>input_sequence_65059
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---------------------------AGAACTGGCTGCGG---------------------------------------
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---------------------------------------------AAA-ACAAAGTCGGGGAAACCCGTCGTTAATTCGC
TAGCTATTTCATCGATAGCGGCCGTCTTATCATCAAGCGCCATGACA----------ATCGACAAGGAATA---------
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--------------------------CGGCAATCTGGAGGAGCATCCATGCGTGGT---------GGCGTTCGCGGCGAT
TCTGTGCCTATTGCTCTTCGGCTTCACAATGCACGACATGAAACGGCCCGAATACTTGCCGGAGTTCTGGGTGAAGCTGC
CCGCCGTCGAGGGGCTCGAACGGGGCACCGGCGCGTCGCGGCCCCCCACCTTCAACATCACCCTCCGCGTCAACAACCGA
GACAGCGAGCCCTGGCACTTCAAGGGGCCGGGCCGCGTCGTGGTGGCGTACGCGGGCGTGCCGCTCGCCCACGCTGACCT
TGCCGAGTTCACCGTGCCCGGGGAGGTCATCAGCTCGGTGCCCATCGTCGCCACCAGCTCGGGGCTGGGGCTGCCCGACG
AGCTGTACGACCGCATGCAGAGCCAGCGGCGGCGGAGAGAGCGCGTGAAGCTGGCGGTGCACGTGACGCTGGATGGTGTG
CGGCTGTGGTGCACGGCCATACTGCACGGCCAACCACGGGGGCCGTTTGTCTGCCCGATTCTCTATGGCCCCACCTTTGA
CCGCACGGATCCCAGACAGATGATGTTCCCAATTATTTGATCAACCTTGCTATACATACGACAGAATGCCTGTCCAACAC
TACGATTAGAGACAATTGTAGATAACTCAGTTTATGGGACATAGCATTTAGAGATGATATGCTCTCTCGTTGTATTAGTC
GGACGAGAAAACCATCATACGCAGAGCAGTTTCGTTATTTGATCTTCCCTCTAAGAACAAAGATCAAACTAGCTGGTGTC
TAGTAAATTTCG------ACTTTTGGAGTAGTAGTATCAAATATGGCAATTTGTACTTGAAAATAAA-------------
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>chr3B_1_TraesCS3B01G342300
TTTTGCATAGATATACATCAGTCACAAACTTTCTTGCATCAGCAAGAGTGATCTAAACGCTCTTATATTTCTTTATAAAA
GAGAGTGCTACTCAAATCTGTAATCACGCGGACAAGAACATCTGCGAG--GAGGCGTCGGCCGTAGC------CTGTTCT
TCTTTCTCGTTAAAAATCCTTACCTTCTGCACGATCATGTCTTGGGGGAACCCGGTGTCAGTAGAGGGTGTGTCTTCCTT
GTACGTCGTGATGTCGACGTCGAGCTCCACCGC-----------------------------------------------
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-------------------GCCTGAGCGCCAGTCCGACGCCATGCGGTCGCGGAGGCGCTGCGACAGCCCAACCCCGGCT
CCCCGGGCCACCACCTCCACGTCCTTGGCCCACCGCCTCTTGACGCAGTCCCGCGGGTCCACCCGCGCCCAGCCGAGCGC
GACGCCGGAGTACATCACGGTCACGTCCGCGCGGTCGACGCAGGTGTCGTTCAGACGGAGCGTGATGTTGAAAGCCGGCG
AGACCACACGGCCGGCGGCGCCAGGGTCCATGCCGTCGTAGCCCATGAGGTGGACGGAGACGACGGGGGGGCTTCGACGG
---TCCATGACCGTGGACAATGCTACCATCAACAAGACAGAAATCAGTGCAGAT---------ACTAGGAGCGTGACGAA
AGACGACTCCTCGCTGCGACGGTAGGGTTTGGCGGCCGCCCCAGCTTCTAGATCGTCGCTGACTTGACCCATATGCCCCA
GCTTCTAGATAG----TC-AAGACAAC-----TCCCTGGAACAACAAATAGACATGGGAGAAAGAGGACACGGAATTTGA
GAAGGAAAAAAACGGGG-CCTTTTCTTGTTCGAACTTATAAGGA----GAGTCCTTATCCTTCTCCAAAGTTCAGATTCT
----------------------------------------AAACTGTCTTGGATTCTAATATCGTTCAGATTCTAACAAG
GGCCGTAAGTTCAGTATCTA--TATATATGGATCGATTTCCTCTCTGAAATCTAGTCCACGAGGCGG--A--TATATATC
CAACAGTCGCACGCGAGCGATGCGATCAGAACTGGCTGCGG---------------------------------------
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---------------------------------------------AAA-ACAAAGTCGGGGAAACCCGTCGTTAATTCGC
