>input_sequence_65275
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---------------ATGGCGTCTAGCAAGCCGACAAACCCCGAGATAGA------CAATGGCATGGAGTGCTCCTCCCC
GGAATCGGGGGCCGAGGACGCCGTGGAGTCGTCGTCGCCGGCGC------------------CGGCGCCATCTTCGCGCT
TCAAGGGCGTCGTGCCGCAGCCGAACGGGCGCTGGGGCGCGCAGATCTACGAGAAGCACTCGCGGGTGTGGCTTGGCACG
TTCGCGGACGAGGAATCCGCCGCGCGCGCCTACGACGTGGCCGCGCTCCGCTTCCGCGGCCGCGACGCCGTCACCAACTA
CCAGCACCCACTGGCGGCGGAGGGGGCCAGCTCGTCGTCCACGAGC---------------GAGCTTGCCTTCCTCGCCG
ACCACTCCAAGGCCGAGATCGTCGACATGCTCCGCAAGCACACCTACGCCGACGAGCTCCGGCAGGGCCTGCGCCGCGGG
CACGG---------GCGCGCGCAGCCCACGCCGGCGTGGGCGCGAGAGTTCCTCTTCGAGAAGGCCGTGACCCCGAGCGA
CGTCGGCAAGCTCAACCGCCTGGTGGTTCCGAAGCAGCACGCCGAGAAGCACTTCCCTCCGAC---GACGGCGGCGGCCA
CCGGCAGCAACGGCAAGGGCTTGCTGCTCAACTTCGAGGACGGCGAAGGGAAGGTGTGGAGGTTCCGGTACTCGTACTGG
AACAGCAGCCAGAGCTACGTGCTCACCAAGGGCTGGAGCCGCTTTGTCCGGGAAAAGGGCCTCTGCGCCGGCGACACCGT
GACGTTCTCCCGGTCGGCGTACGTGATGAATGACACGGATGAGCAGCTCTTCATCGACTACAAACAGAGTAACAAGAATG
ACGAGGCGGCCGACGCAGCCACTGCCGATGAGAATGAGGCCGGCCATGTCGCCGTCAAGCTCTTTGGCGTCGACATTGGC
GGAGGTGGGATGGGGGGGTCATCAGGTGGATGA-----------------------------------------------
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-------------------
>chr4B_1_TraesCS4B01G325600
ACAATTGGAGTCTTCAACCCCGTATACAAAAAA-TAGGAGACATTAGTTGTGTGTTTTCCCCCCTCAAATCAATAGTTTT
TTTCTACCCATTCCATTGACATCCAAGGGATGTGGTTCATTTTCAACCTCCAACCCTTTTCTTCCACATCCTCACACGCG
ACGCGATTTACCATATAACCAAATTCCCGCTCTCTGCCTCGCCTCCGACGCGGACCTATCCGAGCCCTAACCTATCCCTG
TCACGAGCTCGACAGCGATCTATTTCGAGTGGCAGCGCAAAGTGAAAAGGGATCCCCACCCGCACTTGTCATCCCTTGTC
CTCGCCTCCATCCGCCGCAGCGCTTTGCATCATCCCCATCTACCACAGCTCCATCCTGTCTCATGCTCGGGTGCAACATG
GTATGTGGAATCGACTAGTCCAGAAAATAATTTCAGAACAAAAATCTTATCTGGCCAACGTTCGCTGCGACGGGGTGGCA
TTTCAAACGTTTGTCATGACAGTCTTATTTGTGTCGGGGCTAATAGTTTCTTCGGAGGGACTGGCGTT--TTTTAGGAGG
ATGGTAGTTTTAAGCCTTCATGGCAGAAAATGTCACGCTATTCTGAAAAAACTATCATCCCACACACAACTAAAAATGAC
ATCAAAACATTCACAAATGCCACCCCTCCTCGCGGACATTCGCCAGCTA-------------------------------
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--------AGGAGGTCCATTTCAGAAACCTACTCCCTCCGTTCGAAATTATTTGTCTCGGAAATGGATGTCTCGAAATTA
CTTGTCTACTCCCTCGGCCTGGATGTATGGGCAAATACGTCGTACTCAGCTTTACAGAATTCCGACATTC------TATA
TTTGAAAATATTCCCGGACATTAAAACTAAGCACACATGAAAAACAAGCATCA---TATTTGGCCTACGGAAATGGCAAA
TTTCCAGCACTTGTTTTTAACCATTCTGAGGAGTGGACACAAGTCCCGCCATCTACGCAACGACCATAGTGCTTGTCAAT
TATCCCCA----CCGATGGCGTCTAGCAAGCCGACAAACCCCGAGATAGA------CAATGGCATGGAGTGCTCCTCCCC
GGAATCGGGGGCCGAGGACGCCGTGGAGTCGTCGTCGCCGGCGC------------------CGGCGCCATCTTCGCGCT
TCAAGGGCGTCGTGCCGCAGCCGAACGGGCGCTGGGGCGCGCAGATCTACGAGAAGCACTCGCGGGTGTGGCTTGGCACG
TTCGCGGACGAGGAATCCGCCGCGCGCGCCTACGACGTGGCCGCGCTCCGCTTCCGCGGCCGCGACGCCGTCACCAACTA
CCAGCACCCACTGGCGGCGGAGGGGGCCAGCTCGTCGTCCACGAGC---------------GAGCTTGCCTTCCTCGCCG
ACCACTCCAAGGCCGAGATCGTCGACATGCTCCGCAAGCACACCTACGCCGACGAGCTCCGGCAGGGCCTGCGCCGCGGG
