>input_sequence_65324
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---------------------------------------------------ATGGCGTTCCGACGCCCTCTCGCTCTCCA
CCC---------GCTCGTGATCGCCTTCGTGCTGGTCTCCTGTCTCGCCGGCACCGCCAAGGCGAAGCAGACGGGCCAGC
TGACCGTGTTCTGGGGCCGGAACGCCGGCGAGGGCACGCTGCGCGAGGCCTGCGACACGGGGCTCTACTCCACCGTCGTC
ATCTCCTTCTACAGCGTCTTCGGGCACGGCCGCTACTGGGGCGACCTCTCCGGCCACCCTCTCGCCGGCGTCGGTGCCGA
CATCAAGCACTGCCAGTCCAGGAACATCCTCGTTCTCCTCTCCATCGGCGGGCCCGGGAACGGCTACTTCCTCCCGTCCT
CGGCCTCCGCCGCAGCCGTCGCCGACAACCTCTGGAACGCGCACCTCGGCGGGCGCCGGAACGGCGTGTACCGCCCGTTC
GGCGACGCCGCCGTCGACGGCATCGACTTCTACATCGACCAGGGCGCCC---CCGACCACTACGACGAGCTGGCCAGCCG
CCTTGAAGGGTACAACCGGTTCTATCGCGCCCGGAAGGGTGTGCGCCTGACGGCGACGCCGCGGTGCGGGTTGCCCGACC
CCCGCCTGGGGGCGGCGCTCCGGACGGGGCTGTTCGAGCGCATCCACGTCAGGTTCTACGGCAACGACTCATGCTCGCTG
GGGAAGGGCGGGACGTACGGTGTGGTAGGGCAGTGGGAGAAGTGGACGGCGGCGTTCCCGAGGACACAGGTGTACCTGGG
CCTCGCGCCAGCGGAGAGCGGCGTGCCGGAGGGGGCGCAGGGCACCGTCGCCGTTTACCTCAAGTACCTCTACTACGACC
TGCTGCCCATGGTGCAGAAGGCGAACAACTATGGCGGGGTCATGGTCTGGGACAGGTTCACCGACAAGAAGACACGCTGG
AGCAGCGTTGTCAATGGATGGGCCTGA-----------------------------------------------------
--------------------------------------------------------------------------------
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----------
>chr1B_1_TraesCS1B01G065000
CCTTGGCGCATCAG--TCTAATTTTTATCTAGCTTTTTTTTTAAAAAAAACTATTGTATCTAGCTTTAGGATGTGTCTTT
TAATCTTTGACTGGGCTCGTACCTCAGCATACAAGAGCAC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CTTCAACCAGGAGCTATGTACTCCCTCCGTCCGGGTTTATTGGGCTTCTTAGCAAGTT
TGCTCTGATCTGTTTTTGTAAGGCCCCGCTAAATATGCGTGTTTACTTTCCTCGATCAGCTCCGCCGAGCACGCACACGA
TTGGGCTGCCGTTTCGGCTTCATCGCTGCATGCGGGAAAACAGCAAAGTACCAGCTGTGAGCAATAACTGCCTCGCGCTG
TGGTTGGTTGCATGCGAAAGTAAAGCTGGGCAATTAGCTACTGTGAGGCTTTGGAATAACTGCAGATTAATCTAATTGGC
TGCTGCTACTTTCATAAGTCACGGATGGTTACCAGTAATATTCTTCCTTGGTCCTCGTGCCGTGGCTAACAGACCCAATA
AACCTGGACGGAGGGAGTAGCCACTAAGCGGAAAGTTTTGCTAGGTCCACCTTTTAGCGGAGGCTATAGCCTACATGTTC
ATGCATGTAC----GAGTCTTGCATCTGGTTTATGACCAAAGGAACACGCGCAGTGACATTTTCTACTTAGCTAGCTGTC
CTGAACTGCACCTTCAAACAATAAAGCCACCCCTTGT------ATACACATACAGCCATCCATGGATGACGACGGCGACG
AGCTATG---GATCGATAACAGTCATGCCCATGCATGCATATGCATTCGCTGTGCACGCTCACTTC---CCCCTGTTTCT
TCATCCTGAAAAGTCGAGCTCCCTGTTTTCCCATGCATTCCGCG-------GCGCACAAGAAAACACACATCACCTACTC
CTACCTTAGCTGCAT----CTATATATGAGCTCGTGTGCCAAAACAAACCCTATATATAGACCTCCCCAACGCCTTCAAG
TTCCTACACCATGACACAACATCCAGAACCATCTCACTGCAAACCTCCGCAATGGCGTTCCGACGCCCTCTCGCTCTCCA
CCC---------GCTCGTGATCGCCTTCGTGCTGGTCTCCTGTCTCGCCGGCACCGCCAAGGCGAAGCAGACGGGCCAGC
TGACCGTGTTCTGGGGCCGGAACGCCGGCGAGGGCACGCTGCGCGAGGCCTGCGACACGGGGCTCTACTCCACCGTCGTC
ATCTCCTTCTACAGCGTCTTCGGGCACGGCCGCTACTGGGGCGACCTCTCCGGCCACCCTCTCGCCGGCGTCGGTGCCGA