TAGCTATTTCATCGATAGCGGCCGTCTTATCATCAAGCGCCATGACA----------ATCGACAAGGAATA---------
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--------------------------CGGCAATCTGGAGGAGCATCCATGCGTGGT---------GGCGTTCGCGGCGAT
TCTGTGCCTATTGCTCTTCGGCTTCACAATGCACGACATGAAACGGCCCGAATACTTGCCGGAGTTCTGGGTGAAGCTGC
CCGCCGTCGAGGGGCTCGAACGGGGCACCGGCGCGTCGCGGCCCCCCACCTTCAACATCACCCTCCGCGTCAACAACCGA
GACAGCGAGCCCTGGCACTTCAAGGGGCCGGGCCGCGTCGTGGTGGCGTACGCGGGCGTGCCGCTCGCCCACGCTGACCT
TGCCGAGTTCACCGTGCCCGGGGAGGTCATCAGCTCGGTGCCCATCGTCGCCACCAGCTCGGGGCTGGGGCTGCCCGACG
AGCTGTACGACCGCATGCAGAGCCAGCGGCGGCGGAGAGAGCGCGTGAAGCTGGCGGTGCACGTGACGCTGGATGGTGTG
CGGCTGTGGTGCACGGCCATACTGCACGGCCAACCACGGGGGCCGTTTGTCTGCCCGATTCTCTATGGCCCCACCTTTGA
CCGCACGGATCCCAGACAGATGATGTTCCCAATTATTTGATCAACCTTGCTATACATACGACAGAATGCCTGTCCAACAC
TACGATTAGAGACAATTGTAGATAACTCAGTTTATGGGACATAGCATTTAGAGATGATATGCTCTCTCGTTGTATTAGTC
GGACGAGAAAACCATCATACGCAGAGCAGTTTCGTTATTTGATCTTCCCTCTAAGAACAAAGATCAAACTAGCTGGTGTC
TAGTAAATTTCG------ACTTTTGGAGTAGTAGTATCAAATATGGCAATTTGTACTTGAAAATAAATTATATATCTTTT
TACCGAAAAACTTCCAACCTATTTCTTTTCAATCATGCAGTACAATGAAGACCAAAAATAATAAAAATTACATCCAAATC
TGTAGAAAACCTAGTGACGACTACCTAGGCAAAACTTGTTGTAGTAGAGAGTCAGGAAGTCATTTTGCTAAGGCCCCATA
GGACCATGGTGCCAGTACATCAACTGCTGCCGTTGAAGAGTAGCGTATATCAAAAGAATCCAACTTGAAGATACACAAAT
GTACATGAACTACGACTAGATCCGAGCAAATCCACCAAGTACAGATCCATCAAAGACACACCTCCACACTTCCACCGACG
ATGCTAGACGCACCATCAAAACGGAGGCTAGGCGAGGAGAACCTTATTCCATCATAAGTTTTCTATATGCGAGATTTCAA
TTCATTCAAAAATCGAAGTGTTTTTTAAGAAAGAATCCCTTTTTTAGGGAAGGTCATCATAGCTAGCTGTATTACTTAGA
AGGAACTACATCGTCCACAAGTACGGAACCAGACAACCCAGAGGTTCGTCTGACCAGCTAAAAAAAATCTTATTACAAAA
ACTAAAATTGTCTAGCACAAGCGCCCCCTTGTTACTAGAACCAAAACAATGTTTGAACACAACGTTTCCAATTAAAGACG
CAACATCCACCGACTCCACGAATATTGCCGCTGATGCATCCCACTATCTAAATTGACCATCACATAAATTCATAACATTC
CGATTCCGCCTCTACTCGATATAACCCTAGGGAGTTTGCAAATACAAGCCCATCACGCATTGCCAAAGCTTCAGTAGTCA
ACACATCTGCCCCACGATCAATGTACTTGCACTCAGCAGCAAGAAAGTTTCCCTTGTCATCTCTGATGATAAATGTTGTA
GCTCCTGCTCCCTCGTTAAGAAAAAATGCCGCATCTACATTAACTTTTAAAACTGAGGGTAGCTTTAGTCCAGGTCATGT
CCCTGTCCGAACACGGTCTATAGTTTT
>chr3D_89
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--------TACTCAAATCTGTAATCACGCGGACCAGAACATTTGCGAGAGGAGGCGTCGGCTGTAGC------CTGTTCT
TCTTTCTCGTTAAAAATCCTTACCTTCTTCACGATCATGTGTTGGGGAAACTCAGTGTCAGTAGAGGGCGGGTCTTCCAT
GTACGTCGTGACGTCGACGTCGAGCTCCACCGCGCC--------------------------------------------
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----------------------CGAGCGCCAGTCCGACGCCATGCGGTCGCGGAGGCGCTGCGACAGCCCCACCCCGGCT
CCCCGGGCCGCCACCTCCACGTCCTTGGCCCACCGCCTCTTGGCGCAGTCCCGCGGGTCCACGCGCGCCCAGCCGAGCGC
GACGCCGGAGTACATGACGGCCA----CGCGCGGTGGACGCAGGTGCCGTTCAGACGGAGCGTGATGTTGAAAGCCGGCG
AGACCACGCGGCCGGCGGCGCCAGGGTCGATGCCGTCGTAGCCCGTGAGGTGGACGGAGACGACGGAGGGGATTCGACGG
---TCCATGACCGTGGACAATGCTACCATCAACAAGACAGAAATCAGTGCAGAT---------ACTAGGAGCGTGACGAA
AGACGACTCCTCGCTGCGACGGTAGGGTTTGGCGGCCGCCCCAGCTTCTAGATCGTCGCTGACTTGACCCATATGCCCCA
