>input_sequence_65060
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---------------------------------------------------ATGTTGGCAATCAATAGATGTACCTCC--
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--------------------------------------------------ACGGCTCCGCTCCGCTCTCTCCGGCCGCAG
TCACCACAACCAATGGGCGCCGTCTCGGCGTTGGCGGACGTCGTGGTGGCGCCCTTCTCACTTATCATGGCGGTCGCGGC
CCCACTGTTCGACTCCCAGGTCGTGCTCCCGCGCCGCCTCTACCCGGCGCCGCTCGTGGACATCCACCAGTGGTTCACCG
TCGCGTTCGGCCACTACCTCGTCGCCGATCCGCCGCCTTTCTTCCTCGGCCTCGTCTGGCTCGACCTGGCCTTCCTGTGG
CCCGTCTGCGTCGCCAACCTCTACGGCATCCTCACGCGCCGCCGCTGGTCGGCCGCCACCTCGCTCATGGCGGGGGTCTA
CATGCTCACCTACTTGGTACGTGCCCGTCTTGGCCCTGCGTTTGCCCCTTTCTTCTTGCTCGCTTCAAGATCCATTCGAG
TGATCAAGTGATAGCTAGCTTCTTTCATCGTTGACCAAGCGTGAAACATTTAATAATATTATCTTGATTGATTGCTGCGC
TGTCTTGGTGGTGGAAATTTGTGGACGAGAG-TATTTTTAGTGAATTTGGGAATAGAGATTTGAGAT-------------
---------AATTCCTCGAGCA------------------------TCGTTTGGTTCCGTCGACACCCGACAGGTAGTTA
ATCTTCAGTCGCTAGCACAACACTCCTATGATGGTTAATCTTTATA-TCTTGTC--------------------------
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-----------------------------------------------------------CATTTTCGTGGAAGA----TT
TTTTCTCGGTTCGTTTCTAACGGTGGCTGCAATTGTTTCAGTCCGCGATACTCGGTGACATGTTCGGCTCAGGAAAAGCA
ACGCCGAGGCTGCTTCAGCTGTATGTTCCGTTCATCGTGTTTGCTGTAACTGCAGTCTTGCGTGGTCTCTGCTCATGCTC
AGTGCCGTTTACTGCTGTTACATCGGCTGCA---TCAGCTCAGAAGAAGAAAGCCTAG----------------------
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>chr3D_1_TraesCS3D01G100000
AAGTGCGTAGCCCCGCGGACAGGGAGCGCGTCGATGTCGAGTGGTGCCTCCTAGAGCCAAGCGGAGTCGTTGGCGACGAA
GGTGAGCGCGCCGAGACGGATCTCGTGCCCCTCGGCCAAACCTCCACCGGAAACCATGATGATGGGAGTCGGAGAAAATG
CAAGTTTCACCAGAAAAAACGCTAAAACACCTGCCCCACGGTGGGCGCCAACTGTCGTGGTACTAATGCTGACAGTAGAA
AGGGGGGTAGGTT-ATGGAGAGGC-AGGTCCTAGCTACGGTGAAGTTGTTGACAAGTGTTTTATGAGTTCAGGCACTTCT
CT-GAGGAAGTAACAACCCTACGTCTCGGAGCCCGGAGGCGGTCGACTGGAATATGAATGTGTGTG-TTACA-GGGG--T
-GCGAACCCTTGTGCCAATGGAGGGGGGTGGCTTATATAGAGTGTGCCAGGACCCCAGCCAGCCCACGACGCCAAGGGTT
CAATGTACATTAAGGTAGGACGTTACAGGTAACGCCAGCAGTAAAAGGTATTAAATGATCATCAAGTCTACAGAGTAAAC
ACTCGGCCGTTGTTGT--AGAGTAACCTTTAATCTTCTATGCGTCGAGTGCTTTCTGGTACGGTCGAGTG-CTTTGATCC
TTCCGAATGGAATGTCTTATGTTGAGTGGATGATGATATCCCTCCAATGCTGCTGACTTTAGGGTAATGCCCTTAGGGAG
GGTGTCTAGGTCAGGCCTGTAACCCTACCCTAGGCACATAACTTCGTCACCTGGTGCACCGTTCAATACATTGTGATTGC
ACAGCCCATAACTTGCCTCTCTACAAGTTTCAGGGTGAGAATGTTGTGCTTGAGTATGGAGTAGCGGCAACATTTGATCA
CTCAGTTTCATGAAGACATGTGTGATTGGGAAACTCACGTGCAACTGCAAAATAATTTGGTTGAGCATATATGGACTCAT