CATCAAGCACTGCCAGTCCAGGAACATCCTCGTTCTCCTCTCCATCGGCGGGCCCGGGAACGGCTACTTCCTCCCGTCCT
CGGCCTCCGCCGCAGCCGTCGCCGACAACCTCTGGAACGCGCACCTCGGCGGGCGCCGGAACGGCGTGTACCGCCCGTTC
GGCGACGCCGCCGTCGACGGCATCGACTTCTACATCGACCAGGGCGCCC---CCGACCACTACGACGAGCTGGCCAGCCG
CCTTGAAGGGTACAACCGGTTCTATCGCGCCCGGAAGGGTGTGCGCCTGACGGCGACGCCGCGGTGCGGGTTGCCCGACC
CCCGCCTGGGGGCGGCGCTCCGGACGGGGCTGTTCGAGCGCATCCACGTCAGGTTCTACGGCAACGACTCATGCTCGCTG
GGGAAGGGCGGGACGTACGGTGTGGTAGGGCAGTGGGAGAAGTGGACGGCGGCGTTCCCGAGGACACAGGTGTACCTGGG
CCTCGCGCCAGCGGAGAGCGGCGTGCCGGAGGGGGCGCAGGGCACCGTCGCCGTTTACCTCAAGTACCTCTACTACGACC
TGCTGCCCATGGTGCAGAAGGCGAACAACTATGGCGGGGTCATGGTCTGGGACAGGTTCACCGACAAGAAGACACGCTGG
AGCAGCGTTGTCAATGGATGGGCCTGATCGTATATATCGCT----GGTTTACAGCTACGGATCGGAGTGTATACTA---C
TACTGTGTATGCGTGTGTACGAATAAAACGGCATCTATATCTTTACCTAATCTTTATCTTTACCTACTAACTAGTACAAA
TGTCCGTGCGTTGCACCGGGCG-AAAAAGGCACAACCTGCTTCATATGCCATTGTGCATCA-TTTTTATATTC-AATTTA
ATAAACAACAATAA-AAGGTTAAACATGGAACTTTTT-ATTTTTAACAAAAGTTAACATTTTCATAAAAATTGGAACACT
TATTTAAGATTAGTTAATGTTTTTATT---------------------------------------------AAAGAACA
TTTTTTGAATTGATGTTTTCTTTT--AAGAATGTTTTTTT----------CATTTGTAAATGGGGAAAATAGT----AAA
AATGGAACTTTGCTTTTGGAAAAAAAATTAAGCTCTTTTAGAAAGTGCGAACATATTGTTTTGAAACAAAAAATTTGTGA
AGATATG-AAAACTGTGAAGATTTTTGAACTTGTTTTTAGGGC---ATTTTTTTACATCTTCACAGTTGACTTAGATAG-
--------------------------------------------------------------------------------
------------------------AAGGAAGCACAAACTCATCTTCCTTATCGT-CCCCATTCTCAAGTCTCCTTTGTCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTA
AAATTGATGTTGATAAACTGTTTCGTCAAAGCAACATATATGACCATGGATGTGAATGAAAACATTAAAAGGAAACGATA
CTACTTTTTTGCAGAATAATACACACCACCGCAATCAGGGAAGTCCAGTTAACGATTTGCATTGAAACTGAAGCCATTAT
TGAATAGAGC
>chr1B_1
CCTTGGCGCATCGTATTCTAATTTTTATCTAGCTTTTA-TTTAAAGAAAACTATTGTATCTAGCTTTAGGATGTATCTTA
-AATCTTTGACTGGGCTCGTACCTCAGCATACAAGAGCAAGGCGAATCAACCTGTGGTTGGATGGTTAGAGGGATTGTGG
TATCCCCAGCCCACCAGAGTTCAAATCCTGGTGCTCGCATTTATTCCTGGATTTATTTCAGGAGTTCCGGCGATGCGCGT
TCAGTGGGAGGAGACGTTTCCGTCGACGACGAGGTGCCTACGGTGACTTCGTAAATTTCATGATGATATGCAGGCTCAGT
CTTTCGAAGGTGCTTATAGGGGTAGGGTGTGCGTGTGTGCGTTCATAGGGATGAGTGTATACACGTATATATGAGCGCTT
GCGTCTGTACTGATGTAGCCAACTTCAACCAGGAGCTATGTAGCCA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------ACTAACCGGAAAGTTTTGCTAGGTCCACCTTTTAGCAGAGGCTATGGCCTACATGTTC
ATGCATGTAC----GAGTCTTGCATCTGGTTTATGACCAAAGGAACACGCGCTGTGACATTTTCTACTTAGCTAGCTGTC
CTGCACTGCACCTTCAAACAATAAAGCCACCCCTTGT------ATACACCTACAGCCATCCATGGATGACGACGGCGACG
AGCTCTG---AATCGATAACAGTCATGC---------------------------ACGTTCACTTC---CCCTTGTTTGT
TCGTCCTGAAAAGTCGAGCTCCCTGTTTTCCCATGCATTCCACG-------GCGCACAAGAAAACACACATCACCTACTC
CTACCTTGGCTGCAT----CTATCTGTGAGCTCGTGTGCCAAAACAAACCCTATATATAGACCTCCCCAACGGCTTCAAG
TTCCTACACCATCACACAACATCCAGAACCATCTCACTGCAAACCTCCGCCATGGCGTTCCGACGCCCTCTCGCTCTCCA