GCTTCTAGATAG----TC-AAGACAAC-----TCCCTGGAACAACAAGTAGACATGGGAGAAAGAGGACACGGAATTTGA
GAAGGAAAAAAACGAGG-CCTTTTCTTGTTCGAACTTATAAGGA----GAGTCCTTATCCTTCTCCAAAGTTCAGATTCT
----------------------------------------AAACTGTCTTGGATTCTAATATCGTTCAGATTCTAACAAG
GACCCTAAGTTCTGTATCTATATATATATGGATCGATTTCCTCTCTGAAATCTAGTCCACGAGGCAGGTA--TATATATC
CAACAGTCGCACGCGAGCGATGCGATCAGAACTGGCTGCGG---------------------------------------
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---------------------------------------------AAA-ACAAAGTCGGGGAAACCCGTCGTTAATTCGC
TAGCTATTTCATCGATAGCGGCCGTCTTATCATCAAGCGCTAATATCCATGGGAGCCATCGACAAGGAATA---------
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--------------------------CGGCAATCTGGAGGAGCATCCATGCGTGGT---------GGCGTTCGCGGCGAT
TCTGTGCCTATTGCTCTTCGGCTTCACAATGCACGACATGAAACGGCCCGAATACTTGCCGGAGTTCTGGGTGAAACTGC
CCGCCGTTGAGGGGCTCGAACGGGGCACCGGCGCGTCGCGGCCCCCCACCTTCAACATCACCCTCCGCGTCAACAACCGA
GACAGCGAGCCCTGGCACTTCAAGGGGCCGGGCCGCGTCGTGGTGGCGTACGCGGGCGTGCCGCTCGCCCACGCTGACCT
TGCCGAGTTCACCGTGCCGGGGGAGGTCATCAGCTCGGTGCCCATCGTCGCCACCAGCGAGGGGCTGGGGCTGCCCAACG
AGCTGTACGACCGCATGCAGAGCCAGCGGCGGCGGAGAGAGCGCGTGAAGCTGGCGATGCACGTGACGCTGGATGGTGTG
CGGCTGTGGTGCACGGC-------------CAACCACGGGGGCCGTTTGTCTGCCCGATTCTCTATGGCCCCACCTTTGA
CCGCACGGATCCCAGACAGATGATGTTCCCAATTATTTGA----------------------------------------
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------------------------------------------TCTCCCCTCTAAGAACAAAGATCAAACTAGCTGGTGTG
TAGTAAATTTCGTGGAAAACTTTTGGAGTAGTAGTATCAAATATGGCAATTTGTACTTTAAAATAAATTATATATCTTTT
TACCGAAAAACTTCCGACCTATTTCTTTTCAATCATGCAGTACAATGAAAACCAGAAATAATAAAAATTACATCCAAATC
TGTAGACAACCTAGCAACGACTACCTAGGCAAAACTTGTTGTAGTAGAGAGTCAGGAAGTCATTTTGCTAAGACCCCATA
GGACTATCATGCCAGGACATCAACTGCCGCCGTTGAAGAGTAGCGTATATCAAAAGAATCCAACTTGAAAATACACGAAC
GTAGATGAACTACGACCAGATCCGAGTAAATCCACTAAGTACAGATCCATCAAAGACACACCTCCACACATCCACCGACG
ATGCTAGACGCACCATCAAAACGGGGGCTAGGCGAAGAGAACCTTATTCCATCTTAAGTTTTCTATATGCGAGATTTCAA
TTCATTCAAAAATCGAAGTGTTATTTAAGAAAGAAT-CCTTTTTTAGGGAAGGTCATCATGGCTAGTTCTATTACTTAGA
AGGAACTACATCGTCCACAAGGGTT----------------------GTCTGACTAGCTAAAAGAAATCTTATTACAAAA
ACTAAAATTGGCTAGCACAAGCGCACCCTTGTTACTAGAACCAAAACAATGTTTGAAGACAACGTTTCCAATTGAAGACA
CAACATCCACGGACTCCACGAATATTGCCGCTGATGCATCCCACTATCTGAATTG-------------------------
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>chr3A_89
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--------TACTCAAATCTGTAATCACGCGGACCAGAGCATTTGCGAG--GAGGCGTCGGCTGTAGC------TAGTTCT
TCTTTCTCGTTAAAAATCCTTACCTTCTTCACGATCATGTGTTGGGGGAACTCAGTGTCAGTAGAGAGCGGGTCTTCCTT
GTACGTGGTGACGTCGACGTCGAGCTCCACCGCGCCTGAGGCCAACTCCACCGCGTGATCCTATCCTGTCCGGTCCCGTC
CGTTTGGGATAAAACGGACGAATAGCGCGGCCCAGCGCGCGACCTCAAACGGACAAATGTCTTGATTTCGTCCGTTTTCG
ACCTATCTCCGTCCCAAATTTGCGCTCGGTTTGGAGTGAAACGGACGCGCGCGGACGGCCTGGACGCACGCCCTTGTCCT
