>input_sequence_65024
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---------------------------------------------------------------------ATCAATCAAAC
GCAACCAACCC-----------------------------CGA---TCGCACGCAGATCT-----------------CGG
CGCCCCGATACACACACGCGGACGTGTC--GTGTTACTGGAGTAAGTAAGCTAGCAATGGCGCACGACGCATCGGCGGCG
ACGACGGCGCAGAAGCGCAAGTACACCGAGGAGGAGGAGACGGCCGGCCTGTGCGCCAACGGCTGCGGCTTCTTCGGCGC
CGCCGCCACCGGCAACATGTGCTCCAAGTGCTACCGCGACCACGTCCACGCCGCCACCGCCGACACCGCGGCCGCGGGGA
GCGTCTACTTCATCGACCCTGCTGGCTCGACCGCGCCGCCGCCGGCGAAGAAGGCCAGGATGACCGTCGCCGTCCCGTCC
TCTGATGGTGCGGCCGCCCCCTCCGCCGCCGTGGCGGTTGACCCCGCCGTGACGCCCGCGAAGCAGCCGGCGGTGCCGGC
GAACCGGTGCGCGGCGTGCGGCAAGAAGGTGGGGCTGCTGGGGTTCCGCTGCCGCTGCGAGGGCACCTTCTGCAGCGTGC
ACCGCTACTCGGAGAAGCACGACTGTGGATTCGACTACAAGGCCGCCGGCCAGGAGCAGATCGCCAAGCACAACCCGCTC
GTGGTTGCGGACAAGATGACCGGAAGGATCTGAAGCCCACAGGAAACCACCAGATCAACAATGAACCGACCAAGCAGTTA
G-TCATGGCGTCTTCGAGGATAGA-ATCGATCAAACTTCTTTGTATTTGCTA-TAGGCCTTGGAACGTGTAAATATTAGT
TTAGGCTTCGGAGAT-ATCGAAATTTTGTAAATATTAGTTTAGAGTTTAGATTTCG----GAGATATAGGAATTTGTACC
GCGAGTCTTGAAACATTTGTTCACCTCGA-TTTTACATATATAGCAAACCACCAC------ACAACAAGTTCCAGCATAA
CATAAAAATATAATAAGTTTGC--------------TTTAAAGTC-----------------------------------
--------------------------------------------------------------------------------
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>chr5A_1_TraesCS5A01G428400
AGGATTGTTACTTCATTA-AGATCGGTTCTTGCCTCCTTAGTTACAGATCACGCTAGTGAGATAGGGCCTCATTTTTTAG
TTTCGAACAGGGCCTCGGATTTTGCCGGCCCGCCCTTGTGTCCTTGGTGGAGGGGAGCCGCCAGAGGATGGGCCGAAAGG
CTGTAGGTCGCACTAGGTAAAACAAGATCTTCACCCCCATCGTCCGGTCATTGCTTCTGACGCTAAACAGGTGATTGCGG
ACATTCAGAAAGGTGGGCGAGGAAACATTGGAGCAATTATTAGCGAGAACAAGCTACATGTGTTGTCTTTTGACTGTATT
TTTAATTTTGAAGGTTGTGATGTCAATGTTGAAGCACATAGTTTAGCCAAGTTTCCACTTTCGTTAGGTCTGGGAC-GTC
ATGTCTGGCTTGGCCAATCCCATGACCAAAACTATCCCAATTTATTTCCTGCAAATAAAAAAATATCCCAATTTCTATGG
TGTTTGATGAATAAAACTTGGTTTACCCCT-AAAAAAAGTAAAACAAGATCGTCTTTCTTCTTCCACGAAAGGAAAGAAA
ACGATAGCCCTAATTGCGCGCTTGCGTACGTGTCTGCCTCTAATTCACGAAGAAAGGAAACGA-----------------
-----TAGCCCAAACTCGTACGTGTGTCTGCCCTAGTTTCCTTAT-ATAGGCGACAACTGAT------------------
-------------------------------------------GAAACTTCCTTGTA-----GTATCTTT---GTAATCC
TTAGGGCACCT-GATCTCAAACGGCATAAGAGCGCACGCTACCGAGTGAGTGTA---------AAAAAAGAGAA---ACT
