>input_sequence_65098
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-------------------------------------ATGGCCAATTGGCAGGGTTTGCTGAAGGTGAGGCCGGACAAGA
CGGTGGAGCTGCTGACGGACGCGGCGGAGGGCCTCAAGTTCGCCCTGACGGACGGCGTGGACATCGCCGCCGACGGCACC
ATCTACTTCACCGACGCCTCGTACAAGTACAGCCTCGCGCACCACTTTCTGGACGTGCTCGAGGCACGGCCCCACGGCCG
GCTCATGAGCTTCGACCCCTCCACGCGCCGGACCTCCGTGCTCGCCCGCGACCTCTACTTCGCCAACGGCGTCGCCGTCG
CGCCGGACCAAGACTCACTCATCTTCTGTGAGACAGTCATGTAAGCACTAAGCA-CTCGTCTGGTGTGCGTACATATATA
GCTTGTATGCTGCGA-----TCTGACCGGCTGACGCCATTGACTGCAGGAGGAGGTGCTCGCGGTACCACATCAGGGGGA
ACAAGGCAGGCACGGTGGAGAGCTTCATCGACAGCCTGCCGGGGCTCCCGGACAACATCCGATACGACGGCGAGCAGGGC
CGGTACTGGATCGCGCTCTCGGCGGTACGCACAACTCAG--------AAATTTTTGCCGTATCACCGCGTATTTCTTGAA
ACATGCATTGTAAAATTAATCAAATCGCGTTGCCGGCGATGGGCACCTGCGTGCGTGCGTGCGTGCAGGGGAGGACGCTG
CAGTTGGACGTGTTGATGTGGTCGCCATTGGTGCGGAAGCTCGTGTACATGGTGGAGAAGTACGTGATGGCGGTGCCGCA
GGGCCTGAGGGACTCGGGGACGATGAGCGTGGCTCTAAACGGGGAGCCGGTAACCATGTACACTGACCCGGGGCTCGCGC
TCGCCACCGGCTGGCTCAAGGTCGGGGGCTACCTCTACTACGGGTCGCTGGCAAGCTCCTACATCAGCAGGGTCGACCTC
ACCAAATCATCCATCCAAGCCTAG--------------------------------------------------------
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>chr1A_1_TraesCS1A01G203800
ATTTTG-CGGTAAAATTGACAAATTTGATCTATGGAAAAAATCAAATCACAGAATAAACTGTCCGTGAAAC---------
---TATTTCACATGGCTGACC-TTTTTGTGTGACGCCTGACACGAAGGCGTCACACTACATTGTGCAAGGCCTCATAGAT
AGGCGCTACACGCCTGGCCAGCATCGCACCCATGTAATCC-GAAAATTACTAAGTCAGTGTGCAGCGCCTGAGAGCTAGG
CGCCATACTATATAGTATAGCGCCTAGCTTTTAGGCGTTGCACTAGTGGTTGCTTCATTTTGTAGTGCAACCATTAGTGC
AGCGCCTGAGAGCTAGGCGCCACACTATACAGTGCAGCGCCTAGCTCGTAGGCTCTGCACAATGACTTAGCAATTTTTAG
GCAGTTTGGGGTGCAACGTTGGCCAGACGTGTAACACCTATCTGTGAGGCGTTGCACAATGTAGT-----------GTG-
----------TCAGGCGTCACACAAAAAGGTCAACCGCGTGAAATAGTTTCACAAGCAGTTCATTTTGTGATTTGATTTC
GTGCACAGGTCAAATTTGTCAAATTTGCCCCATTTTGCGGGCTTCCTCTCGTCGGATTGAGGTGCTTATAGCATGAACTA
TG---TCTGTTGAGTTGTTAACAATCTTCAGAAATCAAAACCGTTTCCCACTTAAGTTTCACCAATCGAGAAGACAAAGG
TAGATCAGTTGACTTTGGTAGCTAGCTAAAAAATCCTTGGCAAAAACTCGCTATGTTGAGATGATAT-------------
---------------TTCGCAAAATCTTGGCATAGAGAACATCGTTATCATCTACAGAGTACAGAATGGCCCACCAAATT
GCACGAGGCAGCCAAGTCTTTCTGATTCTCTATTAGTACAAGTTGCATCGTGGTACAGCTCAACCCTAACATGACAAACG
AGAAGCATCACATC---------AGTTGACTTCCATAATGAGGAAATTACTAGTTGGTTAACCAGTAACAGCGCTAATCA
GCAGTCACAGTATCGGAAAATTACTGAAGGTCGTTGGATGGCCAATTGGCAGGGTTTGCTGAAGGTGAGGCCGGACAAGA
CGGTGGAGCTGCTGACGGACGCGGCGGAGGGCCTCAAGTTCGCCCTGACGGACGGCGTGGACATCGCCGCCGACGGCACC
ATCTACTTCACCGACGCCTCGTACAAGTACAGCCTCGCGCACCACTTTCTGGACGTGCTCGAGGCACGGCCCCACGGCCG
GCTCATGAGCTTCGACCCCTCCACGCGCCGGACCTCCGTGCTCGCCCGCGACCTCTACTTCGCCAACGGCGTCGCCGTCG
CGCCGGACCAAGACTCACTCATCTTCTGTGAGACAGTCATGTAAGCACTAAGCA-CTCGTCTGGTGTGCGTACATATATA
GCTTGTATGCTGCGA-----TCTGACCGGCTGACGCCATTGACTGCAGGAGGAGGTGCTCGCGGTACCACATCAGGGGGA
ACAAGGCAGGCACGGTGGAGAGCTTCATCGACAGCCTGCCGGGGCTCCCGGACAACATCCGATACGACGGCGAGCAGGGC
CGGTACTGGATCGCGCTCTCGGCGGTACGCACAACTCAG--------AAATTTTTGCCGTATCACCGCGTATTTCTTGAA