GTTGGCAATCAATAGATGTATCTTCTTTTATTCGTTTACATATATGGACTCATGTTGGCAATCAATAGATGTACCTCC--
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--------------------------------------------------ACGGCTCCGCTCCGCTCTCTCCGGCCGCAG
TCACCACAACCAATGGGCGCCGTCTCGGCGTTGGCGGACGTCGTGGTGGCGCCCTTCTCACTTATCATGGCGGTCGCGGC
CCCACTGTTCGACTCCCAGGTCGTGCTCCCGCGCCGCCTCTACCCGGCGCCGCTCGTGGACATCCACCAGTGGTTCACCG
TCGCGTTCGGCCACTACCTCGTCGCCGATCCGCCGCCTTTCTTCCTCGGCCTCGTCTGGCTCGACCTGGCCTTCCTGTGG
CCCGTCTGCGTCGCCAACCTCTACGGCATCCTCACGCGCCGCCGCTGGTCGGCCGCCACCTCGCTCATGGCGGGGGTCTA
CATGCTCACCTACTTGGTACGTGCCCGTCTTGGCCCTGCGTTTGCCCCTTTCTTCTTGCTCGCTTCAAGATCCATTCGAG
TGATCAAGTGATAGCTAGCTTCTTTCATCGTTGACCAAGCGTGAAACATTTAATAATATTATCTTGATTGATTGCTGCGC
TGTCTTGGTGGTGGAAATTTGTGGACGAGAG-TATTTTTAGTGAATTTGGGAATAGAGATTTGAGAT-------------
---------AATTCCTCGAGCA------------------------TCGTTTGGTTCCGTCGACACCCGACAGGTAGTTA
ATCTTCAGTCGCTAGCACAACACTCCTATGATGGTTAATCTTTATA-TCTTGTC--------------------------
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-----------------------------------------------------------CATTTTCGTGGAAGA----TT
TTTTCTCGGTTCGTTTCTAACGGTGGCTGCAATTGTTTCAGTCCGCGATACTCGGTGACATGTTCGGCTCAGGAAAAGCA
ACGCCGAGGCTGCTTCAGCTGTATGTTCCGTTCATCGTGTTTGCTGTAACTGCAGTCTTGCGTGGTCTCTGCTCATGCTC
AGTGCCGTTTACTGCTGTTACATCGGCTGCA---TCAGCTCAGAAGAAGAAAGCCTAGATTTTCTTTTTGCGGGTAAAAG
AAAGTCTACATTTAAATTTGTATTTATCATATTTCAAGATTCAAGAAGAAAGTAGTCAAGTTCAAATCGATGTAAATGTA
TAAGTACTTGTTAAAAGACTGTGTATCTTTCCTTCCATTATTAAGCACTAGCACCGTAAAATATCACCTTCTGTCACGAC
AGCCACGACCCCACCGCTGTCAAGTTTAAGACTTGAATTATGTTGGGCTGAGTATACCACTGTTCTTATAACCATCCAAC
CATAGATTGGTTTGCCCTAACACCGTAGCTAAGAATGTGTTTGGTAGCATTCTCAACACATCATATATGTTACAGACATG
CTACGTGTAGATATATTGAGTACATGCAATTGTTATTATTTGGTAAAGGGTAGCCCGGTGCATGTAGCTCCCGCCTGCGC
AGAGTCTGGGGAAGGGTCCGACCACTTTGGGTCTATAGTACGCAACCTTTCCCTACATTTCTGTAAAGAGGTTGTTTCCA
AGACTTGAACCCTAGCGGTATTTTTTTCGATAAAGGCTGAATTTTTTTTGAAACGGTCGGGGGGGGGGGGAGGCTCCCCA
CCTGAATATATTTCAAAATAAGTTTTTTTTTTGTTTTTACAAACTACAGTAGGTGAGAAGAAAAGAAGTCTCGCCACAAG
CCGGCGTGGACTTTGTCTTCCGCCATTCTGAGGCGGTGGGACCAGAGGGTGAGGTCAGAGATAATTCCTCTAAGAACATC
GGGGGCAGGAGTATCGATATCCCTAAAAGTTTTGGCATTACGAGCATCCCATATTTTCCATGTGATGAGCAGCACAATGA
GAGGCCACACGGACTCTGGTAGGCCCCGATGGGTAGGAGAAGTCCATAGCGCTGCAAAGGGGGAGAAGCATGGAAGAAAA
CCAATGGCGTCCCAAATAGACCGAGCAGCTGGGCAGGTGAAGAAGAGGTGAGCACGGTCCTCTGGTGCGGCCCCGCATCG
GGGGCATGATGGAGACTC
>chr3D_1
AAGTGCGTAGCCCCGCGGACGGGGAGCGCGTCAATGTCGAGTGGTGCCTCCTGGAGCCAAGCGGAGTCGTCGGCGACGAA
GGTGAGCGCGCCGAGACGGATCTCGCGCCCCTCGGCCAAACCTCCACCGGAAACCATGATGATGGGAATCGGAAAAAATG
CAACTTTCACCAG-AAAGATGCTAAAACACCTGCCCCACGGTGGGCGCCAACTTTCGTGGTACTAATGCTGACAGTAGAA