ATGCCGACCGACGTAGACCGTACTTCCGCCGCTAACCCGT-CTTGCCTTGTTGCGTTGCACTGACGCTCGGTTCAGTGTT
ATTATCGTGCCGACACCGGGAGCCGTACGTGTTGCTTGGCCGCTTCGGGCACTGATGCGAGTCCTGCCAGGACTATGATC
AGCACCGCGCGCGTCGGTCACACGGTCGCCCGTATTATAAAGGTTCCACACCCACGCGCAACCCAGCCCATCAATCAAAC
GCAACCAACCC-----------------------------CGA---TCGCACGCAGATCT-----------------CGG
CGCCCCGATACACACACGCGGACGTGTC--GTGTTACTGGAGTAAGTAAGCTAGCAATGGCGCACGACGCATCGGCGGCG
ACGACGGCGCAGAAGCGCAAGTACACCGAGGAGGAGGAGACGGCCGGCCTGTGCGCCAACGGCTGCGGCTTCTTCGGCGC
CGCCGCCACCGGCAACATGTGCTCCAAGTGCTACCGCGACCACGTCCACGCCGCCACCGCCGACACCGCGGCCGCGGGGA
GCGTCTACTTCATCGACCCTGCTGGCTCGACCGCGCCGCCGCCGGCGAAGAAGGCCAGGATGACCGTCGCCGTCCCGTCC
TCTGATGGTGCGGCCGCCCCCTCCGCCGCCGTGGCGGTTGACCCCGCCGTGACGCCCGCGAAGCAGCCGGCGGTGCCGGC
GAACCGGTGCGCGGCGTGCGGCAAGAAGGTGGGGCTGCTGGGGTTCCGCTGCCGCTGCGAGGGCACCTTCTGCAGCGTGC
ACCGCTACTCGGAGAAGCACGACTGTGGATTCGACTACAAGGCCGCCGGCCAGGAGCAGATCGCCAAGCACAACCCGCTC
GTGGTTGCGGACAAGATGACCGGAAGGATCTGAAGCCCACAGGAAACCACCAGATCAACAATGAACCGACCAAGCAGTTA
G-TCATGGCGTCTTCGAGGATAGA-ATCGATCAAACTTCTTTGTATTTGCTA-TAGGCCTTGGAACGTGTAAATATTAGT
TTAGGCTTCGGAGAT-ATCGAAATTTTGTAAATATTAGTTTAGAGTTTAGATTTCG----GAGATATAGGAATTTGTACC
GCGAGTCTTGAAACATTTGTTCACCTCGA-TTTTACATATATAGCAAACCACCAC------ACAACAAGTTCCAGCATAA
CATAAAAATATAATAAGTTTG--------------CTTTAAAGTCGTATTAAAGTTAATACATTTATTTTGAGATGGAGG
AAGTATCACAAATATGCCTAAAAG-GAAAAGAAAAGGTTAATACAATAGCTACGCGGAGCCGCCCAAGCACCAGCTAAAG
CCTTGTACAATGTAAAGTGTTTA---GGGGAGATGCTTGGTAAACTAAACCATGTTTTTTTCTCAAATATCCATGCTTAT
CTTTACAGCAG-----GGGTGCTTAATTAAGCGTCTGCCGTCTACAAATAAGCACTGGTGTTTAAGAAAATATGGTTTAT
ATTTTTCTAAGCACCTTGCATTG-------TATAATGCCTAAAAGATATGCAATATGGAGCCCG------------CACT
GATAATCCCGCCAAGTCACTCGATGTTCCGCTGTCTAGTAAGCGAGTGCCAGTGCACGTCGCAAAAAGACACCCTCAATC
ATCATTTTGTTACGCGTTGTTCATAGGGTCTAGACCATCGCTGCGAACACTCGCTTGAAGAGACGTCTCCTCCTACCGGT
ACGGTTGGACTGGGTTTACAGGAACTATCCATGATTTGAGGCCTGCCATTTAGGCCTAGAGCCTTATGGACAAAACTCCT
AGAAAA-CGGGCTGCGGACATGAGAAGACAATGTGGGTCCAAAACTCAGACACTACACACAGAAAATTACCATCGCCCGG
CCCATGCCGCTTGGAGACCTCCATCCCCGAGGGGAAGTTACGGCGCAACAACTGCCAAACAAAGATCTTAATCTCTAGCA
AAAGCGGCACTTTCCACAAAGGAGTGGCCCATGCCAGCATCGGCACACGACATAGGCCGCCAAGTCCCCAACGAGGCTAG
GTGCCCAAAGATAGTATCCGGAGAGTTTGTCAGAACCGGAGGGGGAGCCTCACTCAATTCAGCCCAAGCAAGGAGCTCGT
TAGACCCAAATGTTTGTCAGAACGAGATGTTTCAATTTTCATTATGGGCAGTTGAGGGAACCAAAAGCATTGAGTTCGAG
GAAATCGCAAAAAAAGCAAGGGAATAAGCGTGCG
>chr5D_3
