>input_sequence_64947
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--------------------------------------------------------------------------GCATCC
CTCATCACGTGAAGTTCACGGACAAACATGTCTCCGGTGAAGGTGTTCGGGCACCCGATGTTGACAAACGTCGCACGGGT
GCTGCTCTTCCTGGAGGAGGTCGGCGCCGAGTACGAGCTCGTGCCCGTCGACTTCGTCGCCGGCGAGCACAAGAGGCCCC
AACACGTCCAGCTAAACGTAAGCAGACGACAATTCGTCGATCGGTCACCGTATAGTA-TCAGGTGATGATTTCTAACAGA
GATGCTGCGTGTTTTTTTTTTCTTGCAGCCGTTTGCGAAGATGCCTGGGTTCCAAGATGGCGATCTCGTCCTGTTCGGTG
AGCCCTCCATCCATCCATCCGTACACACGACACGAATCATTCCTGTCTAGGAGTATATATCATGTTAAAAATCCATTGCA
TTGGTTTCTCTAATCTAATCTAACAAATGGA----TGAGTGATT----GCAGAGTCGCGCGCCATCGCCAAGTACATCCT
CCGCAAGTACGGGGGGACAGCCGGCCTCGACCTCCTCGGAGAAAACAGCGGAATCGAAGAATTAGCAATGGTGGACATGT
GGACGGAGGTGGAGGCCCAGCAGTACTACCCGGCCATCTCGCCCGTGGTGTTCGAGTGCATCATCATTCCCTTCATCATT
CCTGGCGGTGGCGCGGCGCCGAACCAGACCGTCGTCGACGAGAGCCTGGAGCGGCTGAGGGGTGTGCTGGGGATCTATGA
GGCCCGGCTGGAGAAGAGCAGGTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCTGAACCACATCCCGTTCACCTTCT
ACTTCATGACCACCCCGTACGCCAAGGTGTTTGATGACTACCCCAAGGTGAAGGCCTGGTGGGAGATGCTCATGGAGAGG
CCCGCGGTGCAGAGGGTCTGCAAGCATATGCCTACGGAGTTTAAGCTAGGTGCACAGTACTAG-----------------
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>chr3D_1_TraesCS3D01G133100
GTGTAGCCGATCGTGGGTACGTGGTGCTGGCACCGACAGATATGCTGACGACAGACCAGATAGCACGGGCCCAGGTGTCC
ATGGATCTTGGTCACCGTGGTGTGCATAGATTACACTGCCA---------------------------------------
-------------------TACGAGGAACTACATGCATAAAAATAGTGCATGCGTGAGAGTATACCTCAACGA-------
-TGAGATGGTGAAACCTCTGAAAGAAAATAAAGGATGGGATGATGAACCTCAAGTGTCGTCGTCTCCGGTCAGGCAAGAC
CGCAGGGGTTGCCATATATTTCCTTCAGCCGTCGGGCAAGACCGCAGGGGTTGCCATATATCTTGTTGTCGTCGTATATC
GTAGCCGGTCATAGCCGCCGGCGGCGATGTTACACGACGATGCACTGTGACCACATGAGG-----AGCAGATGAGACCTT
GTATA-TTTCCTTCAGCTGTTGTCGTCGTGGTTGATGCTGGACCAGATGCTGCTGCCGCCTCTCCTC-GCTTTCGCCGTG
TCCCCGCCAGTCCGCCACGGCTGCAGCTGCCCGGCATGTGCCCAAGGATGGGATGGCAAGAAAAGTCAGGCTGCCTCTGT
TGTCATCCCTGCCATCAGCGATCCACAAACCACAATTTCTAGAACAAGGAATATGCCTAGG-------------------
AGTATGCATGTGGTTATCCCTAAAAATCTGGAACAACTTTTCAAAGTGCTCGTGATCTCTCCC-----------------
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-----------------------GTGGGATAATTTAAGAGGGAGTATGCG------------------------------
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-----------------ATAAACTAACAAAGATGATTAC-----TTAC-----CCGGTTTA-------------------
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---------------------AATGATT---TAAGAGCTC-----ATTTGGCACTCATCATTTCAT-----TTTTTTTGG
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-----------------------------------------------------------------------CAGAAATGA
AATAAAGCAGATCTAGGCACTAGCTAAAAAGTCGAGGT--------------------------AGCCTTGTTATTTCCT
TAGGCCACGCGGGCCGGGTGTGGTGCT-----------------------------------------------------
-------------------------------------------------------------------CCCTGCTCT----
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-TGTATAAATAGAGATCAACATCCAAGGCCTCCTCCCACACACGCA------------CACGCTACAGAG----------
-------------------------CAGAGCAGAGTCTTGCTCCAGTATCTGCCCTCTCCTGTAG---TGTAGAGCATCC
CTCATCACGTGAAGTTCACGGACAAACATGTCTCCGGTGAAGGTGTTCGGGCACCCGATGTTGACAAACGTCGCACGGGT
GCTGCTCTTCCTGGAGGAGGTCGGCGCCGAGTACGAGCTCGTGCCCGTCGACTTCGTCGCCGGCGAGCACAAGAGGCCCC
AACACGTCCAGCTAAACGTAAGCAGACGACAATTCGTCGATCGGTCACCGTATAGTA-TCAGGTGATGATTTCTAACAGA
GATGCTGCGTGTTTTTTTTTTCTTGCAGCCGTTTGCGAAGATGCCTGGGTTCCAAGATGGCGATCTCGTCCTGTTCGGTG
AGCCCTCCATCCATCCATCCGTACACACGACACGAATCATTCCTGTCTAGGAGTATATATCATGTTAAAAATCCATTGCA
TTGGTTTCTCTAATCTAATCTAACAAATGGA----TGAGTGATT----GCAGAGTCGCGCGCCATCGCCAAGTACATCCT
CCGCAAGTACGGGGGGACAGCCGGCCTCGACCTCCTCGGAGAAAACAGCGGAATCGAAGAATTAGCAATGGTGGACATGT
