>input_sequence_65283
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-------------------------------------------------ATGGGAAAGAAGTGCAGCACCTGCGGCAAGA
CCTACAAAACCAAACGTGCTTTTAATGGCCACAAGATGAAATGCAAGTCCCCCAAGAATCCTGAGCAAAATGCCGCAGGA
CAGGAAGAGGCTTCAAGCAGTGTTGGTGATAGGAAAGATCTGCTTAATTTTCATATAGAAAGGCGGCCACGGAGCAGCCG
GGGTGCAGCGAAGGAGATGGATGGTGGAAATGAAGTCTTTCCGTCAGAAGAGGAGATAGATGCTGCAGAGGGGCTTAGTC
TTCTCCAGTACCCACGTGGCAAGGATACATCTTTTGATAATGAACCGGAAATTGATTATTCAGGGGTTGAATCAGCTGCT
GATAATTCTGATGCGGTGCAAGAGGACAACCCGACGCAGAAGTTGTATCTTCTGTTGATTTTGGGTAAACTCATTAAGAT
AATATCTGATAGAAACTCAGCTTCTGTGGATCTCTGTGGAGGTGCTGAAAAATATGGAAATGAAGCCCTTTCGTTAGAAG
AGACGGAATTGATTCACAATGATGATG---------------------GTCAAAGGCTGGTTGATTGTCCTGAAAATTCT
GTTGTGGTTGAGCCAAAACGGCCCAAGCTTGATCTCAAGGTTTCTGACAGCAGTGACAGCCCAGCTTCTGATGGTGCTCA
AGGTGGCAACAATGATGCGTCGGGGTCTGGCACGCCGAAGCTGAAACAGACATCTCTGACGGAGCCAATGGCCACAGAGG
CGGATCGGGAACAAGAACAGAAGTCAGATGTCTTAGAGGCTCCCCTGCCTCTCGATACAACCTCTGTTGACCAATCAGGA
ACTGACAATCCAGGTGACGAATCAGCTGCTGATACTTCAGATGAGGTGCGGGATTCCATGGTGCTGCTGCAGGTCGCACA
AGGTCTCCTGGATCTAAGAAACTGCACAGATCGATGA-------------------------------------------
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>chr5D_1_TraesCS5D01G087300
GGTTCTTGCTTTTCCTGACCAATTCGATCGCCTGCCATTTTCCACAAGAAGCCTCGAAGCCTTCAGGTACAACTCTTTTA
CCATGTCTCGCTAGCTACTGCCTAGTGATTGGTAGATGAAGTTCATTTCTTCGCTGTGACCCCTTGTATGCAAGAATGCT
TGAAATACAGAAAGAAATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGTTTCAGTTCATGTATGTACCTGATGCAAT
GATCGTGTGCCAGTTCTTGGTATGTTCTCTGGAGGGAAAAGTTGTTCTCTTGCAAGAAAAGTTTGATGAGATTGAATTAA
TGTGTCTGATGCAGTAGTTGACGCAATTGATTGGATGAATTTTTGCGT-------AGTTATGTTGGTGTTATGGCCAGCA
AGTTTCTCACTTTTGCCGAGGATTTTCATCAAGCCTTATCTTTTAGTTTACTGGTTATATGGTTGTTGTTTGTTTCAAAG
AATGCCTTGCTTATACGATGCATTCTTAATTACTGAATGATTGCTGTGATTCAGAAATGGCCCTCAACACAAGATATGCA
GCATGCGTGGAAAGAATATGCCACTTCCATGAATTTCCCCAATTTTAT-ATGATTGTTGTTATTGCTAGTAGGGTGCTAT
CTGTAGGCTATCATTTAGGATATTTCCACAGTTGCTGCTTCCATGGATTTGCTTTCTTGAA-TTTTTTTCCTAAATCCAT
TGAATTTCCTATGACGTGCCCTTAACTGTAAGTGTGCTGTGTTTCAGAAATGGGAAAGAAGTGCAGCACCTGCGGCAAGA
CCTACAAAACCAAACGTGCTTTTAATGGCCACAAGATGAAATGCAAGTCCCCCAAGAATCCTGAGCAAAATGCCGCAGGA
CAGGAAGAGGCTTCAAGCAGTGTTGGTGATAGGAAAGATCTGCTTAATTTTCATATAGAAAGGCGGCCACGGAGCAGCCG
GGGTGCAGCGAAGGAGATGGATGGTGGAAATGAAGTCTTTCCGTCAGAAGAGGAGATAGATGCTGCAGAGGGGCTTAGTC
TTCTCCAGTACCCACGTGGCAAGGATACATCTTTTGATAATGAACCGGAAATTGATTATTCAGGGGTTGAATCAGCTGCT
GATAATTCTGATGCGGTGCAAGAGGACAACCCGACGCAGAAGTTGTATCTTCTGTTGATTTTGGGTAAACTCATTAAGAT
AATATCTGATAGAAACTCAGCTTCTGTGGATCTCTGTGGAGGTGCTGAAAAATATGGAAATGAAGCCCTTTCGTTAGAAG