CCCCATGGCCCGCCTGTCGAGGACACTAGCAGTCCCTCCGCTCCCAACGCTTTCACTCTCTCTCTCCCGCCTCGCCCCGC
CTCGCCCCGCCGCCGGCGCCGCTGCTATTATCCGGCCGCCTCCTCACCGCGCAGCCTCCGGCCGTCCCTACCAAACCACG
TCTTGACATGGCCGCGACCACGTCCGCACTTTGGACGTAGTTTTGGCCGTCGATCGGAGGTTTGGCCGTCGCCGTCTTTG
CCGGCGGCAGAGGGGACACGACCGCCGGCGACGTACCACGGCGGCCTCGACAGCTTCAGACGAGAGCTCCAGAGCGGCCA
GTAGACGGTCGGCAACCACCCCTGCTGCGTCGAGGTGATCATCGCGGCCTCTTCGCCACCACGACCGCAAGGTGTTCAGT
ATTTTGCCCACAAAGATATGGACAGTGAAGACGAGTTTTTCTTCCATCACTTCCTTTGTTCATCGGACGATTCGTCGTCA
GATATGAAGATCTTGTGGTGGCTGCACTGGTCGTTCACGACCACATTCAACGACAGCTTCCTCAGTACAGGGGGTCAGTT
CCTGGCCGTGCTCCCAACCTGAACCGCAAACAGGGAGAGAGGCCACGCCCTGCTCTATGCCGATTACTTTGCCAACACCG
CTCTTCAAGCCGGATAAATTCCGTCGCCGTTTTCTAATGGCAAGGCATGTGTTCAATCGTATCCGAGAGGGAGTGGTTGC
TCATGACCCATACTTCGGGTGCAAGACGGATGCCCTTGGCAAGCTTGGATTCTCCTCTTACCAGAAATGCACCGCGGCCA
TCCGCATGCTTGCATATGGAATTTCAGGCGATCTGGTGGATGAGTATGTGCGTATGAGTGAGACAACATGTCTGATGTCA
ATGTACAAGTTTTGCCAGGCTGTGATCGAGGTGTTTGGCCCAGAGTACTTGAGGCAGCCAATTGTCGCTGATACAGAGAG
ATTCTTGATGACCAACGCAGCTAGAGGCTTTCCAGGCATGCTTGGCGGCATAGATTGTATGCACTGGGAGTGAAAGAACT
GTCCATTTGCTTGGCAGGGCCAGTACAAGGGGCATGTCAACGGGTGCACTGTCATAGTAGAAGCGGTGGCATCGCAGGAT
CTTTGGATATGACATTCTTTCTTCGGCATGGCAGGTTCTCACAATGATATCAACGTGCTGCAGCATTCTTCAGTCTTCGC
GAGGCTTGCAGAAGGCCACTCCCCACCTGTCAACTTTGAGATCAACGGCCACCAGTACAACAAGGGATACTATCTAGCAG
ATGGTATATATCCTCAGTGGTCAACTTTTGTGAAGACAATCTCGAAACCCCAAGGTGAGAAGAGAAAGAGATTTTCCCAA
ATGCAAGAGAGTGTTAGAAAGGATGTGGAGTGTGCTTTTGATGTGCTTCAATCCCGATGGGGTATCGTTCGAAACCCTGC
ACTGTCATGGGATAAAAGGAAGCTTTGGGAGGTGATGACTGCTTGTGTGATCATGCACAACATGATCGTCGAGGACGAGC
GTGATGAGAGTATCTTCGACCAAGGATTTGATTATCAAGGTGAAAATATTGAGCCCCTGCACCAAGACCCGACCACATTT
GAATAGTTTGTCCAATTCCACCGTGAGATGCGTGATTGGCACACTCATTTGAATCTTCAAAATAACTTGGTTGAGCACGT
GTGGGATCACATTGGCAACCAATAGATGTATTGGTCCATTTTATGTTCAGTCAAGACAATTTCGATTTGGTTGTAAAACA
ATTTTATTAAAGACAATTTCAATTGGGTTGTAAAACTATTTTAATTTTCAGACAAATATTTGGGTTGTAAAACTAGTTTT
GATAAAAATATGGGCATTTTTGGCCCTGAAGGACAGGATGGGCCAAAGGGATGCGGCCGCACGCTGGGCGCGCGGCCACC
GCATCCCAGGACATGCCCGGACACAACCCCATTGCCCTACCCAAACGGACAGAAAATCAGACAAAACAGACGTCTGTTTG
GGGTCGTGCGGTGGAGTTGGCCTGAGCGCCAGTCCGACCCCATGTGGTCGCGGAGGCTCTGCGACAGCCCCACCCCGGCT
CCCCGGGCCGCCACCTCCACATCCTTGGCCCACCGCCTCTTAGCACAGTCCCGCGGATCCACACGCGGCCAGCCGAGTGC
GATGCCGGAGTACATCACGGCCACGCCGGCGCGGTCGACGCAGGTGTCATTCAGACGGAGTGTGATGTTGAAAGCCGGTG
AGACCACGCGGCCGGCGGCACCAGGGTCGATGCCATCGTAGCCCGTGAGGTGGACGGAGACGACGGCGGGGCTTCGACGG
---TCCATGACCGTGGACAATGCTACCATCAACAAGACAGAAACCAGTGCAGAT---------ACTAGCAGCGTGACAAA
AGACGGCTCCTCGCTGCGACGGTAGGGTTTGGCGGCTACCCCAGCTTCTAGATCATCGCTGACTTGACCCATATGTATGC
AC-----GATCG----TC-AAGACAAACTCGATCCTTTGAATGACAAATAGACGTGGGAGAAA-----------------
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>chr3B_96
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---------------ATCTGTAATCACGCGGACCAGAACATTTGCGAG--GATGCATCGGTTGTAGC------TTGTTCT