CACGG---------GCGCGCGCAGCCCACGCCGGCGTGGGCGCGAGAGTTCCTCTTCGAGAAGGCCGTGACCCCGAGCGA
CGTCGGCAAGCTCAACCGCCTGGTGGTTCCGAAGCAGCACGCCGAGAAGCACTTCCCTCCGAC---GACGGCGGCGGCCA
CCGGCAGCAACGGCAAGGGCTTGCTGCTCAACTTCGAGGACGGCGAAGGGAAGGTGTGGAGGTTCCGGTACTCGTACTGG
AACAGCAGCCAGAGCTACGTGCTCACCAAGGGCTGGAGCCGCTTTGTCCGGGAAAAGGGCCTCTGCGCCGGCGACACCGT
GACGTTCTCCCGGTCGGCGTACGTGATGAATGACACGGATGAGCAGCTCTTCATCGACTACAAACAGAGTAACAAGAATG
ACGAGGCGGCCGACGCAGCCACTGCCGATGAGAATGAGGCCGGCCATGTCGCCGTCAAGCTCTTTGGCGTCGACATTGGC
GGAGGTGGGATGGGGGGGTCATCAGGTGGATGAAGAGCA---AGGTAACTTCTTCACCCAT-------GGTGTGATTGCG
ACAGCCATGGTCTTTCTCCCATGGTGCG----ATTTCCATTTCGCGACAGAAACAGCGTTTGTAAGTGAGGGGCAATTCC
TTGACATATTTCATGTCGATCTTAATTGATTTCTCCCTTTTTGAGGTTTATCGGTCAGCGATGTTGCAAAGGACCTGAAT
ATCCAGTCAGATTTTTATGCATTGGCAAATCGGGCATTTCTCATTGCAAATTATGTTCACCCGGATGACAAATTTAGTGG
ACAAGCATGGTATATCCATTTTTTCACTTCA-TTTGTTTTTGTCAGAAAATTATCATGCTTGTAAATTAAAATAGCCATA
ATCGCACCAATAGAAATTGCCCAAAAGAACACCAGATATGATC-------------------------------------
----------------------------TACGTTTTAAATTACTGTGTACGTTCATG-GTGATATTATTGAATATGCGGT
TACCGTTAGAG--CATCATGTCCAGCAGCATTGTTTGGGCTAATCATGCGTGATCCTTTGTCCAAGCCATAGCTTAGCTA
AACACAGGCAGGTGTGCAGCAGCCAGCAGGCCAGGGGGTGCCTTTGTGCGGTTGCATGTTGATACGATGTTTCCCGATAT
AGAAAAACGTCCAGCGTTATTTTAGGCTGTTTTCTGCTAG---TATGAACTTCGCGTCTTGCCTACTCCATGTTAACCAC
TTTTGTCTCCCTCCGTTCCTAAATATAAGTTGTAGAGATATCACTATAGACCACATATGGATGTATGTAGATACATTCTA
AGTGTAGATTCACTCATTTTGCTCCGTATATGGTCCATAATGAAATCTCTTCAAAGACTTATATTTAGGAACGGAGGGAG
TACATACTAGTACAGTA--------GTACGTACTGTAGTACATACAGTGCATATATATACTCGACATTAGT--------A
TCAGGGGACCCCTCAACCTTGGCTGCTGTAGCCATGATGGTCAGGCTTTATAAATGGCCTTGTATGGC----AGCTGCCT
GCCTACCCGCAGCAACAGC
>chr5A_5
----TTGGAGTCTCCAACCCCGTATACAAAAATGTAGGAGGCATTAGTTGTGTGTTTTCCCC--TCAAATCAATCGA-TT
TTTCTAGCCGTCCCATTAACATCGAAGGGGTGTGGTTCATTTTCAACATCCAACCATTTCCTTCCTCATCCTCACACGCG
ACGCAATTTACCAAATAACCAAATTCCCACTCTCTACATCGCCTCTGACGCAGACCTATCCGAGTCCTCACCTATCCATG
TCACGACCTCGACATCGATCTATTTCAAATGGCGGCACAAAGTGAAAAGGGATCCCCACCGGCACTTGTCAACCCTTGTC
CTCGCCTCCATCCGCCGCAGCACTTTGCATCATCCCCATCTATGACAGCTCCATCCTATCTCATGCTCGGGCGCAAGATG
ATATCTAGAATCAACTGGTCCAGAAAATATTTTCAGAATGGAAATCTTATCTGACCGACGTTCG-TGGGAGGGGGTGTCA
TTTCGAATGTTTTTCATTGCAATTTTAGTTGTGTCGGGGCTAACAGTTTCTTCAGAGCAATATGAAGTTGTTTTAGAAGG
ATGGCAGTTTTGAGCCTTCCTGTCAGAAAATGTCATGCTATTCTAAAGAAACTGTTACCCCACACACAATGTAAAATGTG
ATCAAAACATTCGCAAATGCCACTCCTCCCGGCAAACATTCGCCAGCTAAGATCATCTACAGTCAGATGCCCCAAAACCT
CCTCATACGCGTGGGCGGGCCACCCCGGTCACGAAATTTCGACCCATACGGGGCGCCTCAAACGGGCCTCAAACGCTCGG
GCTGACCGGCACCCCTCATATCCAGGCCAAATATGAGGCGGGCATGGGGGCGCCAGGGCGCGCCCAGACGCATCCGCCCC
GTCGTACTGACGTTGGGGTCCCACACAAAATCACCGAGAAATCCAGCAGTCGGACGGTAGTCTCCTCCGGTGGGGGGTTG
CGAATGTCGTGTGGCGCCGATCCGGCTGATCGCCCGAGGCCAAATCCAGCTATTTAAGTCGGCCGGCGTCTCCCAACCCT
AGCCCATCCATCCCCTCCCTCTCCGGACCGCCGGCCCGAGCCCATCGACCTCCTCTGTCTCACTCCGACGCTTTTCCCAT
GCCCTCCGGCTTCGCCATGGTCCGGAAGAAGATAACCACCCATGCCATGCTCATGCCGAAGCGCCGGTACGAGATCGAGC