CCC---------GCTCGTGATCGCCTTCGTGCTGGTCTCCTGTCTCGCGGGCGCCGCCACGGCGAAGCAGACGGGCCAGC
TGACCGTGTTCTGGGGCCGGAACGCCGGCGAGGGCACGCTGCGCGAGGCCTGCGACACGGGGCTCTACTCCACCGTCGTC
ATCTCCTTCTACAGCGTCTTCGGGCACGGCCGCTACTGGGGCGACCTCTCCGGCCACCCTCTCGCCGGCGTCGGTGCCGA
CATCAAGCACTGCCAGTCCAGGAACATCCTCGTTCTCCTCTCCATCGGCGGGCCCAGGAACGGCTACTCCCTCCCGTCCT
CGGCCTCCGCCACCGCCGTCGCCGACAACCTCTGGAACGCGCACCTCGGCGGGCGCCGGAACGGCGTGTACCGCCCGTTC
GGCGACGCCGCTGTCGACGGCATCGACTTCTACATCGACCAGGGCGCCC---CCGACCACTACGACGAGCTGGCCAGCCG
CCTTGACGGGCACAACCGGTTCTACCGCGGCCGGAAGGGTGTGCGCCTGACGGCGACGCCGCGGTGCGGGTTGCCCGACC
CCCGCCTGGGGGCGGCGCTCCGGACGGGGCTGTTCGAGCGCATCCACGTCAGGTTCTACGGCAACGACTCATGCTCGCTG
GGGAAGGGCGGGACGTACGGCGTGGTAGAGCAGTGGGAGAAGTGGACGGCGGCGTTCCCGAGGACGCTGGTGTACCTGGG
CCTCGCGCCGGCGGAGAGCGGCGTGCCGGAGGGGGCGCAGGGCACCGTCGCCGTTTACCTCAAGTACCTCTACTACGACC
TGCTGCCCAAGGTGCAGAAGGCGAACAACTATGGCGGGGTCATGGTCTGGGACAGGTTCACCGACAAGAAGACACGCTGG
AGCAGCGTCGTCAGTGGATGGGCCTGATCGTGTATATCGCT----GGTTCA-------------GAGTGTATACTA---C
TACTGTGTATGCGTGTGTACGAATAAAACGGCATCCATAT----------------------------------------
--------------------------------------------------------------------------------
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----------
>chr2A_1
CCTTGGCGCATCATATTCTAATTTTTATCTAGCTTTAAAG----AAAAATCTATTGTATCTAGCTTTAGGATGTGTCTTT
CAATCTTTGACTGGGCTCGTACCTCAGCATACAAGAGCAC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CTTCAACCAGGAGCTATGTAGCTA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------ACTAACCGGAAAATTTTGCTAGCTCCACCTTTTAGCAGAGGCTATAGCCTACATGTTC
ATGCATGTAC----GAGTCTTGCATCTGGTTTATGACCAAAGGAACATGCACTGT-------------------------
-------------------AATAAAGCCGCCCATTGTAATTGTATACACCTACAGCCATCCACGGATGACGACGGCGACG
AGCTCTTCCAGATCGATAACAGTCATGCCCATGCATGCATATGCATTCGCTCTGCACGTTCACTTGC----CCTGTTTCT
TCATCCTGAAAAGTCGAGCTCCCTGTTTTCCCATGCATTCCACTGCGCGGCGCACACAGGAAAACACACTTGACCTACTC
CTACCTTCGCTGCAT----CTATCTGTGAGCTCGTGCGCCAAAACAAACCCTATATATAGACCTCCCCAACGCCTTCAAG
TTCCTACACCATCACACAATATCCAGAACCATCTCACTGCCAACCTCCGCCATGGCGTTCCGACGCCCTCTCGCTCTCCA
CCC---------GCTCGTGATCGCCTTCGTGCTGGTCTCCTGTCTCGCCGGCGCCGCCACGGCGAAGCAGACGGGCCAGC
TGACCGTGTTCTGGGGCCGGAACGCCGGCGAGGGCACGCTGCGCGAGGCCTGCGACACGGGGCTCTACTCCACCGTCGTC
ATCTCCTTCTACAGCGTCTTCGGGCACGGCCGCTACTGGGGCGACCTCTCTGGCCACCCTCTCGCCGGCGTCGGTGCCGA
CATCAAGCACTGCCAGTCCACGAACATCCTCGTCCTCCTCTCCATCGGCGGGCCCGGGAACGGCTACTCCCTCCCGTCCT
CCGCCTCCGCCGCAGCCGTCGCCGACAACCTCTGGAACGCGCACCTCGGCGGGCGCCGGAACGGCGTGTACCGCCCGTTC
GGCGACGCCGCCGTCGACGGCATCGACTTCTACATCGACCAGGGCGCCC---CCGACCACTACGACGAGCTGGCCAGCCG
CCTCGACGGGTACAACCGGTTCTACCGCGGCCGGAAGGGTGTGCGCCTGACGGCGACGCCGCGGTGCGGGTTGCCCGACC
GCCGCCTGGGGGCGGCGCTCCGGACGGGGCTGTTCGAGCGCATCCACGTCAGGTTCTACGGCAATGACACATGCTCGCTG