AGACGGAATTGATTCACAATGATGATG---------------------GTCAAAGGCTGGTTGATTGTCCTGAAAATTCT
GTTGTGGTTGAGCCAAAACGGCCCAAGCTTGATCTCAAGGTTTCTGACAGCAGTGACAGCCCAGCTTCTGATGGTGCTCA
AGGTGGCAACAATGATGCGTCGGGGTCTGGCACGCCGAAGCTGAAACAGACATCTCTGACGGAGCCAATGGCCACAGAGG
CGGATCGGGAACAAGAACAGAAGTCAGATGTCTTAGAGGCTCCCCTGCCTCTCGATACAACCTCTGTTGACCAATCAGGA
ACTGACAATCCAGGTGACGAATCAGCTGCTGATACTTCAGATGAGGTGCGGGATTCCATGGTGCTGCTGCAGGTCGCACA
AGGTCTCCTGGATCTAAGAAACTGCACAGATCGATGAGGTCCCCTTTGCAGTGAAAGAGGATGTACATCCGAGTGCTTCT
GATCTAAAATCATTAGGTACCCGTTAACTGAAAGTGCACTGCCCTGACCCCTGAGGGTGAAGTCTGAATCGCAACCATGA
TAGACGGTTCAGTGTGAGTCTATACCGGATATCGTGACTGACTCGATGAGATTTCTTGACTCGCTGGTTCCATCACCCTG
AAACCAAAACTCATTTTTTGTGT-----GTCTACTGGTAGATAGGTACAGGTTACT----ATACTGATGATACTTTTGCG
TAATGGCGAAGTCATTGCGTGCTTGCTTCCATGGTGAAGCAGTTT--GTCCAGTTACATGCAATGGATCATTTCTAGTTC
TGCTTTATACTTCATCTGTTTCTGTACATGCTGATATCTTGATAATATTGCTTGCCTCTGGTTCATGAGTGAATATTCCT
CGACATACACTCATGTGGAG--TTGGGTAGCAAATATGGCGTGACC-TTTTTTTT----GCTAGTTGCTCTATTTATAGA
TATATTCACATTTTTGCTCATGAATCGCCTCTTAAATATTAAGATACTTGTGTTGTTGTGCATGTGTCCGTTCTTTGGTG
CAGTTAGCGTTTGAAAGTTTGTGGATGGCGTGCGGGGAATTTTGTTCATGGTCTTGTGCGTTGGAACTGAAAGTCTGAAA
CTATAA-TGCAGGAATTTGGT-------------------------TGCTTTGCATGCTTGGATGATCATGAGTTTATTA
TGGCTGTGACTGCGCTG-TTTTCCTGTTCAGTTGTTTTGCGTCTCACCAACTTAACAAATTCACTAAACTTGGTGATGTT
TGAACTTTTGTGTAATGGACTTTATGAGTGTGGAGTCTCGGCATTCTGAACAGCAACTCAGGAACATCAGTCACCCTGAC
GACGAACTGGATTTGGAAGCTCTTTCCAAGAGGGGCACGGTTTGTGGAAGAAGTTTATCTTGGCAAAGTATGCGTGCACC
AAAGGACATCTTTTGGAGGATCCCACTTCTAGAAAAAGCCTT
>chr5B_1
GGTTCTTGCTTTTCCTGACCAATTCGATCGCCTGCCATTTTCCACAAGAAGCCTCGAAGCCTTCAGGTACAACTCTTTTA
CCATGTCTCGCTAGCTACTGCCTAGTGATTGGTAGATGAAGTTCATCTCTTCGCTGTGACCCCTTGCATGCAAGAATGCT
TGAAATACAAACAGAAATAGAGAGGGAGGGTCATCCCAGAAC--------------------------------------
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-----------------------------------------------CAAGTTTCAGTTCATGTATATTCGTGATGCAAT
GATCGTGTGTCAGTTCTTGGTATGTTCTCTGGAGAGAGAAGTTGTTCTCTTGGAAGAAATATTTGATGAGATTGAATTAA
TGTGTCTGATGCAGTACTTGACGCAATCAATTGGTTGAATTTTTGCGTGTCCATTAGTTATGTTGGTGTTTTGGCCAGCA
AGCTTCTCACTTTTGCCGAGGATTTTTATTAAGCCTTATCTTTTAGTTTACTGGTTATATTGTTGTTGTTTGTTTCAAAA
AATGCCTTGCTTATACGATGCGTTCTTAATTACTGAATGATTGCTGTGATTCAGAAATGGCCCTCAACACAAGATATGCA
GCATGCGTGGAAAGAATATGCCACTTCCATGAATTTCCCCAAATTTAT-ATGATTGTTGTTATTGCTAGTAGGGTGCTAT
CCGTAGGCTATCATTTAGGATATTTCCACAGTTGCTGCTTCCATGGATTTGCTTTTTTGATTTTTTTTTCCTAAATCCAC
TGAATTTCCTATGACGTGCCCTTAACTGTAAGTGTGCTGTGTCTCAGAAATGGGAAAGAAGTGCAGCACCTGTGGCAAGA
CCTACAAAACTAAACGTGCTTTTAATGGCCACAAGATGAAATGCAAGTCCCCCAAGAATCCTGAGCAAAATGCCGCAGGA
