>input_sequence_65234
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-----------------ATGGCGCGAGGAATTGACGCCGAGCAGCAGCACACGATGGCGGAGCAGGTGAAGGAGTATCAG
GCGCGATCCAGGCACGCCTGGGCCGCCGCATCCTTCTTCTCCTCCACCTCCACCTCCACCTCCACCTCCACGGCCGGCTC
CTCGTGGTAAGCAAGCGCCAACCCTAAGCCATCCCGTTTCTTCTCACAAGCCTGAGTATTATGTTTCGATATTACCAAGT
TGAGGATGAATTAAGTGACCATACAGGGAAAATCGGCCATTATTCTGTTAGCTAGGTA--AGGTTAACAAAGCGAGTAAC
AGCCATAGTTCTGCATCTTGC----GCTAGTGTCTT-----------CCCAATTGCTTCTGTTCTCAGAATTACAGGCTA
AACAAGATGGCGGTTTCACTTTTCATTGACTGCTGTATAAATGAACCAAGCAAAATGATCATTGTAAGCTAAATCTCAAG
AGGGACACCTCATGTAAACAAGCCTTGATTGC---TAGTGTTTAGTGCGAAAGCACTATCTCAAAGTTGTTCCATAACAA
TGAAAGCAAAATAAACAACGGGCATATCAACTTGTTCTATATTTACAAGTTTCTTTTGACATACGACAACATGAATATTC
AGGATTGTTATAAGTTCTTTTCTTAGGAAGAGATTATTTTCATGTCTCTCCTTATTTGCCCTACGG-TT-AAATTATTGC
TCGCATCCTGACTTCCACAACAATTTTATGTTGGTTGCTGCAGGGTTGAGGTGTTACTCATGATATGGAAACTTGCTTTG
TATGCTCTACTAGTGTTTGCGTGTATTGCCTTTTATTTCAAGTTTATAGGAATAGCTTTATCATTTACATGTATTTCTGC
ACTTCTTTATTTGTGCATGAGATTAACCAAGGAAGAAAGGAAGCACAAGAAAAGTAAGCAAAGAATGCTTCTTTCATTGT
CAATGTAA------------------------------------------------------------------------
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>chr7D_1_TraesCS7D01G226500
GACGGGCTGGTTGAACAGATTAAATGTGACGAGTGCCAATGGCGTCATGTCAGCACTACGTGCCTAGATCACCTTGTCGT
CTAGGTCGTACATGGTGGCCTGGGTGTATGTGTTTGCCCTTGAGTCTTGGTTGTTGCGTCTTGTTGGGTTGTGTTTTTCC
CCTTTGCCTCGTTGTTGTTGGTTTTTTCTTCTGTCTTTGGCTAAGACTTTGTACTTCTTTTCTCCTACTATAACATTTTA
TTC-TTTTTTATATTAAACAAACTCTTGTCTTATTCGCATTAGACAAAATAAAGTGGAAAATAAATTCAGAATTATAATG
TACATATTTTTGCTCAACT-TTTTGAAACTAACTCTCATACGTCCCATGGCGACATCGGAATCGCCTCGACGAACAACAC
GAAGACACTGAAACCTAATAAGCTAGACCTAAAGTCCCCGCACAACTCCACGGTCCCGTGCGTTCCATTCCGGAAAATCG
GACGTTGGAGACGAGGAAAAACAGCGGAACAATCGGCAGGGAAGTGGGCTTTGTGTCCGCTAGGGTTTTTCCTAGGTTAC
GAAGGAAAGGTACTCCTATGGAATTCCATGCAAAAAAATCTATGATTTTTTACTGAAAATAATTTCTATGTTTTTTTATC
CTGCAAATTAAACAAACTCTGTCCCTGCAAAAATAATAATTAAACAAATGCTGTAGAAATGATTCCTAAGGAATATAGTC
TGTACCCCACAAAAAAAAGG------------------------------------------------------------
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----------------------------------AATATAGTCTCTCTCTTTTTTGTAGAACTGTAAGGAATATAGTCTT
CTCCCTGGGAATTTAGAACCGAAAGAGGCCTTAAAATCTGTAAAAAATTGCTGATGACGTGGTGGCCCAAAGCCGAACGT
GCTTGGCCCAAAGCAG---AGGCGATCGAT--CCCACCATGGCACCATTTCCTCTTCGATTGTCTCAAAAAAAAACCATT
TCGTCTTCGATCC-----------------------------------GGACCAACTCCGTCGCCGTCGCCGTTGGGCGT
CGGAATCCATGGT-GGGATGGCGCGAGGAATTGACGCCGAGCAGCAGCACACGATGGCGGAGCAGGTGAAGGAGTATCAG
GCGCGATCCAGGCACGCCTGGGCCGCCGCATCCTTCTTCTCCTCCACCTCCACCTCCACCTCCACCTCCACGGCCGGCTC
CTCGTGGTAAGCAAGCGCCAACCCTAAGCCATCCCGTTTCTTCTCACAAGCCTGAGTATTATGTTTCGATATTACCAAGT
TGAGGATGAATTAAGTGACCATACAGGGAAAATCGGCCATTATTCTGTTAGCTAGGTA--AGGTTAACAAAGCGAGTAAC
AGCCATAGTTCTGCATCTTGC----GCTAGTGTCTT-----------CCCAATTGCTTCTGTTCTCAGAATTACAGGCTA
AACAAGATGGCGGTTTCACTTTTCATTGACTGCTGTATAAATGAACCAAGCAAAATGATCATTGTAAGCTAAATCTCAAG