GGGAAGGGCGGGACGTACGGCGTGGTAGAGCAGTGGGAGAAGTGGACGGCGGCGTTCCCAAGGACCCAGGTGTACCTGGG
CCTCGCGCCGGCGGAGAGCGGCGTGCCGGAGGGGGCGCAGGGCACCGTCGCCGTTTACCTCAAGTACCTCTACTACGACC
TGCTGCCCAAGGTGCAGAAGGCGAACAACTATGGCGGGGTCATGGTCTGGGACAGATTCGCCGACAAGAAGACACGCTGG
AGCAGCGTCGTCAACGGATGGGCCTGATCGTTTATATCGCTAGCTGGTTTACAGCTACGGATCCGAGTATATACTACTTC
TACTGTGTATGCGTGTGTATGAATAAAACGGCATCCATAT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------
>chr2D_513
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------GTAGCTA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------ACTAACCGGAAAATTTGTCTAGCTCCACCTTTTAGCAGAGGCTATAGCCTACATGTTC
ATGCATGTACACTGGAGTCTTGCATCTGGTTTATGACCAAAGGAACACGCACTGTAACATTTTCTACTTAGCTAGCCGTC
CTGCACTGCACCTTCAGACAATAAAGCCACCCATTGTAATTGTATACACCTACAGCCATCCACGGATGACGACGGCGACG
AGCTCTTCTAGATCGATAACAGTCATGCCC----------ATGCATTCGCTCTGCACGTTCACTTGCTTCCCCTGTTTCT
TCATCCTGAAAAGTCGAGCTCCCTGTTTTCCCATGCATTCCA-----CGGCGCACACAGGAAAACACACTTGACCTACTC
CTACCTTAGCTGCATCTATCTATCTGTGCGCTCGTGTGCCAAAACAAACCCTATATATAGACCTCCCCAACGCCTTCAAG
TTCCTACACCATCACACAATATCCAGAACCATCTCACTGT----------CATGGCGTTCCGACGCCCTCTCGCATTCCA
CCATGAGTGCATGCTCGTGATCGCCTTCGTGCTGGTCTCCTGTCTCGCCGGCGCCGCCACGGCGAAGCAGACGGGCCAGC
TGACCGTGTTCTGGGGCCGGAACGCCGGCGAGGGCACGCTGCGCGAGGCCTGCGACACGGGGCTCTACTCCACCGTCGTC
ATCTCCTTCTACAGCGTCTTCGGGCACGGCCGCTACTGGGGCGACCTCTCCGGCCACCCTCTCGCCGGCGTCGGTGCCGA
CATCAAGCACTGCCAGTCCAGGAACATCCTCGTCCTCCTCTCCATCGGCGGGCCCGGGAACGGCTACTCCCTCCCGTCCT
CCGCCTCCGCCGCAGCCGTCGCCGACAACCTCTGGAACGCGCACCTCGGCGGGCGCCGGAACGGCGTGTACCGCCCGTTC
GGCGACGCCGCCGTCGACGGCATCGACTTCTACATCGACCAGGGCGCCC---CCGACCACTACGACGAGCTGGCCAGCCG
CCTTGACGGGTACAACCGGTTCTACCGCGGCCGGAAGGGTGTGCGCCTGACGGCCACGCCGCGGTGCGGGTTGCCCGACC
GCCGCCTGGGGGCGGCGCTCCGGACGGGGCTGTTCGAGCGCATCCACGTCAGGTTCTACGGCAACGACACATGCTCGCTG
GGGAAGGGCGGCACGTACGGCGTGGTAGGGCAGTGGGAGAAGTGGACGGCGGCGTTCCCGAGGACGCAGGTGTACCTGGG
CCTCGCGCCGGCGGAGAGTGGCGTGCCGGAGGGGGCGCAGGGCACCGTCGCCGTTTACCTCAAGTACCTGTACTACGACC
TGCTGCCCAAGGTGCAGAAGGCCAACAACTATGGCGGGGTCATGGTCTGGGACAGGTTCGCCGACAAGAAGACACGCTGG
AGCAGCGTCGTCAGCGGATGGGCCTGATCGTTTATATCGCT----GGTTTACAGCTACGGATCGGAGTACATACTACTCC
TACTGTGTATGCGTGTGTATGAATAAAACGGCATCCATAT----------------------------------------
--------------------------------------------------------------------------------
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----------
>chr5A_1089
--------------------------------------------------------------------------------
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--------------------------------------------------------------------AGACCGGCCAGC
TCACCGTCTTTTGGGGCCGGAACAAGGACGAGGGCTCTCTCAGGGAAGCCTGCGACGCCGGCCTCTACACCGCGGTCATC
ATGTCCTTCCTCAACGTCTACGGCCACGGCAAGTACCGCCTCGACCTCTCCGGCCACCCGCTCGCCGGCATCGGGGGCGA