AGGAGATCTAGGCGAGGCACGCCGCACGCATCGTTGTCGGGTTGCCTCTGGACTCGCCGGAGCTGGAGGAGTAGGAGGAG
GAGCACGCGAAGGAGGGCGAGGGAGAGGAGCAGCAATCGGCTCCGATGGAGGACGAGGAGGAGGCGGAGCAGCCGGAGCA
GGATCTCGCGTTGGCTCCTGGCTTCAATATGGAGCAGGCGGAGTCACCGTCACCCAAGCGGATGAGATGACGGAGCAACG
GGCCATCCCGAAGTCCATTCAAGATGAGGCCTATGTGGAGGCCAACCGACGGTTCATCCGGCAGGAACGGGTGGCGACCG
ATGCCCTCTTTGATGAGGTCGAAGCGGAGATGGATGCGCAAGCTGCAACGGGGGAACTGCAGGAGCCAGAGTTGCGGCTG
CCGCCCATGTACCCGGCGCCGGGCACGTAGATTATGAACATCTCCGACGAGGACTAGACTAGTTGATCTACGTGGAACAT
AGGATTTTTTTTAACATGCTTTTGTACGGATTTAAGATTTCTACTATGAAGTATCCGGATGCACATGAAAAAATTTGAGG
CTTGACCGGTTAATGTTCGTTAACGTATCCGGACGCGTCCGCTGGCATTTGAGGGTCCAGATTTGTCTACGCGGCTATAG
ACGCTCTAAGGAGGTCCATTTTGCAAACCTAATATTTAGCAAATCTAC-AAAAGTATTGCACT-----------------
----------------GCCTGGATGTATGCGCAAATACGTCGTACTCAGCTTTACAGAATTCCGACGTTCTATATTTATA
TTTGAAGATATTCCCGGACA---------------CATGAAAAACGAGCATCATACTATTTGCCCTACGGAAATGGCAAG
TTTCCATCACTTGTTTTTAACCATTCCGAGGAGTCGACACAAGTCCCGGCATCTACGCAACGGCCATAGTGCTTGTCAAT
TATCCCCC----CCGATGGCGTCTGGCAAGCCGACAAACCCCGAGATAGA------CAATGACATGGAGTGCTCCTCCCC
GGAATCGGGTGCCGAGGACGCCGTGGAGTCGTCGTCGCCGGCGC------------------CAGCGCCATCGTCCCGGT
TCAAGGGAGTCGTGCCGCAGCCCAACGGGCGCTGGGGCGCGCAGATCTACGAGAAGCACTCGCGGGTGTGGCTTGGCACG
TTCGCGGACGAGGAATCCGCCGCGCGCGCCTACGACGTGGCCGCGCTCCGCTTCCGCGGCCGCGACGCCGTCACCAACTA
CCAGCTCCCGCTGGCGGTGGAGGGGGCCAGCTCGTCGTCCACGAGC---------------GAGCTCGCCTTCCTCGCCG
ACCACTCCAAGGCCGAGATCGTCGACATGCTCCGCAAGCACACCTACGCCGACGAGCTCCGGCAGGGCCTGCGCCGCGGG
CACGG---------GCGCGCGCAGCCCACTCCGGCGTGGGCGCGAGAGTTCCTCTTCGAGAAGGCCGTGACCCCGAGCGA
CGTCGGCAAGCTCAACCGCCTGGTGGTTCCGAAGCAGCACGCCGAGAAGCACTTCCCTCCGAC---GACGGCGGCGGCCA
CCGGCAGCAACGGCAAGGGCTTGCTGCTCAACTTCGAGGACGGCGAAGGGAAGGTGTGGCGGTTCCGGTACTCGTACTGG
AACAGCAGCCAGAGCTACGTGCTCACCAAGGGCTGGAGCCGCTTCGTCCGGGAGAAGGGCCTCGTCGCCGGCGACACCGT
GACGTTCTCCCGGTCGGCGTACGTGATGAATGACACGGAAGAGCAGCTCTTCATCGACTACAAGCAGAAGAACAAGAATG
ACGAGGCGGCCGACGCAGCCA---------AGAATGAGGCCGGCCATGCCGCCGTCAAGCTCTTCGGCGTCGACATTGGC
GGAGGAGAGATGGCGGGGTCATCAGGTGGGTGAAGAGCAACAAGGTAAGTTCTTCAGCCACGGGCCACGGTGTGATTGCG
ATAGCCATGGTCTTTCTCCCATGGTGCGAGCGATTTCCATTTCGCGACAGAAGCAACGTTTGTAAGTGAGAGACAATTCC
TTGACCTTTCTCGTGTCGATCTTAATTGATTTCTCTCCTTTTGTGGTTTATCGGACAGCGATGTTGCAGAGGACCTGAAT
ATTCAGTCAGATCTTTATGCATTGGCAGATCGAGCATTTT-CATGGCAATTTATGTTGACT-GGATGTCAAATTTAGTTG
ACGAGCGTGATAAATCTGTC---TCAGTACACTTTATTTTCTCTAGAAAACTATCGGGCTCACAAACTAAACTTGCCATC
ATTACACCAATATAAATTGCCCAAGAAAAAATTAAATTTGCCATGACTAAAAAGCTACTCCCTCTGTAATAGTGATCTAA
ACACTCTTATATTTCTTTACAGAGGTAGTATGTTTTAAATTAGTGTATATCTTCAATTGTGATATTATTGAATATGCGGT
TACCGTGAGAG--CATGATGA-CAGCAGCATTTTTTGGGCTAATCATG----ATGGGTTGTTCAAGCCATAACTAAGCT-
AACACAGGCAGGTGTGCAGCAGCCAGCAGGCCAGGGGGTACCTTTGTGCGGTTGCATATTGATACGATGTTTCCCGATAT
AGAAAAACGTCCAGCCTAATTTTAGGCTGTTTTCTGCTACTATTATGAACTTCGCGTCTTGCCTACTCCATGTTAACCAC
TTTTGTCTCCTTCCT-----------------------------------------------------------------