GGACGGAGGTGGAGGCCCAGCAGTACTACCCGGCCATCTCGCCCGTGGTGTTCGAGTGCATCATCATTCCCTTCATCATT
CCTGGCGGTGGCGCGGCGCCGAACCAGACCGTCGTCGACGAGAGCCTGGAGCGGCTGAGGGGTGTGCTGGGGATCTATGA
GGCCCGGCTGGAGAAGAGCAGGTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCTGAACCACATCCCGTTCACCTTCT
ACTTCATGACCACCCCGTACGCCAAGGTGTTTGATGACTACCCCAAGGTGAAGGCCTGGTGGGAGATGCTCATGGAGAGG
CCCGCGGTGCAGAGGGTCTGCAAGCATATGCCTACGGAGTTTAAGCTAGGTGCACAGTACTAGATGTTT-----CTCCGC
GCGAGTGTGTG----------CCGTGCCG-----TGCCGGTGATGATTCCATTCAAGAGAAGAGAC----CTCCCGTGGG
TGGGTGATCATCTGCCCGTCTAGTTCGTTCGT----GTA---TACGCTTTCAGTTTCAGCAGCA--CGAGGAGTCCGCTT
GCGCTTCTGTTCGTGCG---------------------------------------------------------------
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-----------------------AGCCTGGATTCCTTGCTTTAAGTTGTGCACTAGTACTCCCTCCGTTCCATAATATAG
TGTCTATAGATTTTTGCAAAAGTCAAACATTACAAACTTTGACCATATTTATAG--------------------------
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------------------------------------------AAAAAAGTAGGTACATCTAGAATAGCAAATGCACATCA
TTGAATACATCATGAGTTATATTTTCAAAATGTACATGTTTGATATTGTAGATGTAGACGGTTTTCTCATACAC------
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----------------------------------------------------TTGATCAAAGTTAGCAAAATTTGACTTG
CACAAAAATCTATAGGCATGGAGGG-------------------------------------------------------
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--AG-------TAG----TAAATAAACAACGGACTGGTCAATGCTGCTAATCCATAC-----GTCGTATATA-----GTA
CACAACTAAAGATCAGAATGGATCCAAAGCAAACATATATATATT-ACTACATCTTGGATACGTGTGCATGCATGGCTCT
CTTTGGCCGTCAAATCGTACCACCTT------------------------------TCAATCTTGGCGTCTCTCCAGATT
TCGTTTTCCAAACCGCCGACTTTGCAGTTTATTTATTTACTAGCAAAAATGCCTGTGCGTTGCATCGGAAGAAAAAAAAA
TCTTTCATGTTTGGTTTGTGGGTATGTGAGTTGCCAAGGAAAGACACTACGTATGTGATGCTATCAAGATTTGTCTTAAT
CAAAAACTTATTTATCCATTTGCTAAAGTATCATACATGCACAAGACATGCATTTGTCTATATAAAGAGATCCTTAGTTG
AATGCCCATGCGTTGCTATGCAAAAAAAAAAATCAATTGATCGTGACTTAACTCTCTTGTCACCCAAGTAACATAAATCT
ACTTTAGTCAAGACAACACGGGACAAAAGTCTCATATGAAGAAATAATTATAGATGA
>chr3B_1
GTGTAGCCGATCGTGGGTACGTGGTGCTGGCACCGATAGGTATGCTGACGACAGACCAGCTAGCACGGGCCCAGGTGTCC
ATGGATCTTGGTCACCGTGGTGTGCTTAGATTACACTGCC-------ATAGTCAGTGGGAGATAAAAAAAAATTTAATGG
ACAATGGAAAATAAGTTAGTACGAGGAACTACATGCATAAAAGTAATGCATGCGTGAGAGTATACCTCAACGA-------
-TGAGACCC--------CTGAAAGAAAATAAAGGATGGGATGATGAACCTCAAGTGTCGTCGTCTCCGGTCAGTCAAGAC
TGCAGGGGTTGCCATATGAAGTC------------------------------------ATCTTGTTGTCGTCGTATATC
GTAGCCGGTCATAGCCGCCGGCGGCGATGTTACACGAAGATGCACTGTGACCACATGAGG-----AGCAGATGAGACCTG
CTATATTTTCCTTCAGCTATTGTCGTCGTGGTTGATGCTGGACCAGATGCTGCTGCCGCCTCTCCTC-GCTTTCGCCGTG
TCCC-GCCAGTCCACCACGGCTGCAGCCGCGCGGCATGTACCCAAGGATGGGATGGCAAGAAAAGTCAGGCTGCCTTTGT
TGTCATCTCTGCCATCAGCGAC-------CCACAATTTCTAGAACAAGGAATATGCCA-------------TGTAATAAC
AGTATACATGTGCTTATCCCTAAAAATCCGGAACAACTTTCCAAAGTGCTCGTGATCTCTCCC-----------------
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-----------------------GTGGGATAATTTAAGAGGGAGTATGCG------------------------------
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-----------------ATAAACTAACAAAGATGATTACAGTACTTGC-----CCGGTTTA-------------------
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---------------------AATGATT---CAAGAGCTCATTTAATTTGGCACTCATCATTTCATATAT-CTTTTTTGG
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-----------------------------------------------------------------------TAGAAATGA
AATAAAGCAGATCTAGACACTAGCTAAAAAGTCGATGT--------------------------AGCCTTGTTATTTCCT
TGGGCCACGCGGGCCGGGTGTGGTGCT-----------------------------------------------------
-------------------------------------------------------------------CCCTGCTGT----