TCTTTCTCGTTAAAAATCCTTACCTTCTTCACGATCATGTCTTGGGGGAATTCAGTGTCAGTAGAGGGCGGGTCTTCTTT
GTACGTCGTGACGTCGACGTCGAGCTCCACCGCGCCTG------------------------------------------
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------------------------AGCGCCAGTCTGACGCCATGCGGTCGCGGAGGCGCTGCGACAGCCCCACCCCGGCT
CCCCGGGCCACCACCTCCACGTCCTTGGCCCACCGCCTCTTGACGCAGTCCCGCGGGTCCACCCGCGCCCAGCCGAGCGC
GACGCCGGAGTACATCACGGCCACGTCCGCGCGGTCGACGCAGGTGTCGTTCAGACGGAGCGTGATGTTGAAAGCCGGCG
AGACCACACGGCCGGCGGCGCCAGGGTCCATGCCGTCGTAGCCCGTGAGGTGGACGGAGACGACGGGGGGGCTTCGACGG
---TCCATGGC---GGACAATGCTACCACCAACAAGACAGAAATCAGTGCAGATCCTAGATATACTAGGAGCGTAACGAA
AGACGACTCCTCGCTGCGACGGTAGGGTTTGGCGGCCGCCCCAGCTTCTAGATCGTCGCTGACTTGACCCATATGTATGC
AC-----GATCG----TCTAAGACAAACTCGATCCTTGGAACAACAAATAGACGTGGGAGAAAATTCCTGGGGGAAAGGC
CTTGGTGGTTCGTTGGATCCTTTTCTTGTTCGAACTTAC--GTA----GAGTCCTTATCCTTCTCCCGAGGTACGTAGTA
GTACGTATTTAGTTGTTTGGGATTCTTTTTGTTTTGAAGGAAATTGTTTGGGATTCTGACATCGTTCAGATTCG------
------------------------TATATGAATCGATGTCCC----GAAGTCTAGTCCACGAGGCACGTATGTACTATGA
ATATAT-------------------CCAGAACTATAGCGCT---------------------------------------
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------------------------------CT---TTACCCTACCAAAAATTAAGTCCGGCGGTCCGGTCGTTGTTTCAT
CGAATGC----------GCGGCCGTCTTGTCATC-GGCGCTGATATCCATGGGAGCCATCCACAAGGAAGATGAA-----
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---------------------GAAGGCGGCAATCCGGAGGAGCACCCATGCGTACGGTGCGCGTGGGTGTTGGCGATGAT
TATGTGCGTATTGGCCTGTGGCTTCACGATCTACAACACGGAGCCGCCCGAATACTTGCCCGAGTTCTGGGTGAAACTGC
CCGCCGTGGAGGGGCTCGACCGGGGCACCGGCGCGTCGCGGGCCCCCTCCTTCAACATCACCCTCCGCGTCAACAACCCA
GCCGGCGAGCCCTGGCACTTCAAGGGGCCGGGCCGCGTCGTGGTGGCGTACGCGGGCGTGCCGCTCGCCCACGCTGACCT
TGCCGAGTTCACCGTGCCGGAGGAGGTCATCAGCTCGGTGCCTATCTTCGCCACCAGCGACGGGCTGGGGCTGCCCGACG
AGCTGTACGACCGCATGCAGAGCCAGCGGCGGCGGCGAGAGCGCGTGAAGCTGGCGGTGCACGTGACGCTGGATGGTGTG
CTGCTGTGGTGCACGGCGATACTGCACGGGACGCCACGGGGGCCGTTTGTCTGCCCGAGACTCTATGGCCCGACCTTTGC
CCGCACGGATCCCAGACAGATGATGTTCCCAATTATTTGATCTTCTTTTTTTTTGCGGGAAAA-----------------
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----------------------------------TTATTTGATCTTCCCTCTAAGAAAAAAGATCAAACTAGCTGGTGTC
TAGTAAATTTCGTGGAAAACTTTTGGAGTGGTAGTATCAAATATGGCAATTTGTACTTTAAAATAAATTATATATCTTTT
TA------------------------------------------------------------------------------
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>chr3D_96
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---------------ATCTGTAATCACGCGGACCAGAACATTTGCGAG--GATGCATCGGTTGTAGC------TTGTTCT
TCTTTCTCGTTAAAAATCCTTACCTTCTTCACGATCATGTCTTGGGGGAATTCAGTGTCAGTAGAGGGCGGGTCTTCCTT
GTACGTCGTGACGTCGACGTCGAGCTCCACCGCGCC--------------------------------------------
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----------------------TGAGCGCCAGTCCGACGCCATGCGGTCGCGGAGGCGCTGCGACAGCCCCACCCCGGCT