AGAGGGGTAGGTT-ATGGAGAGGC-AGGTCCTAGCTACGGTGAAGTTGTTGACAAGTGTTTTACGAGTTCAGGCCCTTCT
CT-GAGGAAGTAATAGCCCTACGTCTCGGAGCCCGGAGGCGGTCGACTGGAATATGAATGTGTGTG-TTAGAGGGGG--T
-GCGAACCCTTGTGCCAGTAGAGGGGGGTGGCTTATATAGAGTGCGCCAGGACCCCAGCCATCCCACGACGTCAAGGGTT
CAATGTACGTTAAGACATGGCATTACTGGTAACGCTAGCTATAAAGGACTATAAATGATCTTTAAGATTACAGAGTAAAT
ATCCGGCCATTGCTGT--AGAGTGACCTTTAATCTTCTTCACGTCGAGTGCTTTCTGGTGCGGTCGAGTG-CTTTGATTC
TTCCGAGTGGAATGTCTTATGTCGAGTGAATGATGATATCCCTCTAATGCTGCTGACTTTAGGGTAATGCCCTTAGGGTG
GGTATCTAGGTCAGGCATGTAACCCTACCCTAGGTATATAACCTCATCAC------------------------------
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>chr3D_1
AAGTGCATCGCCCCGCGGACGGGGAGCGCGTCGACGTCGAGTGGAGCCTCCTGGAGCCAAGCGGAGTCGTCGGCGACGAA
GATGAGCGCGCCGAGACGGATCTTGCGGCCCTCGACCAAACCTCCGCCGGAAACCATGATGATGGGAGTCGGGGAAAACG
CAACTTTCACCGG-AAAAACGCTAAGATACCTGCCCCACGGTGGGCGCCAACTGTCATGGTACTAATGCTGACAGTAGAA
AGGGGGTAGG--T-ATGTAGAGGCAAGATCCTAGCTACGGCGAAATTGTAGACACGAGTTTTACGAGTTCAGGCCCTTCT
CA-GAGGAAGTAACAACCCTACGTCTCGGAGCCCGGAGGCGGTCGACTACATTATGTGTGTATGTGATTACA-GGGG--T
-GCGAACCCTTGTGCCTGTGGAGGGGGGTGGCTTATATAGAGTGCGCCAGGACCCCAGCCAGCCAACGACGCCAAGGGTT
CAATGTACATTAAGATGGGACGTTACAGGTAACGCCAGCAGTAAAGTGTCATAAATGATCATTAAGTCTACAGAGTGAAC
GTCCGGCCATTGCTGCTCAGAGCGACCTTAGACCTTTTGTGTGTCGAGTGGTTTCTGGTACGGTCGAGTGACTTTACTCC
TTCCGAGTGGAACGTCTCTGGTCGAGTGGATGATGATATCCCTCCAATGCTTCTGACTTTAGGGTAATGTCCTTGGGGAG
GGTGTCTAGGTCAGGCATGTAACCCTACCCTAGATACATAGCTTCGTCACC-----------------------------
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>chr3D_1
AAATGCGTAG-CCCGCGGACGGGGAGCGCGTCGACGTCGAGTGGTGCCTCCTGGAGCCAAGCGGAGTCGTCGGCGACAAA
GCTGAGCGCTCCGAGATGGATCTCGCGCCCCTCGGCCAAACCTCCACCGGAAACCATGATGATGGGAGTCGGAGAAAATG
CAACTTTCATCGG-AAAAACGCTAAAACACCTGCCTCACGGTGGGAGCCAACTGTCGTGGTACTAATGCTGACAGTAGAA
AGGGGGTAGG--TGATGGAGAGGC-AGGTTCTAGCTACGGTGAAGTTGTTGACAAGTGTTTTATGAGTTCAGGCCCTTCT
CT-GAGGAAGTAACAGCCCTACGTCTTGGAGCCCAGAGGCGGTCGACTGGAATATGAATATGTGTG-TTACA-GGGGGGT
-GCGAGCCCTTGTGCCAGAGGAGGGGGGTGGCTTATATAGAGTGCGCCAGGACCCCAGCCATCCCACGACGTCAAGGGTT
CAATGTACGTTAAAACATGGCGTTATTGGTAACGCTAGCTATAAAGGACTATAAATGATCTTTAAAACTACAGAGTAAAT
ATTCGGCCGTTGCTGT--AGAGTGGCCTTTAATCTTCTTCACGTCGAGTGTCGTCTGGTGCGATCGAGTG-CTTCGATCC
TTCCGAGTGGAATGTCTCATGTCGAGTGAATGAAGATATCCCTCTTATGCTGATGGCTTTAGGGTAATGTCCTTAGGGCG
GGTATCTAGGTCAGGCCTATAACCCTGCCCTAGG----------------------------------------------
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>chr5D_1
AAGTGCGTAGCCCCGCGGACAGGGAGCGCGTCGATGTCGAGTGGTGCCTCCTGGAGCCAAGCGGAGTCGTCGGCGACGAA
