAACACATAGTTTGGTTGACGGCAATGCCGCAATGGTGGTTCTTGAAGTTCATGCAGTAATGCAG--TACAACACA
AGCCCCTGGCCGGTGAGATCTGAATTTTGTAGAAGTCTATGTTGCAGTGGACGAACCACATGAGCGCCAGCACACTTCAC
TGCTTGAACCTGTATGGAAGCACAATTCGAAGGCATCTATCAGATTGCTATAAAATGAGTAATGTCAG------------
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>chr4A_1_TraesCS4A01G200500
GTTGATCTTGATAATAGACAACCTAAAAATAAAAGGTATGACAAAAGAGACTTTGTTGCTAGAAAACACGGTAAGGAAAG
AGAACCATGGGTTCAAAAACCTATGTCTTTTTCACCCAAGTCAACTAAAAAGAATGATGATGAAGAATTTGAACGCTTTG
TTGAAATGCCGATGTCAGTATTTTTTGCTACTCGCTTGACTGATATCTTGAAAATGCCTTCATATGCAAAGTATATGAAA
GACATCATCACAAATAAGAGAAAAATACTGAAAGCTGAAATCTCCTCTATGCTTGCTAATTATACTTTTAAAGATGGAGT
ACCTAAAAAACTTAGAGATCCGGAAATA-CAACTATACCTTGCTTTATCAAAAAAT-TTACGTGAAAATTGCTTTGTGTG
ATTTAGGAGCTGGTGTTAGTATTATACCTTTCTCTTTATATAAAAGACTTGATTTGAATAAACTCACACTGTATTGAGAT
ATCTTTACAAATGGCTGATAAATCAACTGCTATAACTATCGCTATCTGTGAGGATGTGCCCGTTGTTGTTGCTAATGTTA
TTATTTTGACTGATTTTGTTATACTTGAGATGCTCGAAAACGACAACATGTCGATTATCCTTGGTAGACTCTTCTTGAAT
ACTGCAGGGGTTGTTATTGATTGCAATAAAATCAAGGTCAC-TTTTTATATTAATAGCAATGAGCATACAATGCACTTTC
CGAAAAAACAATTCCAAATAAATGATTTTAGTATTATTGAAAAATCTCCGACGATTCTTTTCTTATACTCTCTTCATTCT
AAAATAGATGACCCAACTTTATACTAGTATAAAGTTATAAAGTTGGGTCATTTATTTTGGAATAGAGGGAGTACTTTTTT
GGTTTGGGTTGGTCCTGG--------CGTCTAGAGCGCGCGGTAG-TTTTTGCGACGGTAAA--TATTGTACGTACGAGC
AATCCAACGGCCCAGAGCAGTCGGTTTTTACCAAAGTGCAATCCCTTCTCTCCAACCCTGCCGCCCGAAGGCTGCAGCCA
TGCGGCGGCACTACGCCGAGCTCCTCCGCCGTGCCGCCTCGCTGCCGTCTCTCTCGCTCGTGGCCTCCCTCCACGCCGCC
GCGCTGCGCCGAGGCGCGGTCCTCGTCCCCTCGCTCATCCACGCCTACTCCGCGTGCGGCGACCCAGCCTCCGCCCGCAG
CGTGTTCGACGGATTGCCCGCACAGGAGCAGACACTCTCCGCGCGCACCGCGCTGGCCAGCGCTATGTCCGCGCACGGCA
GGTGCCGGGAGGTGTTCGGCCTGTTCCGCGGCTGGGAGGGGGAGATGGACGACAAGGCGGTGACGGTGGTCCTCGCCGCG
TGCGCTAG------------------------------------------------------------------------
------------------------------------------------------------GGCCGGGATGATCAGCGAGG
GGAGGGAAGTCTTTGCGAGGGTGCGGAGGCCAGCGTTGCAGCACTACACGTGCATGGTGGAGATGCTGGGACGGGCCGGG
GAGGTCGAGGAGGCAGAGGGGCTGCTGGCGCGGATGGAGGCGCGACCGGACAGGATCATCTGCACGGTGCTGCTCGCGGC
GTGCCGGGTGCATGGCCGTGTCGATGTGGCTGAGAGAGTGGCTAGGTTGATGAGCGAGTATGGCATTGTATGAATTTTGG
CATATTGATCAGTTGACAAACTGGCCATTGTGTTAGGCTGTTAGCCCAAGAGCAGTGATCAAAACCATTGTGATATGGAG
CTGATAACACATAGTTTGGTTGACGGCAATGCCGCAATGGTGGTTCTTGAAGTTCATGCAGTAATGCAG--TACAACACA
AGCCCCTGGCCGGTGAGATCTGAATTTTGTAGAAGTCTATGTTGCAGTGGACGAACCACATGAGCGCCAGCACACTTCAC
TGCTTGAACCTGTATGGAAGCACAATTCGAAGGCATCTATCAGATTGCTATAAAATGAGTAATGTCAGTACTATAGACCA
TCTGCAGTGGAATGCCCGTCAGTTTTCTCAGTTGCTGACTGTCTACGCTCTCTGATTAGCTTAATGATGGGCGTACATTT