CCCCGGGCCACCACCTCCACGTCCTTGGCCCACCGCCTCTTGGCGCAGTCCCGCGGGTCCACGCGCGCCCAGCCGAGCGC
GACGCCGGAGTACAGCACGGCCACGTCCGCGCGGTCGACGCAGGTGTCGTTCAGACGGAGCGTGATGTTGAAAGCCGGCG
AGACCACGCGGCCGGCGCCGCCAGGGTCGATGCCGTCGTAGCCTGTGAGGTGGACGGAGACGACGGAGGGTCTTCGGCGG
CGCTCCATGACC---GACAATGCTACCACCAACAAGACAGAAATCAGTACAGAT---------ACTAGGAGCGTGACGAA
AGACGGCTCCTCGCTGCGACGGTAGGGTTTGGCGGCCGCCCCGGCTTCTAGATCCTCGCTGACTTGACCCATATGTATAC
AC-----GATCG----TC-AAGACAAACTCGATCCTTGGAACAGCAAATAGACGTGGGAGAAAATTCCTGGGAGAAAGGC
CTTGGTGGTTCGTTGGATCCTTTTCTTGTTCGAACTTAC--GGA----GAGTCCTTATCCTTCTCCCGACCTACGTAGTA
GTACCTATTTT------------------------------AACTGTTTGGGATTGTGATATCGTTCAGATTCG------
------------------------TATATGAATCGATTTCCC----GAAGTCTAGTCCACGAGGCACGTATGTATATATC
CAACAGTAGCACGCGAGCGATGCGACCAGAACTATAGCTG----------------------------------------
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--------------------TGGAAAACTACTTTATTACCCTACCAAA-ATTAAGTCCGGCGATCCGGTCGTTGTTTCAT
CGATTGC----------GCGGCCGTCTTGTCATC-AGCGCTGATATCCATGGGAGCCATCCACAAGGAAGATGAA-----
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---------------------CAAGGCGGCAATCCGGAGGAGCACCCATGCGTACGGTGCGCGTGGGTGTTGGCGATGAT
TATGTGGGTGTTGGTCTGCGGCTTCACGATCTACGACAGGGAGCCGCCCGAATACGTGCTCGAGTTCTGGGTGAAGCTGC
CCGCCGTCGAGGGGCTCGACCGGGGCACTGGCGCGTCGCGGCCCCCCACCTTCAACATCACCCTCCGCGTCAACAACCGA
GACAGCGAGCCCTGGCACTTCAAGGGGCCGGGCCGCGTCGTGGTGGCGTACGCGGGCGTGCCGCTCGCCCACGCTGACCT
CGCCGAGTTCACCGTGCCGGGGGAGGTCATCAGCTCGGTGCCTATCTTTGCCACCAGCGAGGGGCTGGGGCTGCCCGACG
AGCTATACGACCGCATGCAGAGCCAGCGGCGGCGGCGAGAGCGGGTGAAGCTGGCGGTGCACGTGACGCTGGATGGTGTG
CTGCTGTGGTGCACGGCGATACTGCACGGGCAACCACGGGGCCCGTTTGTCTGCCCGATACTCTATGGCCCCACCTTTGC
CCGCACGGATCCCAGA----------------------------------------------------------------
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>chr6B_101
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--------------------TAATCACGCGGGCCAGAACATTTGCGAG--GAGGCGTCGATTGTTGTAGCTTGTTCTTCT
TCTTTCTCATGAATGATCCTTACCTTGTGCACGATCATGTCTTGGGGGAACTCGGTGTCAGTACAGGGTGGGTCTTCCTT
GTACGTCGTCACGTCGACGTCGAGCTCCACCGCGCC--------------------------------------------
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----------------------TGCGCGCCACTCCAACGCCATGCGGTCGCGGAGGCGCTGCGACAGCCCCACCCCAACG
CCCCGGGCCACCACCTCCACGTCCTTGGCCCATCGCCTCTTGGCGCAGTCCCGCGGATCCACGCGCGCCCACCCGAGCGC
GACGCCGGAGTACATCACGGCCATGTCCGCGCGGTCGACGCAGGTATCGTTCAGACGGAGCGTGATGTTGAAAGCCGGCG
AGACCACACGGCCGGCGCCGCCAGGGTCGATGCCGTCGTAGCCCGTGAGGTGGACGGAGACGGA---GGGGTTTCCCCGG
---TCCATGACCATGGACAGTGCTACCATCAACAAGACATAAATAAGTACAAATCCTAGA---AATACGAGCGTGGCGCA
ACACGTCCCCTCACTAGGACGGTAGGGTTTGGCTGCCGTCCCGGCTTCTAGGTCGTCGCTGACTTGACCCATATGTATGC
CG-----GATCGATCGTC-AAGACAGAGTCCGTCCTTGGAACAACAACAAATAGACA-----------TGGGAGAAAGGC
CTTGGTGGTTCGTTGGATCCTTTTCGTGTTCCAACTTAG--GGAGATCGAGTCCTTATCCTTCTCCCGAGCTACTACATG
TAT----TTTT------------------------------AACTGTTTGTGATTCTGCTATCGTTCACATTCTAACAAG