GGTGAGCGCGCCGAGACGGATCTCGCGCCCCTCGGCCAAACCTCCACCGGAAACCATGATGACGGGAGTCGGAGAAAATG
CAACTTTCACCGG-AAAAACGCTAAAACACCTGCCCCAAGGTGGGCGCCAACTGTCATGGTACTAATGCTGACAGTAGAA
AGGGGGGTAGGTT-ACGGAAAAGC-AGGTCCTAGCTACGGTGAAGTTGTTGACAAGTGTTTTACGAGTTCAGGCCCTTCT
CT-GAGGAAGTAACAGCCCTACGTCTCGGAGCCCGGAGGCGGTCGACTGGAATATGAATGTGTGTG-TTACA-GGGG--T
-GCGAA-CCTTGTGTCAGTGGAGGGGGGTGGCTTATATAGAGTGCGCCAGGACCCCAGCCAGCCCATGACGCCAAGGGTT
CAATGTACATTAAGGTAGGACGTTACAGGCAACGCCAGCAGTAAAAGGTATTAAATGACCATCAAGTCTACAGAGTAAAT
GCTCGGCCGTTGTTGT--AGAGTGACCTTTAATCTTCTTTACGTCGAGTGCTTTCTGGTACGGTCGAGTG-CTCTGATCC
TTCCGAGTGGAATGTCTTATGTCGAGTGGATGATGATATCCCTCCAATGCTGCTGACTTTAGGGTAATGCCCTTAGGGTG
GGTGTCTAGGTCAGGCCTGTAACCCTACCCTAGGCACATAACTTCGTCA-------------------------------
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>chr7D_1
AAGTGCGTTGCCCCGCGGACAGGGAGCGCGTCGATGTCGAGTGGAGCCTCCTGGAGCCAAGCGGAGTCGTCGGCGACGAA
GGTGAGCGCGCCGAGACGGATCTCGCGACCCTCGGCCAAACCTCCACCGTAAACCATGATGATGGGAGTCGGATAAAATG
CAACTTTCACCGG-AAAAACGCTAAAACACCTGCCCCACGGTGGGCGCCAACTGTCGTGGTACTAATGCTGAAAGTAGAA
AGGGGGGTAGGTT-ATGGAGAGGCAAGGTTCTAGCTATGCTGAAGTTGTTGACAAGTGTTTTACGAGTTCAGGCCCTTCT
CA-GAGGAAGTAACAACCCTACGTCTCGGAGCCCGGAGGCGGTCGACTGGATTATGTGTGTATGTGATTACA-GGGG--T
-GCGAACCCTTGTGCCAGTGGAGGGGGTTGGCTTATATAGAGTGCGCCAGGACCCCAGCCAACCCATGACGCCAAGGGTT
CAATGTACATTAAGGTAGGACGTTACAGGTAACGCCAGCAGTAAAAGGTATTAAATGACCATTAAGTTTATAGAGTGAAC
GCTCGGCCGTTGTTGC--AGAGTAACCTTTGATCTTCTATGCGTCGAGTGCTTTCTGGTATGGTCGAGTG-CTTTGATCC
TTCCGAGTGGAATGTCTTATGTCGAGTGGATGATGATACCCCTCCAATGCTTCTGACTTTAGGGTAATGTCCTTAGGGAG
GGTGTCTAGGTCAGGCCTGTAACCCTACCCTGGGTACATAGCTTCGTCA-------------------------------
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>chr7D_1
AAGTGCGTAGCCCCGCGGACAGGGAGCGCGTCATTGTCGAGTGGACCCTCCTGGAGCCAAGCGGAGTCGTCGGCGACGAT
GGTGAGCTCGCCGAGACGGATCTCGGGACCCTCGGCCGAATGTCCACCGAAAACCATGATGATGGGAGTCGGAGAAAATG
CAACTTTCACCGG-AAAAACGCTAAAACACCTGCCCCACGGTGGGCGCCAACTGTCATGGTACTAATGCCGACAGTAGAA
AGGGGATAGG--TTATGGAGAGGC-AGGTCCTAGCTATGGTGAAGTTGTTGACAAGTGTTTTACGAGTTCAGGCCCTTCT
CTTGAGGAAGTAACAGCCCTACATCTCGGAGCCCGGAGGCGGTCGACTGGATTATATGTGTATGAGATTACA-AGGA--T
-GCGAACCCTTGAGCCAGTGGAGGGGGGTGGCTTATATAGAGTGCGCCAGGACCCCAGCCAGCCCACGACGCCAAGGGTT
CAACGTACATAAAGGTAGGACGTTACAGGTAACGCCAGCAGTAAAGTGTATTAAATGACAATTAAGTCTACAGAGTGAAC
GCTCGGCCGTTGTTGC--AGAGTAACCTTTGATCTTCTATGCGCCGAGTGATTTCTGGTACGGTCAAGTG-CTTTGCTTC
TTCCGAGTGGAACGTCTCTGGTCGAGTGGATCACGATACCCCTCCAATGCTTCTGAATTTAGGGTAATGTCCTTAGGGAG
GGTGTCTAGGTCAGGCATGTAACCCTACCCTAGGTACATAGCTTCGTCACC-----------------------------