ACATGCATTGTAAAATTAATCAAATCGCGTTGCCGGCGATGGGCACCTGCGTGCGTGCGTGCGTGCAGGGGAGGACGCTG
CAGTTGGACGTGTTGATGTGGTCGCCATTGGTGCGGAAGCTCGTGTACATGGTGGAGAAGTACGTGATGGCGGTGCCGCA
GGGCCTGAGGGACTCGGGGACGATGAGCGTGGCTCTAAACGGGGAGCCGGTAACCATGTACACTGACCCGGGGCTCGCGC
TCGCCACCGGCTGGCTCAAGGTCGGGGGCTACCTCTACTACGGGTCGCTGGCAAGCTCCTACATCAGCAGGGTCGACCTC
ACCAAATCATCCATCCAAGCCTAGCTAGGACGGTCCGCTCACTCATCCTCTCTGGATTGAGTAATTGTTCGTTCTCATGG
AATCATGATGAACTCGTGGTGCTTTTTTTTTTTGAAGGGGAGTTGTGCTTTTTTTCAGTACTATTCCCTCCGTCCCATAA
TATAAAAGCATTTAATGTCTAAAACATCCTTATATTATGAGACGGAGGGAGTAGATAATACCCCACATCTGTTGCAGAAA
TATTTTGCAACATATTTTAATAATATATGACTAGCACATATGCCCGTGCGTTGCAACGGGAGAGATAATTGATATGTCCG
TCAAAATATTCATCACCACAGCCCAACAACATTCGAATGGTGCCACCCGCCCACGACAGAGAGCTGCACACTAAGGTCTA
GCAGAAATTCATATAAGTTGTACATTTGGTATGGGTTTTCTATGACGATTCTAATCCTAAAGAGCCTAGTTTTCAAATGT
TTTATACCAAGGCATTATTTGTAGGTTGAAGCCATGTTTGAAATCTGCATCAAATCGTGAAAAAATAACAATAAACTAGT
TATTGTAAATGCGTTTTAGGCCATCTCTGCAAACACTTGAAGATTAATTAAAAGAAATGTTTGCGTATGAGGGAAACAAA
CCTAGTTTGTTGCATTCAACTCGACGCTTACGTAATGCCTCTCACCTTTCTAGTTGCATTATTTTTGTTGCACATCATGG
TCGCACGCTCCGCAACAACACTTATATGTCTGCCCCTTTCACATCTCTCGATATCAATTCCTTTTTGTCATTTTATGTAT
GCCACGCCCTTGGTATTAGTACCAATTCCTTTATGTTATCCTCTCCTTCATATTTTTTTAATCTCC----CG-TTTTTTT
ATGTCCATTGATCACACCCTTTATTCTCTCGTATTTTTATTACATATGCCATTCGAAACCGGTATTTCATATTTAATTTA
GCGCCACAACATCCCATGAAATATAAGCCACATGTAAGCCCACCTTTGTTTCCTTATTCTCGAGGTGTT
>chr1D_1
ATTTGGACGGCAAAATTGACAAATTTGACCTATGGACGAAATCAAATCACAGAATGAACTGTCCGTGAAAC---------
---TATTTCACGCGGCTGACC-TTTTTGTGTGACGCCCGACACGAAGGCGCCACACTACACTGTGCAACGCCTCACAGAT
AGGCGCCACACGCCTGGCCAGCGTCGCACCCATGTGATCC-GAAAATTACTAAGTCAGTGTGCAGCGCCTGAGAGCTAGG
CGCCACACTATACAGTGGAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCATTTTGTAGTGCAACCACTAGTGC
AGCGCCTGAGAGCTAGGCGCCACACTATACAGTGCAGCGCCTAGCTCTTAGGCTCTGCACAATGACTTAGCAATTTTTAG
GCAGTCTGGGGTGCAACGCTGGCCAGGCGTGTAGCGCCTATCTGTGAGGCGTTGCACAATATAGT-----------GTGG
CGCCTTTGTGTCGGGCGTCACACAAAAAGGTCAGCCGTGTGAAATAGTTTCATGGGCAGTTTATTCTGTGATTTGATTTC
GTCCACATGTCAAATTTGTCAAATTTGCCCATTT----------------------------------------------
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>chr4D_6
-----G-CGGCAAAATTGACAAATTTGGCCTATGGATGAAATCAAATCACAGAATGAACTGTCCGTGAAAC---------
---TATTTCACGCGGCTGACC-TTTTTGTGTGACGCCCGACACGAAGGCGCCACACTACACTGTGCAACGCCTCACAGAT
AGGCGCTACACGCCTGGCTAGCGTCGCACCCGTGTGATTC-GAAAATTACTAAGTCAGTGTGCAGCGCCTGAGAGCTAGG
CGCCACACTATACAGTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCATTTTGTAGTGCAACCACTAGTGC
AGCGCCTGAGAGCTAGGCGCCACACTATACAGTGCAGCGCCTAGCTCTTAGGCTCTGCACAATGACTTAGCAATTTTTAG
GCAGTCTGAGGTGCAACGCTGTCCAGGCGTGTAGCGCCTATCTGTGAGGCGTTGCACAGTGT---------------TGG
TGTCTTCGTGTCGGGCATCACACAAAAA-GTCAGCCACGTGAAATAGTTTCACGGACAGTTCATTCTATGATTTGATTTC
GTCCTCAGGTTAAATTTGTCAAATTTGCTCCC------------------------------------------------
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>chr7A_7
-------CGGCAAAATTAATAAATTTAACCTATGGACGAAATCAAATCACAAAATGAACTGTCCGTGAAAC---------