------------------------------------------------------------------------------AG
TACATAGTAGTACAGTACTGCAGTAGTACGTACTGTTGCACATACTGTGCATATATATACTCGACATTAGTGCAGTATCA
TCAGGGGACCCCTCAACCATAGCTGCTGTAGCCATGATGGTCAGGCTTTATAAATGGCCTTCTATGGCAGCTAGCTGCCT
GCCTACCGGCAGCAACAGC
>chr4D_291
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---------------------------------------------------ATCCCCACCCGCACTTGTCATCCCTTGTC
CTCTCCTCCATCCGCCGCAGCGCTTTGCATCATCCCCATCTACGACAGTTCCATCATGTCTCATGCTCGGGCGCAAGATG
GTATGTGGAATCGACTAGTCCAGAAAATAATTTCAGAACGGAAATCTTATCTGGCCAACATCCGCTGGGACGGCGTGGCA
TTTCGAACGTTTGTCATGACAGTCTTAGTTGTGTCGGGGCTAACAGTTTCTTCTTTAGAGCGACTGACTTTTTTAGGAGG
ATGGTAGTTTTGAGCCTTTATGTCAGAAAATGTCATGCTATTCTAAAAAAACTATTATCCCACACACAACTAAAAATAAC
ATCAAAACGTTCGCAAATGCCACCCCTCCTGGCGAACATTCGCCAGCTA-------------------------------
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--------AGGAGGTCCATTTCAGAAACCTAATGTTTAGCAAATCTACAAAAAATATTGCAGT-----------------
----------------GCCTGGATGTATGCGCAAATACGTCGTACTCAGCTTTACAGAATTCCGACATTC------TATA
TTTGAAGATATTCCCGGACATTAAGACTAAGCACACATGAGAAACAAGCATCA---TATTTGCCCTACGGAAATGGCAAG
TTTCCAGCACTTGTTTTTAACCATTCTGAGGAGTCGACACAAGTCCCGGCATCTATGCAACGACCATAGTGCTTGTCAAT
TATCCCCACCGGCCGATGGCGTCTAGCAAGCCGACAAACCCCGAGATAGA------CAATGACATGGAGTGCTCCTCCCC
GGAATCGGGGGCCGAGGACGCCGTGGAGTCGTCGTCGCCGGCGC------------------CGGCGCCATCTTCGCGCT
TCAAGGGCGTCGTGCCGCAGCCCAACGGGCGCTGGGGCGCGCAGATCTACGAGAAGCACTCGCGGGTGTGGCTTGGCACG
TTCGCGGACGAGGAAGCCGCCGCGCGCGCCTACGACGTTGCCGCGCTCCGCTTCCGCGGCCGGGACGCCGTCACCAACCA
CCAGCTCCCGCTGGCGGCGGAGGGGGGCAGCTCGTCGTCCACGAGC---------------GAGCTCGCCTTCCTCGCCG
ACCACTCCAAGGCCGAGATCGTCGACATGCTCCGCAAGCACACCTACGCCGAGGAGCTCCGGCAGGGCCTGCGCCGCGGC
CACGG---------GCGCGCGCAGCCCACGCCGGCGTGGGCGCGAGAGTTCCCCTTCGAGAAGGCCGTGACCCCGAGCGA
CGTCGGCAAGCTCAACCGCCTGGTGGTTCCAAAGCAGCACGCCGAGAAGCACTTCCCTCCGAC---GACGGCGGCGGCCA
CCGGAAGCAACGGCAAGGGCTTGCTGCTCAACTTCGAGGACGGCCAAGGGAAGGTGTGGCGGTTCCGGTACTCGTACTGG
AACAGCAGCCAGAGCTACGTGCTCACCAAGGGCTGGAGCCGCTTTGTCCGGGAAAAGGGCCTCCGCGCCGGCGACACCGT
GACGTTCTCCCGGTCGGCGTACGTGATGAATGACACGGATGAGCAGCTCTTCATCGACTACAAACAGAGTAACAAGAATG
AGGAGGCGGCTGACGCGGCCA---------AGAATGAGTCCGGCCATGCCGCCGTCAAGCTCTTCGGCGTCGACATTGGC
GGAGGTGGGATGGCGGGGTCATCAGGTGGGTGAAGAGCA---AGGTAAGTTCTTCACCCAT-------GGTGTGACTGCG
ATAGCCATGGTCTTTCTCCCATGGTGCG----ATTTCCATTTCGCGACAGAAACAGCGTTTGTAAGCGAGGGACGATTCC
TTGACATTTTTCATGTCGATCTTAATTGATTTCTCTCTCTTTGAGGTTTATCGGACAGCGATGTTGCAGAGGACCTGAAT
ATCCAGTCAGATTTTTACGCATTGGCAAATCGAGCATTTTTCATGGCAAATTAAGTTTATCGGGATGACAAATTTAGTTG
ACCAGCATGATAAATCCGTC---TCATTTCA-TTTCTTTTTGCCAGAAAATGGCCGTGTTGGTAAACTAAATTAACCGTA
ATCGCACCTAAACAAACTGCCTAGAAAAACATCAAATTTCGCATGCCTAAAAATCTAC----------------------
-------------------------------GTCTTAAATTAGTGTATACGTTCATG-GTGATATTATTGAATATGCGGT
TACCGTAAGAGAGCATCATGACCAGCAGCATTTTTTGGGCTAATCATGCATGATGGGTTGTTCAAGCCATAGCTAAGCT-
