>input_sequence_65159
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------------------------------------------ATGGACGGTGGAAAGGACAAAGGTGCAGGTGGATACAG
CGGGTACCCCGGTGGCTACCCTGCTCCGGCGGGATACCCCGGTTACCCGGTTCCAGTAAGCACGTATCCGCCGGCGCCCG
GATATGCTGCTCCGCCTGGGCAGTATGCGCCACCTCCCGGCGCGTACCCTCAGCCCGGGGGTTATCAACCGCCGCACGTT
GCGTATCCTCCGAGCGGGTACCCTGCGACCGCTGGGTATCCGCAATATCCTCCTACGACCCACCCTCCAGCTGGTTATCC
CGCTCAAGGGCCACCAATGCAGGTTCCTCCTTATGGTATGTCCTTTTACACACACTTCATTTGTTCATTTGTGTGTTTAT
TTATATATTGAAATGGTATCTGCTCTATTTGTTAAATTTTATCTCTAATATATACTCGTAGTACATAA------------
---------------------------------------GTATTCAGATTTTTCTCTCCAAAAAATATATATTCAGATT-
-TACAGTATCAAAATTATTATTACATTTGTCGCTAAAACATAGTATGTTTATTGGATAGTACTTTGGAAAAAATTACCGA
CAACAAATAGAAACGGCAACCATCAAGTATGCATGTTCATGTCCAAAAATGCCA------AGTAAAAAGCAATCAGATCT
AATAAAAGAAATAAAAATGGCACTTCCCAGTTTACATGGAGG------CATGTTATGGAC----------TCGGTCGAGT
CAACTTACAAGCCATTTTGTTCAGGTCAAGCTCCTATGTACGGGGGAGGCAGCCATGGCGTAGCAGGCGGTATGATTGCC
GGCGGCGCGGCAGCGGCAGCCGCAGCATATGGAGCTCACAAGGTGTCACACGGCGGCGCCCACGGAATGTACGGCCACGG
GCACCACCACGGCAAGTTCAAGCATGGCAAGTTCAAGCACGGCAAGTTTGGCAAGCACAAGAAGATGTACGGGCGCAAGT
GGAAGTGA------------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G487800
GCTGGAACGACCTCTTTTGGGCGGTGCATCCCGGAGGGCGAGCAATCTTAGACGGCGTGGAGGAGGTACTCCAGTTGGAG
CCCAAGAAGCTGGCGGCAAGCAGACATGTGCTGAGCGAGTACGGCAACATGTCCGGGGTGTCCGTCATCTTTGTGCTGGA
CGAGATCCGGCGCCGCCATGACGAGCACCGCGGTCTGGGGGTAATGCTGGGAATTGGACCGGGGCTCTGCCTGGAGACGA
TGGTGTTGCACGCATGCATGTAACACCTAATGTTGCCACGCAATAATCACCATTACGGTGGGAAAAACTACAAATAAATG
CAAAAAAATTCGACGATGGTGTTGCACGCATGCATGTAACACCTAATGTTGCCACACAATAATCACCATTACGATGGGAG
AAACTACAAATAAATGCAAAAACTTCTTCAAATCGGACTTCGTGAGCATATGATTATTCCTCTTCAACTTGCTAATTGCA
AAATTAGCAAAAAATTCCGTCGCCTGGACTTGAACCCGGGTCTCTCTGGTGAGAGCCGAGTAGCCTAACCACCTAGACTA
CGACGGATCTTGGGAGCCTGAATGCAGTTCTGCTTACTTATGCACAAAAAGAATGGGTACTTCGTAAAGCAAATGTCGCG
GGTAAAATCGCAACCAAGTTATTCTTTGCTTGTCCACGTGCATCTATCACAGGCGAACGAATGACCGATCGACAAGGAGC
CAGCAAATAGAGCTCGCCGCAGGCTGTCCTCGCCAAGAATGCTGCGGCGACAAGAGCCCCCAGACCTGCCGTGCACCTTC
AAATCAAGAAAATAGAAGCTCTAAACATAGACAACTTGCCCTGAATAACCCTCCCGCCGTTGCTCTCAAGCTCGG--TAT
ATATACCCGTCCATGGCAAGAGGAGAAGAAGCTGCTAGCCATCTGGAATCAGCCTCCTCCCTGTTTGTTGTACTCCCATT
CCTCCTCCTTTACAAGTAGGTGAACAAGCTAGAGGGAGAGGCATGGACGGTGGAAAGGACAAAGGTGCAGGTGGATACAG
CGGGTACCCCGGTGGCTACCCTGCTCCGGCGGGATACCCCGGTTACCCGGTTCCAGTAAGCACGTATCCGCCGGCGCCCG
GATATGCTGCTCCGCCTGGGCAGTATGCGCCACCTCCCGGCGCGTACCCTCAGCCCGGGGGTTATCAACCGCCGCACGTT
GCGTATCCTCCGAGCGGGTACCCTGCGACCGCTGGGTATCCGCAATATCCTCCTACGACCCACCCTCCAGCTGGTTATCC
CGCTCAAGGGCCACCAATGCAGGTTCCTCCTTATGGTATGTCCTTTTACACACACTTCATTTGTTCATTTGTGTGTTTAT