CAGGAAGAGGCTTCAGGCAGTGTCGGCGATAGGAAAGATCTGCTTAATTTTCATATAGAAAAGCGTCCACGGAGCAGCCG
TGGTGCAGCGAAGGAGATGGATGGTGGAAATGAAGTCTTCCCGTCAGAAGCGGAGATAGATGCTGCAGAGGGGCTTAGTC
TTCTCCAGTACCCACGTGGCAAGGATACATCTTCTGATAATGAACCAGGAATTGATTATTCAGGGGTTGAATCAGCTGCT
GATAATTCTGATGCGGTGCAAGAGGAGAACCCGACACAGAGGTTATTTGGTGCGCTGATTCTGGGTGCACTCTGGGATAT
AGTATCTAATAGAAACTCAGCTTCTGTGGATCTCTGTGGAGGTGCTGAAAGACGTGGAAATGAAGCCCTTTCGTTAGAAG
AGATGGAATTGATTCACAATGATGATG---------------------GTCAAAGGCTGGTTGATTGTCCTGAAAATTCT
GTTGTGGTTGAGCCAAAACGGCCCAAGCTTGATCTCAAGGTTTCTGACAGCAGTGACAACCCAGCTTCTGATGGTGCTCA
AGGTGGCAACAATGATGCGTCGGGGTCTGGCACGCCGAAGCTGAAACAGACATCTCTGACGGAGCCAATGGCCACAGCGG
CGGATCGGGAACAGGAACAGAAGTCAGATGTCTTACAGGCTCCCCTGCCTCTCGATACAACCTCTGTTGACCAATCAGGA
ACTGACAGTACAGGTGACGAATCAGCTGCTGATACTTCAGATGAGGTGCAGCTTTCCATGGAGCAGC------TCGCACA
AGCTCTCCTGGATCTAAGAAACTGCACAGATCGATGAGGTCCCCGTTGCAGTGAAAGAGGATGTACAGCCGAGTGCTTCT
GATCTAAAATCATTAGGTACCCGTTAACTGAAAGTGCACTGCCCTGACCCCTGAGGGTGAAGTCTGAATCGCAACCATGA
TAGACGGTTCAGTGTGAGCCTATACCGGATATCATG--TGAGTCAATGAGATTTCTTGACTCGCTGGTTCCATCACCCTG
AAACCAAAACTCAGTTTTTT--T-----GTCTACTGGTAGATAGGTACAGGTTACTTACTATACTGATGATACTTTTGCG
TAATGGCGAAGTCATTGCGTGCTTGCTTCGATGGTGAAGCAGTTTT-GTCCAGTTACATGCAATGGATCATTTCTAGTTC
TGCTTTATACTATGTCTGTTTCTGTACATGCTGATATCTTGATAATATTGCTTGCCTCTGGTTCATGAGTGAATATTCCT
CGACATACACTCATGTGGAGTATTGGGTAGCAAATATGGCGTGACCATTTTTTTA----GCTAGTTGCTCTCTTTGTGGA
TATTCCTG--TTTTTGCTCATGAATCGCCTCTTAAATATTAAGATCCTTGTGCATATGTATCT------GTTCTTTGGTG
CAGCTAGCGTGTGAAATTTTGTGGATGGCGTGCGGGGTATTTTGCTCATGGTCTTGTGGGTTGGAACTG--------AAA
CTATAATTGCAGGAATTTGGTGGC-----------------------GCTTTGCATGCTTGGATGATCATGAGTTTATTA
TGGCTGTGATTGCTCTTTTTTTCCTCTTCAGTTGTTTCGCGTCTCACCGACTCTATAAAATCACTAAACTTGGTGATGTT
AGAACTCTTGCGTAATGGACTTCATTGGTGTGGGGTCTCGGCATTCTGAACATCAACTCATGAACATGGCCC--------
-----ACTGGATTTGGAAGCTCTTTTCAAGAGGAGCAGGGTTTTA-GAAGAAGTTGATCTTAGCAAAGTATGC-------
------------------------------------------
>chr5A_1
GGTTCTTGCTTTTCCTGACCAATTCGATCGCCTGCCATTTTCCACAAGAAGCCTCGAAGCCGTCAGGTACAACTCTTTTA
CCATGTCTCGCTAGCCACTGCCTAGTGATTGGTAGATGAAGTTCATTTCTTCGCTGTGACCCCTTGTATGCAAGAATGCT
TGAAATACAGAAAGAAATAGAGAGGG-GGGTCATCCCAGAAC--------------------------------------
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-----------------------------------------------CAAGTTTCAGTTCATGTATGTTCGTGATGCAAT
GATCGTGTGTCTGTTCTTGGTATGTTCTCTGGAGGGAAAAGTTGTTCTCTTGGAAGAAAAGTTTGATGAGATTGAATTAA
TGTGTCTGATGCAGTACTTGACGCAGTTGATTGGATGAATTTTTGCGTGTCCATTAGTTATGTTGGTGTTTTGGCCAGCA
AGTTTCTCACTTTTGCCGAGGATTTTTGTTGAGCCTTATCTTTTAGTTTACTGGTTAGATGGTTGTTGTTTGTTTCAAAG
AATGCCTTGCTTATACGATGCGTTCTTAATTACTGAATGATTGCTGTGATTCAGAAATGGCCCTCAACAGAAGATATGCA
