>input_sequence_65094
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------------------------------------------------ACATTAAAAGCCGCTAATAA------------
----------TTCAACTTCCGCTCACAACTCACAGCTTTTGGCGGTACAGAGTACAACCAGATCGAAAAGGCAAACTCCC
GGCATCCTCTCCTCCTACAAGTTGAAGAGCTAGCCG----CACTCATCTCCGCTGCCACTCCATTCTTGCCACCACAG--
---AGTCGTCAGGCAAGCGCGCCGCCCATACGTCCATGGAGAGGTCAAGGTCCTACTCAGAGAAGAGCAGCAGCACCACC
ACCACCCCGGCCGGCGCCGTCACCGAGCTGAGGTGCTACAGTGCCTCCTACGCCACACCCAAGAAGGCAGCGGGCACCAC
CAGCTGGCCTCCTTGTACTACAGCTTCTTCCTCGACGTCGGCAGCGGCGGCCGGCTCGAAGGCGAGGTCGTGGAGCGGCA
GCTTCCGTAGCGCCCCGGCGGAGCTGCGGAGGAAGAGGAGGGTGGCCGGGTACAGGGTGTACGGCGTGGAGGGGAAGATG
AAGGTGTCGCTCAAGAACGGCGTGAGGTGGCTCAAGGGCAAGTGCACCCAGGTGGTGGACGGCATTTGGTGAACCCACCG
AAGG-GCAGATCAGTCGGCTTATTCTCTTTTCTGCCTGGTGATC--------CTTGCCGTGATCCAAGAGGTGTCAGAAC
GTGAGTACGGTCGCAATCTTCCTTTTCTGAGCTCTGGCGTGGTGTTTTTCCTCACT-TTTTAGTAAGAACACAAGTGGAA
GGTTGCAAAAAAGAAGGGTAACTGCAAGACTGTCTTGACCATGCATACACACTTACTAGTATGCAACCAATGGATGCTTG
CCTGTTCTTTAAAATGCACTCCCTCTGTCCCATAATGTAAACATTTTTTGATACTATATTAATGTCAAAAAACGTAGACG
GAGAGAGTACTATAAACTTGCTCTCGTTTGT----CTGGAATGTTCATCTAGCCTGGACAGTTGTAA-------------
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>chr7D_1_TraesCS7D01G363500
CCAAACTCAACTGAAATTACTACATCTAAAGTAACTAACTAGATAGCATAGTGGCGCCAAAGAAAGCATAGCATAGTGGC
GCTGAACATAGCATAGAGTTTTTGGAAAAGGGAATCTTCATAAAATCGTTATATCGAGGGGTAACAACCGCACCGAGAGA
CGATAACCAAACACCAGCCTTTGATGGAGGAGGTCCTGTCCGAAGACTACACCATTATCCATGATTAGATCGTTGTATAG
TTGTAGCACTGGAGCTCTTGCAAAATGATATATATTTTTTTAAACAAAGGCAAAAGCTTTGCCTCATCTCATTGATAAAG
AAGGGGTTTGCCTCACAGAGGGAGCCCCAGGTGTCATCGCCACTAGCATGAGATCACTAGTGTGGG-ATAACTGGGCACC
TCCTAAATGCAAATTTTTCGCTTGACTGGTAATCAAGAACAGAGTGTGGACAGCGGATAGGCTATAGAAGAGAGGGTCGC
CAAACTGTAACGTTTGCCAACTTTGTAAGAGAGAGCTTGAGACTGCGGCACACCTGCTATTCATGTGTAGGTTCTCCCTC
AGGGTATGGCACCAGATTAAACTTTGGCTGGGTATGCACGAGCTGGAGATCGATGCTTGGCCCGGTTTGCTATCCGTCGA
CGAGTGGTGGGAGAGGACGGTTCTACGCACGGACCATAGTCGTAAGGCGATGGCCTTACTATTGTTGTTGGTGGTCTGGG
AGATTTGGAGAGAA----AGGAACAAGAGGGTTTTCCAAGGCAAGTCGGCCATGCCCAATGGGGTGGTCGCCTCGATAAA
ATGTGAAGCGAGAAATTGGGTTCTTGCGGGGGCAAAAAAATTGAGCAC-GATCATGCCGTGAGAGTAATCATTTTTGTTT
CGACCATTTGTGGAGGAGTAATGGTCCTCATAACTATGTTGCAAAACGATATAGCAACGCTATACTTAGCTCACTATTTT
TTTTCTTTCATGATTTGATATGCCACGTGCTT--GTGTGACATTGCGCACATTAAAAGCCGCTAATAA------------
----------TTCAACTTCCGCTCACAACTCACAGCTTTTGGCGGTACAGAGTACAACCAGATCGAAAAGGCAAACTCCC
GGCATCCTCTCCTCCTACAAGTTGAAGAGCTAGCCG----CACTCATCTCCGCTGCCACTCCATTCTTGCCACCACAG--
---AGTCGTCAGGCAAGCGCGCCGCCCATACGTCCATGGAGAGGTCAAGGTCCTACTCAGAGAAGAGCAGCAGCACCACC
ACCACCCCGGCCGGCGCCGTCACCGAGCTGAGGTGCTACAGTGCCTCCTACGCCACACCCAAGAAGGCAGCGGGCACCAC