TTATATATTGAAATGGTATCTGCTCTATTTGTTAAATTTTATCTCTAATATATACTCGTAGTACATAA------------
---------------------------------------GTATTCAGATTTTTCTCTCCAAAAAATATATATTCAGATT-
-TACAGTATCAAAATTATTATTACATTTGTCGCTAAAACATAGTATGTTTATTGGATAGTACTTTGGAAAAAATTACCGA
CAACAAATAGAAACGGCAACCATCAAGTATGCATGTTCATGTCCAAAAATGCCA------AGTAAAAAGCAATCAGATCT
AATAAAAGAAATAAAAATGGCACTTCCCAGTTTACATGGAGG------CATGTTATGGAC----------TCGGTCGAGT
CAACTTACAAGCCATTTTGTTCAGGTCAAGCTCCTATGTACGGGGGAGGCAGCCATGGCGTAGCAGGCGGTATGATTGCC
GGCGGCGCGGCAGCGGCAGCCGCAGCATATGGAGCTCACAAGGTGTCACACGGCGGCGCCCACGGAATGTACGGCCACGG
GCACCACCACGGCAAGTTCAAGCATGGCAAGTTCAAGCACGGCAAGTTTGGCAAGCACAAGAAGATGTACGGGCGCAAGT
GGAAGTGAAGAGGGGAAAAGATACGGCTACTCGGATGTACGTACGTACTACGTAGACAACATGTAGACCCGTATAATTCG
CCATCTTGCTCTCTCACATCTCACCAATGACTCCTCGCTTGTGCCGCTCAGAAGGGGAAAAAA--TGTGATCACCTGTGT
TACCGTTCCTTTTTCTTCCGAGGATCACTAGCAGCCTTATTTGTTGATGAACAATGTTCATACGAATACAAGCAAACTCG
CAGAAAATATGGGATTTGTTCTAGTGTTTCTAGTCTAGTACTGTAGTACTAGCAACACATGGGATCTCCAATTCTCCAAA
GATAGACGGTGCATGATGGTGTTTACGGAGTCTCCGCCTCTCCGGGCATCAAGCCTGACGAAACTGCTT-----------
------------------------------------------------------------------------GGGTAACT
TCAGCTTGGGTAACAAAGCTACTCCCTCTAGATAAATCCGTTCGAGCGACAAGTAATATGGATCCGAGGGAGTACTGTGT
TTCTCTCCTATGCTTCTCCTACCCTAACTCGCCCCAAGTTCTAGTTCTAGTTCTTCAATTCTTCCTCTTGTCA------T
TGGAATCCCCAGATACGAAATCACAGGTGGATCGGGTCTCATAACAGGTCCATTACTTGTAATTTATGTGCAAGTAAATG
CC---TTTTCATTGTACAAAAGACGCACACAGGACA-------TGTCATGC-----------------------------
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-------------------------------AGGTTCCAACCTAGCACGGGGTGGCATAAAACTGAACTTCATGCTG-CA
AGGACTTCATGCACATCAAATTTAGCTTGTTTATCCAAGACACTGATGCTTCTCAGTTAAAAGGAAGACGGCACAGATGC
TTCAGATGTTAT-CTTTTTCTTCCCCTCAGCATGTCCACCTGCCTTCTGCTTTTCATGATCAATCATCTGCACCTTTATC
CTGTAAGTAGCTCCTATGGCGGTGGCGATGATTGCGAACCAGGTCACCGGCGTTTTCCTGCAGACAAACCACCGTCAAAA
ACAGGACTCAT-ATCCCCGTTACCTGACGAATCTAGGTAGCTACACATTTGA
>chr5D_698
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---------------------------------------------------------CGAATGACCGACCTATACGGTGC
CAGCAAATAGAGCTCGCCGCAGGCTGTCCTCGCCAAGAATGTTGCGGCGACAAGAGCCCCCTGACCTGTAGCGCGCCTTC
AAATCAACAAAATAGAAGCTCTAAACATAGACAACTTGCCCTGAATAACCCTCCTGCCCTTGCTCTCAAGCACAATATAT
ATATACCCGTCCATTGCACGAGGAGAAGAAGCTGCTAGCCATCTGCAATCAGCCTCCTCCCTATTAGTTGCACATCCGTT
CCTCCTTTATT---AGTAGGTGAACAAGCTAGAGGGAGAGGCATGGACGGTGGAAAGGACAAAGGTGCGGGTGGATACAG
CGGGTACCCCGGTGGCTACCCTGCTCCGGCGGGATATCCCGGTTACCCTGTTCCGGTAAGCACGTATCCGCCGGCGCCCG
GATATGCTGCTCCACCTGGGCAGTATGCGCCACCTCCCGGCGCGTACCCTCAGCCCGGGGGTTATCAACCGCCGCACGTT
GCGTATCCTCCGAGCGGGTACCCTGCGACCGCTGGGTATCCGCAATAT---CCTACGACCCACCCTCCAGCTGGTTATCC