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GTGTATAAATGGAGATCAACATCCAAGGCCTCCTCCCACACA--CA----------CACACGCTACAGAG----------
-------------------------CAGAGCAGAGTCTTGCTCCAGTATCTGCCCTCTCCTGCCTGCCTGTAGAGCATC-
--CATCACGTGAAGTTCACGGACAAACATGTCTCCGGTGAAGGTGTTCGGGCACCCGATGTTGACAAACGTCGCACGGGT
GCTGCTCTTCCTGGAGGAGGTCGGCGCCGAGTACGAGCTCGTGCCCATGGACTTCGTCGCCGGCGAGCACAAGAGGCCCC
AACACGTCCAGCTAAACGTAAGCAGACGACAATTCGTCGATCGGTCACCGTATCAGGTTCAGGTGATGATTTCTGACAGA
GATGCTACGTGTTTTTC-TTCCTTGCAGCCGTTTGCGAAGATGCCTGGGTTCCAAGATGGCGATCTCGTCCTGTTCGGTG
AGCCGTCTAACA---CATCAGTGCACACGACACGAATCATTCCTGTCTAGGAGTATATATCATGTTAAAAATCCATTGG-
TTGGTTTCTCTAATCTAA-----CAAATCGATGAGTGAGTGAGT----GCAGAGTCGCGCGCCATCGCCAAGTACATCCT
CCGCAAGTACGGGGGGACAGCCGGCCTGGACCTCCTCGGAGAAAACAGCGGAATCGAAGAATTAGCAATGGTGGACGTGT
GGACGGAGGTGGAGGCCCAGCAGTACTACCCGGCCATCTCGCCCGTGGTGTTCGAGTGCATCATCATCCCCTTCATCATC
CCTGGCGGTGGCGCGGCGCCGAACCAGACCGTCGTGGACGAGAGCCTGGAGCGGCTGAGGGGTGTGCTGGGGATCTACGA
AGCCCGGCTGGAGAAGAGCAGGTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCTGAACCACATCCCGTTCACCTTCT
ACTTCATGACCACCCCGTACGCCAAGGTGTTTGATGACTACCCCAAGGTGAAGGCCTGGTGGGAGATGCTCATGGCGAGG
CCAGCGGTGCAGAGGGTCTGCAAGCATATGCCTACCGAGTTTAAGCTAGGTGCGCAGTACTAGGTGTTTATGCACTCCGC
GCGGGTGTGTGCCGTGCCGTGCCGTGCCG-----TGCCGGTGATGATTCCGTTCAAGAGAAGAGACCTCCCTCCCGTGGG
TGGGTGATCATCTGCCCGTCTACTTC----CA----GTAGTATACGCTTTTAGTTTCAGCAGCA--CGAGGAGTCCGCTT
GCGCTTCTGTTCGTGCG---------------------------------------------------------------
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--------------------------CTGGATTCCTTGCTTTAATTTATGCACT--------------------------
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--AGTACTAGTTAG----TAAATAAACAACGGACTGGTCAATGCTGCTAATCCGTACTGTACGTCCTATATAGTA-----
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>chr4B_1
GTGTAGCCGATCGTGGGTACGTGGTGCTGGCACCGATAGATATGCGGACGACAGACCAGCTAGCACGGGCCCAGGTGTCC
ATGGATCTTGGTCACCGTGGTGTGCATAGATTACACTGCCATACGCCATAGTCAGTGGAAGATAAAAAAAA--TTAATGA
ACAATGGAAGATAAATTAGTACGAGGAACTACATGCATAAAAGTAATGCATGCGTGAGAATATACCTCAACGATGAGATG
GTGAAACCC--------CTGAAAGAAAATAAAGGATGGGATGATGAACCTCAAGTGTCGTCGTCTCCGGTCAGGCAAGAC
CGCAAGGGTTGCCATATGAAGTC------------------------------------ATCTTGTTGTCGTCGTATATC
GTAGCCGGTCATAGCCGCCGGCGGCGATGTTACACGAAGATGCACCGTGACCACATGAGG-----AGCAGATGAGACCTT
CTATATTTTCCTTCAGCTATTGTTGTCGTGGTTGATGCTGGACCAGAAGCTGCTGCCGCCTCTCCTCAGCTTTCGCCGTG
TCCCCGCCAGTCCGCCACGGCTGCAGCCGCCCGGCATGTATCCAAGGATGGGATGGCAAGAAAAGTCAGGCTGCCTTTGT
TGTCATCGCTGCCATCAGCGAT-------CCACAATTTCTAGAACAAGGAATATGTCTAGGAGTATAGACTTGTAATAAC
AGTATACATGTGCTTATCCCTAAAAATCTGGAACATCTTTTCAAAGTGCTCGTGATCTCTCCC-----------------
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-----------------------GTTGGATAATTTAAGAGGGAGTATGCG------------------------------
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-----------------ATAAACTAACAAAGATGATTACAGTACTTAC-----CCGGTTTA-------------------
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---------------------AATGATTTATTAAGAGCTC-----ATTTGGCAGTCATTATTTCATATATATTTTTTTGG
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-----------------------------------------------------------------------CAGAAATGA
AATAAAGCAGATCTAGACACTAGCTAAAAAGTCGATGT--------------------------AGCCTTGTTATTTCCT
TGGGCCACGCGGG-----TGTGGTGCTCCTTGCTCTGTGTTTTTTCCCGATAAAAGAGAGCTTTTCTCTCCGATTTCTAG
TAATTCTTTTGAAAGAAGATTTCCACTAATAGAAATCACCAGGTCTTACAAGATAAGCAAAAGGAGACCCTGCTCT----
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GTGTATAAATGGAGATCAACATCCAAGGCCTCCTCCCACACA--CACACACACACACACACGCTACAGAG----------
-------------------------CAGAGCAGAGTCTTGCTCCAGTATCTGCCCTCT----CCTGCCTGTAGAGCATC-