--GATCGCTACTTCATTAGAGACCGGTTCTTGCCTCCTTAGTTAAAGATCACACTAGTGAAATAGGGCTTCATTTTTTAG
TTTCGCATATGACCTCGGATTTTGCCGGCCCGGCCCTGTGTCCTCAATGGAGGGGAGCCGCCAGAGGACGGGCCGAACGG
CTGTAGGTCGCACTAGGTAAAACAAGATCTCCGCCTCCATCGTTTGGTCATTGCTTCCGACGCTAGACACGTGACTGGGG
ACATCCAGAAAGGTGGGTGAGGAAACAATGGAACAATTATTAGCGAGATCAAGCTACACGCGTTGTCTTTTGATTGTATT
TTTAATTTCGAAGGTCGTGCTGTCAATGTTGAAGCACATAATTTAGCTAAGTTTTCATTTTCGTCAGGTCCGTGACAGTC
ACGTCTGGCTTGACCAATCC-ATGACCAAAACTG-----------------------------TATCCCAAATTCTGTGG
TGTTTGATGAATAAAACTTGGCTTACTCCCCAAAAAAAGTAAAACAAGATCGTCTTTCTTCTTCCACGAGAAGAAAGAAA
ACGATAGCCCTAATTGCGTTG--GCGCACGTGTCTGCCCTAATTTAATTTAAGAAGGAAGAAGGAAGGAGGAAGGAAGGA
AGGACTAGCCCTAGCTCGTACGTGTGTCTGCCCTAGTTTCCTTTTCATAGGCGACAACTGATCACGTAGTATATCATGTA
ACGCAAATTTACGGGTTGAGCTATTGTAC-AGTACGTACTCATGAAACTTCCTTGTA-----GTATGTTTGTAGTAATCC
TTAGGGCACCTCGATGTCAAACGGCATAAGAGCGCACGCTACCGAGTGAGTGTA---------AAAAAAGATATACTACT
ATC----CCGACGTAGAACGTACGTCCGCCGCTAACCCCGCCTTGCCTTGTTGCGTTGAACTGACGCTCGGTTTAGTGTT
ATCATCGTGCCGACACCGGGAGCCGTACGTGTTGGTTGGCCGCTTCGGGCACAGATGCGAGTCCTGGCAGGACTATGACG
GGCGCCGCTCGCGTCGGTCACACGGTCGCCCGTATTATAAAGGTTCCACACCCACGCGCAACCCAGCCC----ATCAAAC
GCAACCAACCCC--------------------------CTCGA---TCGCACGCAGATCT-----------------CGG
CGCCCCGATACACACACGCGGACGTGTC--GTGTTACTGGAGTAAGCT---TAGCAATGGCGCACGACGCATCGGCGGCG
ACGACGGCGCAGAAGCGCAAGTACACCGAGGAGGAGGAGACAGCCGGCCTGTGCGCCAACGGCTGCGGCTTCTTCGGCGC
CGCCGCCACCGGCAACATGTGCTCCAAGTGCTACCGCGACCACGTCCACGCCGCCACCGCCGACACCGCGGCCGCGGGGA
GCGTCTGCTTCATCGGCCCTGCTGGTTCGACCGCGCCGCCTCCGGCGAAGAAGGCCAGGATGACCGTTGCCGTCCCGTCC
TATGACGGTGCGGCCGCCTCCTCCAGCCCCGCCGCAGTTGACCCCGCCGTGACGCCCGTGAAGCAGCCGGCGGTGGCGGC
GAACCGGTGCGCGGCGTGCCGCAAGAAGGTGGGGCTGCTGGGGTTCCGATGCCGCTGCGAGGGCACCTTCTGCAGCGTGC
ACCGCTACTCGGAGAAGCACGACCGTGGATTCGACTACAAGGCCGCCGGCCAGGAGCAGATCGCCAAGCACAACCCGCTC
GTGGTTGCGGACAAGATGACCGGAAGGATCTGAAGCCCACAAGAAACCACCAGATCAACGGCGAACCGATCAAGCAGTTA
G-TCATGGCGTCTTCGAGGATAGA-ATCGATCAATCTTCTTTGTATTTG---CTAGGTCTTCGAACGTGTAAATATTAGT
TTAGGCTTCCAAGAT-ATCGAAATTTTGTAAATATTAGTTCAGAGTTTAGATTTCGATCAGAGATATAGGAATTTGTACC
GTGAGTCTTAAAACATTAGTTCATCACGA--TTTATACATAAAGCAAACCATCACGTCTATGCAACAAGTTTCAGTGTAA
CATAAGAAGATAATAAGTCTGCTGTGTAATATTCTCTTAAAAGTCGTACTAAAGGTAATACATTTATTTTCAGACGGAGA
AAATATCACAAATATGCCCAAAAC-GAAAAAAAAAG-TTGATGCAATAGCTACGCGGAGCCGACGAAGCGCCGGCTAAAG
