>input_sequence_65252
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----------------------------------------------ATGGTTGTTCCGGTGATCGACTTCTCCAAGCTCG
ACCGCGTCGAGAGGGCGGAGACCATGGCGCAGATCGCCGACGGCTGCGAGAACTGGGGCTTCTTCCAGCT----------
----GGTGAACCACGGCATCCCGCTGGAGCTCCTTGACCGCGTCAAG---------------------------------
----------------------------------------------------------------AAGGTGTGCTCCGAGA
GCTACCGCCTCCGGGAGGCGGCGTTCCGGTCGTC-------GGAGCCGGTGCAGACGCTGGAGAGGCTGGTGGAGGCGGA
GCGG---------------------------CGCGGCGAGGCGGTGGCGCCGGTGGACGACATGGACTGGGAGGACATCT
TCTACCTCCACGACGACAACCAGTGGCCCTCCGACCCGCCGGCCTTCAAGGAGACCATGCGGGAGTACCGCGCCGAGCTC
AAGAAGCTCGCGGAGCGGGTCATGGAGGCCATGGACGAGAACCTCGGCCTGGACAAGGGCCGCATGAAGGCCGCCTTCAC
CGGCGACGGCCTCCACGCCCCGTTCTTCGGCACCAAGGTCAGCCACTACCCGCCGTGCCCGCGCCCGGACCTCATCACCG
GGCTCCGCGCGCACACCGACGCCG--------------------------------------------------------
-GCGGCGTCATCCTGCTGTTCCAGGACGACAAGGTCGGCGGCCTCGAGGTGCTCAAGGACGGCGAGTGGC----------
-------------------------------------------------------TGGACGTGCAGCCGCTCGCCGACGC
CATCGTCGTCAACACCGGCGACCAGGTGGAGGTGCTCAGCAACGGCCGCTACCGCAGCGCGTGGCACCGCGTCCTGCCCA
TGCGCAACGGCAACCGCCGCTCCATCGCGTCCTTCTACAACCCGGCGTT-------------------------------
----CGAGGCGGCCATCTCGCCGGC-------------------------------------------------------
----------------------GGTGGGCGAAGGTGGCGCCACCGCGTACCCGGACTACGTGTTCGGGGATTACATGGAC
GTGTACAACAAGCAGAAGTTCGA---------------------------------------------TGCCAAGGAGCC
AAGATTCGAGGCCGTCAAGGCGCCAAAGGCAGCTTAA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr1A_1_TraesCS1A01G089600
AAGGCGGAAGGTGCCTGCACCACCTCCTCCCGTGGCGACGCCTCCCGCTTTGGTGACCGCGGCGGCATAGGGCACCAGTT
CACGCCCCTCACGACGTCGGCCATCTCCAAAGCCATGCACAACCAGCTCCACTGCTGGCCCACCAGCCCCGGGTGGAACG
TGGCCACGGGCTGCCACGCGGCCCCGAAGTGGACGAGCGACGCGTCCGTTTGCTGTCCGCCGCGACCCAAACACGACGCA
TGTTTGCGTTCGAAATGAGTCGGTCCGGACACAAAACGGACCAGATAGGTCCAGGCCATCGCGCGCTGGGCCGTGGGGTC
TGTCCATTTTACCCTAAACGAACGGGGCCGGACAGGATGGGGTCACGCGCTAGAGTTGGCCTAGAAACATGTGAATTCTG
AATGTGCGGTGAAGAACAACCCAGAGGGAAGGTCATTTTAGAGCATTGTAATCGTGAATCTAATATGGTAGCTCATGTGC
TAGTGCAAAATGGATGTGTAGATCCATCAAACTTGTGGTTGAACTCACCTCCGGCATTTATTTTGAAACTCTTAGCGGAC
TATGTAAGTGTTGATTAAATTATAAATAAAGCTAGCCATGATGATCTTTTCTTAAAAAAAACAACCCAGAGGGATAGAGG
TCATTCCTGCCTCTGCCTCAGTCAAGGCTCCTCTACCATTATGGTGTCAGTTAACAAGTCAT--TGACTGGGATATGGAC
TGAG-TGGAGATGCCGGTACCAATTTGCCACAAGCATCCAACGGTTGCTGCTGCGCAGAAGCTTCACATGAACATCTTCC
AGGCCAGCTCCAGTCG-TCGTCTTGACCGGATTTTTGTCTAAAAGTATATTTGCTGACCAGATTATCCCGCCTGGTGCAC