---TATTTCACGCGGCTGACC-CTTTTGTGTGACGCCCAACACGAAGGCGCCACACTATACTATGCAACGCTTAACAGAT
AGGCGCTACACGCCTGGCCAGCGTCGCACCCATGTGATCC-GAAAATTACTAAGTCAGTGTGCAGCGCCTGAGAGCTAGG
CGCCACACTATACAGTGTAGCGCCTAGTTTCTAGGCGTTGCACTAGTGGTTGCTTTATTTTGTAGTGCAAACACTAGCGC
AGCGCCTGAGAGCTAGACGCTATACTATACAGTGCAACGCCTAGCTCGTAGGCTCTGCATAATGATTTATCAATTTTTAG
GCTGTTTGGGGTGCAACGTTGGCCAGGCGTGTAGCGCCTATTTGTGAGGCGTTGTACATTGAAGT-----------GTGA
CGCCTTCGTGTTGGACGTCACACAAAAAGGTCAACCGCGTGAAATAGTTTCACGAGCAGTTCATTCTGTGATTTGATTTC
GTTCACAGGTCAAATTTGTCAAATTTGCCC--------------------------------------------------
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>chr1A_8
--------GGCAAAATTGACAAATTTGACCTATGGACAAAATCAAATCACCGAATGAACTGTCTGTGAAAC---------
---TATTTCACATGGCTGACC-TTTTTGTGTGACGCCTGACACGAAGGCGTCACACTACACTGTGCAACGTCTCACAGAT
AGGCGCTACACGCCTGGCCAGCATCGCACCCATGTGATCC-GAAAATTACTAAGTCAGTGTGCAGCGCCTGAGAGCTAGG
CGCCACACTATACAGTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCATTTTGTAGTGCAACCACTAGTGC
AGCGCCTGAGAGCTAGGCGCCACACTATATAGTGCAGCGCCTAGCTCGTAGGCTCTGCACAATGACTTAACAATTTTTAA
GCAGTTTGGGGTGCAACGTTGGCCAGACGTGTAGCGCCTATCTGTGAGGCATTGCACAATGTAGT-----------GTGA
CGCCTTCGTGTCGGGCGTCACACAAAAAGGTCACCCGCGTGAAATAGTTTCACAAGCAGTTCATTTTGTAATTTAATTTC
GTCCATAGGTTAAATTTGTCAAATTTACCC--------------------------------------------------
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>chr1A_8
--------GGTAAAATTGACAAATTTGACCTATGGACAAAATCAAATCACAGAATGAACTGTCCGTGAAAC---------
---TATTTCACGTGGCTGATC-TTTTTGTGTGACGCCCGACACGAAGGCGTCACACTACACTGTGCAACGCCTCACAGAT
AGACGCTACACGCCTGGCCAGCATCGCATCCATGTGATCC-GAAAATTACTAAGTCAGCGTGCAGCGCCTGAGAGCTAGG
CGTCACACTATACAGTGTAGCGCCTAGCTTCTAGGCGTTACACTAGTGGTTGCTTCATTTTGTAGTGCAACCACTAGTGC
AGCGCCTGAGAGCTAGGCGCCACACTATACAGTGCAGCGCCTAGCTCGTAGGCTCTGCACAATGACTTAGCAATTTTTAG
GCAGTTTGGGGTGCAACGTTGGCCAGGCGTGTAGCGTCTATCTGTGAGGCGTTGCACAATGTAGT-----------GTGA
CGCCTTCGTGTCGGGCGTCACACAAAAAGGTCACCCACGTGAAATAGTTTCACGAGCAGTTCATTTTGTAATTTGATTTC
GTCTACAGGTCAAATTTATCAAATTTGCC---------------------------------------------------
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>chr7A_8
--------GGCAAAATTGACAAATTTAACCTATGGACGAAATCAAATCACAAAATGAACTGTCCGTGAAAC---------
---TATTTCACGCGGCTGACC-TTTTTGTGTGACGCCTGACACGAAGGCGTCACACTACACTGTGCAACGCCTCGCAGAT
AGGCGCTACACGCCTGGCCAGCGTCGCATCCATGTGATCC-GAAAATTACTAAGTCAGTGTGCAGCGCCTGAGAGCTAGG
CGCCACACTATACAGTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCATTTTGTAGTGCAACCACTAGTGC
AGCGCCTAAGAGCTAGGCGCCACACTATACAGTGCAGCGCCTAGCTCGTAGGCTCTGCACAATGACTTAGCAATTTTTAG
ACAGTTTGGGGTGCAACGTTGGCCAGGCGTGTAGCGCCTATCTGTGAGGCGTTGCACAATATAGT-----------ATGA
CGCCTTCGTGTCGGGCGTCACACAAAAAGGTCAGCCGCGTGAAATAGTTTTACGAGCAGTTCATTCTGTGATTTGATTTC
GTTCACAGGTCAAATTTATCAAATTTGCC---------------------------------------------------
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>chr2A_8
--------GGCAAAATTGACAAATTTGACCTATGGACAAAATCAAATCACAGAATGAACTGCCCGTGAAAC---------
---TATTTCACGTGGCTGACC-TTTTTGTGTGACGCCCGACACGAAGGCGTCACACTACACTGTGCAACGCCTCGCAGAT