CCTTGTACAATGTATAAGGTGCTTAGGGGGAGATGCTTGGTAAAATAAACCATATTTTTCTCGAACA-------------
-------------------TGTTTAATTAAGCGTTTGTCCTCTACAAATAAGCACCAGTGCTTAAGAAAATATGAATTAT
ATTTTTCTAAGCACCTTGCATTGTATATAATATAATGCCTAAAAGGATATG-----------CG------------CATT
GATAATCCCGCCAAGTCACTCGATGTTCCGTTGTCTAGTAAGCGGGTGCCAGTGCACATCGCAAAA-GACCCGCCCAATC
ACCATTT-GTTACGCGTTGTTCATTGGGTGTAGACCATCGCTGCGAACACTCAATAGGAGAGACGTCTCCTCCTACCGGT
ATGGTTGGACTGGGCTTATACGAACTCTCCAAGATTTGAGGCCTGCCATTCAGGCCCAGGGCCTTATGGACAAAGCTCCA
AGAAAAGCGGGCAGCGGACCTGAGAAGACAACATGGGTCCAGGACTCAGACACTACACACGGGAAAATACCATCGTCCGG
CCCATGCCGCTTGGTGACCTCCATCCCTGAGGGGAAGTGACCGCACAACAACTGCCAAACAAAGATCTTAATCTCTAGCG
AAAGCGGCGCTTTCCACAAAGGAGTGGCCCATGCCAGCATCGGCGCACGACATAGGCCGCCAACAACCCAACAAGGTCAG
GTGCCCAAAGACAGTATCCAGAGAGTTTGTCATAACCGGAGGGGGAGCCTCACTCAATTCAGCCCAAGCAAGGGTCTCCT
TAGACCCAAATGTTTGTCAGAACGAGATGTTCCAATTCCCATTATGGGCAGTTCAGGGAACCAAAAGCATTGAGTTCGAG
GAAATCGCAAAAAG-GCAAGGGAATCGGCGTGCG
>chr5B_594
CCTACT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------AATTTAGGAAGAAAGGAAACGA-----------------
-----TAGCCCAAACTTGTAC--GTGTCTGCCCTAGTTTCCTTAT-ATAGGCGACAACTGATCG-------TATCATGTA
ACGAAAATTTACAGGTTGAATTATTGTACAAGTACGTACTCATGAAACTTCCTTGTACAGTAGTATGTTT---GTAATCC
TTTGGGCACCTCGATCTCAAACGGCATAAGAGCGCACGCTACCGAGTGAGTGTATATGTATATAAAAGAAAGAA---ACT
ATG----CCGACGTAGAACGTCCGTCCGCCGCTAACCCGT-CTTGCCTTGTTGCGTTGAACTGACGCTCGGTTCAGTGTT
ATTATCGTGCCGACACCGGGAGCCGTACGTGTTCGTTGGCCGCTTCGGGCACGGATGCGAGTCCTGTCAGGACTATGACG
AGCACCGCGCGCGTCGGTCACACGGTCGCCCTTGTTAT-AAGGTTCCACACCTACGCTCAACCCAGCCCATCAATCAAAC
GCAACCAACCCCGGCCG------------CCTCGCGCCCTCGA---TCGCACGCAGATCT-----------------CGG
CGCCCCGATACGCACACGCGGACGTGCTGTGTGTTACTGGAGTAAGCTAGC-AGCAATGGCGCACAACGCATCGGCGGCG
ACGACGGCGCAGAAGCGCAAGTACACCGAGGAGGAGGAGACGGCCGGCTTGTGCGCCAACGGCTGCGGCTTCTTCGGCGC
CGCCGCCACCGGCAACATGTGCTCCAAGTGCTACCGCGACCACGTTCACGCCGCCACCGCCGACACCGCGGCGGCGGGGA
GCGTCT---TCATCGACCCTGCTGGTTCGACCGCGCCGCCTCCGGCGAAGAAGGCCAGGATGATCGTCGCCGTCCCGTCC
TCTGATGGTGCGGCCGCCTCCTCCACCGCTGTGGCGGTTGACCCCGCCGTGACGCCCATGAAGCAGCCGGCGGTGGCGGC
GAACCGGTGCGCGGCGTGCCGCAAGAAGGTTGGGCTGCTGGGGTTCCGATGCCGCTGCGAGGGCACCTTCTGCAGCGTGC
ACCGCTACTCGGAGAAGCACGACTGTGGATTCGACTACAAGGCCGCCGGCCAGGAGCAGATCGCCAAGCACAACCCGCTC
GTGGTTGCGGACAAGATGACCGGAAGGATTTGAAGCCCACAAGAAACCACCAGATCAACGGCGAACCGATCAAGCAGT-A
G-TCATGGCGTCCTCGAGGATAGA-ATCGATCAATCTTCTTTATATTTGCTACTAGGTCTTGGAACGTGTAAATATTAGT