CGCTCAAGGGCCACCAATGCAGGTTCCTCCTTATGGTATGTCCTTTTACACCAAAAAGTCACTTCGAAC-----------
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------------------------------------TCATGTCCAAAAATGTTAGT---------AAAGCAATCAGGTAT
AA----------TAAAATGGCACTTCACAGTTCATATGGAGGCATGACCATGTTATGAAC----------TCGGTCGAGT
CAACTTACAAGCCATTTTGTTCAGGCCACGCTCCTATGTACGGGGGAGGCGGCCATGGCGTAGCAGGCGGTATGGTTGCT
GGCGGCGCGGCAGCGGCAGCCGCAGCATATGGAGCTCACAAGGTGTCGCACGGCGGCGCCCACGGGATGTACGGCCACGG
TCACCACCAGGGCAAGTTCAAGCATGGCAAGTTCAAGCACGGCAAGTTTGGCAAGCACAAGAAGATGTACGGCCGCAAGT
GGAAGTGAACAGGGGAGAAGATACGGCTACTCGGATGTACGTA----TTACGTAGACAACATGTAGACCCGTATAATTCG
CCATCTTGCTCTCTCACATCTCACCAATGACTCCTCGCTTGTGCCGCTCAGAAGGGAAAAAATGTGAT--TCACCTGTGT
TATCGTTCCTTTTTCTTCTGAGGATCACTAGCAGCCTTATTTGTTGATGAACAATGTTCATACGAATACAAGCAAACTCA
TAAAAAATATGGGATTTGTTCTATTGTTTCTAGTCTAGTACTGTAGTACTAGCAACACATAGGATCTCCAATTCTCCAAA
GATTGACGGTGCATGATGGTGCTTACGGAGTCTCGGCATCTCCCGGCATCAAGCCTGACGAAACTGCTTTCGCAAAAAAA
GGATGTCTGACGGAACTGAACATGTTCATTCAGGCAAGTAACGAAACAGGGGTGATGGCGCGCCTGCCGAGAGGGCAACT
TCAGCTTGGGTAACAAAGATACTTCCTATAGACAAATCCGTTTGAGCGACGAGTAATATGGATAGGAGGGAGTACCGTGT
TTCTCTCCTATGCTCCTCCTACCCCAAGTCCCGCCAAGTTCTAGTTCTAGTTCTTCAATTCTTCCTCTTGTCATA-----
-GGAATCCCCAGATACGAAATTACAGGTGCATCGGGT--CATAACAGGCTAATTACTTGTAATAATTTATGTATAACTAA
ACTGGTTTTTATTGTACAAAATACGCACACACCACACAGGACATGCAGGTTCCAACCAAGGCCTGCAGGGTCGTTCACCT
ACTTGCATAATTCGTAATACGGTTATTATGTCCATCCTCTGGAGTGTGTGGAAAAGAAGGAATGCTAATGTTTTCAAGCA
AGAAGTTGAGTCCTCGGGTTTCGTTCTTCGGCGGGCAGCGCAAGACCTCTTTCTTTGGGCCCATAGATGTGGAAATGAAG
ATCGCAAACAAGTTCTGATTGACTGGGGTATCATGTTGTCCCGGCTAGATGTAGCATTAGCATAGTTGTTTTCTTTTGAT
GTTTCTACCTTCTCAAATCCCCCACCCTCTGTACATATACTCTGTTAAACCTTAAAATTAATAAATGCGTTCAGGCTGGC
TTTTGCCCGCCGTAGTACCCTAAAAAAAAAGAGGTTCCAACCTAGCACGGGGTGGCATAAAACTGAACTTTATGCCTACA
AGGACTTCAAGCACATCAACCTTAGCCTGTTTATCCAAGATGCGGATGCTTCTCAGTAAAAGGAAGACATGCACAGATGC
TTCAAAGGCTATCCTTTTTCTTCCCCTCCTCGTGTCCACATGCCTTCTGCTTTTCATGATCAGTCGTCTGCACTTTTATC
CTGTAAGTAGTTCCAATGGCGGTGGCGATGATTGCGAACCAGGTCACCGGCGTTCTCCTGCAGAGAAACCACCGTCAAAA
GACAGAACTCAAATCTCCTTTACCTGACGAATCTAGTTAGACACACATTTGA
>chr5A_698
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---------------------------------------------------------CGAATGACCGATCTATAGGGTGC
CAACAAATAGAGCTCGCTGCAGGCTGTCCTCGCCAAGAATGCTGCGGCCACAAGAGCCCTCTGAGTTGTCGTGCACCTTC
AAATCAAG-AAATAGAAGCTCTAAAGATAGACAG-TTCCCTTGAATAACCCGCTTGCAGTTGCTCGCAAGCACGGTATAT
A--TACCCGTCCATTGCACGAGGAGAAGAAGCTGCTAGCCATCTGGAATCAGCCTCCTCCCTGTTTGTTGTACTCCCATT
CCTCCT--TTTACCAGTAGGTGAACAAGCTAGAGGGAGAGGCATGGACGGTGGAAAGGACAAAGGTGCGGGTGGGTACAG