C-------TGGACTGTAAGTTGTCAAGCTTAATGGAGCCTGGCAGCCCGTAATGCAACACAAAGAGAAGTCGCCAAAGTT
AATAGTCGAACCTGTCAATATTGTTAATAGCTGTA---------------------------------------------
------ACTGTCAATCTTGACTTCTTGAGTGAATTGTTGAGGAGCAGTTTCGATCAAATTTTGTTGAAGCTGGATGTGGT
GGGAACCATCAAAATACAGGAAGTCTGCTCCAAGAACATGTTGTGAGATCTTCCAGGATTCAGTTTCTGGGTACTTCAGA
GTTCTGGCATTCTCTCACTGTGGAAACTGTACCTCCTGCTATGGTTTCAATTTACCGAGCATAGAACGTCTGTTTTAAAT
GGTTGGTCTCTTCATTATTGTGTCCGCTGTCACAGCAATCACCGGATCTTATTCTGGACATATGTGCAATGATACTTGAG
CAAATCAGCTCTCTGATGTAAATACTCACGTTGACGCAGAACGTCCATCTCGCATGCGACACATGGGTGCGAGGGAATGC
GGAGTTGGGCGTTGCTGGTAAGAGACAGAACAAGTGGAACCTGGTTGGGAAATTAGCAGGAGAAATGGGGAAGTGGTTGT
TCTGGTCATGAGCACACCTGAGCTCGTTATCTGGGCGGTTCGGCGCTCCATTGGGATGTGGTGCATTCAATTCCTGTGCC
AGTGCGTTGTTCGTTTTTAAAGGAGGAAATGTGGAAATACAGTAGATGGGTACGACGTACGTAGGTCTAGTTATGGAGCG
AACGTTTGCTGCCGTGATGGATCTAAAGGAGAGCCATGGCTCGTGACGTCAGCCCCGTCCTGATCCGTGGATCAGGATGT
ATGTTTTCCAGTAGGACGGTAGTAGAGTAGTGAATGAGGGATGGCACCAAGACGGAGTTGCCTCCAACCTCTACCTGCTC
TGTTTG
>chr4A_1
GTTGATCATGATAACCCACAACCTAAAAATAAAAGATATGACAAAAGAGACTTTCTTGCTAGAAAACACGGTAAAGAAAG
AGAACCGTGGGTTCAAAAACCTATGCCTTTTCCACCCAAGTCAACTAAAAAGAATGATGATGAAGAATTTGAACGCTTTG
CTGAAATGCTGAGGCCAGTCTTTTTGCGTACTCGCTTGACTGATATCTTGAAAATGCCTCCTT--GCAAAATATATGAAA
GACATCATCACAAATAAGAGAAAAATACCGGAAGCTGAAATCTCCACTATGCTTGCTAATTACACTTATAAAGATGGAGT
ACCTAAAAAACTTGGAGATCTGGGAATACCAACTATACCTTGCTCTATCAAAAAGAATTATGTGAAAACTGCTTTGTGTG
ATTTAGGAGCTGGTGTTAGTGTTATGCCTTTCTCTTTATATAAAAGACTTGACTTGAATAAACTCACACC-TACTGAAAT
ATCTTTGCAAATGGCTGATAAATCAACTGCCATACCTATCGGTATTTGTGAGGATGTGCCTGTTGTTGTTGCTAATGTTA
CTATTTTGACTGACTTTGTTATACTTGAGATGCCCGAGGACGACAACATGTCGATTATCCTTGGTAGGCCCTTCTTGAAT
ACTGGAGGGGTTGTTATTGATTGCAATAAAAGCAAGGTCAC-TTTTCATATTAATGGTAATGAGCATACTGTGCACTTTC
CAAAGAAACAATTCCAAGTGAATGGTATTAATGTTATTGAAAAATCTCCGAC----------------------------
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>chr3A_1
GTTGATCTTGATAGCCCACAACCTAAAAATAAAAGATATGACAAAAGAGACTTTGTTGCTAGAAAACATGGTAAAGAAAG
AGAAGCGTGGGTTCAAAAACCTATGCCTTTTCCACCCAAGTCAACTAAAAAGAATGATGATGAAGAATTTGATCGCTTTG
TTGAAATGCCGAGGCCAGTTTTTTTGCATACTCGCTTGACTGATATCTTGAAAATGCCTCCTTATGCAAAGTATATGAAA
GACATCATCACAAATAAGAGAAAAATACCGGAAGCTGAAATATCCACTATGTTTGCTAATTATACTTTTAAAGATGGAGT
ACCTAAAAAACTTGGAGATCCGGGAATACCAACTATACCTTGCTCTATCAAAAAGAATTATGTGAAAACTGCTTTGTGTG
ATTTAGGAGCTGGTGTTAGTGTTATGCCTTTCTCTTTATATAAAAGACTTGAGTTGAATAAACTCACACC-TACTGAAAT
ATCTTTGCAAATGGCTGACAAATCAACTGCCATACCTATCGGTATCTGTGAGGATGTCCCCGTTGTTGTTCCTAATGTTA
CTATTTTGACCGACTTTGTTATACTTGAGATGCTCGAGGACGACAACATGTCGGTTATCCTTGGTAGACCCTTCTTGAAT
ACTACAGGGGTTGTTATTGATTGCAATAAAAGCAAGGTCAC-TTTTCATATCAATGGTAATGAGCATACGGTGCACTTGC