GACCCTGTAAGTTACTACCTCCGTCCGGGTTTATTGGTCTCTATTGTATTTCGTGCCAAATTTTGACCATAGATTAAACT
AACAAAATGTTCACGCATGTCACCAAACATTATATTTTTGAAAATTATGTTCAAATACGAATCCAATAAGATAATTTTTC
TTGACATGCATTAACATTTTGTTAGTTAAATTTTTAATCAAAATTTGACACAAACTACAAAAGGGATCTATAAACCAGGA
CGGAGGTAGTATATAGTATATGGAAATCTACT---TTACCCTACCAAA-GCTAAGTCCGGCGCATCATAAGCCCTA----
-----ATTTCAACGATAGCTATCAT---------AAGCGCTAATATCCATGGGAGCCATCCACAGGGAAGATGAACAAGG
CGGGAGTAAATAACATAAAACTACTACTTTACAGGCTAGGGTTTCAAAAAATTACCGGTTTTAAATTTTTCTCAGATAAC
TACCAAATGGACGGTCGGCTGTTTCAAAAAACCCCAAATGACCGTTGCTTAAAATTTAGACATGTTTATGACAGGTCGGG
CCCGCACCTAAACAAACCGTCTGTTTGACCGTTAGGTTGACCGTTAAGTTACAAGTGGGGCCCACATGTCAGTGTCTCTA
TCTTATATGTCCTCACTTTTTACAAAATAGCCCCTATAAACATTTCTGAAAAAGCAATCGGGTCCCTGCTATTTTTCTGA
AAAAGCAATCAAGGAGCCGCTCCTCTCCTCGCGGCCGGCGTCCACCTCTGCGCCCGGCGACATCCTGCGATCCTCCAGCG
CCGGCGCCCGCCCTCGCCACCTACTGCCACACCACCGCCCGCCTCTGCCTCTCCTCGCCTCCACATCGTGCGCCCCGCCT
CCGCGCCCGAGCTCGCGCATCTGCTGCTCGCGGCCATCGACGCCGCCGCGTGCGCCCTCCGCTGCCAGGCCCGGCGAGGC
GAGCTCTGCCGCTGGCCATCTCTGCGCCCGACCTCGCGCAACTGCTGCTTGTGGCCATGGCCTCCACGGCGTGCGCCCTC
CGCTGCCAGGCCCGGCGAGCTCTGCCGCCGGCCGTCTTGCCCGAGCTCGCGCAGCTGCTGCTCGCGGCCATGGCCTCCAC
CGCGTGCGCTCTCCACTGCCAGGCCCGGCAAGCTCTGCCGCCGGCTGTCTCCGCGCCGAGCTCGCGCAGCTGCTGGTCGC
AGCCATGGCTGCCACCGCGTGCGCCCTCCGCTGCCAGGGCCAGTGAGCTCTGCCGCCGGCCATCCCCCAGCCTTCGTTTC
TCTAGCCACTGCTCCGGGCGGCGGCCTGCACCAAAGCCGCCCATGGCGCGCGCGGCGACCGCGGGCGGAGCCCCATGGCG
CGCGGCGACGGCCACGGGCAGAGCCCTTTGGAGGCTGATTCCAGGGACCCGATTGCTTTTTCAAAATGTTTGTAAGAGCT
AATCCGTAAAAAATCTATGAATGAGGCGCTGACATGTGGCCCCCACAAGTCAGTTAACAGTCAAACAAACGGTCAACCAA
ACGGTGCGTTTACTGACGGGCCCGACCTGTCATAAACATGTTTAATTTTTTAACAATGAGGATTTGGGGTTTTTTGAAAC
AGCCAACCCCTGACTTGGTAGTTATCAGCGAAAAAAATAAATCCGATAGTTTTTTGAAACCCTAACCCGTAAAGTAGTAG
TTTTATGCTATTTACTCACAAGAAGGCGGCAATCTAGAGGAGCACCCATGCGTACGGCGCGCGTGGGTGTTGGCGATGAT
TATGTGGCTGTTGGTCTGCGGCTTCGCGATATACAACATGGAGCCGCCCGAATACTTGCCCGAGTTCTGGGTGAAGCTGC
CCGCTGTCGAGGGGCTCGACCGGGGCA----CGCGTCGCGGGGCCCCGCCTTCAACATCACCCTCCGTGTCCACAACCGA
GGCAGCGAGCCCTGGCACTTCAAGGGGCCGGGCCGCGTCGTGGGGGCGTACGCGGGCGTGCCGCTCGCCCACGCTGACCT
CGCCGAGTTCACCGTGCCGGGGCAGGTCATCGGCTCGGTGCCCATCGTTGCCACCAGCGAGGGGCTGGGGCTGCCCGACG
AGCTGTACGACCGCATGCAGGGCCAGCGCCGGCGACGAGAGCGCGTGAAGCTGGCGGTGCACGTGACGCTGGATGGTGTG
CTGCTGTGGTGCACGGCGATACTGCACGGGCAACCACGGGGGCCGTTTGTCTGCCCGATTCTCTATGGCCCGACCTTTGA
CCGCACGGATCCCAGACAAATGATGTTCGTAATTGTTTGAT---------------------------------------
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>chr3A_1110
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--------------------------CGGCAATCCGGAGGAGCACCCATGCGTGCGGTGCGCGTGGGTGTTGGCGATGAT
TATGTGGGTGTTGGTGTGTGGCTTCACGATCTACAGCACGGAGCCGCCCAAATACTTGCCCCAGTTCTGGGTGAAACTGC
CCGCCGTGGAGGGGCTCGACCGGGGCACCGTTGCGTCGCGGGCCCCCGCCTTCAACATCACCCTCCGCGTCAACAACCCA
GCCGGCGAGTCC-GGCACTTCAAGGGGCCGGGCCGCGTCGTGGTGGCGTACGCGGGCGTGCCGCTCGCCCACGCTGACCT