AACACAGGCAGGTGTGCAGCAGCCAGCAGGCCAGGGGGTGCCTTTGTGCGGTTGCATGTTGATACGATGTTTCCCGATAT
AGAAAAACGTCCAGCCTAATTTTAGGCTGTTTTATGCTAGTACTATGAACTTCGCGTCTTGCCTACTCCATGTTAACCAC
TTTTGTCTCCTTCCT-----------------------------------------------------------------
------------------------------------------------------------------------------AC
ATAGTACA---------------------GTACTGTTGTACATACTGTGCATATATATACTCGACATTAGT--------A
TCAGGGGACCCCTCAACCTTGGCTGCCGTAGCCATGATGGTCAGGCTTTATAAATGGCCTTGTATGGCAGCTAGCTGCCT
GCCTACTGGCAGCAACAGC
>chrUn_986
CAATAAT-------------------------------------------------------------------------
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----CCCC----ACGATGGCATCTGGCAAGCCGACAAACCACGGGATGGAGGACGACAACGACATGGAGTACTCCTCCGC
GGAATCGGGGGCCGAGGACGCGGCGGAGCCGTCGTCGTCGCCGGTGCTGGCGCCGCCCCGGGCGGCTCCATCGTCGCGGT
TCAAGGGCGTCGTGCCGCAGCCCAACGGGCGGTGGGGAGCGCAGATCTACGAGAAGCACTCGCGGGTGTGGCTCGGAACG
TTCCCCGACGAGGACGCCGCCGTGCGCGCCTACGACGTGGCCGCGCTCCGCTTCCGCGGCCCGGACGCCGTCATCAACCA
CCAGCGACCGACGGCCGCGGAGGAGGCCGGCTCGTCGTCGTCCAGGAGCGAGCTGGATCCAGAGCTCGGCTTCCTTGCCG
ACCACTCCAAGGCCGAGATCGTCGACATGCTCCGGAAGCACACCTACGACGACGAGCTCCGTCAGGGCCTGCGCCGCGGC
CGCGG---------GCGCGCGCAGCCGACGCCGGCGTGGGCACGAGAGCTCCTCTTCGAGAAGGCCGTGACCCCGAGCGA
CGTCGGCAAGCTCAACCGCCTCGTGGTGCCGAAGCAGCAGGCCGAGAAGCACTTCCCTCCGAC---CACTGCGGCGGCCA
CCGGCAGCAACGGCAAGGGCGTGCTGCTCAACTTCGAGGACGGCGAAGGGAAGGTGTGGCGCTTCCGGTACTCGTACTGG
AACAGCAGCCAGAGCTACGTGCTCACCAAGGGCTGGAGCCGCTTCGTCAAGGAGACGGGCCTCCGCGCCGGCGACACCGT
GGCGTTCTACCGGTCGGCGTACGG---GAATGACACGGAGGATCAGCTCTTCATCGACTACAAGAAGATGAACAAGAATG
ACGATGCTGCGGACGCGGCGATTTCCGATGAGAATGAGACAGGCCATGTCGCCGTCAAGCTCTTCGGCGTTGACATTGCC
GGTGGAGGGATGGCGGGATCATCAGGTGGCTGAAGGGCACGG--------------------------------------
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>chr3A_986
CAATAAT-------------------------------------------------------------------------
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----CCCC----ACGATGGCATCTGGCAAGGCGACAAACCACGGCATGGAGGACGACAACGACATGGAGTACTCGTCTGC
GGAATCGGGGGCCGAGGATGCGGCGGAGTCGTCGTCGTCGCCGGTGTTGGCGCCGCCCCGGGCGGCTCCATCGTCGCGGT
TCAAGGGCGTCGTGCCGCAGCCCAACGGGCAGTGGGGCGCGCAGATCTACGAGAAGCACTCGCGGGTGTGGCTCGGCACG
TTCCCCGACGAGGACGCCGCCGCGCGCGCCTACGACGTGGCCGCGCTGCGCTTCCGTGGCCCGGACGCCGTCATCAACTT
CCAGCGCCCGCCGGCGGCGGAGGAGGCCGGCTCTTCGTCGTCCAGAAGCGAGCTCGATCCCGAGCTCGGTTTCCTCGCCG
ACCACTCCAAGGCCGAGATCGTGGACATGCTCCGGAAGCACACCTACGACGACGAGCTTCGGCAGGGCCTGCGCCGCGGC
CGCGG---------GCGCGCGCAGCCGACGCCGGCGTGGGCGCGAGAGCTCCTCTTCGAGAAGGCCGTGACCCCGAGCGA
CGTCGGCAAGCTCAACCGCCTGGTGGTGCCGAAGCAGCACGCCGAGAAGCACTTCCCTCCGAC---CACTGCGGCGGCCA
CCGGCAGCAACTGCAAGGGCGTGCTGCTCAATTTCGAGGACGGCGAGGGGAAGGTGTGGCGCTTCCGCTACTCGTACTGG
AACAGCAGCCAGAGCTACGTGCTCACCAAGGGCTGGAGCCGCTTCGTCAAGGAGACGGGCCTCCGCGCCGGCGACACCGT
GGCGTTCTACCGGTCGGCGTACGG---GAATGACACGGAGGACCAGCTCTTCATCGACTACAAGAAGATGAACAAGAATG