TATAAGTACCATGGCCACCCA--TCTCTCCACCTCATCCCATCACCTGCACTTGCATCCACAAGACTGCACACAACACCA
CACCCGAGTCTGAAACTCTGAAAAAGCTCACCGTCACCAATTCACCATGGTTGTTCCGGTGATCGACTTCTCCAAGCTCG
ACCGCGTCGAGAGGGCGGAGACCATGGCGCAGATCGCCGACGGCTGCGAGAACTGGGGCTTCTTCCAGCT----------
----GGTGAACCACGGCATCCCGCTGGAGCTCCTTGACCGCGTCAAG---------------------------------
----------------------------------------------------------------AAGGTGTGCTCCGAGA
GCTACCGCCTCCGGGAGGCGGCGTTCCGGTCGTC-------GGAGCCGGTGCAGACGCTGGAGAGGCTGGTGGAGGCGGA
GCGG---------------------------CGCGGCGAGGCGGTGGCGCCGGTGGACGACATGGACTGGGAGGACATCT
TCTACCTCCACGACGACAACCAGTGGCCCTCCGACCCGCCGGCCTTCAAGGAGACCATGCGGGAGTACCGCGCCGAGCTC
AAGAAGCTCGCGGAGCGGGTCATGGAGGCCATGGACGAGAACCTCGGCCTGGACAAGGGCCGCATGAAGGCCGCCTTCAC
CGGCGACGGCCTCCACGCCCCGTTCTTCGGCACCAAGGTCAGCCACTACCCGCCGTGCCCGCGCCCGGACCTCATCACCG
GGCTCCGCGCGCACACCGACGCCG--------------------------------------------------------
-GCGGCGTCATCCTGCTGTTCCAGGACGACAAGGTCGGCGGCCTCGAGGTGCTCAAGGACGGCGAGTGGC----------
-------------------------------------------------------TGGACGTGCAGCCGCTCGCCGACGC
CATCGTCGTCAACACCGGCGACCAGGTGGAGGTGCTCAGCAACGGCCGCTACCGCAGCGCGTGGCACCGCGTCCTGCCCA
TGCGCAACGGCAACCGCCGCTCCATCGCGTCCTTCTACAACCCGGCGTT-------------------------------
----CGAGGCGGCCATCTCGCCGGC-------------------------------------------------------
----------------------GGTGGGCGAAGGTGGCGCCACCGCGTACCCGGACTACGTGTTCGGGGATTACATGGAC
GTGTACAACAAGCAGAAGTTCGA---------------------------------------------TGCCAAGGAGCC
AAGATTCGAGGCCGTCAAGGCGCCAAAGGCAGCTTAAG-------CTTAAT--CAAGGAGACTAAAA-GAAAATTATTTA
CT-----TATTAGCTGGCTTTTGTTTTACAATGAAGAAAAAAAAT--GTATTTTTGGAGTTTATTCAGACGCGTAGCAAA
TATGATGTGTGGGGGTAATTGTGATTGGTTCGGTGTCAAA-----TAATTAGGAAATGAAGTATGGATTTTTCATTAGAA
---------------------------------GTATCTGCTTTCTTTACAT----------------------------
--------------------------T-GTTTGATTGTGGTTTTTCCTCTGGTCAGTAACATCGTTCCACCAAATCAGAT
CAACC--------------AAGGATCCCTATAAAAGGAAATTTTGTAGTTCTGGACGAGAAACAGAACATCTCCACAAAC
AGTCAAAAAGATCTCACAGTAAATCTAACAAAGT--CCAAGTCTCTGGACTGTCCCGAATCATGACGCCACTTCACCTTC
ATACAAGGCTGCAGGACGGTCTCGATGTGAATGATTAAGAATAC--TCTCTGATACAAGGTGCTTTATAAATT----AAA
CTGTAGCATGAAGGATATACAACGCATCATTAGCATACATCCAATTGGTGCATGATTAAGAAACATACAAGCAACACCAA
TAAC------------------------------------------GCACATGAGAAAGAATAAGAAAAACACCGGCCAC
AACAAAGCCATAGTAAAACGAAAGTAGGCGAAGGTGAGTAGTGTGGAAGGCCTATCCGTACACTATGCCACCACTCATAA
GGGGTAAAAACATCCCTGACCATTCGCTCCAAACCCATACACATGACCGGAAACAAATGGTTGTTGTTTCAATCGTTGTA
AAGAAGATCACGAATGGAGCCAGTGTATAGACCAGTTGATAGCATGCATAAGTGATGAAGTTTTAGAGTTAAAGAACATG