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>chr7D_1
AAGTGCGTCGCCCCGTGGACGGGGAGCGCGTCGACATCGAGTGGAACCTCCTGGAGCCAAGCGGAGTCATCGGCGACGAA
GGTGAGCGCGCCGAGACGAATCTCGCGGCCCTCGGCCAAACCTCTGCCTGAAACCATGATGATGGGAGTCGGGGAAAATG
CAACTTTCACCGG-AAAAACGCTAAGACACCTGCCCCACGATGGGCGCCAACTGTCGTGGTACTAATGCTGACAGTAGAA
AGGGGGTAGG--T-ATGTAGAGGCAAGATCCTAGCTACGGTGAAGTTGTTGACAAGTGTTTTACGAGTTCAGGCCCTTCT
CA-GAGGAAGTAACAGCCCTACGTCTCGGAGCCCGGAGGCGGTCGACTGGATTATATGTGTATGCGATTACA-GGGG--T
-GCGAACCCTTGTGCCTGTGGAGGGGGGTGGCTTATATAGAGTGCGCCAGGACCCCAGCCAGCCCACGACGCCAAGGGTT
CAATGTACATTAAGGTAGGACATTACAGGTAACGCCAGTAGTAAAGTGTCTTAAATGATCATTAAGTCTACAGAGTGAAC
GCCCGGCCGTTGTTGC--AGAGTGATCTTAGATCTTTTGTGCGTCGAGTGGTTTCTGGTACGGTCGAGTGACATTGATCC
TTCCGAGTGGAACGTCTATGGTCAAGTGGATGATGATACCCCTACGATGCTTCTAACTTTAGGGTAATGTCCTTAGGGAG
GGTGTCTAGGTCAGGCCTGTAACCCTACCCTAGGTACATAGCTTCGTCA-------------------------------
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>chr6D_1
AAGTGCGTAGCCCCGCGGACATGGAGCGCGTCGACGTCGAGTGGTGCCTCCTGAAGCCAAGCGGAGTCGTCGGCGACGAA
GGTGAGCACGCCGAGACGGATCTCGCGCCCCTCGGCCAAACCTCCACCGGAAACCATGATGATGGGAATTGGCGAAAATG
CAACTTTAACCGG-AAAAATGCTAAAACACCTGCCCCACGGTGGGCGCCAACTGTTGTGGTACTAATGCTGACAGTACAA
AGGGGGTAGG--TTATGGAGAGGC-AGGTCCTAGCGATGGCGAAATTGTTGACAAGTGTTTTACGAGTTCAGGCCCTTCT
CT-GAGGAAGTAACAACCCTACGTCTCGGAGTCTGGAGGCGGTCGATTGGAATATGAATGTGTGTG-TTACT-GGGG--T
TGCAAACCCTTGTGCCAGTGGAGGAGGGTGGCTTATATAGAGTGCGCCAGGACCCCAGCCAGCCCACGACGCCAAGGGTT
CAATGTACATTAAGTCATAGCGTTACTGGTAACACTAGCTGTAAAGGACTATAAATGGTCTTTAAGACTACAGAGTAAAT
GTCCGGCCATTGTTGT--CGAGTGACCTTTGATCTTCTTCACGTCGAGTGCTTTCTG-TGCGGTCAAGTG-CTTCGATCC
TTTCGAGTGGAATGTCTTATGTCGAGTGAATGATGATATCCCTCTAATGCTGCTGACTTTAGGGTATTGCCCTTAGGGTG
GGTATCTAGGTCAGGCCTGTAACCCTACCCAAGGTATATAACCTCATCA-------------------------------
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>chr2D_1
AAGTGCGTCGCCCCGTGGACGGGGAGCGCGTCGACGTCGAGTGGAGCCTCCTGGAGCCAAGCGGAGTCGTCGGCGACGAA
GATGAGCGCGCCGAGACGGATCTCGCGGCCCTCGGCCAAACCTCCGCCGGAAACTATGATGATGGGAGTCGGGGAAAACG
CAACTTTCAACGG-AAAAACGCTTAGACACCTGCCCCACGGTGGGCGCCAACTGTCGTGGTACTAATGCTAACAGTAGAA
AGGGGGGTAGGT--ATGTAGAGGCAAGGTCCTAGCTACGGCGAAGTTGTAGACACGAGTTTTACGAGTTCAGGCCCTTCT
CA-GAGGAAGTAACAGCCCTACGTCTCGGAGCCCGGAGGCGGTCGACTGGATTATGTGTGTATGAGATTACA-GGGG--T
-GGGAACCCTTGTGCCTATGGAGGGGGGTGGCTTATATAGAGTGCACCAGGACCCCAGCCAGCCCACGATGCCAAGGGTT
CAATGTACATTAAGATGGAACGTTACAGGTAACGCCAGCAGTAAAGTGTCATAAATGATCATTAAGTCTACAGAGTGAAC
GTCCGGCCGTTGCTGCTCAGAGTGACCTTAGACCTTCTGTGCGTCGAGTGGTTTTTGGTACGGTCGAGTGACTTTACTCC
TTCCGAGTGGAACGTCTCTGGTCGAGTGGATGATGATATCCCTCCAATGCTTCTGAGTTCAGGGTAATGTCCTTGGGGAG