CGAAGAAACAATTCCAAGTGAATGGTATTAATGTTATTGAAAAATCTTCGAC----------------------------
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>chr7D_1
GTTGATCTTGATAACCCACAACCTAAAAATAAAAGATATGACAAAAGAGACTTTGTGGCTAGGAAACACGGTAAAGAAAG
AGAACCGTGGGTTCAAAAACCTATGCCTTTTCCACCCATGTCAACTACAAAGAAAGATGATGAAGAATTTGAACGCTTTG
CTGAAATGCTGAGGCCAGTCTTTTTGCGTACTCGCTTGACTGATATCTTGAAAATGCCTCCTTATGCAAAGTATATGAAA
GACATCATCACTAATAAGAGAAAAATACCTGAAGCTTAAATCTCCACTATGCTTGCTAATTATACTTTTAAAAATGGAGT
ACCTAAAAAACTTGGAGATCCGGGAATACCAACTATACCTTGCTCTATCAAAAAGAATTATGTGAAAACTGCTTTGTGTG
ACTTAGGAGCTGGTGTTAGTGTTATGCCTTTCTCTTTATATAAAAGACTTGACTTGAATAAACTCACACC-TACTGAAAT
ATCTTTGCAAATGGCTGACAAATCAACTGTCATACCTATCGGTATCTGTGAGGATGTGCCCGTTGTTGTTGCTAATGTTA
CTATTTTGACTGACTTTGTTATACTTGAGATGCCCGAGGACGACAACATGTCGATTATCCTTGGTAGACCCTTCTTGAAT
ACTGCATGGGCTGTTATTGATTGCAATAAAAGCAAGGTCAC-TTTTCATATTAATGGCAATGAGCATACGGTGCACTTTC
CGAAGAAACAATTCCAAGTGAATGGTATTAATGTTATTGAAAAATCTCCGACAAT-------------------------
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>chr6A_1
GTTGATCTTGATAACCCACAACCTAAGAATAAAAGATATGACAAAAGAGACTTTGTTGCTTGAAAACACGGTAAAGAAAG
AGAACCATGGGTTCAAAAACCTATGCCTTTTCCACCCAAGTCAACTAAAAAGAATGATGTTGAAGAATTTGAACACTTTG
CTGAAATGCTGAGGCCAGTCTTTTTGCGTACTCGCTTGACTGATTTCTTGAAAATGCCTCCATATGCAAAGTATATGAAA
GACATCATCACAAATAAGAGAAAAATACCGGAAGCTGAAATCTCCACTATGCTTGCTAATTACACTTTTAAAGATGGAGT
ACCTAAAAAACTTGGAGATCCGGGAATACCAACTATACCTTGCTCTATCAAAAAGAATTATGTGAAAACTGCTTTGTGTG
ATTTAGGAGCTGGTGTGAGTGTTATGCCTTTCTCTTTATATAAAAGACTTGACTTGAATAAACTCACACC-TACTGAAAT
ATCTTTGCAAATGGCTGACAAATCAACTGCCATACCTATTGGTATCTGTGAGGATGTGCCCGTTGTTGTTGCTAATGTTA
CTATTTTGACTGACTTTGTTATACTTGAGATGCCCGAGGACGACAACATGTTGATTATCCTTGGTAGACCCTTCTTGAAT
ACTGCAGGGGCTGTTATTGATTGCAATAAAAGCATGGTCAC-TTTTCATATTAATGGAAATGAGCATACGGTGCACTTTT
CGAAGAAACAATTCCAAGTGAATGGTATTAATGTTATTGAAAAATCTCTGACAAT-------------------------
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>chr2D_1
GTTGATCTTGATAACCCACAACCTAAGAATAAAAGGTATGATAAAAGAGACTTTGTCGCTAGAAAACACGGTAAAGAAAG
AGAACCGTGGGTTCAAAAACCTATGCCCTTTCCACCCAAGTCAACTAAAAATAATGATGATGAAGAATTTGAACGCTTTG
CTGAAATGCTGAGGCCAGTCTTTTTGTGTACTCGCTTGACTGATATCTTGAAAATGCCTCCTTATGCAAAGTATATGAAA
GACATCATCACAAATAAGAGAAAAATACCGGAAGCTGAAATCTCCACTATGCTTGCTAATTATACTTTTAAAGATGGAGT
ACCTAAAAAACTTGGAGATCCGGGAATACCAACTATACCTTGCTCTATCAAAAAGAATTATGTGAAAACTGCTTTGTGTG
ATTTAGGAGCTGGTGTTAGTGTTATGCTTTTCTCTTTATATAAAAGACTTGACTTGAATAAACTCACACC-TACTGAAAT
ATCTTTGCAAATGCCTGACAAGTCAACTGCCATACCTATCGGTATCTGTGAGGATGTGCCCGTTGTTGTTGCTAATGTTA
CTATTTTGACTGACTTTGTTATACTTGAGATGCTCGAGGATGACAACATGTCGATTATCCCTGGTAGACCCTTCTTGAAT