CATCAGGCACTGCCAGTCCATGGGCATCACCGTCTCCCTCTCCATCGGCGGCTACGGCGGCGACTACGCGCTCCCGACCA
ACCGGTCCGCGCTCGACCTCGCCGACCACCTCTGGTTCTCCTACCTCGGCGGCAGGCGCAGGGGCGTGCGCCGCCCGTTC
GGCCGCGCGAGTCTCGACGGCGTCGACCTCTTCCTGGAGCGCGGCGGGCCGGCGGAGCACTACGACGCGCTGGCGAGGGA
GCTGGCCAGGCGCAAGGC------CCGCGGGGGGAAGGCGCCGCGGCTGACGGCGACGCCGCGCTACGCGTTCCCGGACC
GGCTCGCGGCGCCGGCGCTCTCGACGGGGGTCTTCGAGCGCATCCACGTCAGGTTCTACG--------------------
--------------------------------------------------------------------------------
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----------
>chr5B_1089
--------------------------------------------------------------------------------
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--------------------------------------------------------------------AGACCGGCCAGC
TCACCGTCTTCTGGGGCCGGAACAAGGACGAGGGCTCTCTCAGGGAAGCCTGCGACACCGGCCTCTACACCGCGGTCATC
ATGTCCTTCCTCAACGTCTACGGCCACGGCAAGTACCGCCTCGACCTCTCCGGCCACCCGCTCGCCGGCATCGGGGACGA
CATCAGGCACTGCCAGTCCATGGGCATCACCGTTTCCCTCTCGATCGGCGGCTTCGGCGGCGACTACGCGCTCCCGACCA
ACCGATCCGCGCTCGACCTCGCCGACCACCTCTGGTTCTCCTACCTCGGCGGCAGACGCAGGGGCGTGCGCCGCCCGTTC
GGCCGCACGCGGCTCGACGGCGTCGACCTCTTCCTGGAGCGCGGCCGGCCGGCGGAGCACTACGACGCGCTGGCCAGGGA
GCTGGCCAGGCGCAAGGC------CCGCGGGGGGAAGGCGCCGCGGCTGACGGCGACCCCACGCTACGCGTTCCCGGACC
GGCTCGCGGCGCCGGCGCTCTCGACGGGGGTCTTCGAGCGCATCCACGTCAGGTTCTACG--------------------
--------------------------------------------------------------------------------
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----------
>chr1B_2040
--------------------------------------------------------------------------------
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---------------------------------------------------------------------ACTAGTACAAA
TGCCCGTGCGTTGCACCGGGCG-AAAAAGGCACAACCTGCTTCATATGCCATTGTGCATCA-TTTTTATATTCAATTTTA
ATAAACAACAATAA-AAGGTTAAACATGGAACTTTTTTATTTTTAACAAAAGTTAACATTTTCATAAAAATTGGAACACT
TATTTAAGATTAGTTAATGTTTTTATT---------------------------------------------AAAGAACA
TTTTTTGAATTGATGTTTTCTTTT--AAGAATGTTTTTTT----------CATTTGTAAATGGGGAAAATAGT----AAA
AATGGAACTTTGCTTTTGG-AAAAAAATTAAGCTCTTTTAGAAAGTGCGAACATATTGTTTTGAAACAAAAAATTTGTGA
AGATATG-AAAACTGTGAAGATTTTTAAACTTGTTTTTAGGGC---ATTTTTTTACATCTTCACAGTTGACTTAGATAG-
--------------------------------------------------------------------------------
------------------------AAGGAAGCACAAACTCATCTTCCTTATCGT-CCCCATTCTCAAGTCTCCTTTGTCG
AAGTGCTCTATGCCGCTGCAACCACACCC---------------------------------------------------
-----------------------------------------------------------CCCTTTGGTGCCCTATCCGCT
GCGTTCGCCTTGTCCATCACGAGCCCTGCCAG---------------------------------------------CTA
CAATTGATGTTGATAAACTGTTTCGTCAAAGCAACATATATGACCATGGATGTGAATGAAAACATTAAAAGGCGACGATA