AGGCGCTACACGCCTGGCCAGCGTCGCACCCATGTGATCC-GAAAATTACTAAGTCAGTGTGCAGCGCCTGAGAGCTAGG
CGCCACACTATACATTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCT-CATTTTGTAGTGCAACCACTAGTGC
AGCGCCTGAGAGCTAGGCGCCACACTATACAGTGTAGCGCCTAGCTCGTAGGCTCTGCACAATGACTTAGCAATTTTTAG
GCAGTTTGGGGTGCAACGTTGGCCAGGCGTGTAGCGCCTATCTGTAAGGCGTTGCACAATGTAGT-----------GTGA
CGCCTTCGTGTCGGGCGTCACACAAAAAGGTCAGCCGCGTGAAATAGTTTCACGAGCAGTTCATTCTGTGATTTGATTTC
GTTCACAGGTCAAATTTGTTAAATTTGCC---------------------------------------------------
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>chr2A_11
-----------AAAATTGATAAATTTGACCTATGGACAAAATCAAATCACAGAATG------------AATTGTTCGTGA
AACTATTTTACGTGGCTGA-CATTTTTGTGTGACGCCCGACACGAAGGCGTCACACTACACTGTGCAACGCCTCACAGAT
AGGCGCTACACGCCTGGCCAACATCGCACCCATGTAATCC-GAAAATTACTAAGTCAGTGTGCAGCGCCTGAGAGCTAGG
CGCCACACTATACAGTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCATTTTGTAGTGTAACCACTAGTGC
AGCGCCTGAGAGCTAGGCGCTACACTATACAGTGCAACGCCTAGCTCGTAGGCTCTGCACAATGACTTAGCAATTTTTAG
GCAGTTTGGGGTGCAACGTTGGCCAGGCGTGTAGCGCCTATCTGTGAGGCGTTGCACAATGTAACGTGACGCCCTCGT--
---------GTTGGGCGTCATACAAAAAGGTCACCCGCGTGAAATAGTTTTACGAGCAGTTCATTTTATGATTTGATTTC
GTTTACAGGTTAAATTTATCAAATTTGCCC--------------------------------------------------
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>chr2D_11
-----------AAAATTGACAAATTTGACCTATGGACGAAATCAAATCACAGAATG------------AAC---------
---TATTTCACGCGGTTGACC-TTTTTGTGTGACGCCCGACACGAAGGCGTCACACTACACTGTGCAACGCCTCATAGAT
AGGCGCTACACGCCTGGCCAGCATCGCACCCGTGTGATCC-GAAAATTACTAAGTCCGTGTGCAGCGTCTGAGAGCTAGG
CGCCACACTATACAGTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCATTTTGTAGTGCAACCACTAGTGC
AGCGCCTGAGAGCTAGGCGCCACACTATACAGTGCAGTGCCTAGCTCTTAGGCTCTGCACAATGACTTAGCAATTTTTAG
GCAGTCTGGGGTGCAACACTGGCCAGGCGTGTAGCGCCTATCTGTAAGGCGTTGCACATTGTAGT-----------GTGG
CGCCTTCATGTCGGGCGTCACACAAAAAGGTCAACCGCGTGAAATAGTTTCACAGGCAGTTTATTCTGTGATTTGATTTC
GTCCACAGGTCAAATTTGTCAAATTTGCC---------------------------------------------------
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>chr2A_12
------------AAATTGACAAATTTGACCTATGGTCGAAATCAGATCACAGAATGAACTGCTCGTGAAAC---------
---TATTTCATGTGGCTGACC-TTTTTGTGTGACGCCCAACACGAAGGCGCCACACTACACTGTGCAACGCCTCACAGGT
AGGCGCTACACGCCTGGCCAGCGCCGCACCCGTGTGATCC-AAAAATTACTAAGTCAGTGTGCAGCACCTGAGAGCTAGG
CGCCACACTATACAGTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCATTTTGTAGTGCAGCCATTAGTGC
AGCGCCTGAGAGCTATGCGCCACACTATATAGTGCACTGCCTAGCTCTTAAACTCTACACAATGACTTAGCAATTTTTAA
GCAGTCTGGGGTGCAACACTGGCCAGACGTGTAGTGCCTATATGTGCGGCGTTGCACAGTGTAGT-----------AT--
-------------GGCGTCACACAAAAAGGTCAGCCGCATGAAATAGTTTCACGGACAGTTCATTCCGTGATTTCATTTC
GCCCACAGGTCAAATTTGTCAAATTTGCC---------------------------------------------------
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>chr6D_19
-------------------CAAATTTGACCTATGGACGAAATCAAATCACAGAATA------------AACTGCCCGTGA
AACTATT---CGCGGCTGA-C-TTTTTGTGTGACGCCTGACACGAATGCGCCACATTACACTGTGCAACACCTCACAGAT