AGGGACACCTCATGTAAACAAGCCTTGATTGC---TAGTGTTTAGTGCGAAAGCACTATCTCAAAGTTGTTCCATAACAA
TGAAAGCAAAATAAACAACGGGCATATCAACTTGTTCTATATTTACAAGTTTCTTTTGACATACGACAACATGAATATTC
AGGATTGTTATAAGTTCTTTTCTTAGGAAGAGATTATTTTCATGTCTCTCCTTATTTGCCCTACGG-TT-AAATTATTGC
TCGCATCCTGACTTCCACAACAATTTTATGTTGGTTGCTGCAGGGTTGAGGTGTTACTCATGATATGGAAACTTGCTTTG
TATGCTCTACTAGTGTTTGCGTGTATTGCCTTTTATTTCAAGTTTATAGGAATAGCTTTATCATTTACATGTATTTCTGC
ACTTCTTTATTTGTGCATGAGATTAACCAAGGAAGAAAGGAAGCACAAGAAAAGTAAGCAAAGAATGCTTCTTTCATTGT
CAATGTAAAATATGTCTGTAAATTTCGCTGTAATTTACATGTAAAGTGCTCTCAGTTTAATACTA-ATGTATTTACACTC
TCGACGTCTTTCATATACCATTTTCTCTTCAGTTAGTTGTATCAATTGGCCCGCAATAAATTG-TCTGATGTTTAGTGTT
TACGATGTACAGTCGCGG--------------TATTAACTGGTTTATCGTTACTTGAACTCATCTTGGGTCGCCCACTTG
TTGAAGTTGGATACTAATTTGATCTGAATCAACTATTTAGCCAGTC----------AGCTACTATGTACTTATTGAAATC
CAATGCTGACTGGATCACTTATATTTGGTCGGA-TTTTCAGTAGTGTTCTAATTTATTGTTCACTGGCCTGACCGAATAT
AGGCAAAAGATTTGAATGGTGTATTCCTGAGTTAATTGTGATTCATAGACTTGTTTGGCATCCTTATTGATGCCGAGTTA
ACTGACACATATTGATATATGATCTTTTGCTTTTAAACGTTTCAGTTTCTTAATTGATAATTTGATTATCCTTCAAAATT
TGCGATGTTTCTAGAATGAAAAATTCCAACCAAATGTAGTTGAGGTGAACCACTGAACGAA------------ATAATAG
GCGCACATGCATTATACTGAGCTCTATGGCGAAGGTTATGAGTCATTTTTGTATGCTCTTTGTATTTCACTCTATTTTGT
GTATATGAATTGTTACTTATTAGTTTCTCTTTTTGACATCAATTGTTACTTATTAGTTAATCGAACAGTTTGTCACGTAT
AAGAAACGTAGGCCAGCATTCAGTAG---------CTGTTTTGTGGTTTCATTAAGATGCGGACCGTCTAGCGATGAGGG
CCTACGTTTCATGCTGTTCGTTCTGTTGTGATCAGGTCCTCGAGTCGGCTGCCCGTCTCATGCTGACCTGCCCATTGGCA
TGGCCAAAGTTTGGCTCTGCTTTCATCTAACTGATCCAAGAGCTGCTGGTGCTGGCACAACGTCGATGACAATCAAGGGC
TGGTGGAGAAGGAGCT
>chr7A_48
TGC-----------------------------------------------CAGCTCTACGTGCCTAGATCACCTTGTCGT
CTAGGTCGTGCATGGTGGCCTGAGTGTATGCGTGTGCCCTCGAGTTTTTGTTGTAACGTCTGGCTAGGTTGCGTTTCCCC
CCTTTGCCTCGTTGTTGTTGGTTTTTTCTTGTGTCTTTGGCTAGGACTTTGTACTTATTTTCTCCTACTACAACATTTTA
TTTATTTTTTACATTAAAAAAATTCTTGTCTTATTCGCATTGGACAAAATGAAGTAAAAAAT-AATTCAGAATTACAATG
TACATATTTTTGCTCCACTATTTTGAAACTAACTCTCATGCATCCCATGGCAACGTCGGAATCGCCTGGACGAACAACAC
GAAGACACTGAAACCTAACAAACTAGACCTAAAGTCCCTGTGCAACTCCATGATCCCGTGCGTTCCAGCGTGGAAAATCG
GAAGTCGGAGACGAGGAAAACAGCGGAACGGCCGTT-AGGGAAGTGGGCTTTGTGTCCGTTAGGGTTTTTCCTAGGTTAC
GGA------GTACTCCTATGGAATTCCATGT-AAAAAATCTATATATTTTTACAGAAAATATTTTCTATGCTC-TTTATC
CTGCAAATTAAACAAACCCTTTAA--------------------------------AAATAATTCCTAAGGAATGTAGTC
TGTGCCTCACAAAAAGAGGAATATAATCTGGACGTCGTTTTTCTGATCCCGAGCTCACATGAGCTAGGGTGAACAGTAAA
ATAAAAAAATGAAAACAATTTCAGAAAATTCCGAATTTTTTTATGTGAAACTTTGACAAATGTTTTGATAGTTTGCAAAA
TCTCATGTGACCTCGGAATTAGAACATCACTTTCAATATAGTCTGTCCTTTTTTAG----ACTGTAAGGAATATAGTCGT
CTCCCTGGGAATCTAGAACCAAAAGAGGCCTTAAAATCTGTAAAAA-CTGCTGATGACGTGGTGACCCAAAGCCGAATGT
GCTTGGCCCAAAGCAG---AGGACATCGAT--CCC---------CCATTTCCTCTTCGAC--------------------
-----------CC-----------------------------------GGACCAACTCCGTCGCCGTCGCCGTTGGGCGT