TCATGATGAAGTTTTAGAGTTAAAGAACATGTCATTTCTATGTAGCCACATCAATCAAATCAAGGCAGCTCTCACCCTTA
TAAACACACTAAAAACTATGAGATGGATATAAGTCAGATCAACGAATGTTTCCCTATAAAAGAATTTGTTTTTTGTTAGT
TGTTCACAAGA------------------------------
>chr4D_1
AAGGCGGGAGGTGCCTGCACCACCTCCTCCCGTGGCGACGCCTCCCGC--------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------TCCGGTGACCGCGGTGGCGTGGGGCA
CCAGTTCA--------CGCCCCCACGGCGCTGGCCATCTCCGGAGCCGTGCACGACCAGCTCCACTGCTGGCCCACCAGG
CCCGGGTGGAACGCGGCCACGGGCTCCTCCTCCATCACCTCCTCCGTCCTCAGCATCTCCAGCTCGGGGATGGCGACGTC
GCCGGCCACAGAAAGGGCCATCATCTCCTCGAAGCCCTCCCATTGGCGCTCATCGTGCGTCTTCATGGAGTCCTCCATGA
CACGCTGCATGAGCCGGGCCTCCTCCTCCGCCGTCATGCGAGGAGGTGGTGGTGGCGACGGAGATGGTGAAGGCGACGGC
GTGGGCGTGAGGCCGCGCACCCGCGTACGCCCGCGCACCTGGGGAGCAGCCACTCGGCGCTCTGGACGTGGCCG------
--------------------------------------------------------------------------------
-----------------------------------------CCGCGGCCCCGACGAGGTTCCGGTGAAGAAAGAGGCGCG
CCGCGTAT---------------------------------------------CGTGCTCGTCCCGGAACCACGTGTCCC
ACAGGTCGGAGTCAGGGGCGTACCTGGGGTCGTAGTACAGGTCGTCCGGCAGGAGGCGGCGGCAGCGCTCGATCTCCTTG
CGCCGCGCACGGCCGCTCAACGGGACCGACGAGATCGGCACCCGGTTGGCGGAGAGATGCCAGTTAGTGGGGAGGTGCAC
GTCACTCCAGGGGAGCGACGTCCTTGTCTCCCAATAACGACGGCATACATCCGCGTGGATGTAGTGCCGGTCGCGCTCGC
CATCGGCCGTGGGGGCGAT-----GGAGAATGTGGGCGGCACGGGGGTCTGACGCGGTGGTGATGCGGGCTCCTCTTTGA
CGCCGTGGCGGCGGCGGCCCGAGGACGAGCCAGCCTCAGAAGCGTGCTTCCCCTTGCGGCCGGTGTTCCAGAACCCCATG
GCTGCGAGGCGGCCGGCCGGCGAGATCGTGGACGGGGAGAGGGAGAGCTAGGGTTTGCGCCGCGTCGGGTTTCAAGGAGG
CGGCACGGGCTGGAGTGGGGAGGGTGGACGACGACCGGTCCACGGCTTCCCATTTAAGAAGGACGGCGGCCGTTCGCCTG
GGCGGATGACAGGTGGGGCCGATCACGCGTGCGCATTAATGTCGGGCGGTGGCAGGTAGGTGGCCGCCTGCCAAGCGGCC
CCGACGCGGACGAGCGACGCG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TCCGTTTGCTGTCCGCCGCGAC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------CCAAACCCAACGCATGTTTGCGCTCGAAATGGGTCGGCCCGGATAC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------AAAACGGACCAGATGGGTCCAGGCCATCACGCGCTGGGCCATCTGGTTTGTCCATTTTGCCCCAAACGGA
CGGGGCCGGACGAGATGGGGTCGCGCGCTGGAGTTGGCCTA
>chr1B_385
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AAACATGTAAATTCTG
AATGTGCGGTGAAGAACAACCCAG--------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------AGGGACAGAGG
TAATTCCTGCGTCTTCCTCAGTCAAGGCTCCTCTGCCAATGTGATGTCAGTTAACAAGTCACACTGACAGGGATATGAAC
TGACATGGAGATGCCGGTACCAATTTGCCACAAGCATCCAACGGTTGCTGCTGCGCAGAAGCTTCACATGAACATCTGCC
AGGCCAGCTCCAGTCGCTCGTCTTGACCGGATTTTTGTCTCAAAATATATTTGTTGACCAG--TATCCCACCTGGTGCAC
TATAAGTACCATGGCCACCCACGTCTCTCCACCTCATCCCATCACCTGCACTTCGCTAGTACATC---CACACAACACCA