AGAAGCTACACGTCTGGCCAACGTTGCATCCCAGACTGCCTAAAAATTGCTAAGTCATTGTGCATGGCCTAAGAGCTAGG
CGCTGCACTGTATAGTGTGGCGCCTAACTATCAGGCGCTGCACTAGTGGTTGCACTACAAAATGAAGCAATCACTAGTGC
AACGCCTAGAAGCTAGGCGCTACACTGTATAGTGTGGCGCCTAGCTCTCCGGCGCTGCACACTGACTTATTAATTTTCGG
ATCACAC-GGGTACGACGCTGGCCGGACGTGTAGCGCCTATCTGCAAGGCGTTGCACAGTGTAGT-----------GT--
---------GTCGGGCGTCACACAAAAAGGTCAACCGCGTGAAATAGTTTCACAGGCAGTTCATTCCGTGATTTGATTTC
GTC-ATAGGTCAAATTTGTCGATTTTGCC---------------------------------------------------
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>chr1B_553
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-----------------------------CCATTTTTCGGGCTTCCTCTCGTTGGATTGAGGTGGTTATAGCATGAACTA
CG---TATGTTGAGTTGTTGACAATCTTCAGAAATCAGAACCGTTTCTCACTTAAGTTCCACCAATCGAGAAGACAAAGG
TAGATCAATTGACCTTGGCAGAC----AAAACACCCTTGGTAAAATCTCGCTATGTTGAGCTGATAG-------------
------------TACTTCGCAAAATCTTGGCATAGAGAACATTGTTATCATCTACAGAGTACAGAATGACCCACCAAATT
GCACGAGGCAGTCAAGTCTTTCTGATTCTCTATTAGTACAAGTTGCATCGTGGTACAGCTCAAAGCTCACATGACAAACC
AGAAGCATCACATCACAGACATGAGTTGACTTCCATAATGAGGAAATTACTAGTTGGTTAACCAGTAACAGCGCTAATCA
GCAGCCACAGTATCGGAAAATTACTGAAGACCGTTGGATGGCC---TGGCAGGGTTTGCTGAAGGTTAGGCAGGACAAGA
CGGTGGAGCTGCTGACGGACGCGGCGGAGGGCCTCAAGTTCGCCCTGACGGACGGCGTGGACATCGCCGCCGACGGCACC
ATCTACTTCACCGACGCCTCGTACAAGTACAGCCTCGCTCACCACTTTCTGGACGTGCTCGAGGCACGGCCCCACGGCCG
GCTCATGAGCTTCGACCCCTCCACGCACCGGACCTCCGTGCTCGCGCGCGACCTCTACTTCGCCAACGGCGTCGCCGTCG
CGCCGGACCAGGACTCGCTCATCTTCTGTGAGACGGTCATGTAAGCAT---GCA-CCCGCCCGTTGTACGTGCATCTGAA
GCTTGCACGCTGCGGTGCGGTCTGACCGGCTGACGCCATTGACTGCAGGAGGAGGTGCTCGAGGTATCACATCAGGGGCG
ACAAGGCAGGCACGGTGGAGAGCTTCATCGACAGCCTGCCGGGGCTCCCGGACAACATCCGATACGACGGCG---AGGGC
CGGTACTGGATCGCGCTCTCGGCGGTACGCACAATTTTGCAGCCAAAAAATCTTTGCCTTGCCACCGCATATTTCTTGAA
ACCTGCATGGTAAAATTAATCAAATCGCGTTGCCGGCGATGGGCACCTGCGTGCGTGCGTGC----AGGGGAGGACGCTG
CAGTTGGACGTGTTGATGTGGTCGCCCTTGCTGCGGAAGCTCGTGTACATGGTGGAGAAGTACGTGATGGCGGTGCCGCA
GGGCCTGAGGGACGCGGGGACGATGAGCGTGGCTCTCAACGGGGAGCCGGTGACCATGTACACTGACCCGGGACTCGCGC
TCGCCACCGGCTGGCTCAAGGTCGGGGGCTACCTCTACTACGGGTCGCTGGCAAGCTCGTACATCAGCAGGGTCGACCTC
ACCAAATCATCCATCGAAGCCTAGCTAGCTAGGACGGTCAACTCATCATCTCTCGATTGATTAATTGTTCGTTCTG----
----ATGATGAACTCGTGGTACTTTTTTTT--------------------------------------------------
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>chr1D_553
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-----------------------------CCATTTTTCGGGCTTCCTCTCGTTGGACTGAGGTGGTTATAGCATGAACTA
TGTACTATGTTGAGTTGTTGACAATCTTCAGAAATCAGAACCGTTTCTCACTTAAGTTTCACCAATCGAGAAGACAAAGG
TAGATCAATTGACTTTGGCAGGC----AAAAGGTCCTTGGCAAAAACTCGCTATGTTGAGATGATACTTCGCGAAAAAAG
AAGAAGAGATGATACTTCGCAAAATCTTGGCATAGAGAA---------------------------TGGCCCACCAAATT
GCACGAGGCAGTCAAGTCTTTCTGATTCTCTATTAGTACTAGTTGCATCGTGGTACAGCTCAACGCTCACATGACAAACG
AGAAGCATCACATCACAGACATGAGTTGACTTCCATAATGAGGAAATTACTAGTCAGATAACCAGTAACAGCGCTAATCA
GCAGTCACAGTATCGGAAAATTACTGAAGACCGTTGGATGGCCAATTGGCAGGGCTTGCTAAAGGTGAGGCCGGACAAGA