ACGATGCTGCCGACGCGGCGATTTCCAATGAGAATGAGACAGGCCATGTCGCCGTCAAGCTCTTCGGCGTTGACATTGCC
GGTGGAGGGATGGTGGGATCATCAGGTGGCTGAAGGGCA-----------------------------------------
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>chr3B_1090
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------------------------------GTCGGCACCGGCGCAGTCGGCG------------------TCGTCGCGGT
TCAAGGGGGTTGTGCCGCAGCCCAACGGGCGGTGGGGCGCCCAGATCTACGAGCGCCACGCTCGCGTCTGGCTCGGCACG
TTCCCGGACGAGGACTCTGCGGCGCGCGCCTACGACGTGGCAGCGCTCCGGTACCGGGGCCGCGAGGCCGCCACCAACTT
CCCCTGCGCGGCCGC---------------------------------------AGAGGCGGAGCTCGCTTTCCTGGCGG
CGCACTCCAAGGCCGAGATCGTCGACATGCTCCGGAAGCACACCTACGCCGACGAGCTCCGCCAGGGCTTGCGGCGCGGC
CGCGGCATGGGGGCCCGCGCGCAGCCGACGCCGTCGTGGGCGCGGGAGCCCCTCTTCGAGAAGGCCGTGACCCCGAGCGA
CGTCGGCAAGCTCAACCGCCTCGTGGTGCCGAAGCAGCACGCCGAGAAGCACTTCCCCCTGAAGCGCACGCCGGAAACGA
CGACCACCACCGGCAAGGGGGTGCTGCTCAACTTCGAGGACGGCGAGGGGAAAGTGTGGAGGTTCCGGTACTCGTACTGG
AACAGCAGCCAGAGCTACGTCCTCACCAAGGGTTGGAGCCGCTTCGTCCGGGAGAAGGGCCTCGGTGCCGGCGATTCCAT
CGTGTTCTCGTGCTCGGCGTACG---------------------------------------------------------
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>chr3A_1098
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--------------------------------------CGGCGCAGTCGGCG------------------TCGTCGCGGT
TCAAGGGGGTTGTGCCGCAGCCCAACGGGCGGTGGGGCGCCCAGATCTACGAGCGCCACGCGCGCGTCTGGCTCGGCACG
TTCCCGGACGAGGACTCGGCGGCGCGCGCCTATGACGTGGCCGCGCTCCGGTACCGGGGCCGCGAGGCCACCACCAACTT
CCCCTGCGCGGCCGC---------------------------------------AGAGGCGGAGCTCGCCTTCCTGGCGG
CGCACTCCAAGGCCGAGATCGTCGACATGCTCCGGAAGCACACCTACGCGGACGAGCTGCGCCAGGGCCTTCGTCGCGGC
CGCGGCATGGGGGCGCGCGCCCAGCCGACGCCGTCGTGGGCGCGGGAGCCCCTCTTCGAGAAGGCCGTGACCCCGAGTGA
CGTCGGCAAACTCAACCGCCTCGTGGTGCCGAAGCAGCACGCCGAGAAGCACTTCCCCCTGAAGCGCACGCCGGAGACGA
CAACGACAACCGGTAAGGGGGTGCTGCTCAACTTCGAGGACGGCGAGGGGAAAGTGTGGAGGTTCCGGTACTCGTACTGG
AACAGCAGCCAGAGCTACGTCCTCACCAAGGGTTGGAGCCGCTTCGTCCGTGAGAAGGGCCTCGGTGCCGGCGACTCCAT
CGTGTTCTCGTGCTCGGCCTACG---------------------------------------------------------
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>chr3D_1098
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--------------------------------------CGGCGCAGTCGGCG------------------TCGTCGCGGT
TCAAGGGGGTTGTGCCGCAGCCCAACGGGCGGTGGGGCGCCCAGATCTACGAGCGCCACGCTCGCGTCTGGCTCGGCACG
TTCCCGGACGAGGACTCTGCGGCGCGCGCCTACGACGTGGCAGCGCTCCGGTACCGGGGCCGCGAGGCCGCCACCAACTT
CCCCTCCGCGGCCGC---------------------------------------AGAGGCGGAGCTCGCCTTCCTGGCGG
CGCACTCCAAGGCCGAGATCGTCGACATGCTCCGGAAGCACACCTACGCCGACGAGCTCCGCCAGGGCTTGCGGCGCGGC
CGCGGCATGGGGGCCCGCCCGCAGCCGACGCCGTCGTGGGCACGGGAGCCCCTCTTCGAGAAGGCCGTGACCCCGAGCGA
CGTCGGCAAGCTCAACCGCCTCGTGGTGCCGAAGCAGCACGCCGAGAAGCACTTCCCCCTGAAGCGCACGCCGGAGACGA
CGACCACCACCGGCAAGGGGGTGCTGCTCAACTTCGAGGACGGCGAGGGGAAAGTGTGGAGGTTCCGGTACTCGTACTGG
AACAGCAGCCAGAGCTACGTCCTCACCAAGGGTTGGAGCCGCTTCGTCCGGGAGAAGGGCCTCGGTGCCGGCGACTCCAT