CT--CGAGTCTGAAACTCTGAAAAGGCTCATCG--------TCACCATGGTTGTTCCGGTGATCGACTTCTCCAAGCTTG
ACGGCGCCGAGAGGGCCGAGACGATGGCGCAGATCGCCGACGGCTGCGAGAACTGGGGCTTCTTCCAGCT----------
----GGTGAACCACGGCATCCCTCTGGAGCTTCTTGACCGCGTCAAG---------------------------------
----------------------------------------------------------------AAGGTGTGCTCCGAGA
GCTACCGCCTCCGGGAGGCGGCGTTCCGGTCGTC-------CGAGCCGGTGCAGACGCTGGAGAGACTGGTGGACGCGGA
GCGG---------------------------CGCGGCGAGCCGGTGGCGCCAGTCGACGACATGGACTGGGAGGACATCT
TCTACCTCCACGACGACAACCAGTGGCCGTCCGACCCGCCGGCCTTCAAGGAGACCATGCGTGAGTACCGCGCCGAGCTC
AAGAAGCTCGCGGAGCGGGTCATGGAGGCCATGGACGAGAACCTCGGCCTCGACAAGGGCCGCATGAAGGCCGCCTTCAC
CGGCGACGGCCTCCACGCGCCGTTCTTCGGCACCAAGGTCAGCCACTACCCGCCGTGCCCGCGGCCGGACCTCATCACCG
GGCTCCGGGCGCACACCGACGCTG--------------------------------------------------------
-GCGGCGTCATCCTGCTGTTCCAGGACGACAAGGTCGGCGGTCTTGAGGTGCTCAAGGACGGCGAGTGGC----------
-------------------------------------------------------TCGACGTGCAGCCGCTCGCCGACGC
CATCGTCGTCAACACCGGCGACCAGGTGGAGGTGCTCAGCAACGGCCGCTACCGCAGCGCGTGGCACCGCGTCCTGCCCA
TGCGCAACGGCAACCGCCGCTCCATCGCCTCCTTCTACAACCCGGCGTT-------------------------------
----TGAGGCGGCCATCTCGCCGGC-------------------------------------------------------
----------------------GGTGGGCGAAGGCCGCGCTGCCGCGTACCCAGACTACGTGTTTGGGGATTACATGGAT
GTGTACAACAAGCAGAAGTTCAA---------------------------------------------TGCCAAGGAGCC
AAGATTCGAGGCCGTCAAGGCGCCAAAGGCAGCTTAAG-------CTTAATATCATGGCGATTACAC-GACAACTATTTA
CC-----TATTAGCTGGCTTTTGTTTTACAATGAAGAAAAAAAAA--GTGTTTCTGG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr1D_617
AAG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AACAACCCAGAGGGATAGAGG
TCATGCCTGCCTCTGCCTCAGTCAAGGCTCCTCA-------------------------CAT--TGACAAGGATATGAAC
TGACATGGAGATGCCGGTACCAATTTGCCACAAGCATCCAACGGTTGCTGCTGCGCAGAAGCTTCACATGAACATCTGCC
AG-----------TCGCTCGTCTTGACCGGATTTTTGTCTCAAAATATATTTGTTGACCAGATTCTCCCACCTGGTGCAC
TATAAGTACCATGGCCACCCACATCTCTCCACCTCATCCCAGCACCTGCACTTACATCCACAAGACTGCACACAACACCA
CACCCGAGTCTGAAACTCTGAGAAGCTCAT-CGTCACCAATTCACCATGGTTGTTCCGGTGATCGACTTCTCGAAGCTCC
ACGGCGCCGAGAGGGCGGAGACCATGGCCCAGATCGCCGACGGCTGCGAGAACTGGGGCTTCTTCCAGCT----------
----GGTGAACCACGGCATCCCGCTGGAGCTCCTTGACCGCGTCAAG---------------------------------
----------------------------------------------------------------AAGGTGTGCTCCGAGA
GCTACCGCCTCCGGGAGGCGGCGTTCCGGTCGTC-------CGAACCCGTGCAGACGTTGGAGAGGCTGGCGGAGGCGGA
GCGG---------------------------CGCGGCGAGGCGGTGGCGCCCGTGGACGACATGGACTGGGAGGACATCT