CGGAATCCGGAAGCGAGATGGCGCGAGGAGTGGACGCCGAGCAGCAGCACCCCATGGCGGAGCAGGTGAAGGAGTATCAG
GCGCGATCCAAGCAAGCCTGGGCAACCGCATCCTTCTTCTCCTCCACCTCCG------------CCTCCACGGCCGGCTC
CTCGTGGTACGCAAGCGCCAACCCTAAGCCATTCCGTTTCT-CTCACAAGCCTGAGTGTTATGTTTCGATATTACCAAGC
TGAGGATGAATTAAGTGACAATACAAGGAAAATCGGCCATTATT----------------AGGTTAACAAAGGGAGTAAC
AACCATAGTTCTTCATCTTGTTGTAGCTAGTGCTGGATTGTTACCTGCCCAATTGCTTCTGTTCTCAGGATTACAGGCTA
AACAAGATGGCAGTTTCACTTTTCATTGACTGCTGTATGAATGAACCGAGCAAAATGATCATTGTAAGCTAAATCTCAAG
AGGGACACCTCATATAAACAAGCCCTGATTGCTAGTAGTGTTTACTGCGAAAGCACTATCTCACAGTTGTTCCATAACAA
TCAAAGCAAAATAAACGACGGGCCTACCAACCTGTTCTATATTTACAAGTTTCTTTTCACATAAGACAACATGAATATTC
AGGATTGTCAGAAATTCTCTTCTTAGGAAGAGATCATTTTCATGTCTCTCCTCATTTGCACTACAGTTT-AAATTATTGC
TCGCATCCTGACTTCCGCAACTATTTTATGCTGGTTGCTGCAGGGTTGAGGTGCTCCTCGTGATATGTGAACTTGCTTTG
TATGCTCTACTAGTGTTCGCGTGTATTGCTTTTTATTTCAGGTCCATAGGAATAGCTTTATCCTTTACATGTATTTCTGC
ACTTCTTTATCTGTGCATGAGATTAACCAAGGAAGAGAGGAAGCACAAGAAAAGTAAGCAAAGAATGCTTCTTCCATTGT
CAATGTAAAATACGTCTGTAAATTTCTCTGTAAT-TACATGTGAAATGCTCTCAGTTTAATACTAGATATATTTACGCTC
TCGGCGTCTTTCATATACTATTTTCTCTTCAGTTAGTTGTATCAATTGGCCCGCAATAAATTGTTCTGATGTTTAGTGTT
TAGGATATATAGTCCGGATACCAATATTCGGATATTGACTGGTTTATCTTTACTTGAACTCATCTTGGGTCGGCTACTTG
TTAAAGTTGGATACCAATTTGATCTAAATCAACTATTTAGCCAGTT----------AACTACTATGTACTTATTGGAATC
CAATACTGATTGGATCACTTATATTTAGTCAGA-TTTCAGTAATGC-TCTAACTTATTGTTCACTGGCCTGACCAAATAT
AGGCAAAA-ATATGAATGGCGTATTTCTGAGTTAATTGTGTTTCATAGACTTGTTTGGCATCCTTATCGATGCCAAGTTA
ACTGACATATATA--C------TCTTTTGCTTTTAGACGTTTCAGTTTCCCAATTGATAATTTGATTATCCTTCAAAATT
TGCGATGTTTCTAGAATGAAGAATTCCAACCAGATGTAGTTGAGGTGAACCGCTGAACGAAATGTAACAACCAATAATAG
GTGCACATGCATTATACCGAGCT-TATGGCGAAGGTTATGGGTCATTTTTGTGTGCTCTTTGTATTTCACTCTATTTTGT
GTGTATGAGTTGTTATTTATTAGTTAATCAT---------------------------------ACAGTTTGTCAAATAT
AAGAAACGTAGGCCAGCATTTAGTAATAATAATACCTATTTTTTGGTTTCATTAAGATGCGGACAGTCTAGCGATGAGGG
CCTACGTTTCATGCTGTTCGTTCTG---TGATCAGGTCCTCGAGTCGGCTGCCAGTCTCATGCTGACCTGCCCATTGGCC
TGGG--AAGTTTGGCTCTGCTTTCATCAAACTGATCCAAGAGCTGCTGGTGCTGGCACAACGTCGATGACAATCAAGGGC
TGGTGGAGAAGGAGCT
>chr7B_801
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----------------AACCGAAAGAAGCCGTAAAAGCTGTAAAAA-TTGCTGATGCCGTGGTGGCCCAAAGCCGAACGT
GCTTGGCCCAAAGCAGCAGAGGCGATCGATTCCCC---------CCATTTCCTCTTCGAC--------------------
-----------CCATTTCTCCAAACAAAAAAAAAAACCTCTTCGACCCGGACCAACTCCGTCGCCGTCGCCGTTGGGCGT
CGGAATCCAGAAGGGGGATGGCGCGAGGAATTGACGCCGAGCAGCAGCACCCCATGGCGGAGCAGGTCAAGGAGTATCAG
GCGCGATCCAGGCACGCCTGGGCAGCCGCATCCTTCTTCTCCTCCACCTCCAC------CTCCACCTCCACGGCCGGCTC
CTCGTGGTAAGCAAGCGCCAACCCTAAGCCATTCCGTTTCTTCTCACAAGCCTGAGTATTATGTTTCGATATTGCCAAGT
TAAGATGAATTTAAGTGATCATACAGGACAAATCGACCATTATGCTGTTAGCTAGGTATAAGGTTAACAAAGGGAGTAAC
AGCCATAGTTCTTCATCTTGTTGTAGCTAGTGTTGGATTGTTACCTGCCCAATTGCTTCTGTTCTCAGGATTACAGGCTA
AACAAGATGGCAGTTTTGCTTTTCATTGACTGCTGTATAAATGAACCAAGCAAAATGATTATTGTAAGCTAAATCTCAAG