--CATAACGTGAAGTTCACGGACAAACATGTCTCCGGTGAAGGTGTTCGGGCACCCGATGTTGACAAACGTCGCACGGGT
GCTGCTCTTCCTGGAGGAGGTGGGCGCCGAGTACGAGCTCGTGCCCGTCGACTTCGTCGCCGGCGAGCACAAGAGGCCCC
AACACGTCCAGCTAAACGTAAGCAGACGGCAATTCGTCGATGGGTCACCGTATCAGGTTCAGGTGATGATTTCTGACAGA
GATGCTA--------------CTTGCAGCCGTTTGCGAAGATGCCTGGGTTCCAAGATGGCGATCTCGTCCTGTTCGGTG
AGCCTTCTAACA---CATCAGTAC-----ACACGAATCATTCCTGTCTAGGAGT----ATCATGTTAAAAATCCATTGG-
TTGGTTTCTCTAATCTAA-----CAAATCGA----TGAGTGAGT----GCAGAGTCGCGCGCCATCGCGAAGTACATCCT
CCACAAGTACGGGGGGACAGCCGGCCTGGACCTCCTCGGAGAAAACAGCGGAATCGAAGAATTAGCAATGGTGGACGTGT
GGACGGAGGTGGAGGCCCAGCAGTACTACCCGGCCATCTCGCCCGTGGTGTTCGAGTGCATCATCATTCCCTTCATCATC
CCTGGCGGTGGCGCGGCGCCGAACCAGACCGTCGTGGACGAGAGCCTGGAGCGGCTGAGGGGTGTGCTGGGGATCTACGA
GGCCCGGCTGGAGAAGAGCAGGTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCTGAACCACATTCCATTCACCTTCT
ACTTCATGACCACCCCGTACGCCAAGGTGTTTGATGAGTACCCCAAGGTGAAGGCCTGGTGGGAGATGCTCATGGCGAGA
CCGGCGGTGCAGAGGGTCTGCAAGCATATGCCTACCGAGTTTAAGCTACGTGCGCAGTACTAGATGTTTATGTACTCCGC
GCGGGTGTGTGCCGTG----------CCG-----TGCTGGTGATGATCCCATTCAAGAGAAGAGACCTCCCTCCCGTGGG
TGGGTGATCATCTGCCCGTCTACTAC----CA----GTA---TACGCTTTCAGTTTCAGCAGCA--CGAGGAGTCCGCTT
GCGCTTCTGTTCGTGCG---------------------------------------------------------------
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-----------------------AGCCTGGATTCCTTGCTTTAATTTGTGCACT--------------------------
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--AGTA--------------------------------------------------------------------------
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>chr4B_1
GTGTAGCCGATCGTGGGTACGTGGTGCTGGCACCGATAGATATGCGGACGACAGACCAGCTAGCACGGGCCCAGGTGTCC
ATGGATCTTGGTCACCGTGGTGTGCATAGATTACACTGCCATACGCCATAGTCAGTGGAAGATAAAT-AAA--TTAATGA
ACAATGGAAGATAAATTAGTACGAGGAACTACATGCATAAAAGTAATGCATGCGTGAGAATATACCTCAACGATGAGATG
GTGAAACCC--------CTGAAAGAAAATAAAGGATGGGATGATGAACCTCAAGTGTCGTCGTCTCCGGTCAGGCAAGAC
CGCATGGGTTGCCATATGAAGTC------------------------------------ATCTTGTTGTCGTCGTATATC
GTAGCCGGTCATAGCCGCCGGCGGCGATGTTACACGAAGATGCACCGTGACCACATGAGG-----AGCAGATGAGACCTT
CTATATTTTCCTTCAGCTATTGTCGTCGTGGTTGATGCTGGACCAGAAGCTGCTGCCGCCTCTCCTC-GCTTTCGCTGTG
TCCCCGCCAGTCCGCCACGGCTGCAGCCGCCCGGCATGTATCCAAGGATGGGATGGCAAGAAAAGTCAGGCTGCCTTTGT
TGTCATCGCTGCCATCAGCGAT-------CCACAATTTCTAGAACAAGGAATATGCCTAGGAGTCTAGATTTGTAATAAC
AGTATACATGTGCTTATCCCTAAAAATCCGGAACAACTTTTCAAAGTGCTCGTGATCTCTCCC-----------------
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-----------------------GTGGGATAATTTAAGAGGGAGTATGCG------------------------------
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-----------------ATAAACTAACAAAGATGATTACAGTACTTAC-----CCGGTTTA-------------------
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---------------------AATGATTTATTAAGAGCTC-----ATTTGGCAGTCATCATTT--CATAT-ATTTTTTGG
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-----------------------------------------------------------------------CAAAAATGA
AATAAAGCAGATCTAGACACTACCTAAAAAGTCC---TACAATATTCAGAGCGGTCAGTCCTGAAGCCTTGTTATTTCCT
TGGGCCACGCGGG-----TGTGGTGCTCCTTGCTCTGTGTTTTTTCCCGATAAAAGAGAGCTTTTCTCTCCGATTTCTAG
TAATTCTTTTGAAAGAAGATTTCCACTAATAGAAATCACCAGGTCTTACAAGATAAGCAAAAGGAGACCCTGCTCT----
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GTGTATAAATGGAGATCAACATCCAAGGCCTCCCCCACCCCCCCC---CACACACACACACGCTACAGAG----------
-------------------------CAGAGCAGAGTCTTGCTCCAGTATCTGCCCTCTCCTGCCTA----TAGAGCATC-
--CATAACGTGAAGTTCACGGACAAACATGTCTCCGGTGAAGGTGTTCGGGCACCCGATGTTGACAAACGTCGCACGGGT
GCTGCTCTTCCTGGAGGAGGTGGGCGCCGAGTACGAGCTCGTGCCCGTCGACTTCGTCGCCGGCGAGCACAAGAGGCCCC