ACTCCAGGGGATGTTATTGATTGCAATAAAAGCAAGGTCAC-TTTTCATATTAATGGTAATGAGCATACGGTGCACTTTC
CGAAGAAACAATTCCAAGTGAATGGCATTAATGTTATTGAAAAATCTCCGAC----------------------------
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>chr2D_1
GTTGACCTTGATAACCCACAACCTAAAAATAAAAGATATGACAAAAGAGACTTTGTTGCTAGAAAACATGGTAAAGAAAG
AGAACCGTGGGTTCAAAAACCTATGCATTTTCCACCCAAGTCAACTAAAAAGAAAGATGATGAAGAATTTGAACGCTTTG
CTGAAATGCTGAGGCCAGTCTTTTTGCGTACTCGCTTGACTGATATCTTGAAAATGCCTCCTGATGCAAAGTATATGAAA
GACATCATCACAAATAAGAGAAAAATATCGGAAGCTGAAATCTCCACTATGCTTGCTAATTATACTTTTAAAGATGGAGT
ACCTAAAAAACTTGGAGATCCGGGAATACCAACTATACCTTGCTCTATCAAAAAGAATTATGTGAAAACTGCTTTGTGTG
ATTTAGGAGCTGGTGTTAGTGTTATGCCTTTCTCTTTATATAAAAGACTTGACTTGAATAAACTCACACC-TACTGAGAT
ATCTTTGCAAATAGCTGACAAATCAACTGCCATACCTATCAGTATCTGTGAGGATGTGCCCGTTGTTGTTGCTAATGTTA
CTATTCTAACTGACTTTGTTATACTTGAGATGCCCGAGGATGACAACATGTCGATTATCCTTGGTAGACCCTTCTTGAAT
ACTGCAGGGGCTGTTATTGATTGCAATAAAAGCAAGGTCAC-TTTTCATATTAATGGCACTGAGCATACGGTGCACTTTC
CGAAGAAACAATTCCAAGTGAATGGTATTAATGTTATTGAAAAATCTCCGAC----------------------------
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>chr1D_1
GTTGATCTTGATAACCCACAACCTAAAAATAAAAGATATGACAAAAGAGGCTTTGTTGCTAGAAAACACGGTAAAGAAAG
AGAATCGTGGGTTCAAAAACCTATGCCTTTTCCACCCAAGTCAACTAAAAAGAAAGATGATGAAGAATTTGAACGCTTTG
TTGAAATGCTGAGGCCAGTCTTTTTGCGTACTCGCTTGACTGATATCTTGAAAATGCCTCCTTATGCAAAGTATATGAAA
GACATCATCACAAATAAGAGAAAAATACCAAAAGCTGAAATCTCCACTATGCTTGCTAATTATACTTTTAAAGATGGAGT
ACCTAAAAAACTTGGAGATCCGGGAATACCAACTATACCTTGCTCTATCAAAAAGAATTATGTGAAAACTGCTTTGTGTG
ATTTAGGAGCTGGTGTTAGTGTTATGCCTTTCTCTTTATATAAAAGACCTGACTTGAATAAACTCACACC-TACTGAAAT
ATCTTTGCAAATGGCTGACAAATCAATTGCCATACCTATCGGTATTTGCGAGGATGTGCCCGTTGTTGTTGCTAATGTTA
CTATTTTGACTGACTTTGTTATACTTGAGATGCCCGAGGACGACAACATGTCGATTATCCTTGGTAGACCCTTCTTGAAT
ACTGCAAGGGCTGTTATTGATTGCAATAAAAGCAAGGTCAC-TTT-CATATTAATGGTAATGAGCATACGGTGCACTTTC
CAAACAAACAAATCCAAGTGAATGGTATTAATGTTATTGAAAAATCTCCGAC----------------------------
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>chr1D_1
GTTGATCTTGATAACCCACAACCTAAGAATAAAAGATATGACAAAAGAGACTTTGTGGCTAGGAAACACGGTAAAGAAAG
AGAACCATGGGTTTAAAAGCCTATGACTTTTCCACCCAAGTCAACTAAAAAGAATGATGATGAAGAATTTGAACGCTTTG
CTGAAATGCTGAGGCCAGTCTTTTTACGTACTCACTTGACTGATATCTTGAAAATGCCTCCTTATGCAAAGTATATGAAA
GACATCATCACAAATAAGAGAAAAATACCGGAAGCTGAAATCTCCACTATGCTTGCTAATTATACTTTC-AAGATGGAGT
ACCTAAAAAACTTGGAGATCCGGGAATACCAACTATACCTTGCTCTATCAAAAAGAATTATGTGAAAACTGCTTTGTGTG
ATTTAGGAGCTGGTGTTAGTGTTATGCCTTTCTCTTTATATAAAAGACTTGACTTGAATAAACTCACACC-TACTGAAAT
ATCTTTGCAAATGGCTGACAAATCAACTGCCATACCTATCGGTATCTGTGAGGATGTGCCCGTTGTTGTTGCTAATGTTA