AGGGACACCTCATGTAAACAAGCCCTGATTGC---TA-TGTTTAGTGCGAAAGCACTATATCACAGTTGTTCCATAACAA
TGAAAGCAAAATAAACAACGGGCATACCAACTTGTTCTATATTTACAAGTTTCTTTTGACATACGACAGCATGAATATTC
AGGATTGTTAGAAGTTCTCTTCTTAGGAAGGGATTATTTTCATGTCTCTCCTTATTTGCACTACAGTTAAAAATTATTGC
TCGCATCCCGACTCGCACAACTATTTTATGTTGGTTGCTGCAGGGTTGAGGTGTTCCTCGTGATATGGGAACTTGCTTTG
TATGCTCTACTAGTGTTCGCGTGTATTGCTTTTTATTTCAGGTCCATAGGGATAGCTTTATCCTTTACATGTATTTCTGC
ACTTCTATATTTGTGCATGAGATTAACCAAGGAAGAGAGGAAGCACAAGAAAAGTAAGCAAAGAATGCTTCTTCCATTGT
CAATGTAAAATATGTCTGTAAATTTCTCTGTAAC-TACATGTGAAATGCTCTCAGTTTAATACTCAATATATTTACGCTC
TCGGCATCTTTCATATACTATTTTCTCTTCAGTTAGTTGTATCAGTTGGCCCGCAATAAATTGTTCTGATGTTTAGTGTT
TAGGATATATAGTCTGGATACCAATATTCAGATATTGACTGGTTTATCTTTACTTGAACTCATCTTGGGTCGGCTACTTG
TTATAGTTGGAGTACTATGTACTTATAAAGTTGGGTCGTCTATTTTAGAACGGAGGAAGTACTATGTACTTATTGAGATC
CAACACTGATTGGATCACTTATATTTAGTCAGTTTTTCAGTAATGC-TCTAATTTATTGTTCACCGGCCTGACCAAATCT
AGACAAAA-ATATGAATGGTGTATTTCTGAGTTAATTGTGTTTCATAGACTTGTTTGGCACACTTATCGATGCCAAGTTA
ACTGACATATATATAC------TCTTTTGCTTTTAGATGTTTCATTTTCCCAATTGATAATTTGATTATCCTTCAAAATT
TGCAATGTTTCTAGAATGAAAAATTCCAACCAGATGTAGTTGAAGTGAACCGCTGAAGGAAATGTAACAACCAATAATAG
GTGCACATGCATTATACTGAGCTCTATGGTGAAGGTTATGGGCCATTTTT------------------------------
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>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-------------------------
---------S------------S-------S--S------S----S--S-----SS-----S-S-S-----S----SS--
------------------------------S------------S------------S-------------S---------
--S--------S------S---S------------------S--------S----SS-----S------------S----
---------------S-----------------------S-S---------S--S------------S------------
------------------S--S----------------S-SS--------S-S--------------SSSS---------
--S--S--------------SSSSS-S-SSSSSSSSS----------------------S--------------------
-S-SSSSSS---------------------SS-----------SSS-------S-------S--------S-SS------
-----------------S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-------------S-----
---S--S--------S-S-S------------------------------------------------------------
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--------------------------------------------S--SS-----S-SSSS------------------S-
------------S---------------------------------S---------------------------------
-----------------------------------SSSSSSSSS---------------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS---------------------------------------------------------------------
---------SSSS-------------------------------------S-S---------------------------
-----------------------S-----------------------------SSSSSS---------------------
--------------------------------S-----------------------------------------------
------------------------------------------------------------------------S-------
------------S-------S------------SSS--------------------------------S-----------