AACACGTCCAGCTAAACGTAAGCAGACGGCAATTCGTCGATGGGTCACCGTATCAGGTTCAGGTGATGATTTCTGACAGA
GATGCTA--------------CTTGCAGCCGTTTGCGAAGATGCCTGGGTTCCAAGATGGCGAATCATTACACATCAGTA
C--------ACA---CATCAGTAC-----ACACGAATCATTCCTGTCTAGGAGT----ATCATGTTAAAAATCCATTGG-
TTGGTTTCTCTAATCTAA-----CAAATCGA----TGAGTGAGT----GCAGAGTCGCGCGCCATCGCGAAGTACATCCT
CCGCAAGTACGGGGGGACAGCCGGCCTGGACCTCCTCGGAGAAAACAGCGGAATCGAAGAATTAGCAATGGTGGACGTGT
GGACGGAGGTGGAGGCCCAGCAGTACTACCCGGCCATCTCGCCCGTGGTGTTCGAGTGCATCATCATTCCCTTCATCATC
CCTGGCGGTGGCGCGGCGCCGAACCAGACCGTCGTGGACGAGAGCCTGGAGCGGCTGAGGGGTGTGCTGGGGATCTACGA
GGCCCGGCTGGAGAAGAGCAGGTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCTGAACCACATCCCATTCACCTTCT
ACTTCATGACCACTCCGTACGCCAAGGTGTTTGATGAGTACCCTAAGGTGAAGGCCTGGTGGGAGATGCTCATGGCGAGA
CCGGCGGTGCAGAGGGTCTGCAAGCATATGCCTACCGAGTTTAAGCTACGTGCGC-GTACTAGATGTTTATGCACTCCGC
GCGGGTGTGTGCCGTG----------CCG-----TGCTGGTGATGATCCCACTCAAGAGAAGAGACCTCCCTCCCGCGGG
TGGGTGATCATCTGCCCGTCTACTTC----CA----GTA---TACCCTTTCAGTTTCAGCAGCA--CGAGGAGTCCGCTT
GCGCTTCTGCTCGTGCG---------------------------------------------------------------
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-----------------------AGCCCGGATTCCTTGCTTTAATTTGTGCACT--------------------------
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--AG-------TAG----TAAATAAACAACGGACTGGTCAATGCTGCTAATCCGTAC-----GTCCTATATAGTA--GTA
CCCCACTAGAGATCAGAATGGATCCAAAGCAAATATATATATATACACTACATCTTGGATACGTGTGTGTGCATGGCTCT
CT--GGCCGTGAAATCCTAGGAAATACGCCAAACCACCTTTCAATCTGCGCATCCATCAATCTTGGCGTCTCTCCAGATT
TCGTTTTCCAAACCGCCGACTTAGCAGTTTATTTATTTATTACAA-----------------------------------
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>chr3A_141
A-------------------------------------------------------------------------------
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--------------------------------------AAAAGTAATGCATGCGTGAGAGTATACCTCCACGATGAGATG
GTGAAACCC--------CTGAAAGAAAATAAAGGATGGGATGATGAACCTCAAGTGTCGTCGTCTCCTGTCAGGCAAGAC
CGCAGGGGTTGCCACATGAAGTC------------------------------------ATCTTGTTGTCGTCGTATATC
GTAGCCGGTCATAGCCGCCGGCGGCGATGTTACACGGAGATGCACTGTGACCACATGAGGAGCACAGCAGATGAGACCTT
CTATATTTTCCTTCAGCTATTGCCGTCGTGGTTGATGCTGGACCAGATGCTGCTGCCACCTCTCCTC-GCTTTCGCCGTG
TCCCCGCCAGTCCGCCACGCCGCAGCCCGCCCGGCATGTACCCAAGGATGGGATGGCAAGAAAAGTCAGGCTGCCTTTGT
TGTCCTCGCTGCCGTCAGCGAT-------CCACAATTTCTAGAACAGGAAATATACGCAGGAGTATAGACTTGTAATAAC
AGTACACATGTGCTTATCCCCAAAAATCCGGAACAACTTTTCAAAGTGCTCGTGATCTCTCGTTGAAACCGACGGACTTT
TTGCATGAGGGAAATTGAACATGCAAATGAGGTGATGGGGAATCTCAAGATGATATGCCGGCTCAGTCTTTTGGAGATGC
TTATAGGGGTAGGATATGCGTGTGTGCGTTCATAGGAGTGAGTGTATGCGCGTGTATATGAGCGCTTGTGTCTGTACTGA
TGTTAAAAAAAATAAGGTGATGGGGCCGACCGTAGATAAGGGGCGACGTCTGACGACTACATATTAAAATTTTCAATTAT
GGACATCATACTTGACCAGCTAACTCAGGGTCATGCGTGACCATGGCCAAACTTTTCAATGAATAAAAATGGAAATCAAC
TAACGGGCCCCTCCGAGCACACTGCCTTCTTTCTAGTGTGCCTATCTGAAAGGGTCATGTGAACTGGACCAGCCACATGC
ATGTCCCATGCAGAGACGCGTGGAACGGAGCAAACAACCCAGAAAATCTGAAACGGGCATGTCAATTTGACCATGCAAAA
CGTGCAGTCAAACAAACATAAAAAAACAAAGGAACTCTCCCGTAGGATGCACTGCACACGCGGAGATAGACAAGGGCACA
TAAAGTGTCGCTCAACCGGCAGGGATGAAAAAAAAATCCGAGAAAACCAGAAAAAATTCGAACCTTGACAGGCCTAGTCT
TCTTAGTATATATATGAAGAGAATGATT---TAATACTTTGTGTTTAAGAATAGAATAAGTTATTCCATGCTCTAGCCAC
CTAAACGAACTATTTGACGAATATCTCGCTAGCTGGTGAGAGCCAGAGCCGTGGAAAGTCTCTCTTGCTAAGTTGCTATC
AAGGCCACAAGCATCAAACAGGAAAAATTAGAGCCATGGAAAGTGATGTGTCGCCTACCAATGGGCCACCTGCTAGCGAC
GTAATAGTAGCATGCAAGTTGATTTTTTATAGGACATGCAAGGCGTCGGCAAGTTGGAAAATGATTCATCGCTGGCAAGC
TTAACTCTCGGAACTTGTAGCATTCAACTGAACGAGAAGAAAAATGACAGGAGTAGCAGCCGGCGGCGGAACAAAAATGA
AATAAAGCAGGTCTAGACACTACCTAAAAAGTCCTAGTACAATATTCAGAGCGGTCAGT---------------TTTCCT
TGGGCCACGCGGGCCGGGTGTGGTGCT-----------------------------------------------------