CTACTTTTTTGCAGAATAATACACACCACCGCAATCAGGGAAGTCCAGTTAACGATTTGCATTGAAACTGAAGCCATTAT
TGAATAGAGC
>chr2A_2040
--------------------------------------------------------------------------------
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---------------------------------------------------------------------ACTAGTACAAA
TGCCCGTGCGTTGCACCGGGTG-AAAAAGACACAACCTGCTTCATATGCCATTGTGCATCA-TTTTTATATTCAATTTTA
ATAAACAACAATAA-AAGGTTAAACATGGAACTTTTTTATTTTTAACAAAAGTTAACATTTTCATAAAAATTGGAACACT
TATTTAAGATTAGTTAATGTTTTTATT---------------------------------------------AAAGAACA
TTTTTTGAATTGATGTTTTCTTTT--AAGAATGTTTTTTT----------CATTTGTAAATGGGGAAAATAGT----AAA
AATGGAACTTTGCTTTTGG-AAAAAAATTAAGCTCTTTTAGAAAGTGTGAACATATTGTTTTGAAACAAAAAATTTGTGA
AGATATG-AAAACTGTGAAGATTTTTAAACTTGTTTTTAGGGC---ATTTTT-TACATCTTCACAGTTGACTTAGATAG-
--------------------------------------------------------------------------------
------------------------AAGGAAGCACAAACTCATCTTCCTTATAGT-CCCCATTCTCAAGTCTCCTTTGTTG
AAGTGCTCTATGCCGCTGCAACCACACCC---------------------------------------------------
-----------------------------------------------------------CCCTTTGGTGCCCTATCCGCT
GCGTTCGCCTTGTCCATCACGAGCCCTGCCAG---------------------------------------------CTA
CAATTGATGTTGATAAACTGTTTCGTCAAAGCAACATATATGACCATGGATGTGAATGAAAACATTAAAAGGCGACGATA
CTACTTTTTTGCAGAATAATACACACCACCGCAATCAGGGAAGTCCAGTTAACGATTTGCATTGAAACTGAAGCCATTAT
TGAATAGAGC
>chr6B_2040
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------ACTAGTACAAA
TGCCCGTGCGTTGCACCGGGTG-AAAAAGGCACAACCTGCTTCATATGCCATTGTGCATCA-TTTTTATATTCAATTTTA
ATAAACAACAATAA-AAGGTTAAACATGGAACTTTCTTATTTTTAACAAAAGTTAACATTTTCATAAAAATTGGAACACT
TATTTAAGATTAGTTAATGTTTTTATT---------------------------------------------AAAGAACA
TTTTTTGAATTGATGTTTTCTTTT--AAGAATGTTTTTTT----------CATTTGTAAATGGGGAAAATAGT----AAA
AATGGAACTTTGCTTTTGGAAAAAAAATTAAGCTCTTTTAGAAAGTGCGAACATATTGTTTTGAAACAAAAAATTTCTGA
AGATATG-AAAACTGTGAAGATTTTTAAACTTATTTTTAGGGC---ATTTTTTTACATCTTCACAGTTGACTTAGATAG-
--------------------------------------------------------------------------------
------------------------AAGGAAGCACAAACTCATCTTCCTTATCGT-CCCCATTCTCAAGTCTCCTTTGTCG
AAGTGCTCTATGCCGCTGCAACCACACCC---------------------------------------------------
-----------------------------------------------------------CCCTTTGGTGCCCTATCCGCT
GCGTTCGCCTTGTCCATCACGAGCCCTGCCAG---------------------------------------------CTA
CAATTGCTGTTGATAAACTGTTTCGTCAAAGCAACATATATGACCATGGATGTGAATGAAAACATTAAAAGGCGACGATA
CTACTTTTTTGCAGAATAATACACACCACCGCAATCAGGGAAGTCCAGTTAACGATTTGCATTGAAACTGAAGCCATTAT
TGAATAGAGC
>chr7A_2040
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------ACTAGTACAAA
TGCCCGTGCGTTGCACCGGGCG-AAAAAGGCACAACCTACTTCATATGCCATTGTGCATCA-TTTTTATATTCAATTTTA
ATAAACAACAATAA-AAGGTTAAACATGGAACTTTTTTATTTTTAACAAAAGTTAACATTTTCATAAAAATTGGAACACT