TTATTTTGACTGACTTTGTTATACTTGAGATGTCCGAGGACGACAACATGTTGATTATCCTTGGTAGACCCTTCTTGAAT
ACTGCAGGGGCTGTTATTGATTGCAATAAAAGTAAGATCACTTTT-CATATTAATGGCAATGAGCATACGGTGCACTTTC
CGAAGAAACAATTCCAAGTGAATGGTATTAATGTTATTGAAAAATCTCCGACAAT-------------------------
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>chr1A_2
-TTGATCTTGATAACCCACAAGCTAAAAATAAAAGATATGACAAAAGAGACTTTGTTGCTAGGAAACA-GGTATAGAAAG
AGAACCGTGGGTTCAAAAACCTATGCCTTTTCCACCCAAGTCAACTAAAAAGAATGATGATGAAGAATTTGAACGCTTTG
CTGAAATGCCGAGGCCAGTCTTTTTGCGTACTCGCTTGATTGATATCTTGAAAATGCCTCCTTATGCAAAGTATATGAAA
GACATCATCACAAATAAGAGAAAAATACCGAAAGATGAAATCTCCACTATGCTTGCTAATTATACTTTTAAAGATGGAGT
ACCT-AAAAACTTGGAGATCCGGGAATACCAACTATACCTTGCTCTATCAAAAAGAATTATGTGAAAACTACTTTATGTG
ATTTAGGAGCTGGTGTTAGTATTATGCCTTTCTCTTTATATAAAAGACTTGACTTGAATAAACTCACACC-TACTGAAAT
ATATTTGCAAATGGCTGACAAATCAACTGCCATACCTATCGGTATCTGTGAGGATGTGCCCATTGTTGTTGCTAATGTAA
CTATTTTGACTGACTTTGTTATACTTGAGATGCTCGAGGACGACAATATGTCGATTATCCTTGGTAGACCCTTCTTGAAT
ACTGCAGGGGCTGTTATTGATTGCAATAAAAGCAAGGTCAC-TTTTCATATTAATGGCAATGAGCATATGGTGCACTTTC
CGAAGAAACAATTCCAAGTGAATGGTATTAATGTTATTGAAAAATCTCCGACAAT-------------------------
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>chr4D_875
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-----------------------------------------------------------------------------TTT
GGTTTGGGTTGGTCCTGGCGGCTGTTCGTCTAGAGCGCGCGGTAGGTTTTTGCGACGGTAAAAATATTGTATGTACGGGC
AATCCAACGGCCCAGAGCAGCCGG-TTTTACCAAAGTGCAATCGCTTCTCTCCAACCCTGCCTCCCGAAGGCTGCAGCCA
TGCGGCGGCACTACGCCGAGCTCCTCCGCCGCGCCGCCTCGCTGCCGTCTCTCTCGCTGGTGGCCTCCCTCCACGCCGCC
GCGCTCCGCCGAGGCGCGGTCCTCGTCCCCTCGCTCATCCACGCCTATTCCGCCTGCGGCGACCCAGCCTCCGCGCTCAG
CGTGTTCGACGGATTGCCCGCACAGGAGCGGACGCTCTCTGCGCGCACCGCGCTGGCCAGCGCCATGTCCGCGCACGGCA
GGTGCCGGGATGTGCTCGGCCTGTTCCGCGGACGGGAGGGGGAGATGGACGACAAGGCGGTGACGGTGGTCCTCGCCGCG
TGCGCTAG------------------------------------------------------------------------
------------------------------------------------------------GGCCGGGATGGTCAGTGAGG
GGAGGGAAGTCTTCGCGAGGGTCAGGAGGCCAGCATTGCAGCACTACACGTGCATGGTGGAGATGCTCGGACGTGCCGGG
GAGGTCGAGGAGGCAGAGGGGCTGCTGGCGCGGATGGAGGCACGCCCGGACAGGGTCATCTGCATGGTGCTGCTCGCCTC
GTGCCGGGCGCATGGCCGTGTCGATGTGGCTGAGAGAGTGGCTAGGTTGATGAGCGAGTATGGCATTGTATGAATTTTGG
CATATTGATCAGTTGACAAACTGGCCATTGTGTTAGGCTGTTAGCCCAAAATCAGTGATCAAAACCATTGTGTTATGGAG
CTGATAACACATAGTTTGGTTGACGGCAA--------GGGTGGTTCCTGAAGTTCATGCAGTAATGCAG--TACAACACA
AGCACCTGGTCGGTGAGATCTGAATTTTGTAGAAGTCTATGTTGCAGTGGACGAACCACATGAGCGCCAGCACACTTCAC
TGCTTGAAC---------AGCACAATTCGAAGGCATCTATCAGATTGCTATAAAATGAGTAACGTCGGTACTATAGACCA