CGTGTTCTCGTGCTCGGCATACG---------------------------------------------------------
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>chr3B_1104
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-----------------------------------------------CGGCG------------------TCGTCTCGGT
TCAAGGGCGTGGTGCCGCAGCCAAACGGGCGATGGGGCGCCCAGATCTACGAGCGCCACGCTCGCGTCTGGCTCGGCACG
TTCCCAGACCAGGACTCGGCGGCGCGCGCCTACGACGTAGCCTCGCTCAGGTACCGCGGCCGCGACGTCGCCTTCAACTT
CCCGTGCGCGGCCGT---------------------------------------GGAGGGGGAGCTCGCCTTCCTGGCGG
CGCACTCCAAGGCTGAGATAGTGGACATGCTCCGGAAGCAGACCTACGCCGATGAACTCCGCCAGGGCCTGCGGCGCGGC
CGTGGCATGGGGGCGCGCGCGCAGCCGACGCCGTCGTGGGCGCGGGAGCCCCTTTTCGAGAAGGCCGTGACCCCTAGCGA
TGTCGGCAAGCTCAATCGCCTCGTAGTGCCGAAGCAGCACGCCGAGAAGCACTTCCCCCTGAAGCGCACGCCGGAGACGC
CGACCACCACCGGCAAGGGCGTGCTGCTCAACTTCGAGGACGGCGAGGGGAAGGTGTGGAGGTTCCGGTACTCGTACTGG
AACAGCAGCCAGAGCTACGTGCTCACCAAAGGCTGGAGCCGCTTCGTCCGGGAGAAGGGCCTAGGTGCCGGCGAC-----
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>chrUn_1115
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-------------------------------------------------------------------------TCGCGGT
TCAAGGGCGTGGTGCCTCAGCCCAACGGGCGGTGGGGTTCCCAGATCTACGAGCGCCACGCTCGCGTCTGGCTCGGCACG
TTCCCGGACCAGGACTTGGCGGCGCGCGCCTACGACGTAGCCGCGCTCAGGTACCGCGGCCGCGATGCCGCCACCAACTT
CCCGTGCGCGGCCGC---------------------------------------GGAGGCGGAGCTCGCCTTCCTGGGGG
CGCACTCCAAGGCCGAGATCGTCGACATGCTCCGGAAGCACACCTACGCCGACGAGCTCCGCCAGGGTCTGCGACGCGGC
CGCGGCATGGGGGCGCGCGCGCAGCCGACGCCATCGTGGGCGCGGGAGCCCCTCTTCGAGAAGGCCGTGACCCCAAGCGA
TGTCGGCAAGCTCAATCGCCTCGTGGTGCCGAAGCAACACGCCGAGAAGCACTTCCCTCTGAAGCGCACCCCGGAGAGGA
CGACCACCACCGGCAACGGCGTGCTGCTCAACTTTGAGGACGGTGAGGGGAAGGTGTGGAGGTTCCGGTACTCGTATTGG
AACAGCAGCCAGAGCTACGTGCTCACAAAGGGCTGGAGTCGCTTCGTCCGGGAGAAGGGCCTCGCTGCCGGCGACTCCAT
CATCTTCTCGTGCTCGGCGTACG---------------------------------------------------------
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>chr3D_1115
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-------------------------------------------------------------------------TCGCGGT
TCAAGGGCGTGGTGCCGCAGCCCAACGGGCGGTGGGGCTCCCAGATCTACGAGCGCCACGCTCGCGTCTGGCTCGGCACG
TTCGCGGACCAGGACTTGGCGGCGCGCGCCTACGATGTAGCCGCGCTCAGGTACCGCGGCCGCGATGCCGCCACCAACTT
CCCGTGCGCGGCCGC---------------------------------------GGAGCCGGAGCTCGCCTTCCTGGCAG
CGCACTCAAAGGCCGAGATCGTCGACATGCTCCGGAAGCACACCTACGCCGACGAGCTCCGCCAGGGTCTGCGACGCGGC
CGCGGCATGGGGACGCGCGCGCAGCCGACGCCATCGTGGGCGCGGGAGCCCCTCTTCGAGAAGGCCGTGACCCCAAGCGA
TGTCGGCAAGCTCAATCGCCTCGTGGTGCCGAAGCAACACGCCGAGAAGCACTTCCCTCTGAAGCGCACCCCGGAGACGA
CGACCACCACCGGCAACGGCGTGCTGCTCAACTTTGAGGACGGTGAGGGGAAGGTGTGGAGGTTCCGGTACTCGTATTGG
AACAGCAGCCAGAGCTACGTGCTCACAAAGGGCTGGAGTCGCTTCGTCCGGGAGAAGGGCCTCGCTGCCGGCGACTCCAT
CGTGTTCTCGTGCTCGGCGTACG---------------------------------------------------------