TATTTAAGATTAGTTAATGTTTTTATT---------------------------------------------AAAGAACA
TTTTTTGAATTGATGTTTTCTTTT--AAGAATGTTTTTTT----------CATTTGTAAATGGGGAAAATAGT----AAA
AATGGAACTTTGCTTTTGG-AAAAAAATTAAGCTCTTTTAGAAAGTGCGAACATATTGTTTTGAAACAAAAAATTTGTGA
AGATATG-AAAACTGTGAAGATTTTTAAACTTGTTTTTAGGGC---ATTTTTTTACATCTTCATAGTTGACTTAGATAG-
--------------------------------------------------------------------------------
------------------------AAGGAAGCACAAACTCATCTTCCTTATCGT-CCCCATTCTCAAGTCTCCTTTGTCG
AAGTGCTCTATGCCGCTGCAACCACACCC---------------------------------------------------
-----------------------------------------------------------CCCTTTGGTGCCCTATCCGCT
GCGTTCGCCTTGTCCATCACGAGCCCTGCCAG---------------------------------------------CTA
CAATTGATGTTGATAAACTGTTTCGTCAAAGCAACATATATGACCATGGATGTGAATGAAAACATTAAAAGGCGACGATA
CTACTTTTTTGCAGAATAATACACACCACCGCAATCAGGGAAGTCCAGTTAACGATTTGTATTGAAACTGAAGCCATTAT
TGAATAGAGC
>chr1D_2040
--------------------------------------------------------------------------------
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---------------------------------------------------------------------ACTAGTACAAA
TGCCCGTGCGTTGCACCGGGCAAAAAAAGGCACAACCAGCTTCATGTGCCATTGTGCATCAGTTTTTATATCCAAATTTA
ATAAACATCCATAATAAGGTTACACGTCAAAATTCCTTATTTTAAATAAAAGTTAACATTTTCATAAAAATTGGAACACT
T-TTTAAGAGTAGTTAACGTTTTTATGAGAATTGGAACATTTCTCTAGGAAAGAACATTTTTTTTACGGAGAAAAGAACA
TTTTTTGAACAGGCGTTTTTGATGAAAAGAATGTTTTGTTTTTGGTTGTACATTTCTAGATGGACTTTGTTTTGGTAAAA
AATGGAACTTTTTTTTGGG-AATCT--TTAAGTTTTGTAAACAAATGCGAACATATT---TTCTAACAAAGACAGTGTGA
ACATATGTAAAACTGTGAACAATTTGAAGTTTTTTTATTGTGTTAAATTTTTTTACACATATTTTTTATAGCTTTTTTGT
TAGGCAATTTTTACAGATGGTTGTTTAATTGGGAAGAGTTTATTCTTTTTTAACTATCTAGGCTTGGCCCAAACAAAGCA
CTTGACGTTAACTTTTAATAAAATAAGGACGCACAAACTCATCTTGCTTATCGTTCCCCATTCTCAAGTGTCCCTTGTCG
ATGCGCCCTGCGCCGCCATCCACGTCGTGTCTACCTCCTCTGTCGAGATGGGCCTATCCCTTCCTCCTGTAGCACACCGT
AATGGAGGGTTCCCCATGGGGTTGGGAGGGGGAGGCGCCGAGGGGGGGGCGAGCAGTTGCCGTTTGGTGCCC--------
------------------------CCTACCAG---------------------------------------------CTA
CGGTCAGAGTTGATCAATTGTTTTGTCCAAACAGCATATATGACCATGGATGTGAATGAAAACATTAAAAGGCGACAATA
CTACTTTT-TGCCGAATAAT--ACGCCACCGCAATCATGGAAGTCCAGTTGACGATTTTACCTGAAACTGAAGCCATTAT
TGAATA----
>chr3A_2074
--------------------------------------------------------------------------------
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------------------------AAAAGGCACAACCTGCTTCATATGCCATTGTGCATCA-TTTTTATATTCAATTTTA
ATAAACAACAATAA-AAGGTTAAACATGGAACTTTTTTATTTTTAACAAAAGTTAACATTTTCATAAAAATTGGAACACT
TATTTAAGATTAGTTAATGTTTTTATT---------------------------------------------AAAGAACA
TTTTTTGAATTGATGTTTTCTTTT--AAGAATGTTTTTTT----------CATTTGTAAATGGGGAAAATGGT----AAA