TCTACCTCCACGACGACAACCAGTGGCCCTCCGACCCGCCGGCCTTCAAGGAGACCATGCGGGAGTACCGCGCCGAGCTC
AAGAAGCTCGCGGAGCGCGTCATGGAGGCCATGGACGAGAACCTCGGCCTGGACAAGGGACGCATGAAGGCCGCCTTCAC
CGGCGACGGCCTCCACGCGCCGTTCTTCGGCACCAAGGTCAGCCACTACCCGCCGTGCCCGCGCCCGGACCTCATCACCG
GGCTCCGCGCGCACACCGACGCCG--------------------------------------------------------
-GCGGCGTCATCCTGCTGTTCCAAGACGACAAGGTCGGCGGCCTTGAGGTGCTCAAGGACGGCGAGTGGC----------
-------------------------------------------------------TCGACGTGCAGCCGCTCGCCGACGC
CATCGTCGTCAACACCGGCGACCAGGTGGAGGTGCTCAGCAACGGCCGCTACCGCAGCGCGTGGCACCGCGTCCTGCCCA
TGCGCAACGGCAACCGCCGCTCCATCGCGTCCTTCTACAACCCGGCGTT-------------------------------
----CGAGGTGGCCATCTCGCCGGC-------------------------------------------------------
----------------------GGTGGGCGAAGGCGCCGCCGCCGCGTACCCGGACTACGTGTTCGGGGATTATATGGAC
GTGTACAACAAGCAGAAGTTCGA---------------------------------------------GGCCAAGGAGCC
AAGATTCGAGGCCGTCAAGGCGCCAAAGGCAGCTTAAG-------CTTAATATCATGGCGATTAAAC-GAAAATTATTTA
CC-----TATTAGCTGGCTTTTGTTTTACAATGAAGAAAAAAAATTGTG-TTTTTGGAGTTTACTCAGACGCGTAGCAAA
TATGATGTG---GGAAAAATGTGATTGGTTCGGTGTCAAATAGAGTAATTAGGAAATGAAGTATGGATTTTTCATTAGAC
TAGAACAATGCCCGTGCGTTACAACGGAGTATAAATATTCGAATACATTAACTTGTGATTTATCTGTCAATAATAATATA
ATTGTCATTAGACTAGAACAATATCCTTATTTGATTGTGGTTTTTCCTCTCCTTAGTAACATCGTTACACCAAGTCAGAT
CAAC-------------GAAAGGATCCCTACAAAAGGAAATTTTGTAGTTCTTGACGAGAAACAGAACATCTCCACAAAC
AGTCATGAAGATCTCACAGTAAATCTAACAAAGT--CCAAGTCTCTGGACTGTCCCGAATCATGACGCCACTTCACCTCC
ATACAAGGCTGTAGGACTGTCTCGATGCGAACGATTAACAATAC--TTTCTGATACAAGGTGCTTTATAAATTAACGAAA
CTGTAGCATGAAGGATATACAACGCATCATGAGCATACATCCGGTTGCTGGATGATTAAGAAACATACAAGCAACACCAA
TAAC------------------------------------------GCATATGAGAAAGAATAAGAAAAACACTGGCCAC
AACAAAGCCATAGTAAAATGAAACTAGG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr1A_986
CGTCAAGAAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------TTCACCATGGTTGTCCCGGTAATCGACTTCTCCAAGCTCG
ACGGCGCCGAGAGGGCGGAGACCATGGCGCAGATCGCCGACGGCTGCGAGAACTGGGGCTTCTTCCAGCT----------
----GGTGAACCACGGCATCCCGCTGGAGCTACTTGACTGCGTCAAG---------------------------------
----------------------------------------------------------------AAGGTGTGCTCCGAGA
GCTACCGCCTCCGGGAGGCGGCGTTCCGGTCGTC-------CGAGCCCGTGCAGACGCTGGAGAGGCTGGTGGAGGCGGA
GCGG---------------------------CGCGGCGAGGCGGTGGCGCCCGTGGACGACATGGACTGGGAGGACATCT
TCTACCTCCACGACGACAACCAGTGGCCCTCCGACCCGCCGGCCTTCAAGGAGACCATGCGGGAGTACCGCGCCGAGCTC
AAGAAGCTCGCGGAGCGGGTCATGGAGGCCATGGACGAGAACCTCGGCCTGGACAAGGGCCGCATGAAGGCCGCCTTCAC