GGCGTCTAGGTCAGGCCTGTAACCCTACCCTAGGTACATAGCTTCGTCA-------------------------------
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>chr3B_1023
GTCGACGCTCGACAGGTAGTTAATCTCCAGTCGCTGGCAGATCACTCCTGTGGTAGTTAACCTTTATCCTCTTCTCCATT
TTCGTGGAAGATTTATTTTTCTCGGTTCCTTTTTAACGGTGGCTGCAATTATTACGGTCCGCTATACTCGTTGACATGTT
GGGCTCAGGAAAAGCAACGCCGAGGCTGCTTCAGCTGTATACTCCGTTCATCGTGGTTGCTGTAATTGCAGTTTTGCGTG
GTCTCTGCTCATGCTCAGCCCCGTTAACTGCTACAACATCGGTTGCATCTTCAGCTCAGAAGAAGAAAGCCTAGATTGAG
TTTGTGTTTGTCATATTTCAAGAAGAAAGTAATCATGTTTCACTCGATGTAAATGTACAAGTACTTGTTAAAGTACTGAT
GCATCTTTCCTTCCATTATTAAGCATTAGCACCGTAAAATATCACCCTCTGTCACGACGGCCACACGACGACGCCTGTAG
CGACCTCACACCACCACCATCAACAGCGCGAAGGGATGCCATGGTCCATTGAGGGCCCGCATGACAGTGTCTGATTTAGT
GGGCCTGTCGGGCTCGGGCAACCACCAACGACTCATGCATGCACAACACCGTTGCAAGGATGTATTTGGTACATTAAAAA
AAGGATGTGTGTTTTTTTTTTACAAAAAGGATCGGAGTTATTATAAAAGTTCATGGGGAGTACAAAGCATCTCAAACACT
GTAAAAATTCGATCAAGATTCCAAGACCATCGATGTGACTGCACAGCTCAAACATTGGATACAAAATGTAGGGACGGGAT
GGAACCCGAACGCCGCACACTTTGAATTTTGGCAAAATCACCTCATGTAAGTACAGAAATAGCCATAACGTTTCTCTAAC
ATGTGCTGCCCCAAGCTTCAACGAACACGAACAGATAAGGCTATGGAGCTCCGGCGGCGGACGTCGCCATGCGCTACGCT
GCGGCCTCATTGTGAACATGGGGAGGTAGGATGGAGGCATGAGTTAGTCAGACCGAGAAACACGTCCAACAACTTTGGAG
TATAAGCTTTCCATTCTAAGATGGTTAGCTGCCTATCACAAATAGGGAGGCCCAGTTAGATGATAGGGAATGCGGCTTAC
AATTGAGAACAGTGGCCATGTACTCACCCTCATCCATTGACATCCCCATGGCAACCATCTCGCATTTGTGAAAGTTTATC
TTGAGACTTGATATCGCCTCGAAGCAAAGCGACATCAGCTTAATTGGGCCGATGTTGTGTTGGTTCGGTTCAAATAGCAA
CACCATACCGTCCACATAGTGCAACTTCGATACCCCAGGTATAAGATGGGCCACAACACCCTTTATGCGACCCACCGCCT
TAGCTTTGTCAAGCATGGTCGAAAGAGTGCCAGCGACGAAGTTAAAGAGGAGCGGGGACAGCGGGTCACCTTGCCGAAAC
CCTATTTTGTTTTGGAAGAAGTGACCAACATCGTCGTTAATCGAAATGATTGTCTGCCCTGAGACCAGCTGCAAAACACG
ATGAACCCAACCAGCCTCGAACGTCTTTCTTTTTTTCTGGAGAAACTTCCAATCTACTCCCTCCGTTCCATATAGTCTTT
TTAGACATTTTAAATGGACTACAACATAAGGATGTATATAAACATATTTTAGAGTATAGATTCACTCATTTTGCTCCGCA
TGTAGTCACTTGTTGAAATCTCTAGTAAGACTTATATTTGAAAATGGAGGAGCACTATTCATCATCTATCATGGGTTCAC
GGCAGTACATTTCAAAGAAAATCGATCGTAGGAGCAAAACAGTCCGCAAAGAAAATCCTCTCTACAGTTGCTGCTCCACT
CCGCGTCCCTCTCTATCGTAATCTCAACGTCCACCTCCACCTCGCAGACACAGTTTCTTTCTGTCATCATACTCGTACGC
CACATACAGAGCAGCTCCTCTGTAGAAAAACAGGAACAGAGTGGTCCTCCACGGTTCCGCTCCGCTCCCTCCGGCGGCAC
CACAACAAACCAATGGGCGCCGTCTCCGCGACGGCGGACGTCGTGGTGGCGCTCTTCTCGCTGATCATGGCGGTGGCGGC
CCCGCTGTTCGACTCCCAGATCGTGCTCCCGCGCGGCCTCCACCCGGCGCCGCTCGTGGACATCCACCGCTGGTTCACCG
TCGCGTTCGGCCACTACCTCGTCGCCGACCCGCCGCCTTTCTTCCTCGGCCTCGTCTGGCTCGACCTCGCCTTCCTGTGG
CCCGTCTGCGTCGCCAACCTCTACGGCATCCTCGCGCGCCGCCGCTGGTCGGCGGCCACCTCGCTCATGGCGGGCGTCTA