CAGCTGGCCTCCTTGTACTACAGCTTCTTCCTCGACGTCGGCAGCGGCGGCCGGCTCGAAGGCGAGGTCGTGGAGCGGCA
GCTTCCGTAGCGCCCCGGCGGAGCTGCGGAGGAAGAGGAGGGTGGCCGGGTACAGGGTGTACGGCGTGGAGGGGAAGATG
AAGGTGTCGCTCAAGAACGGCGTGAGGTGGCTCAAGGGCAAGTGCACCCAGGTGGTGGACGGCATTTGGTGAACCCACCG
AAGG-GCAGATCAGTCGGCTTATTCTCTTTTCTGCCTGGTGATC--------CTTGCCGTGATCCAAGAGGTGTCAGAAC
GTGAGTACGGTCGCAATCTTCCTTTTCTGAGCTCTGGCGTGGTGTTTTTCCTCACT-TTTTAGTAAGAACACAAGTGGAA
GGTTGCAAAAAAGAAGGGTAACTGCAAGACTGTCTTGACCATGCATACACACTTACTAGTATGCAACCAATGGATGCTTG
CCTGTTCTTTAAAATGCACTCCCTCTGTCCCATAATGTAAACATTTTTTGATACTATATTAATGTCAAAAAACGTAGACG
GAGAGAGTACTATAAACTTGCTCTCGTTTGT----CTGGAATGTTCATCTAGCCTGGACAGTTGTAAATAAACCAACCTA
TTTGATAGACGAGCAGGTTAGTTGCAAGGCACAATATTAAA--AAACATGGTAGGCTAAGAGCATCCATGATGCTCTCAT
GTTCGTCCAGGGTTTCGCCTGAAGCTTACAGCCCAACTGCCGCTCCTTT-TTTTCGAATT--------------TTTTAA
TCTATTTAT---CTTCAATCATGATAGTACAACGAATATCTATACCTACTAATAAAAAAAATAGATATTCTTAGTCCGTC
ATGCTATTTTATAGAAAACCCCTTGATATTTTTGACATTAAACCCGCATTACATATCAAATGTTTTTTAAGTTTATGGAA
TTTGATTAGGAAAATATATATTATGAATATAATGTTATTTTACCTGTTAACCATTTAAAAAAACACTATCTAGGGTGAAT
CTTAATCAACAGTGTATTATACGTCTTTCTTTCATGTACGTATTAAATCTACATGCAAGCCTTGTTTAAATAGAAGACAT
GTGGAATCTTGAACTTGCGCTTTTGTAGGTAAAGACAATCTTTATTTGGGCCGTAACTACAAATACTCATATTATAGACC
ATTTTTTGTAAATTAAAAGAGTGTGGTATTTTTTTCTCCCATTGCAACACACGGGCCCTTTTGCTAGTAAAAAATAATAA
AAACTAGATTCATAGATCACCTAGCGACGACTACAAGTACTGAAGCAAGCCGAAGGCGCACCGCCATCATTGCCCCTCCT
TCGACGGAGCCA--------------------------------------------------------------------
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--------------------------------GGCACAACTTGTTGTAGTAGACGGGTCGAGAAGTCGTCGTGTTAAGGT
CCCATAGGACCAATGCACCAGAACAGCAACCGCCGCTTCATTTTCAAGTTGGTCATCAAAAATGCTTTTGACTTTGAGAG
ATAGGACTACATGTTGATTTGCGGGAGAAACTAACCATGGTACGCTTAGGCCACTCCTAATGGTTATATCTTAGCATGAT
TTTAAGGTGAAAATCTTTTGTGGCATTGTTTTTCTTCGACAAAGCATAAATGTTATTGACTTAAAAT
>chr5A_350
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-----------------------------GGTGTCGTCGCCACTAGCATGAGATCACTAGTGTGGGGATAATTGGGCACC
TCCTAAATGCAATTTTTTTGCCTGGATGGTAATCAAGAACAGAGTGTGGATAGCGGATAGGCTACAGAAGAGAGGGTGAC
CAAACTGTGGTGTTTGCCAACTTTGTAAGAGAGAGCCCGAGACTGCGGCACACCCGCTATTCAAGTGCAGGTTCTCCCTC
AGGGTGTGGCGTGAG-TTAAACTTTGGTTGGGTATGCACGAGCTGGAGATCGATGCTTGGCCCGGTTTGCCATCCGTCGA
CGAGTGGTGGGAGAGAACGGTTCTAGGCACGGGCCAGAGGCGTAAGGCGACGGCTTCACTGTTGTTGGTGGTGGTCTGGG
AGATTTGGAGAGAGAGAGAGGAATACGAGGATTTTCCCGGGCAAATCGACCATGCCC-ATGGGGTGGTCGCCTCGATAAA
AAGTGAAGCGAGATATTGGGTTCTTGCGAGGGCGAAAAAAATTTAGCTTGATCATGCCGCGAGAGTATTCATTTTTGTTT
CGACCATTTGTGGAGGAGTAATGGTCCTCGTAACTATGTTTCAAA-----------------------------------