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>SNPs
SS-S---------S------------------S-------S---------------------SS----------S-SS--
------S--S-S-----S-----S-----S-----------------S-------S---S-----S--------------
----S--------S--------------S------S-S-------S-----S------------S---S--------S--
------S-------S-----------S-S----S--S-------------------------------------------
-------------------------------------------S---------------------------S----S---
---------------------------------------SS--------------------------S------------
----S----------------------S---------------S---------S----S--SS-S-S-------------
-----------S----------S------------S--------S----------S------------------------
------------S-----------------S---S---------------------------------------------
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-------------------------------S-SSS-SSSSSSSSS-SS-SSS--S-S-S-SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS-------------S--------------------------------------------------
------S-----------------S-------------------------------------S----------------S
----------------------------------S-------------S-------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
-----S---S--------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
---------------------S-S----------------------------------------S---------------
-------------S---------------S------------------S-------------------------------
-S----------------------------------------------------------------------S-------
-------S---------------------------S------------------S-------------S-----------
--------------------------------S------S----S------------S---S----------------S-
--S------S--S----S-SSSS---S--------S------S------------S----S-----S----S--------
------------S-------------S----S--S--S--SSS-------------------------------------
------------------------------S-----------S---S---------------------------------
------S-------------S-----------S----------------S----SSS----S------------S----S
--------------------------------------------------------------------------------
---------------S-S--------------------------------------------------------------
----------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
------------------------------------S--------S----------------------------------
--------------------------------------------------------------------------------
-------S-----------
>forward_1885
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-------------------------AACCTACTCCCTCCGTTCGA-----------------------------------
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>reverse_3202
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-CAGCCATGGTCTTTCTCCCA-----------------------------------------------------------
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-------------------