CGGTGGAGATGCTGACGGACGCGGCGGAGGGCCTCAAGTTCGCCCTGACGGACGGCGTGGACATCGCCGCCGACGGCACC
ATCTACTTCACCGACGCCTCGTACAAGTACAGCCTCGCGGACCACTTTCTGGACGTGCTCGAGGCACGGCCCCACGGCCG
GCTCATGAGCTTCGACCCCTCCACGCGCCGGACCTCCGTGCTCGCCCGCGACCTCTACTTCGCCAACGGCGTCGCCGTCG
CGCCGGACCAGGACTCGCTTATCTTCTGTGAGACGGTCATGTAAGCAATGCACACCCCGCCCGTTGTGCGTACATATGAA
GCTCGTACGCTTCGA-----TCTGACCGGCTGACGCCATTGACTGCAGGAGGAGGTGCTCGAGGTACCACATCAGGGGCG
ACAAGGCAGGCACGGTGGAGAGCTTCATCGACAGCCTGCCGGGGCTCCCGGACAACATCCGATACAACGGCG---AGGGC
CGGTACTGGATCGCGCTCTCGGCGGTACGCACAATTTTGCAGCCG-AAAATCTTTGCCCTGCCACCGCATATTTCTTGGA
ACCTGCATGGTAAAACTAATCAAATCGCGTTGCCGGCGATG--------CGTGCGTGCGTGC----AGGGGAGGACGCTG
CAGTTGGACGTGTTGATGTGGTCGCCCTTGGTGCGGAAGCTCGTGTACATGGTGGGGAAGTACGTGATGGCGGTGCCGCA
GGGCCTGAGGGACTCGGGGACGATGAGCGTGGCTCTAAACGGCGAGCCGGCGACCATGTACACTGACCCGGGACTCGCGC
TCGCCACCGGCTGGCTCAAGGTCGGGGGCTACCTCTACTACGGGTCGCTGGCAAGCTCGTACATCAGCAGGGTCGACCTC
ACCAAATCATCCATCGAAGCCTAGCTAGCTAGGACGGTCAGCTCATCATCTGTCGATTGATTAATTGTTCGTTCTG----
----ATGATGAACTCGTGGTACTTTTTCTTT---AAGGGGAGTTGT----------------------------------
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>chr5A_2175
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-------------------------TATTACTAGCACATATGCCCGTGCGTTGCAACAGGAGAGATAACTGATATGTCCG
TCAAAATATTCATCACCACAGCCCAACAACATTCGAATGGTGCCACCCGCCCACGACAGAGAGCTGCACACTAAGGTCTA
GCATTTGGTAT------------ATTTGATATGGGTTTTCTATGACGATTCTAATCCTAAAGAGCCTAATTTTCAAATGT
TTTATACCAAGGCATTATTTGGAGGTTGAAGCCATGTTTGAAATCTGCATCAAATCATGAAAAAATAACAATAAAATGGT
TATTGTAAATGCGTTTTAGGCAATCTCTGCAAACACTTGAAGATTAATTAAAAGAAATGTTTGTGTATGAGGGAAACAAA
CCTAGTTTGTTGCATTCAACTCGACGCTTACGTAGTGCCTCTCACTTTCCTAGTTGCATTATTTTTATTGCACATCACGG
TCGCACGCTCCGCAGCAACACTTATATGTCTGCCCCTTTCACATCTCTTGATATCAATTCCTTTTTGTCATTTTATGTAT
GCCACGCCCTTGGTATTAGTACCAATTCCTTTATGTTATCCTCTCCTTCATATTTTTTTAATCTCC----CCTTTTTTTT
ATGTCCATTGATCACACCCTTTATTCTCTCGTATTTTTATTACATATGCCATTCGAAGCCGGTATTTCATACTTAATTTA
GCGCCACAACATCCCATGAAATATAAGCCACATGTAAGCCCACCTTTGTTTCCTTATTCTCGAGGTGTT
>chr5D_2176
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--------------------------ATGACTAGCACATATGCCCGTGCGTTGCAATGGGAGAGATAATTGATATGTCCG
CCAAAATATTCATTACCACAGCCCAACAACATTCGAATGGTGCCACCCACCCACGACAGAGAGCTGCACACTAAGGTCTA
GCAGAAATTCATATAAGTTGTACATTTGGTATGGGTTTTCTATGATGATTCTAATCCTAAAGAGCCTAATTTTCAAACGT
GTTATACCAAGGCATTATTTGTAAGTTGAAGCCATGTTTGAAATCTGCGTCAAATTGTGAAAAAATAACAATAAAAGGGT
TATTGTAAATGCGTTTTAGGCCATCTCTGCAAACACTTGAAGATTAATTAAAAGAAATGTTTGCGTGTGAGGGAAACAAA
CCTAGTTTGTTGCATTCAACTCGACGCTTACGTAGTGCCTCTCACCTTCCTGGTTGCATTATTTTTGTTGCACATCACGG
TCGCACGCTCCGCAGCAACACTTATATGTCTGCCCCTTTCACATCTCTCGATATCAATTCCTTTTTGTCATTTTATGTAT
GCCACGCCCTTGGTATTAGTACCAATTCCTTTATGTTATCCTCTCCTTCATATTTTTT-AATCTCCCATTC--TTTTTTT
ATGTCCATTGATCACACCCTTTATTCTCTCATATCTTTATTACATATGCCATTCAAAACCGGTATTTCATACTTAATTTA
GCGCCACAACATCCCATGAAATATAAGCCACATGTAAGCCCACCTTTGTTTCCTTATTCTTGAGGCGTT
>chr7A_2178
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----------------------------GACTAGCACATATGCCCGTACGTTGCAATGGGAGAGATAATTGATATGTCCG