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>chr7A_911
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------------------------------------TGTTGCAAAACGATATAGCAACGCTATAGTTCACTA------TT
TCTTCTTTCATGATTTGATATGCCACGTGCTT--GTGTAACATCGCGCACATTAAAAGCCGCTAGTAATTCAAAGCACAA
CCCTGTTTTGTTCAACTTCCGCTCACAAGTCACAGCTTTTGGCGGTACAGAGTACAACCAGATCGAAAAGGCAGACTCCC
GGCGTCCTCTCCTCCTACAAGCTTAAGAGCTAGCCGCGCTCACTCATCTCCGCTGCCACTCCATTCTTGCCACCACAG--
---AGTCGTCAGGCAAGCGCGCAGCCCATACGTCAATGGAGAGGTCAAGGTCCTACTCAGAGAAGAGCAGCACCACAACC
ACCACCCCGGCCGGCGCTGTCACCGAGCTGAGGTGCTACAGTGCCTCCTACGTCACACCCAAGAAGGCAGCGGGCACCGC
CAGCTGGCCTCCTTGCACCACGGCTTCTTCCTCGACGTCGGCGGCGGCGGCCGGCCCGAAGGCGAGGTCGTGGAGCGGCA
GCTTCCGTAGCGCCCCGGCGGAGCTGCGGAGGAAGAGGAGGGTGGCCGGGTACAGGGTGTACGGCGTGGAGGGGAAGATG
AAGGTGTCGCTCAAGAACGGCGTGAGGTGGCTCAAGGGCAAGTGCACCCAGGTGGTGGACGGCTTTTGGTGAACCCACCG
AAGGTGCAGATCAATCGGCTTATTCTATTTTCTGCCTGGTGATCATTGCCGACTTGCCGTGATCCAAGAGGTGTCCGAAC
GTGAGTACGGTCACATTCTTCCTTTTGTCAGCTCTGGCGTCGTGTTTTTCCTCACA-TTTTAGTAAGAACATAAGTGGAA
GGTTGCAGGAAAGAAGGGTAGCTGC-AGACTGTCTTGACCATGCATACACACTTACTAGTATGCAACCAATGGATGCTTG
GCTGTTCTTTAAAATG----------------------------------------------------------------
-------TACTATAAACTTGCTCTCGTGTGTGTGTCTGGGATGTTCATCTGGCCTGGACGGTTGCAAATAAACCAACCTA
TTTGATAGATGAGCAGGTTAGTTGCAAGGCACAATAT-AAA--AAAAATGGTAGGCTAAGAGCATCCGTGATGCTCTCAT
GTTCGTCCAGGGTTTCGCCTGAAGCTTACAGCGCAACCGCCGCTTCTTT-TTTTTCTTCTTCTTTTAAGGAAACTTCTGA
TATATCCAT---CTTCAATCATAACAGTACAACAAACACAAAAAATAAT-------------------------------
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------------------------------------------------------------------------AATAATTA
CATCTAGATTCATATACCACCTAGTAACGACTACAAGCACTGAAGCAAGCAGAAGGCGCATCGCCATCATCGACCCTCCC
TCGACGGAGTCA--------------------------------------------------------------------
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--------------------------------AGCATAATTTATTGTAGTAGACA-GTCAAAAAGTTATCGTGCTAAGAC
CTCATAGAACCAATACACTAGAACAACAATCGCCGCTTC-TTTTCAAGTTGGTCATGAAAAGTGCTTTTGACTTTGAGAG
ATAGGACTACATGTTGATTTGCGGGAGCAACTAACCACGATACCCTTAGGCCACTCCTAATGGTTATACCTTAGCATGAT
TTTAAGGTAAAAATCTTTTGTGGCATTGTTTTT-TTCGACAAAGCATGAATTTTATTGACTTGAAAT
>chr7B_913
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--------------------------------------TTGAAAAACGACATAGCGACGCTATAGCTCACTA------TT
TTAT-TTCCATGATTGGCTATGCCACGTGCTTTCGTGTAACATTGCACACATTGAAAGTCGCTAGTAATTCAAAGCACAA
CCCTGTTTTGTTCAACTTCCGCTCATGA-------CTTTTGGCGGTACGAAGTAGAACCAGATCGAAAAGGCAGGCTCCC
GGCATCCTCTCCTCCTACAAGTTTAAGAGCTAGCCGCACTCACTCATCTCCGCTACCACTCCATTCTTGCCACCACAGCA