CGGCGACGGCCTCCTCGCGCCGTTCTTTGGCACCAAGGTCAGCCACTACCCGCCGTGCCCGCGCCCGGACCTCATCACCG
GGCTCCGCGCGCACACCGACGCCG--------------------------------------------------------
-GCGGCGTCATCCTGCTGTTCCAGGACGACAAGGTGGGCGGCCTCGAGGTGCTCAAGGACGGCGAGTGGC----------
-------------------------------------------------------TGGACGTGCAGCCGCTCCCCGACGC
CATCGTCGTCAACACCGGCGACCAGGTGGAGGTGCTCAGCAACGGCCGCTACCGCAGCGCGTGGCACCGCGTCCTGCCCA
TGCGCAACGGCAACCGCCGCTCCATCGCGTCCTTCTACAACCCGGCGTT-------------------------------
----CGAGGCGGCCATCTCGCCGGC-------------------------------------------------------
----------------------GGTGGGGGAAGGCGCCGCCGCCGCGTACCCGGACTACGTGTTCGGGGATTACATGGAT
GTGTACAACAAGCAGAAGTTCGA---------------------------------------------TGCCAAGGAGCC
AAGGTTCGAGGCCGTCAAGGCGCCAAAGGCAGCTTAAG-------ATTAAT--CAAGGAGATTAAAA-GAAAAATATTTA
CC-----TATTAGCTGGCTTTTGTTTTACAATGAAGAAAAAAAAAAGGTAATTTTGGAGTTTATTCAGACGCGTAGCAAA
TATGATGTGTGGGGATAATTGTGATTGGTTCGGTGTCAAA-----TAATTAGGAAATGAAGTATGGATTTTTCATTGAAA
AAGTATCTGATTTTTT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------
>chr1D_986
CGTCAAGAAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------TTCACCATGGTTGTCCCGGTCATCGACTTCTCCAAGCTCG
ACGGCGCCGAGAGGGCCGAGACCATGGCGCAGATCGCCGACGGCTGCGAGAACTGGGGCTTCTTCCAGCT----------
----GGTGAACCACGGCATCCCGCTGGAGCTTCTTGACCGCGTCAAG---------------------------------
----------------------------------------------------------------AAGGTGTGCTCCGAGA
GCTACCGCCTCCGGGAGGCCGCGTTCCGGTCGTC-------CGAGCCGGTGCAGACGCTGGAGAGGCTGGTGGAGGCGGA
GCGG---------------------------CGCGGCGAGGCGGTGGCGCCGGTGGACGACATGGACTGGGAGGACATCT
TCTACCTCCACGACGACAACCAGTGGCCCTCCGACCCGCCGGCCTTCAAGGAGACCATGCGGGAGTACCGCGCCGAGCTC
AAGAAGCTCGCGGAGCGGGTCATGGAGGCCATGGACGAGAACCTCGGCCTGGACAAGGGCCGCATGAAGGCCGCCTTCAC
TGGAGACGGCCTCCACGCGCCATTCTTCGGCACCAAGGTCAGCCACTACCCGCCGTGCCCGCGCCCGGACCTCATCACCG
GGCTCCGCGCGCACACCGACGCCG--------------------------------------------------------
-GCGGCGTCATCCTGCTGTTCCAGGACGACAAGGTAGGCGGCCTCGAGGTACTCAAGGACGGCGAGTGGC----------
-------------------------------------------------------TCGACGTGCAGCCGCTCCCCGACGC
CATCGTCGTCAACACCGGCGACCAAGTGGAGGTGCTCAGCAACGGCCGCTACCGCAGCGCGTGGCACCGCGTCCTGCCCA
TGCGCAACGGCAACCGCCGCTCCATCGCGTCTTTCTACAACCCGGCGTT-------------------------------
----CGAGGCGGCCATCTCGCCGGC-------------------------------------------------------
----------------------GGTGGGCGAAGGCGCCGCCGCCGCGTACCCGGACTACGTGTTCGGGGATTACATGGAC
GTGTACAACAAGCAGAAGTTCGA---------------------------------------------TGCCAAGGAGCC