TTAGGCTTACAGAGACATCGGAATTCTGTAAATATTAGTTTAGAGTTTAGATTTCGA----AGATACATGAATTTGTACC
GCGAGTCTTGAAACATTTGTTCACCTCGATTTTATAATTTAAAGCAAATCACCACGTCTATACAACAAGTTTCGGTGTAA
CATAAAAAAGTAATAGGTCTGCTGTGTAATACTCTC-TTAAAGTCGTACTAAAGTTAATACATTTATTTTGAGACAAAGG
AAATATCACAAATATGCCCAAAAGGGAAAAAGAAAG-TTGATACAATAGATACGCGGAGCCAACGAAGCGCCGGCTAAAG
CCTTGTACAATGTATAAGGTGCTTAGGGGGAGATGCTTTATAAAATAAACCATATTTTTCTC--AAACATCAATGCTTAT
CTTTACAAGAGAGGATGGGTGCTTCATTAAGCGTTTGTCCTCTATAAATAAGCACCGGTGCTTAAGAAAATATGGTTTAT
ATTTTTCTAAGCACCTTGCACTGTC-------TAATGCCTAAAAGGATATG-----------CAATATGAAACCCACATT
GATGATCCCGCCAAGTCACTCGATGTTCCGCTGTCTAGTAAGCGGGTGCCAGTGCACATCCCAAAAAGACTCGCTCAATC
ACCATTC-GTTACGCGTTGTTCATAGGGTGTAGACTATCACTGCGAACACTCACTAGGAGAGACGTCTCCTCCTACCGGT
ATGGTTGGACTGGGCTTATACAAACTCT-----------------CCATTCAGGTCCAGAGCCTTATGGACAAAGCTCCA
ACAAAAGTGGGCAGCGGACCTGAGAAGACAATGTGGGTCCAGGACTCAGACACTACACACGGGAAAATACCATCGCCTGG
CCCATGCCGCTTGGCGACCTCCATCCCTGAGGGGACGTGACCGCGCAACAACTGCCAAACAAAGATCTTAATCTCCAGCG
AAAGCGGCGCTTTCCACAAAGGAGTGGCCCATGCCAGCATAGGCGCGCGACATAGGCCGCCAACAACCCAACAAGGCCAG
GTGCCCAAAGACAGTATCCAGAGAGTTTGTCATAACAGGAGGGGGAGCCTCACTCAATTCAGCCCAAGCAAGGGTCTCCT
TAGACCCAAATGTTTGTCAGAACGAGATGTTCCAATTCCCATTATGGGCAATTCAGGGAACCAAAAACATTGAGTTCGAG
GAAATCACAAAAAA-GCAAG--------------
>chr5A_965
ATTATA--------------------------------------------------------------------------
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----------------------------------------AGGTTCCACACCCACGCGCAACCCAGCCCATCAATCGAAC
GCAACCAAACAGCCCCGCCCCCTCCGTAACCTCGACCGCTCCA---TCGCACGAAGATCACGCACGTCTCGGGCTCCCGG
CGCCCCAATACAGACCCGCGGAAGTGTTCGCGG-----------ACTACGTACGTAGCGGCGATGGACGCAT------CG
GCGACGGCGCAGAACCGCAAGTGCCCCGACAAGGAGGAGACTGCCGGAATGTGCGCCAACGGCTGCGGCTTCTTCGGCGC
CGCCGCCACCGGCAACATGTGCTCCAAGTGCTACCTGGATCACGTCATCATCGGCACCGCTAACACCGTGGCCGCCTCGA
CCGG---------------------------------GCCTCCGGAGAAGAAGGCCAAGATTATCGTCGCCGTCCCGTCC
TCCGATGGTGCGGCCGCTTCCTCCACCGCAGCCGCACTTGACTCCTCCGTGACGTCCGTGAAGCAGCCGCCGGTGGCGGC
CAACTGGTGCGCGACGTGCCGCAAGAAAGCGGGCCTGCTGGGGTTCCGATGCCGCTGCGAGGGCACCTGCTGCAGTGTGC
ACCGCTACTCGGAGTAGCACGACTGTGTATTCGACTACAAGACCGCCGGCCAGGAGCAGATCGCCAAGCACAACCCAGTC
ATGGTTGCGGACAAGATTTCCCGAAGTATCTGACACCCACAAAAAACCACCAGATCAACGGCGAACCGATCAAGCAGTTT
G-T-----------------------------------------------------------------------------