CATGCTCACCTACTTGGTACGTGCCCGTCTTCGCCCTGCGTTTGCCCCTTTCTTCTTGCTTGCTTCAAGATCCATTCGAG
TGATCAAGTGATAGCTAGCTTCTTTCGTCGTTGACCAAGCGTGAAACATTTGATAATATTATCTTA---GATTGCTGCGC
TGTCCTGCTGGTGGAAATTTGTAGAGGAAGTTTTTTTTTAGTGAACTTGAGGATAGAGATTTGATAATTCAAAATTTCAA
AAAATAAAAAATTCCTCGAGGAAATTTCTTCACCAATTATATTTTTTCGTTTGGTTCTGTCAACACTCGACAGGTAGTTA
ATCTCCAGTCGCCGGCCTATCACTCCTGTGGTACTTAACCTTTATCCTCTTCTC--------------------------
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-----------------------------------------------------------CGTTTTCATGGTTTTTTTTTT
TTTGCTCGCTTCGTTTCTAACGGTGATTGCAATTGTTTCAGTCCGCGATACTCGGCGACATGTTGGGCTCAGGGAAAACA
ACGCCGAGGCTGCTCATGCT------------------------------------------------------------
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>chr3A_1023
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-------------------------------------------------------------------------CCTCC--
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--------------------------------------------------ACAGCTCCGCTCCGCTCCCTCCGGCCGCAC
CACAACAAACCAATGGGCGCCGTCTCGGCGACGGCGGACGTCGTGGTGGCGCTCTTCTCGCTGATCATGGCGGTGGCGGC
CCCGCTGTTCGACTCTCAGGTCGTGCTCCCGCGCGACCTCTACCCGGCGCCGCTCGTGGACATCCACCGGTGGTTCGCCG
TCGCGTTCGGGCACTACCTCGTCGCCTACCCGCCGCCTTTCTTCCTCGGCCTCGTCTGGCTCGACCTGGCCTTGCTGTGG
CCCGTCTGCGTCGCCAACCTCTACGGCATCCTCGCGCGCCGCCGCTGGTCGGCCACCACCTCGCTCATGGCGGGGGTCTA
CATGCTCACCTACTTGGTACGTACCCGTCTTGGTCCTGCGTTTGCCCTTTCTTCTTGCTTTGCTTCAAGATCCATACAGG
CGAAGTGA-------TAGCTTCTTTCTCCGTTGACCAAGCGACAAGCATTTCATACAAGAAAAATC-TTGATTGCTGCGC
TGCCTTGGTGGTGGAAGTTTGTGGAGGAGAG-TTTTTTTAGTGAAATGATTGATAATGTGATTCGAT-------------
---------AATTCCTTGAGCAAATTTCACCGCCAGTTG-----------TTGGTTCTGCCGACACTCGACTTGAGCAAA
TGA------------------------------------CTTTATCCTCTTGTCTTCTCGCGGAGAGTGAATTACAAAAA
ACATCGACATTGAAGGCTAGATTTACAGAAACCACAAGTCTATAATTTTGTAGGTTTCTCTGACCGCCGCCGCCGCCGCC
ACTCTAGGGCACCATGGCGACGCGGCGGCGGTGGCGGTCGGAGATGTGACAGGGTTCGACGGCGGCGAACGAGTGGGAGC
AGAGGGCGCGAGAGAATGAGGGTTGGGGGTGGGCCTGTAACGATTCGTAGAAGAGGGTACCGGCTCGAGCAGGCCCGGGC
ACGGCGTCTGACGCCGTCTAACGGCTCAGACGGATGAACAGTGCCGCCACATCGACAAAAGCGGGCCTACCTGTCATAAT
CTCACTTAAAACGACCGAACTGAGCAACTCGTGTTTTCTACAAAAAAATTAGCCTGAAAGTTAGTGTTTTTGGGCACAAA
ATTGTAGACTTGTAGTTTCTGCAAACCTAGCCTTCAATGTCGATATTTTTTACAATTCACACTCTCGCGGAAGA----TC
-TTTCTCGATTCGTTTCTAATGGTGACCGCAATTGTTTCAGTCCGCCATACTCGGCGACATGTTGGGCTCAGGAAAAGCA
ACGCTGAGGCTGCTTCAGCTGTATGTTCCGTTCATCGTGGTTGCTGTAATTGCAGTTTTGCGTGGTCTCTGCTCATGGTC