CAGAGTCGTCAGGCAAGCGCGCCACCCATACGTCAATGGAGAGGTCAAGGTCCTACTCAGAGAAGAGCAGCGGCGACGG-
--CACCCCGGCCAGCGCCGTCACCGAGCTGAGGTGCTACAGTGCCTCCTACGTCACACCAAAGAAGGCAGCGGGCACCGC
CGGCTGGCCTCCTTGTACTACAGCTTCTTCCTCGGCGTCGGCGGCGGCGGCCGGCTCGAAGGCGAGGTCGTGGAGCGGCA
GCTTCCGTAGCGCCCCGGCGGAGCTGCGGAGGAAGAGGAGGGTGGCCGGGTACAGGGTGTACGGCGTGGAGGGGAAGATG
AAGGTGTCGCTCAAGAACGGCGTGAGGTGGCTCAAGGGCAAGTGCACCCAGGTTGTGGACGGCATTTGGTGAACCCACCG
ACGGTGCAGATCAGTCGGCTCATTCTCTTCTCTGCCTGGTGATCATTGCCGTGATCCAAGA--CCAAGAGGTGCCCGGAC
GTGAGTACGGTCACAATCTTCCTTTTCTGAGCTCTGGCGTCGTGTTTTTCCTCACTTTTTTAGTAAGAACACAAGTGGAA
GGTTGCAGAAAAGAAGGGTAACTGC-AGACTGTCTTGACCATGCATACACACTTG---GTATACAACCAATGGATGCTTG
GCTGTTCTTTAAAATG----------------------------------------------------------------
-------TACTCTAAATTTGCTCTCGTGTGT----CTGGGATGTTCATCTTGCCTGGACGGTTGCAAATAAACCAACCTT
TTTGATAGACGAGCAGGTTAGTTGCAAGGCACAATAT-AAATAAAAAATGGTAGGCTAAGAGCATCCATGATGCTCTCAT
GTTCGTCCGGGGTTTCGCCTGAAGCTTACAGCGCAACCGCCGCTTCTTTTTTTTTCTTTTTTTTTTCCGAAAACTTTCAA
TCTATTCATTTCCTCCAATCATGGCAGTACAATGAACACAAAAAATAAT-------------------------------
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------------------------------------------------------------------------AAAAACTA
CATCGAAATTCGTAGACCACCTAGCGACGACTACAAGCACTGTAGCGAGTCGAAGGTGCGCCACCATCATCGCCCCTCCC
TCGTCGGAACCGGGCATAACTTGTTGTAGTGAACAGTCGGGAAGTCGTCGTGCTAAGGCCCCATGGGACCAATGCACCAG
AATAGCAACCGCCGCTTCTTTTCAAGTTGGTCATGAAAAATGCTTTTGACTTTGAGAGATAGGACTACATGTTGAATTGC
GGGAGCAACTAACCAGGGTACCCTTAGGCCACTCCTAATGGTTATATCTTAGAATCAAGGTAAAAATCTTTTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTTTTGTGGCATTGTTTATTTTTGACAAAGCATGAATG
CCACCATAATCGCCCCTCCCTCGTCGGAGCCGAGCATAACTTGTTGTAGTGGACA-GTCGGAAAGTCGTCGTGCTAAGGC
CCCATGGAACCAATGTACCAGAACAGCAATCGCCGCTTC-TTTTCAAGTTGGTCATGAAAAATGCTTTTGACTTTGAGAG
ATAGGACTACATGTTGATTTGCGGGAGCAACTAACCAGGGTACCCTTAGGCCACTCCTAATGGTTATATCTTAGAATC--
---AAGGTAAAAATCTTTTGTGGCGTTGTTTTT-TTTTACAAAGCATGAATCATATTGACTTGAAAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-----------------------------------S--------
------------S-----S--S--SS------------------------S-------------S------------SS-
--------SSS-------------------------SS----------------S--------S---S------------
-----S----SSS--S-----------S------------------------------------------S---------
---------------S---------S------S---S--S----------S---S-S---S------S------------
-------------S---------S-S----S------SS-----S---S--------S----------------------
-S-----------S--------------S----S------S-SSSSSS-----------S-------S------------