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>chr5B_966
-TTATA--------------------------------------------------------------------------
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----------------------------------------AGGTTCCACACCCACGCGCAACCCAGCCCATCAATCAAAC
GCAACCAAACAGCCCCGCCCCCTCCGTAACCTCGAGCGCTCCATTGTCGCACGAAGATCACGCGCGTCTCGGGCTCCCGG
CGCCCCAAT--AGACCCGCGGAAGTGTTCGCGG-----------ACTACGTACGTGGCGGCGATGGACGCAT------CG
ACGACGGCGCAGAGGCGCAAGTGCCCTGACAAGGAGGAGACAGCCGGCTTGTGCGCCAACGGCTGCGGCTTCTTCGGCGC
CGCCGCCACCGGCAACATGTGCTCCAAGTGCTACCTGGAGCACGTCATCATCGGCACCGCTAACACCGTGGCCGCCTCGA
CCGG---------------------------------GCCTCCGGAGAAGAAGGCCAAGATTATCGTCGCCGTCCCGTCC
TCCGATGGTGCGGCCGCTTCCTCCACCGCAGCCGCACTTGACTCCTCCGTGACGTCCGTGAAGCAGCCGCCGGTGGCGGC
GAACCGGTGCGCGACGTGCAGCAAGAAGGTGGGCCTGCTGGGGTTCCGATGCCGCTGCGAGGGCACCTTCTGCAGCGTGC
ACCGCTACTCGGAGAAGCACGACTGTGCATTCGACTACAAGACCACCGGCCAGGAGCAGATCGCCAAGCACAACCCTGTC
GTGGTTGCGGACAAGATTTCCCGAAGGATCTGACGCCCACAAAAAACCACTAGATCAACGGCGAACCGATCAAGCAGTTT
G-T-----------------------------------------------------------------------------
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>chr5A_1122
--------------------------------------------------------------------------------
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-CGACGACGCAGAAGCGCAAGTGCCCCGACAAGGAGGAGACGGCCGGCATGTGCGCCAACGGCTGCGGCTTCTTCGGCGC
CGCCGCCACGGGCAACATGTGCTCCAAGTGCTACCTGGACCACGTCGTCATCGGCACCGCTAACACCGTGGCCGCCTCGA
CGGG---------------------------------GCCTCCGGCGAAGAAGGCCAAGATGATCGTCGCCGTCCCGTCC
TCTGATGGTGCGGCCGCCTCCTCCACCGCCGCCGCGGCTGACTCCTCCGCGAGCTCCGTGAAGCAGCCGCCGGTGGCGGC
GAACCGGTGCGCGACGTGCCGCAAGAAGGTGGGGCTGCTGGGGTTCCGATGCCGTTGCGAGGGCACCTTCTGCAGCGTGC
ACCGCTACTCGGAGAAGCACGACTGTGGATTCGACTACAAGACCGCCGGCCAGGAGCAGATCGCCAAGCACAATCCGGTC
GTGGTTGCGGACAAGATCACCCGAAGGATCTGACGCCAGCAACAAACCAGCAGATCAACGGCCAACCGATAAAGCAGT-A
G-TCATGGCGGCCTCGAGGATATAGATCGATCGATCTTCTTTGTATTT---------TCTTGGAACGTGTAAATCTTAGT
TTGGACTTCGGAGAT-----------------------------------------------------------------
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>chr5D_1122
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-CGACGACGCAGAAGCGCAAGTGCCCCGACAAGGAGGAGACGGCCGGCATGTGCGCCAACGGCTGCGGCTTCTTCGGCGC
CGCAGCCACCGGCAACATGTGCTCCAAGTGCTACCTGGACCACGTCACCATCGGCACCGCTAACACCGTGGCCACCTCGA