TCAAAATATTCATCACCACAGCCCAACAACATTCGAATGGTGCCACCCGCCCACGACAGAGAGATGCACACTAAGGTCTA
GCAGAAATTCATATAAGTTGTACAATTGGTATGGGTTTTCTATGACGATTCTAATACTAAAGAGCCTAATTTTCAAATGT
TTTATACCAAGGCATTATTTGTAGGTTGAAGCCATGTTTGAAATCTGCATCAAAACGTGAAAAAATAACAATAAAATGGT
TATTGTAAATGCGTTTTAGGCCATCTCTGCAAACACTTGAAGATTAATTAAAAGAAATGTTTGCGTATGAGGGAAACAAA
CCTAGTTTGTTGCATTCAACTCGACACTTACGTAGTGCCTCTCACCTTCCTAGTTGCATTATTTTTGTTGCACATCACGG
TCGCACGCTCCGCAGCAACACTTATATGTCTGCCCCTTTCACATCTCTCGATAACAATTCCTTTTTGTCAT---------
---------------TTAGTACCAATTCCTTTATGTTATCCTCTCCTTCATATTTTTTTAATCTCC----C--TTTTTTT
ATGTCCATTGATCACACCCTTTATTCTCTCGTATTTTTATTACATATGCCATTCAAAACCGGTATTTCATACTTAATTTA
GCGCCACAACATCCCATGAAATATAAGCCACATGTAAGCCCACCTTTGTTTCCTTATTCTCGAGGTGTT
>chr1A_2179
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-----------------------------ACTCGCACATATGTCCGTGCGTTGCAACGGGAGAGATAATTGATATGTCCG
TCAAAATATTCATCACCACAGCCCAACAACATTCGAATGGTGCCACCCGCCCACGACAGAGAGCTGCACACTAAAGTCTA
GCAGAAATTCATATAAGTTGTACATTTGGTATGGGTTTTCTATGACGATTCTAATCCTAAAGAGCCTAATTTTCAAATGT
TTTATACCAAGGCATTATTTGTAGGTGGAAGCCATGTTTGAAATCTGCATCAAATCGTGAAAAAATAACAATAAAATGGT
TATTGTAAATGTGTTTTAGGCCATCTCTGCAAACACTTAAAGATTAATTAAAAGAAATGTTTGCGTATGAGGGAAACAAA
CCTAGTTTGTTGCATTCAACTCGACACTTACGTAGTGCCTCTCACCTTCCTAGTTGCATTATTTTTGTTGCACATCACGG
TCGCACGCTCCGCAGCAACACTTATATGTCTGCCCCTTTCACATCTCTCGATATCAATTCCTTTTTGTCATTTTATGTAT
GCCACGCCCTTGGTATTAGTACCAATTCCTTTATGTTATCCTCTCCTTCATATTCTTTTAATCTCC----CG-TTTTTTT
ATGTCCATTGATCACACCCTTTATTCTCTCGTATTTTTATTACATATGCCATTCGAAACCGGTATTTCATACTTAATTTA
GCGCCACAACGTCCCATGAAATATAAGCCACATGTAAGCCCACCTTTGTTTCCTTATTCTCGAGGTGTT
>chr6A_2179
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-----------------------------ACTAGCACATATGCCCGTGCGTTGCAACGGGAGAGATAATTGATATGTCCA
TCAAAATATTCATCACCACAGCCCAACAACATTCGAATGGTGCCACCCGCCCACGACAGAGAGCTGCACACTAAGGTCTA
GCAGAAATTCATGTAAGTTGTACATTTGGTATAGGTTTTCTATGACGATTCTAATCCTAAAGAGCCTAATTTTCAAATGT
TTTATACCAAGGCGTTATTTGTAGGTTGAGGCCATGTTTGAAATCTGCATCAAATCGTGAAAAAATAACAATAAAATGGT
TATTGTAAATGCGTTTTAGGCCATCTCTGCAAACACTTGAAGATTAATTAAAAGAAATGTTTGCGTATGAGGGAAACAAA
CCTAGTGTGTTGCATTCAACTCGACACTTACGTAGTGCCTCTCACCTTCCTAGTTGCATTATTTTTGTTGCACATCACGG
TCGCACGCTCCGCAGCAACACTTATATGTCTGCCCCTTTCACATCTCTCGATATCAATTCCTTTTTG--ATTTTATGTAT
GCCACGCCCTTGGTATTAGTACCAATTCCTTTATGTTATCCTCTCCTTCATATTTTTTTAATCTCC----CG-T-TTTTT
ATGTCCATTGATCAGACCCTTTATTCTCTCGTATTTTTATTACATATGCCATTCTAAACCGGTATTTCATACTTAATTTA
GCGCCACAACATCCCATGAAATATAAGCCACATGTAAGCCCACCTTTGTTTCCTTATTCTCGAGGTGTT
>SNPs
----S-----------------------S-------S-------------------------------------------
------------------------------------------------------------S-------S-----------
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-----S----------S---------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S-S--------------------------------------------
------------S-------------------------------------------------------------------