AAGGTTCGAGGCCGTCAAGGCGCCAAAGTCAGCTTAAGGCTTAAGCTCAAT--CAAGGAGATTAAAAAGGAAATTATTTA
CC-----TATTAGCTGGCTTTTGTTTTACAATGAAGAAAAAAAAT--GTATTTTTG-AGTTTGCTCAGACGCGTAGCAGT
ATGA---TGTGGGGATACTTGTGATTGGTTCGGTGTCAAA-----TAATTAGGAAATGAAATATGGATTTTTCGTTGGAA
---------------------------------GTATCTGCTTTCGTTACAT----------------------------
--------------------------TTGTTTGATTGTGCTTTATCATTTGATCAGTACATCAT---------------T
CCAC-------------GAATGTTTCCTTGTAAAAGAAAATTTTGTAGTTA-TGACAAGAAACAAAAGATCTCCACAAAC
AGTAAAGTACATCTCACAATTAATCTAACAAAAGTCCCAAGTCTCTGGACTGTCCCGAAACGTGATGCCACTTCACCTTC
ATACAAGGCTACAGTACTGTTTCAATGTGAATGACAAGCCGTATTTTTTTTTATACAAGGTGCTTTATAAATT----GAA
ATGTAGCATCAAGGATATATAACACATCATGAGCATACATCCAGTTGCTGCA----TAAGAAACATACAAGCAACAACAA
TAAGGCACATGAGAAACCCTGCAAAAAATAAAAATAAAAAAATAAGGCACATGAGAAAGAATAAGAAAAACACCGGCCAC
AATAAAGTCATAGTAAAACGAAACTAGGCGAAGGCGAGTAGTGTGAAGGGCCTATTCGTACACTATGCCACTACCCATAA
GGGGTAAAAACATTCCTGGCCATCCGCTCCAGACCCATACACATGACAGACC---AATGGTTGATGTTTCAATCGTTGCA
AAGAAGATCACGAACGGAGCCAGTGCATAGACCAGTTGATAACATGCATAAGTGA-------------------------
------TGAACTTTTAGAGTTAAAAAACATGTCATTTCTATGTAGCCACATCAATCAATTCATGGCAGCTCTCACCCTTA
TAAACGCACTAAAAACTACGAGATGGATATAAGTCATATCGACGAGTGTTTCCCTATAAAAGAATATGTTTTTTGTTAGT
TGTTGACAAGA------------------------------
>chr1B_995
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TTCACCATGGTTGTCCCGGTGATCGACTTCTCCAAGCTCG
ACGGCGCCGAGAGGGCGGAGACCATGGCGCAGATCGCCGACGGCTGCGAGAACTGGGGCTTCTTCCAGCT----------
----GGTGAACCACGGTATCCCACTGGAGCTTCTTGACCGCGTCAAG---------------------------------
----------------------------------------------------------------AAGGTGTGCTCCGAGA
GCTACCGCCTCCGAGAGGCGGCGTTCCGGTCGTC-------CGAGCCGGTGCAGACGCTGGAGAGGCTGGTGGAGACGGA
GCGG---------------------------CGCGGCGAGGCGGTGGCGCCGGTGGACGACATGGACTGGGAGGACATCT
TCTACCTCCACGACGACAACCAGTGGCCGTCCGACCCGCCGGCCTTCAAGGAGACCATGCGGGAGTACCGCGCCGAGCTC
AAGAAGCTCGCGGAGCGGGTCATGGAGGCCATGGACGAGAACCTCGGCCTCGACAAGGGCCGCATGAAGGCGGCCTTCAC
CGGCGACGGCCTCCACGCGCCGTTCTTCGGCACCAAGGTCAGCCACTACCCGCCGTGCCCGCGCCCGGACCTCATCACCG
GACTCCGGGCGCACACCGACGCTG--------------------------------------------------------
-GCGGCGTCATCCTGCTGTTCCAGGACGACAAGGTCGGCGGCCTTGAGGTGCTCAAGGACGGCGAGTGGC----------
-------------------------------------------------------TGGACGTGCAGCCGCTCCCCGACGC
CATCGTCGTCAACACCGGCGACCAGGTGGAGGTGCTCAGCAACGGCCGCTACCGCAGCGCGTGGCACCGCGTCCTGCCCA
TGCGCAACGGCAACCGCCGCTCCATCGCGTCCTTCTACAACCCGGCGTT-------------------------------
----CGAGGCGGCCATCTCGCCGGC-------------------------------------------------------