AATGGAACTTTGCTTTTGG-AAAAAAATTAAGCTCTTTTAGAAAGTGCGAACATATTGTTTTGAAACAAAAAATTTGTGA
AGATATG-AAAACTGTGAAGATTTTTAAACTTATTTTTAGGGC---ATTTTTTTACATCTTCACAGTTGACTTAGATAG-
--------------------------------------------------------------------------------
------------------------AAGGAAGCACAAACTCATCTTCCTTATCGT-CCCCATTCTCAAGTCTCCTTTGTCG
AAGTGCTCTATGCCGCTGCAACCACACCC---------------------------------------------------
-----------------------------------------------------------CCCTTTGGTGCCCTATCCGCT
GCGTTCGCCTTGTCCATCACGAGCCCTGCCAG---------------------------------------------CTA
CAATTGATGTTGATAAACTGTTTCGTCAAAGCAACATATATGACCATGGATGTGAATGAAAACATTAAAAGGCGACGATA
CTACTTTTTTGCAGAATAATACACACCACCGCAATCAGGGAAGTCCAGTTAACGATTTGCATTGAAACTGAAGCCATTAT
TGAATAGAGC
>SNPs
-------------S-----------------------SS-----------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS-----S------------------------------S---------------------
----------------------------------------------------S---------------------------
---S---------------------------------------------S------------------------------
----S----------------------------------------------S------S---------------------
-----------------------------------------S--------------------------------------
-----------------------S-S------------------------------------------------------
------------S-------------------------------------S-----------------------------
----------------------------------------------------S------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-----------------S----S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------S--------------------------------------------S--------------
---------S----------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------S----------------------S------------------------------------------------
-----------------------------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
S-----------------------------------------------------------------------SS------
--------------------------------------------------------------------------------
----------
>forward_660
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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TGGTTGGTTGCATGCGAAAG------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2249
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------TGTCAATGGATGGGCCTGAT----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------
>forward_661
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GGTTGGTTGCATGCGAAAGT-----------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2389
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------AACTAGTACAAA
TGTCCGTGCG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