-------------------------------------------------------------------CCCTGCTCT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
GCGTATAAATGGAGATCAACATCCAAGGCCTCCTCC--------------------------------------------
---ACACACACACGCGCGCACGCTACAGAGCAGAGTCTTGCT----------CCCTCT----CCTGCCTGTAGAGCATC-
--CATCACGTGAAGTTCACGGACAAACATGTCTCCGGTGAAGGTGTTCGGGCACCCGATGTTGACAAACGTCGCACGGGT
GCTGCTCTTCCTGGAGGAGGTCGGCGCTGAGTACGAGCTCGTGCCCCTCGACTTCGTAGCCGGCGAGCACAAGAGGCCCC
AACACGTCCAGTTAAACGTAAGCAGACGACAATTCGTCGATCGGTCACCGTATCAGGTTCAGGTGATGATTTTTGACAGA
GATGCTGCGTGTTTTTC-TTCCTTGCAGCCGTTTGCGAAGATGCCTGGGTTCCAAGATGGGGATCTCGTCCTGTTCGGTG
AGCCTTCTAACA---CATCAGTAC-----ACACGAATCATTCCTGTCTAAGAGT----ATCATGTTAAAAATCCATTGCA
TTGGTTTCTCTAATCTAA-----CAAATCGA----TGAGTGAGT----GCAGAGTCGCGCGCCATCGCCAAGTACATCCT
CCGCAAGTACGGGGGGACAGCCGGCCTGGACCTCCTCGGAGAAAACAGTGGAATCGAAGAATTAGCAATGGTGGACATGT
GGACGGAGGTGGAGGCCCAGCAGTACTACCCAGCCATCTCGCCGGTGGTGTTCGAGTGCATCATCATTCCCTTCATCATC
CCTGGCGGTGGCGCGGCGCCGAACCGGAGCGTCGTGGACGAGAGCCTGGAGCGGCTGAGGGGTGTACTGGGGATCTACGA
GGCCCGGCTGGAGAAGAGCAGCTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCTGAACCACATCCCGTTCACCTTCT
ACTTCATGACCACCCCGTACGCCAAGGTGTTTGATGAGTACCCCAAGGTGAAGGCCTGGTGGGAGATGCTCATGGCCAGG
CCGGCGGTGCAGAGGGTCTGCAAGCATATGCCTACCAAGTTTAAGCTAGGTGCGCAGTACTAGATGTTCGTGCACTCCGC
GTGGGTGTGTGCCGTGCCG-----TGCCG-----TGCCGGTGATGATTCCATTCAAGAGAAGAGACCTCCCGT----GGG
TGGGTGATCATCTGCCCGTCTAGTTCAATCGA----GTA---TACGCTTTCAGTTTCAGCAGCA--CGAGGAGTCCGCTT
GCGCTTC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------TGTTCGTGCGAGCCTGGATTCCTTGCTTTAATTTGTGCACT--------------------------
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--AT-------TAG----TAAATAAACAACGGACTGGTCAATGCTGCTAATCCGTAC-----GTCCTAGT----------
----ACTAGAGATCATAATGGATCCAAAGCAAATATATATA------CTACATCTTGGATACGTGTATGTGCATGGCTCT
CT--AGCCGTGAAATCGTA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr3B_705
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AGAGGGAGTAT-CG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATAAACTAACAAAGATGATTAC-----TTAC-----CCGGTTTA-------------------
--------------------------------------------------------------------------------
---------------------AATGATT---CAAGAGCTCATTTAATTTGGCACTCATCATTTCATATAT-CTTTTTTGG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TAGAAATGA
AATAAAGCAGATCTAGACACTAGCTAAAAAGTCGATGT--------------------------AGCCTTGTTATTTCCT
TGGGCCACGCGGGCCGGGTGTGGTGCT-----------------------------------------------------
-------------------------------------------------------------------CCCTGCTCT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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GTGTATAAATGGAGATCAACATCCAAGGCCTCCTCCCACACA--CA------------CACGCTACAGAG----------
-------------------------CAGAGCAGAGTCTTGCTCCAGTATCTGCCCTCTCCTGCCTGCCTGTAGAGCATC-
--CATCACGTGAAGTTCACGGACAAACATGTCTCCGGTGAAGGTGTTCGGGCACCCGATGTTGACAAACGTCGCACGGGT
GCTGCTCTTCCTGGAGGAGGTCGGCGCCGAGTACGAGCTCGTGCCCATGGACTTCGTCGCCGGCGAGCACAAGAGGCCCC
AACACGTCCAGCTAAACGTAAGCAGACGACAATTCGTCGATCGGTCACCGTATCAGGTTCAGGTGATGATTTCTGACAGA
GATGCTACGTGTTTTTC-TTCCTTGCAGCCGTTTGCGAAGATGCCTGGGTTCCAAGATGGCGATCTCGTCCTGTTCGGTG
AGCCGTCTAACA---CATCAGTGCACACGACACGAATCATTCCTGTCTAGGAGTATATATCATGTTAAAAATCCATTGG-
TTGGTTTCTCTAATCTAA-----CAAATCGA----TGAGTGAGTGAGTGCAGAGTCGCGCGCCATCGCCAAGTACATCCT
CCGCAAGTACGGGGGGACAGCCGGCCTGGACCTCCTCGGAGAAAACAGCGGAATCGAAGAATTAGCAATGGTGGACGTGT
GGACGGAGGTGGAGGCCCAGCAGTACTACCCGGCCATCTCGCCCGTGGTGTTCGAGTGCATCATCATCCCCTTCATCATC
CCTGGCGGTGGCGCGGCGCCGAACCAGACCGTCGTGGACGAGAGCCTGGAGCGGCTGAGGGGTGTGCTGGGGATCTACGA