--S---------------------------------S---------------S-----------S---------------
------S------------S-----------------S---------S--------------------------------
-------S----------S--SSSSSS----S----------------------------------S-------------
------------------------------------------S-------------------------------------
-----------S----------------------------------------------------S--S------------
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-----------------------------SS-------------------------------------------------
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----------S-----S-----------------S------------S-SS-----S--S-S-S-------------SS-
-------S-----------------------------------------------------S----------------SS
------------------------------------------------------------------------SSS-----
----------------------------------S-SS-------------S------S-SS------S-----------
--S-----S-----------------------------------------------------SSSS--------------
--------------------------S-----------------------------------------------------
---------------------------------------------------S--------------------S-------
----------------------------------------------------------S---------------------
---------------S------------SSS--S-S-SSS-------S-----S------S--------------SSSSS
SSSS----------------S----------SSS------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------------
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--------------------------------------------------------------------S-----------
---------------------------------------------------------------------------S-S--
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----------------------------------S-------------S----------------------------S--
--------------S-----------------------------------------------------------------
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-----------------------------------------------------------------------S--------
---------------------------------------------------------------------
>forward_625
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---------------------------------------------CTCTCGTCGGATTGAGGTGC---------------
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>reverse_1979
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----------------------------------------------------------CTACATCAGCAGGGTCGACC--
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>forward_1669
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-------------------------------------------------ATTTTTGCCGTATCACCGCG-----------
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>reverse_2735
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--------------ACAACACTTATATGTCTGCCCCT-------------------------------------------
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---------------------------------------------------------------------