-----------S--------------------------------------------------------------------
------------------------S--------------------------------------S----------------
--------------------------S-----------------------------------------------------
----------S-------S----------------------------------------S----S---------------
---------------------S---------------------------------S---S--------S-----------
-----------------S-----------S----------S--SS-----------------S-----------------
------------------------------------S------------------------------------S------
--------------------------S-------S-------S--S----------------------S-------S---
---S--------------S-------------------------------------------------------------
--S---S--S----SS-S------------------S-----------S-----------------------S-S-----
--S-----------S----------S-------------------S-----------S----------------------
----S----S----------------S---S------SSSSS-SSSS---------------------------S-----
--------S--S-------------S--------------S--------------------------S------S-----
-------S----SS-SSSSSSS-------------S-------------SS-----------------------------
--------------------------------S------------------S----------------------------
-S--------------------------------------S-----------S---------------------------
--S-----S------S---------SS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------SS---
--------------------S----S-----------S----S---------------------S---------------
-------------------------SSS-------------------------S-------------------------S
---SSS---------------------S----------------------------------------------------
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>forward_21
-ACGGGCTGGTTGAACAGATT-----------------------------------------------------------
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>reverse_1393
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--------------------------------CCCGTTTCTTCTCACAAGCC----------------------------
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>forward_114
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--------------GTGGCCTGGGTGTATGTGTT----------------------------------------------
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>reverse_1533
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------------GCATCTTGCGCTAGTGTCTTC-----------------------------------------------
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>forward_1334
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----------------------------------TCTTCTCCTCCACCTCCACC--------------------------
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>reverse_3068
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---------------------------GTGATCAGGTCCTCGAGTCG---------------------------------
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