CGCCGAGTTCACCGTGCCGGGGCAGGTCATCAGCTCGGTGCCCATCTTCGCCACCAGCGATGGCCTGGGGCTGCCCGACG
AGCTGTACGACCGCATGCAGAGCCAGCGGCGGCGGCGAGAGCGGGTGAAGCTGGCTGTGCACGTGACGCTGGATGGTGTG
CTGCTGTGGTGCACGGCGATACTGCACGGGACACCACGGTGGCCGTTTGTCTGCCCGAGACTCTATGGCCCCACCTTTGC
CCGCACGGATCCCAGA----------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS-------------------------S-------S-------------------S------------------
---------------------------------------------------S------------------S---------
-----------S--------------------------------------------------------------------
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----------------------------------------------------------------------S---------
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--------------------S-----------------------------------------------------------
--------------------------------------------S-----------------------------------
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-S--S-------S----------------------------------------------------S--------------
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----------------------------------------S-SS-SS---------------------------------
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------------------S---------------------------------------SS--------------------
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-----------------S-----------S--------------------------------------------------
------------------------------------------SS-S--SS-S-SSSSSSS-S-SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------
----------------------------------------------------------S---------------------
---------------S---------------------------------S----S-------------------------
------S-------SS--------------------------------------------------------S-------
----S--SS------S-----------S-----------------------------------------S------S--S
---S------------S---------S--------S---------------------------------S----------
------------------------S----------S-----------------S--------------------------
----------------------S-------------S-----------------------S-----S-S-----------
---------------------SSSSSSSSSSSSSSSSSSSSSSSSSS-------S--------S----------------
----------S-------------S--------------------------------S---------------S-----S
----------S--------------------------------------S-----SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_231
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---------------------------------------------------CCGGTGTCAGTAGAGGGTGT---------
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>reverse_5928
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-------GGTGCCAGTACATCAACTGC-----------------------------------------------------
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---------------------------