GGCCCGGCTGGAGAAGAGCAGGTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCTGAACCACATCCCGTTCACCTTCT
ACTTCATGACCACCCCGTACGCCAAGGTGTTTGATGACTACCCCAAGGTGAAGGCCTGGTGGGAGATGCTCATGGCGAGG
CCGGCGGTGCAGAGGGTCTGCAAGCATATGCCTACCGAGTTTAAGCTAGGTGCGCAGTACTAGGTGTTTATGCACTCCGC
GCGGGTGTGTGCCGTGCCG-----TGCCGTGCCGTGCCGGTGATGATTCCGTTCAAGAAAAGAGACCTCCCTCCCGTGGG
TGGGTGATCATCTGCCCGTCTACTTC----CA----GTAGTATACGCTTTCAGTTTCAGCAGCA--CGAGGAGTCCGCTT
GCGCTTCTGTTCGTGCGCTGGATTCCTTGCTTTAATTTATGCACTAGTACTAGTTAGTAAATAAACAACGGACTGGTCAA
TGCTGCTAATCCGTACTGTACGTCCTATATAGTAGTACCCCACTAGAGATCAGTATATATATACATCTTGGATACGTGTG
CATTTGCATGCAAATATATATGGACAGGGATAACTGGCACATGTGTGCCCGTTAGGAAAATTACGATCGCTCTCCTTCGG
TCGGTGGCCCGCTCGCTCGATCGAGCGTTCCTTCGGTCGGTGTCCCGCTCGCCCTTCGGTCCGTGGCCCGCTCGCTCGAT
CGAGCGTTCCTTCGGTCGGTGTCCCGCTCGCTCGATCGAGCGTTGAGGCCAGTTGGCTCGATCGCTCCGCTTTGATCGAG
TTGTGAATGCTTTCACCGGTTTTTTTTTCTTCTGATTTTTATTTTCAGAACGGTCTACTAAATAGTCACTACACCCAATA
ACCAACTCGGCCATCCTACCTTGTTATCCACAATACGTGAACAACGGAAGTTGAATTCTTCTTCTTTTTACCATGTAAAC
AAAAAGGTTAATTTTAGCCTTGATAACTTTGGCATGAGCAGCATGATAACTATGACATGTGCATCATGATTACTTTAATA
TTAACACCTGGTAACCAAAAAATTGACATGATAAAGCGGGTAAATATATCATGAGAAGGTCGGTAACTATAACATCAGAA
GCACGATAGGTATAACATGTGTAGCATGGTAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTGAACAACTC
CCCTTCCCGGGTGAAAGTTATCACGATGGTTTGAGCGTAGGTTATTAGGAGTATGATTTTGAGAGGAAGCATGGTGGCAC
ACAAAAATCGGGTGACAAAAACATGAAGTTTCGGCATACTAGGTCCCATATTTCAAAAATTACCGCGGTGTTTACATATA
CTTATCAAGTTTCCGGTTCGTATATTACCATGCTATTTACACATAAGTGGCTTTTGGGTAATTTTTTTCAACAACTCTTT
TCCTCCCTAGATCAAAACTTACCGCGGTGTTTGTGCAAAATATCAAGTCTTCTGTTTATGTATTACCATTCTATTTACAC
ATAAGTTACCGGCGTTATTTTTTCCTCCAACTTTTTCTCCTAAGGTCAAAAGTTACCGCAGTGTTTTTACATAAGTTATC
ACGTCTTCCGTTCATATATTACCATGCTATTTGCACACAAGTTACCGAGGGTATGTTTTTCAACCACTTTCTTCTTTGGT
CAATGTTACCGAGGTGTTTTTACACATGTTATCAGATCTGCACTTTGTATATTATCATGATATTCACACGCACGTTACCG
TGTGTATGTTTTTCAACAACTTTTCCCCTTCAAAAACTTTTTTACCATGGTGTTTATACGTAAGTTATTATGTATGCAAA
TTGTATATTACACATAAATTATCGGGGTATGTTTTTGAACAAATTTCCTCCTTGATCAATGTTACCGCAGTGTTTTGTAC
GTCAGTTATCGGGTATGCGGGACGTATATTACCATACCGTGTATGTTGGAAATATGCCCTAGAGGCAATAATAAAATGGT
TATTATTATATTTCTTTGTTCATGGTAATTGTCTGTTATTCATGCTATAACTGTGTTATCCGGAAATCTAATACACGTGT
GAATACATAGACCACAACATGTCCCTAGTAAGCCTCTATGACTAGCTCGTTGATCAACAGATAGTCATGGTTTCCTGACT
ATGGGCATTGAATGTCATTGATATTGGGATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCCTAAGCATAG
CTCAAAGATCGTGTAGTTCGTTTAGCTAGAGCTTTTCCAAATGTCAAGTATCATTTCCTTAAAACCATGAGATTGTGCAA
CTCCCGGATATCGTAGGAGTGCTTTGGGTGTGCCAAACGTCACAACGTAACTGGGTGACTATAAAGGTGCACTACGGGTA
TCTCCGAAAGTGTCTGTTGGGTTGGCACGAATCGAGACTGGGATTTCTCACTCCGTATGACAGAAAGGTAGCTCTGGGCC
CACTCGGTAATGCATCATCATAATGAGCTCAATGTGACCAAGTGTCTGGTCACGGGATCATGCATTATGGTACGATTAAA
GTGACTTGCCGGTAACGAGATTAAACGAGGTATTGGGATACCGACGATCGAGTCTCGGGCAAGTAACGTACCGATTGACA
AAGGGAATTGTATACGGGGTTGATTGAATCCTCGACATCGTGGTTCATCTGATGAGATCATCGAGGAGCATGTGGGAGCC
AACATGGGTATCCAGATCCCGCTATTGGTTATTGACCGGAGAGGCGTCTCGGTCATGTCTGCATGTCTCCCGAACCCGTA
GGGTCTACACACTTAAGGTTCGGTGACGCTAGGTTGTAGAGATATTAGTATGCAGTAATCCGAAAGTTGTTCGGAGTCCC
GGATGAGATCCCGGACGTCACGAGGAGTTCTGGAATGGTCCGGAGGTGAAGAATTATATATAGGAAGTCAGGTTTCGGCC
ATCGGGAAAGTTTCTGGGATCACCGGTATTGTACCGGGACCACCGGAAGGGTCCCGGGGGTCCACCGGGTGGGGCCACCT
ATCCCGGGCTGAAGTAGGAGGGGAACCAGCCCCAGGTGGGCTGGTGTGCCCCCCTTGTGCCCCCCCTGCGCCTAGGGTTG
GAAACCCTAGGGGTGGGGGCGCCTCCACCTGGTTTGGGGGGCAAGTTTCCCCCTGGCCGCCGCCTCCCCTTGGAGATCCC
ATCTCCTAGGGCCGGCGCCCCCCTTAGGGGGCCTATATAAAGAGGGGGAGGGAGGGCAGTCGCACCCATGTTCTTGGCGC
CTCCCTCTCCCATTGCTACACCTCTCCCTCTCGTAGAAGCTAGGCGAAGCCCTGCCGAGATCACTGCTGCATCCACCACC
ACGCCGTCATGCTGCTGGATCTCCGTCAACCTCTCCTCCCCCCTTGCTGTATCAAGAAGGAGGAGACGTCATCCTCAACC
GTACGTGTGTTGAACGCGGAGGTGCTGTCCGTTCAGCACTAGGATCATCGGTGATTTAGATCACAACGAGTACGACTCCC