GCATGCGTGGAAAGAATATGCCACTTCCATGAATTTCCCCAAATTTATTATGATTGTTGTTATTGCTAGTAGGGTGCTAT
CCGTAGGCTATCATTTAGGATATTTCCACAGTTGCTGCTTCCATGGATTTGCTTTTTTGAA-AGAAAATCCTAAATCCAC
TGAATTTCCTATGACGTGCCCTTAACTGTAAGTGTGCTGTGTTTCAGAAATGGGAAAGAAGTGCAGCACCTGCGGCAAGA
CCTACAAAAATAAACGTGCTTTTAATGGCCACAAGATGAAATGCAAGTCCCCCAAGAATCCTGAGCAAAATGCTGCAGGA
CAGGAAGAGGCTTCAAGCAGTGTCGGCGATAGGAAAGATCTGCTTAATTTTCATATAGAAAGGCGGCCACGGAGCAGCCG
GGGTGCAGCGAAGGAGATGGATGGTGGAAATGAAGTCTTTCCGTCAGAAGCGGAGATAGATGCTGCAGAGGGGCTTAGTC
TTCTCCAGTACCGATGTGGCAAGGATACATCTTCTGATAATGAACCGGGAATTGATTATTCAGGGGTTGAATCAGCTGCT
GATAATTCTGATGCAGTGCAAGAGGACAACCCG------------TATCTTCCGTTGATTTTGGGTAAACTCAATAAGAT
AATATCTGATAGAAACTCAGCTTCTGTGGATCTCTGTGGAGGCGCTGAAAAATGTGGAAATGAAGCCCTTTCTTTAGAAG
AGACGGGATTGATTCACAATGATGATGTGATGAGGATCTATGTGGACAGTCAAAGGCTGGTTGATTGTCCTGAAAATTCT
GTTGTGGTTGAGCCAAAACGGCCCAAGCTTGATCTCAAGGTTTCTGACAGCAGTGACAACCCAGCTTCTGATTGTGCCCA
AGGTGGCAACAATGATGCGTCGAGGTCTGGCACGCCGAAGCTGAAACAGACATCTCTGACGGAGCCAATGGCCACAGATG
CGGATCGGGAACAAGAACAGAAGTCAGATGTCTTAGAGGCTCCCCTGCCTCTCGCTACAACCTCTGTTGACCAATCAGGA
ACTGACAGTCCAGGTGACGAATCAGCTGCTGATACTTCAGATGAGGTGCGGGATTCCATGGTGGTGCTGCAGGTCGCACA
AGGTCTCCTGGATCTAAGAAACTGCACAGATCGATGAGGTCCCCGTTGCAGTGAAAGAGGATGTACAGCCGAGTGCTTCT
GATCTAAAATCATTAGGTACCCGTTAACTGAAAGTGCACTGCCCTGACCCCTGAGGGTGAAGTCTGAATCGCAACCATGA
TAGACGGTTCAGTGTGAGCCTATACAGGATATCGTGTC-GAGTCGATGAGATTTCTTGACTTGCTGGTTCCATCACCCTG
AAACCAAAACTCAGTTTTTT--TTTTGCGTCTACTGGTAGATAGGTACAGGTT----ACTATACTGATGATACTTTTGCG
TAATGGCGAAGTCATTGTGTGCTTGCTTCGATGGTGAAGCATTTTTTGTCCAGTTACATGCAATGGATCATTTTTAGTTC
TGCTTTATACTT----TGTTTCTGTACATGCTGATATCTTGATAATATTGCTTGCCTCTGGTTCATGAGTGAATATTCCT
CGACATACACTCATGTGGAGTATTGGGTGGCAAATATGGCGTGGCCTTTTTTTTTGTTTGCTAGTTGCTCTGTTTATATA
TATATCCATATGTTTGCTCATGAATCGCCTCTTAAA--------------------------------------------
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----AA-TACAGGAATTTGGATGATCATGAGTTCATTATGGCTGGATGCTTTGCATGCTTGGATGATCATGAGTTTATTA
TGGCTGTGATTGCGCTG-TTTTCCTGTTCAGTCGTTTCGCGTCTCAACAACTTAACAAATTCACTAAACTTGGCGATGTT
TGAACTTTTGTGTAATGGACTTTATGAGTGTGGAGTCTCGGCTTTCTGAACATCAACTCAGG---------------GAC
GATGAACTGGATTTGGAAGCTCTTTTCAAGAGGGCCAGGGTTTGTGGAAGAAGTTGATCTTGGCAAAGTATGCGGGCACC
-AAGGACATCTTTT----------------------------
>SNPs
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--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S-S---------
---------S------------------------------------------S---------------------------
----------------S-----------------------------------------------------S---------