AGCGCCGTTAGCTGCTGCAACATCGGTTGCATCTTCAGCTCAGAAGAAGAAAGCCTAGATT-------------------
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>SNPs
----------------------------------------------------S-----------------S---------
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---S---------S------------------------------------------------------------------
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--------------------------------------------S-----------------------------------
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------S---------------S---------------------------------------------------------
---------------------------------------------------SSS-SSSSSSSSS---SS-SS-SSSSSSS
SS-S---SS-SSSS--SSSSS-SS--S---SSSSSSSSS-SSSSSSSSSSSS-SSSSSSSSSSSSSSSSSSS-S-SSSSS
S-SS-S-S-SSS---SSSSSSSSS-SSS-S-S-SSS-S-SSS-SSSSSSSSSSSSSSS--SS-SSSSS--SS-SSSSSS-
-SS-S-SSSSSS-SS-SS-SSSSSSS-SSSS-S-SSSSSSS-SS-S-S-SS-SSSS-SS-SS-SSSSS-SSSS-------
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-------------------------------------------------------------------S-----------S
SSSSSSS-----------------------SS--------------------S------S--S-----------S-----
---S------------------------------S---------------------------------S-----------
----------------------------S---------------------------------------------------
---------------------------------S----------------------------------------------
------------------------------------------------------------S-------------------
--------------------------S------------------------S-------------SS-------------
-------------------------S-------S-----------S---S-S----------------------------
---------------------------------------------------------S--------S-------------
----S-------SS--SS-S-------S--S-SS----S------S----------------------------------
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--------S----------------S-----------------------------S--------S---------------
---------------------------------------S---------S------S--------------------S--
--S------SS------SS-------S----------------------------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_926
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--------------------------TGGGAAACTCACGTGCAACT----------------------------------
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>reverse_4349
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----------------------------CTGGGCAGGTGAAGAAGAGG--------------------------------
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