TCTGCAGTGGAATGCCCGTCAGTTT-CTCAGTTGTCGACT-TCTAAGCTCTCTGATTAGCTTGATGATGGGTGTACATTT
C-------TGGACTGTAAGCTGTCAAGCTTAATGGAGCCCGGCAGTCCGTAATGCAACACAAAGAGAAGTCGCCAAAGTT
AATAGTCGAACCTGTCA---------------------------------------------------------------
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>chrUn_896
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--------------------------CGTCTAGAACGCGCGGTAGGTTTTTGCGACGGTAAAATTATTGTATGTACGGGC
AATCCAACGGCCC--------CGG-TTTTACCAAAGTGCAATCGCTTCTCTCCAACCCTGCCGCCCGAAGGCTGCAGCCA
TGCGGCGGCACTACGCCGAGCTCTTCCGCCGCGCCGCCTCGCTGCCGTCTCTCTCGCTGGTGGCCTCCCTCCACGGCGCC
GCACTCCGCCGAGGCGCGGTCCTCGTCCCCTCGCTCATCCATGCCTACTCCGCGTGCGGCGACCCAGCCTCCGCCCGCAG
CGTGTTCGACGGATTGCCCGCACAGGAGCAGACGCTCTCCGCGCGCACCGCGCTGGCCAGCGCGATGTCCGCGCACGGCA
GGTGCCGGGAGGTGCTCGGCCTGTTCCGCGGACGGGAGGGGGAGATGGACGACAAGGCGGTGACGGTGGTCCTTGCCGCG
TGCGCTAGCGATGAGGATCCTCTGACGTACGGCAGCCTGCCGTTCCGTCACTGACATGTGGGCCCGTTGGGAGCCTGGTC
CACATGTCAGTGGCCCAACGGCACGTAACGCACGGCAGAGGAGCGTCTTCCGTGTGCTAGGGCCGGGATGGTCAGTGAGG
GGAGGGAAGTCTTCGCGAGGGTCAGGAGGCCAGCGTTGCAGCACTACACGTGCATGGTGGAGATGCTCGGACGTGCTGGG
GAGGTCGAGGAGGCAGAGGGGCTGCTCGCGCGGATGGAGGCACGGCCAGACAGGATCATCTGCACGGTGCTGCTCGCTGC
GTGCCGGGCGCATGGCCGTGTCGATGTGGCTGAGAGAGTGGCTAGGTTGATGAGCGAGTATGGCATTGTGTGAATTTTGG
CATATTGATCTGTTGACAAACTGGCCATTGTGTGAGGCTGTTAGCC-AAGACCAGTGATCAAAACCATTGTGATATGGAG
CTGATAACACATAGTTTGATTGACGGCAA--------TGGTGGTTCATGAAGTTCATGCAGTAATGCAGTATACAACACA
AGCACCTGGCCGGTGAGATCTGAATTTTGTAGAAGTCTATGCTGCAGTGGACGGACCACATGAGCGCCAGCACACTTCAC
TGCTTGAACCTGTATGGAAGCACAGTTCGAAGGCACCTATCAGATTGCTATAAAATGGGTAACGCCGGTACTATAGACCA
TCTGTAGTGGAATGCCCGTCAGTTTTCTCAGTTGCTGACTGTCTAAGCTCTCTGAGTAGCTTGATGATGGGCGTACATTT
CTCATTTCTGGACTGTAAGTTGTCAAGCTTAATGGAGCCTGGCAGCCCGTAATGCAACACAAAGAGAAGTCGCCAAAGTT
AATAGCCGAACTTGTCAATATTGTTAATAGCCGTAACTGTCAATCTTGACTTCTTGAGTGAATTGTTGAGGAGCAGTTTC
GATCAAACTGTCAATCTTGACTTCTTGAGTGAATTGTTGAGGAGCAGTTTCGATCAAATTTTGTTGAAGCTGGATGTGGT
GGGAACTATCAAAATACAGGAAGTCTGCTCCAAGAACCTGTTGTGAGATCTTCTAGGATTCAGTTTTCGGATACTTCATA
GTTCTGGCATTCTCTCACGGTGGAAACTGTACCTCCTGCTATG-TTTCAATTTACTGAGCATAGATCATCTGTTTTAAAT
GGTTAGTCCCTTCACTATTGTGTCCACTGTCACAGCAATCAACGGATCTTATTCTGGACATATGTGCAATGACGCTTGAG
CAAATCAGCTCTCTGATATAAATACTCACGTTGACGCAAAACGTCCATCTCGCATGCGACACATGGGTGCGAGGGAATGC
GGAGTTGGGTATTGCTGGTAAGAGACAGAACAAGTGCAACCTGGTTGGGAAACTAGCAGGAGAGATGAGGAAGCGGTTGT
TCTGGTCACGAGCACAGCTGAGCTCGTTATCTGGGCAGCTCGGCTCTTCATTGGGATGCGGTGCATTCAATTCCTGTGCC
AGTGCGTTGATCGTTTTTAAAGGAGGAAATGTGGAAATACAGTAGATGGGTACGACGTACGTAGGTCTAGTTACGGAGCG
GACGTTTGCTGCCGTGATGGATCTAAAGGAGAGCCGTGGCTCGTGACATCAGTCCCGTCCTGATCCGTGGATCAGGATGC