-----------------------------S----------------------------------S--SS--SSSSSSS--
--------------------------------------S-------------------------S---------------
----------------------------S--------------------------------------------S------
-----------------------S--------------------------------------------------------
----------------------------------S---------------------------------------------
----------------------------------------------------S-------------------------S-
------------------------------------------S-------------------------------------
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---------------------------------------------------------------------------S----
------------S---------------------------S---------------------------------------
-------S-----------------S------------------------------------------------------
S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS--------------------S-----------S----------S--------S----S---------------
-------------------------------------S--------S---------------------------------
--------------------------------S----S------S---------SSSS----------------------
------S-----------------S-----------S-SSS-S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-
S-S-------------S--------------------S--------------------------------S--------S
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--------------------------------S---S-----------------SS-----S-----------S-----S
-------S---------------------S---------S----------------S-----------------------
---------------------------S---------S-----S------------------------------------
--------S------------------------S-------------S---S----------S----
>forward_261
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-TGTAGCACTGGAGCTCTTGC-----------------------------------------------------------
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>reverse_1676
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---------------------------------------------------------------------------AGAAC
GTGAGTACGGTCGC------------------------------------------------------------------
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>forward_262
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--GTAGCACTGGAGCTCTTGCA----------------------------------------------------------
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>reverse_2113
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--------------------------------CCAACTGCCGCTCCTTTTT-----------------------------
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