CGGGTACCCTGGTGGCTACCCTGCTCCGGCGGGATATCCCGGTTACCCTGTTCCGGTAAGCTCGTATCCGCCGGCGCCCG
GATATGCTGCTCCACCTGGGCAGTATGCGCCACCTCCCGGCGCGTACCCTCAGCCCGGGGGTTATCAACCGCCGAACGTT
GCGTATCCCCCGAATGGGTACCCCGCCACCGCTGGGTATCCACAATAT---CCTACGGCCCACCCTCCAGCTGGTTATCC
CGCTCAAGGGCCACCAATGCAGGTTCCTCCTTATGGTATGTCCCTTTACACACACTTCATTTGTTCATGTGTGTGTGTGT
GTTTCA----AAATGGTATTTATTCTATTTATTGCTTTTTACCACTAATATATACTCCCTCTATAACTGATAGTGTCAAA
GAATGTCTTATATTAAGTTACAGAGGGAGTAATACATATGTATTCACATTTTTCTCTCAAAAAAATAAATATTCAGATTT
ATACAATATAAATATTATTATTACAATTGTCGCTAAAACAT---ATGTTTATTTGATAGTGCTTTCAAAAAAACTACTTG
CAACAAATAGATACGGGAACCGTCAAGTATGCATGTTCATGTCCAAAAGTGTTAAGTACTAGTAGAATGCAATCAGGTGT
GA----------AAAGATGGCACTTCATGGTTCATATGGAGG------CATGACCATGTTATGAACTCGATCGGTCGAGT
CAACTTGCAAGCCATTTTGTTCAGGTCACGCTCCTATGTACGGGGGAGGCGGCCATGGCGTAGCAGGCGGCATGATTGCC
GGCGGCGCGGTGGCGGCAGGCGCAGTATATGGAGCTCACAAGGTGTCGCACGGCGGCGCCCACGGGATGTACGGCCACGG
TAACCACCACGGCAAGTTCAAGCATGGCAAGTTCAAGCACGGCAAGTTTGGCAAGCACAAGAAGATGTACGGGCGCAAGT
GGAAGTGAAGAGGGGAAAAGATACGGCTACTCGGATGTACCTA----CTACGTAGACAACATGTAGACCCGTATAATTCG
CCATCTTGCTCTCTCTCATCTCACCAATGACTCCTCCC-TGTGCCGCTCAGAAGGGGGAAAAAGATGTGATCACCTTTGT
TATCGTTCCTTTTTCCTCTGAGGATCGCCGGCAGCTTTA-TTGTTGATGAACAATGTTCATACGAATACAAGCAAACTCG
CAGAAAATATGGGATTTGTTTAGTG----------------------------------------CTCCAATTCTC----
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-------------CAAAGCTACTCCCTCTAGATAAATCCGTTTGAGTGAAAAGTAATATGGATCGGAGGGAGTACTGTGT
TTCTCTCCGATGCTTCTCCTACCCCAACTCCCA---------AGTTCTAGTTCTTCAATTCTTCCTCTTGTCATTGGAAT
TGGAATCCCCAGATACGAAATCACAGGTGGATCGGGT--CATAACAGGTTAATTACTTGTAATTTATGCATAATAACTAA
ATTGGTTTTCATTGTACAAAATACGCACACAGGACA-------TGCAGGTTCCA--------------------------
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-----------------------------------TCCAACATAGCACGGTTTGGCATACAACTGAACTTTAT-------
------------------------GCCTGTTTATCCAAGATACTGATGCTTCTCAGTTAAAAGGGAGACAGCACAGATAA
TTCAGATGCTAACACTTTTCTTCCCCTCCTCGTGTCCACATGCCTTCTGCTTTTCATGATCAGTCGTCTGCACTTTTATC
CTGTAAGTAGCTCCTATGGCGGTGGCGATGATTGCAAACCAGGTCACCGGCGTTCTCCTGCAGACAAACCACCGTCAGAA
AACATAAAGCAAATCTCTGTTACCTGACGAATCTAGGTAGACACACATTTGA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-S-S--S--
-------------------------------------------------------------S------S-----------
------------------------------------------------------S----------------S--------
--------------S---S-------------------------------------------------------------
------SS-----S------------------------------------------------------S-----------
------------------------------------S-----------S-----S-------------------------