CCGG---------------------------------GCCTCCGGTGAAGAAGGCCAGGATGATCGTCGCCGTCCCGTCC
TCTGATGGTGCGGCCGCCTCCTCCACCGCCGCCGCAGTTGACTCCTCCGTGACGTCCGTGAAGCAGCCGGCCGTGGCGGC
GAACCGGTGCGCGACGTGCCGCAAGAAGGTGGGGCTGCTGGGGTTCCGATGCCGCTGCGAGGGCACCTTCTGCAGTGTCC
ACCGCTACTCGGAGAAGCACGACTGCGGATTCGACTACAAGACCGCCGGCCAGGAGCAAATCGCCAAGCACAACCCAGTC
GTGGTTGCGGACAAGATCACCCGAAGGATCTGAAGCCCACAAGAAACCACCAGATCAACGGCGAACCGATCAAGCAGTTG
GTTCGTGGCGTCCTCGAGGATATA-TACGATCGATCTT------------------------------------------
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>chr5D_1122
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-CGACGACGCAGAAGCGGAAGTGCCCCGACAAGGAGGAGACGGCCGGCATGTGCGCCAACGGCTGCGGCTTCTTCGGCGC
CGCCGCCACCGGCAACATGTGCTCCAAGTGCTACCTGGACCACGTCA---CCCACACCGCCAACACCATGGCCACCTCGA
CCGG---------------------------------GCCTCCGGTGAAGAAGGCCAGGATGATCGTCGCCGTCCCGTCC
TCTGATGGTGCGGCCGCCTCCTCCGCCGCCGCCGCAGTTGACTCCTCCGTGACGTCCGTGAAGCAGCCGCCGGTGTCGGC
GTACCGGTGCGCGACGTGCCGCAAGAAGGTGGGCCTGCTGGGGTTCCGATGCCGCTGCGAGGGCACCTTCTGCAGTGTCC
ACCGCTACTCGGAGAAGCACGACTGCGGATTCGACTACAAGACCGCCGGCCAGGAGCAGATCGCCAAGCACAACCCAGTC
GTGGTTGCGGACAAGATTTCCCGAAGGATCTGACGCCCGCAAGAAACCACCAGATCAACGGCGAACCGATCAAGCAGTTG
GTTCGTGGCGTCCTCGAGGATATA-TACGATCGATCTT------------------------------------------
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----------------------------------
>SNPs
-S-----S--------------S---------------------S-------S-------S-------S-----------
-----S-S-S-S--------------------S--S--------SSS---------------------S--------S--
------------------------------S-S--S-------SS------------S-------S---S----S--S--
----S------------S---------S----S---------------S---------S-S------------S------
--------S------S---S--------------------S------S------S--S------S-----S-S-------
-S----------S-------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S----S---
---------------------S----S--S---------------------------------------S-S--------
------------------SSSSS---S-----------SSS----S-S--------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
---SSSS----------S-----S----------------------------------S---------------------
----------------------------------S-----------------S-------------S-----------SS
--------------------------------------------------------------------------------