ATGCTTTCCAGTAGGGCGGTAGTAGAGTAGTAAATGAGGGATGGCACCAAGACGGAGTTGCCTCCAATCTCTACCTGCCC
TGTTTG
>chrUn_1378
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---GGGAAGTCTTCGCGAGGGTCAGGAGGCCAGCGTTGCAGCACTACACGTGCATGGTGGAGATGCTCGGACGTGCTGGG
GAGGTCGAGGAGGCAGAGGGGCTGCTCGCGCGGATGGAGGCACGGCCAGACAGGATCATCTGCACGGTGCTGCTCGCTGC
GTGCCGGGCGCATGGCCGTGTCGATGTGGCTGAGAGAGTGGCTAGGTTGATGAGCGAGTATGGCATTGTGTGAATTTTGG
CATATTGATCTGTTGACAAACTGGCCATTGTGTGAGGCTGTTAGCC-AAGACCAGTGATCAAAACCATTGTGATATGGAG
CTGATAACACATAGTTTGATTGACGGCAA--------TGGTGGTTCATGAAGTTCATGCAGTAATGCAGTATACAACACA
AGCACCTGGCCGGTGAGATCTGAATTTTGTAGAAGTCTATGCTGCAGTGGACGGACCACATGAGCGCCAGCACACTTCAC
TGCTTGAACCTGTATGGAAGCACAGTTCGAAGGCACCTATCAGATTGCTATAAAATGGGTAACGCCGGTACTATAGACCA
TCTGTAGTGGAATGCCCGTCAGTTTTCTCAGTTGCTGACTGTCTAAGCTCTCTGAGTAGCTTGATGATGGGCGTACATTT
CTCATTTCTGGACTGTAAGTTGTCAAGCTTAATGGAGCCTGGCAGCCCGTAATGCAACACAAAGAGAAGTCGCCAAAGTT
AATAGCCGAACTTGTCAATATTGTTAATAGCCGTAACTGTCAATCTTGACTTCTTGAGTGAATTGTTGAGGAGCAGTTTC
GATCAAACTGTCAATCTTGACTTCTTGAGTGAATTGTTGAGGAGCAGTTTCGATCAAATTTTGTTGAAGCTGGATGTGGT
GGGAACTATCAAAATACAGGAAGTCTGCTCCAAGAACCTGTTGTGAGATCTTCTAGGATTCAGTTTTCGGATACTTCATA
GTTCTGGCATTCTCTCACGGTGGAAACTGTACCTCCTGCTATG-TTTCAATTTACTGAGCATAGATCATCTGTTTTAAAT
GGTTAGTCCCTTCACTATTGTGTCCACTGTCACAGCAATCAACGGATCTTATTCTGGACATATGTGCAATGACGCTTGAG
CAAATCAGCTCTCTGATATAAATACTCACGTTGACGCAAAACGTCCATCTCGCATGCGACACATGGGTGCGAGGGAATGC
GGAGTTGGGTATTGCTGGTAAGAGACAGAACAAGTGCAACCTGGTTGGGAAACTAGCAGGAGAGATGAGGAAGCGGTTGT
TCTGGTCACGAGCACAGCTGAGCTCGTTATCTGGGCAGCTCGGCTCTTCATTGGGATGCGGTGCATTCAATTCCTGTGCC
AGTGCGTTGATCGTTTTTAAAGGAGGAAATGTGGAAATACAGTAGATGGGTACGACGTACGTAGGTCTAGTTACGGAGCG
GACGTTTGCTGCCGTGATGGATCTAAAGGAGAGCCGTGGCTCGTGACATCAGTCCCGTCCTGATCCGTGGATCAGGATGC
ATGCTTTCCAGTAGGGCGGTAGTAGAGTAGTAAATGAGGGATGGCACCAAGACGGAGTTGCCTCCAATCTCTACCTGCCC
TGTTTG
>SNPs
--------------SSS---------------------------------------------------------S-----
-------------------------S-----S------------------------------------------------
------------S-S----S-----SSS-------------------------------S--------------------
----------------------------S----------------S----------------------------------
-------------S---------S--------------------S---------SS----S-------S-----------
-------------------------S--------------------------S----------------SS--S------
------S-----------------------S---S------S--------------------------------------
-------------S-----------------------SS------------------------------S----------
-------------------------------S--------------S--------S-------------SS---------