-------------S------------------------------------------------------------------
------------------------------------------------SSS-----------------------------
--------------------------------------------------------------------S-------S-S-
S-S-SSSSSS---------S-SS-------S--SSS-----S-S-------------SSSS--S-SSS------------
----------------------------------------------S-----------S--------S------------
-----S---S--S------------S---------------SSS---------S------S----SS------S---SSS
-----------S----S----S-----------------------------SS-----------S-----------S-S-
--SSSSSSSSSS--------------S-----S-S---------------------------------------------
----------------------------S---------------------S-----------------------------
-----------------------------------------------S-----------------S--------------
S-------------------------------------------------------------------------------
-------------------------------------------SSSS---------------------------------
--------------------------------------------------------------------------------
--S---------------S-------------------------------------------------------------
-----------------------S------------------------------------S-------------------
---S-----------------S------------S--S-----S------------------------------------
---------------------------------------------------------------------------S----
------------------------------------------S---------------------S---------------
------------------------S-----S-S-----------------------------------------------
-------------------------------------SS----------SS-----------------SSS--SS-SSSS
S--------------------S-----------------------SSSSSS-----------------------------
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----------------------------------------------------------------------S----SS---
---------S---------SS-----S-------------S----------------------------S----------
--------S-------------------SS-S-------S----------------------S--S-------S------
------------------------------------------------------S-------------------------
-SSS--SSSSS----S------------------------SS----------
>forward_577
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-----------------------------------------------------------------------------CTA
CGACGGATCTTGGGAGC---------------------------------------------------------------
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>reverse_2324
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---AGACGGTGCATGATGGTGTT---------------------------------------------------------
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