----------------------GGTGGGCGAAGGCGCCGCCGCCGCGTACCCGGACTACGTGTTTGGGGATTACATGGAT
GTGTACAACAAGCAGAAGTTCGA---------------------------------------------TGCCAAGGAGCC
AAGATTCGAGGCCGTCAAGGCGCCAAAGGCAGCTTGAT-------TTTAAT--CAAGGAGATTAAAA-GGAAATTATTTA
CTCTACCTATTAGCTGGC-TTTGTTTTACAATGAAGAAAAAAATT--GTATTTTTGGAGTTTATTCAGACGCGTAGCAAA
TATGATGTGTGGGGATAATTGTAATTGGTTCGGTGTCAAA-----TGATTAGGAAACGAAGTATGGATTTTTCATTGAAA
AAGTATCTGCTTTTTTGAGGGGTAATATTGAAAGTATCTGCTTTCTTTACA-----------------------------
--------------------------TTGTTTGATTGTGATTTATCCTCTGATCAGTACATCGT---------------T
CCACAAGTGAGATCAAGGAAAGTTTCTCTATAAAAGGAAACCTTGTAGTTTTTGACAAGAAACAGAAGATCTCCACCAAC
AGTCGAAAAGATCTCACA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>SNPs
------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-------
------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
----------------------------------S---S-S--S------------------------S--------S--
---S-------------------------------------------------------------------------S--
----------------------------------------S---S--------S---------------S----------
-----------------------------------------------------S--------------------------
------------------------S-----S-------------------------------------------------
--S---S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S--------------S------S------
----S-----------------------------------------------S---------------------------
--------------------------------------------------------------------------------
-----------------S--------------------S--------S--------------------------------
------------------------------S------------S---S--------------------------------
--------------------------------------------------------------------------------
-----------------------S----------S----------S-S-------S---------------S--S-----
-------------S----S----S-----------------------S--SSSS---------S--------------S-
--------------S----------S---------------S-------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS----S-------------S---------------------------------S---S-----------------
-----S------------S-----------------S---S----S----------------------------------
----S------------------------------------
>forward_348
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TTACCCTAAACGAACGGGGC----------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------
>reverse_2692
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GTCAGTAACATCGTTCCACCA--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