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------S------------------S--------------S---------------------------------------
------------------S---------------------------------------S----------------S----
-------------------S----------------------------S-------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S-----------------SSS-------S----------
----------------------------------S----------------------S----------------------
--------------------------------------------------------------------------------
-----------------------------------S-----S-----------------------------S---SS---
--------S---------S-----------------------------S-------------------------S-----
--S---------------S-----------S-----S--S----------------------S-S----S--S-------
--------------S-SS--SSS---------------------S--------S-----S--SS---S---S--------
-------SS-------------------------S--S-S---------------S----S-------------------
---------------------------------------------SSSSSSSSSSSSSSSSS----------------S-
--------------------------------------------S------------S------------S-S-------
-S-----S---------------------S----------------------S--S-S----------------------
-S------------S---S-S-----S----S------------------S-----S-----------------S----S
------------S------S---------------------SS-----------------S-S---S-------------
--------------S------------S----------S--S-------------------------------------S
--------S-----------------------------------S------------------SSS------S----S--
-----------S-------S------------S----------------------------------------SS---S-
-------------------------------S-----SS--------------S--------------------------
--------------S----------SS-------
>forward_898
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------------------------------------------------------------------------------CT
ATGCCGACCGACGTAGAC--------------------------------------------------------------
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>reverse_2715
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--------------------------------------------------------------------------ACTCCT
AGAAAACGGGCTGC------------------------------------------------------------------
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----------------------------------