--------------------------S--S--------------------------------------------------
---------------------S----------------------------------------------------------
------------------------------------------S-------------------------------------
-S-----------------------------------------------------S-----------------------S
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----------S---------------------------------------------------------------------
-----------------------S--S-----------------------------------------------------
--------------------------------------------------S-----------------------------
---------------------------------S--------------S-------------------------------
-----------------------------------S----S---S-------S--------------------S------
-----------------------------------------------------S--------------------------
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----------------------------------------------------------S---------------------
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-------S------------------------------------------------------------------------
--------------------------------------------S----------------------S------------
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------------------S-----------------S----S--------------------------------------
-------------S-----SSS----------------------------------------------------------
-----------------------------S--------------------------------------------------
------------SS------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-----S--S------------------------------------S------SSSS---SSS-SSSSSS-----------
---S------S-----S--------------------S------S-------------S----------SSSSSSSS---
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---------S---------------------------S------------------------------------------
----------------------------------------------------S--------------SSSS-SSSSS---
--S----------------------S-----------S-----------------S------------------S-----
S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_490
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---------------------------------------------------------------------CCTGATGCAAT
GATCGTGTGC----------------------------------------------------------------------
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>reverse_2534
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-----------------------------------------------------TGTTGTGCATGTGTCCGTTC-------
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