----S------------S-S----S-S---S-S-------------------S--SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
-----------------------------------------------------------------------S-----S--
--------------------S---S------------------S------------------------------------
-------------------------------S--------------------------S---------------------
-----S--------------------------------------------------------------------------
---------------------------------S-----------------------------S----------------
--------------S----------------SS-----------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S----S----
-------------S--------SS-------------------------------------------S-----S------
-----------------------------------------S--S--------------------------------S--
--------S-----------------------------------------------------------------------
---------------------------------------------------S----------------------------
-----------------------------SSSSSSSS---------S---------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------S---S-------------
---------------------------------------------S----------------S-----------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
------S------------------------------S---------------S------------SS--S-------S-
------------------S------------------------S-----------S---------S-S------------
----S---S-----S----------S---------------S------------------------------SS------
-----------------S--------------------S-----------------------------------------
---------SS-------------------------S---------------S----------S---S-----S------
--------S-------S-------------------S-S-----S--S----------S---------------------
---------S---------------------------------------------------------------S------
S----------------------------------S-----------S----S--------------------------S
---S-----------S---------------S-----------------------------------S----------S-
------
>forward_173
--------------------------------------------------------------------------------
------------------------------------------------------------------------ACGCTTTG
TTGAAATGCCGAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_1516
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CGAGG
GGAGGGAAGTCTTTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_1099
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CTGCCGTCTCTCTCGCTC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_2817
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CCTGAGCTCGTTATCTGGGC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