TCAACCCCGTTCTCTTGAACGCTTCTGCTCGCGATCTACAAGGGTATGTAGATGCACTCCTTTCTCTCATTGCTAGATGA
ACTCATAGATTGATCTTGGTGAACGTAGGAAAATTGTAATTTTATGCAACGTTCCCCAACAGTGGCATCATGAGCTAGGT
CTATGCGTAGTTCTCTTTGCACGAGTAGAACACAAATTTGTTGTGGGCGTAGATGTTGTCAACTTTCTTGCCACTACTAG
TCTTATTTTGCTTCAGCGATATTGTGGGATGAAGCGGCCCGGACCAACCTTACACATACGCTTACGTGAGACAGGTTCCA
CCGATTGACATGCACTAATTGCATAAGGTGACTAGTGTTGAAATATGCCCTAGAGGCAATAATAAAAGGATTCAAGAGAA
GAGACCGGTTTCACCGACTCCGCGCGGGTGTGTGCTGTGCCGTGCCGTGCCGGTGATGACTCCATTCAAGAGAAGAGACC
TCCCGTGCCATGCCGGCGATGATCATCTGCCCGTCTATTTCGATCGAGTATTTGCTTTCAGTTTCAGCAGCACGAGGAGT
CCGCTTGCGCTTCTGTTCGTGCGAGCCTGGATTCCTTGCTTTAATTTGTGCACT--------------------------
--------------------------------------------------------------------------------
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--AG-------TATAGTATAAATAAACAACGGACTGGTCAATGCTGCTAATCCGTAC-----GTCCTAGTACT-------
--------AAGATCAGAATGGATCCAAAGCAAATATATATA------CTACATCTTGGATACGTGCGGTGTG--------
--------------------------------------------------------------------------CAGATT
TCGTTTTCCAAACCGCCGACTTAGCAGTTTATTTATTTA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr3A_705
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AGAGGGAGTATGCG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATAAACTAACAAAGATGATTAC-----TTACTCTATCCGGTCTA-------------------
--------------------------------------------------------------------------------
---------------------AATGATT---TAAGAGCTC-----ATTTGGCACTCATCATTT--TATAT-TTTTTTTGA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CAGAAATGA
AATAAAGCAGATCTATACACTAGCTAAAAAGTCGATGT--------------------------AGCCTTGTTATTTCCT
TGGGCCACGCGGGCCGGGTGTGGTGCT-----------------------------------------------------
-------------------------------------------------------------------CCCTGCTAT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GTGTATAAATGGAGATCAACATCCAAGGTCTCCTCCCACACA--CA------------CACACACACACACACACACACA
CTGACACACACACACGCACACGCTACAGAGCAGAGTCTTGCT----------CCTTCT----CCTGCCTGTAGAGCATC-
--CATCACGTAC-GTTCACGGACAAACATGTCTCCGGTGAAGGTGTTCGGGCATCCGATGTTGACAAACGTCGCACGGGT
GATGCTCTTCCTGGAGGAGGTCGGCGCCGAGTACGAGCTCGTGCCCATCGACTTCGTCGCCGGCGAGCACAAGAGGTCCC
AACACGTCCAGCTAAACGTAAGCAGACGACAATTCGTCGATCGGTCACCGTATCAGGTTCAGGTGATGATTTTTGACAGA
GATGCTACGTGTTTTTC-TTCCTTGCAGCCGTTCGCGAAGATGCCTGGGTTCCAAGATGGCGATCTCGTCCTGTTCGGTG
AGCCTTCTAACA---CATCAGTAC-----ACACGAATCATTCCTGTCTAAGAGT----ATCATGTTAAAAATCCATTGCA
TTGGTTTCTCTAATCTAA-----CAAATCGA----TGAGTGAGT----GCAGAGTCGCGCGCCATCGCCAAGTACATCCT
CCGCAAGTACGGGGGGACAGCCGGCCTGGACCTCCTCGGAGAAAACAGCGGAATCGAAGAATTAGCAGTGGTGGACATGT
GGACGGAGGTGGAGGCCCAGCAGTACTACCCGGCCATCTCGCCGGTGGTGTTCGAGTGCATCATCATTCCCTTCATCATC
CCTGGCGGTGGCGCGACGCCGAACCGGAGCGTCGTGGACGAGAGCCTGGAGCGGCTGAGGGGTGTGCTGGGGATCTACGA
GGCCCGGCTGGAGAAGAGCAGCTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCTGAACCACATCCCATTCACCTTCT
ACTTCATGACCACCCCGTACGCCAAGGTGTTTGATGAGTACCCCAAGGTGAAGGCCTGGTGGGAGATGCTCATGGCCAGG
CCGGCGGTGCAGAGGGTCTGCAAGCATATGCCTACCGAGTTTAAGCTAGGTGCGCAGTACTAGATGTCTATGCACTCCGC
GCGGGTGTGTGCCGTGCCG---------G-----TGCCGGT-----------TCAAGAGAAGAGACCTCCCGTGGCT--G
TGGGTGATCATCTGCCCGTCTAGTTC----GA----GTA---TATGCTTTCAGTTTCAGCAGCG--CAAGGAATCCGCTT
GCGCTTCTGTTCGTGCGCTGGATTCC------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------GCTTTAATTTGTGCACT--------------------------
--------------------------------------------------------------------------------
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--AG-------TAG----TAAATAAACAACGGACTGGTCAATGCTGCTAATCCGTAT-----GTCCTATATAGTACTGTA
CACCACTAGAGATCAGAATGGATCCAAAGCAAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr3D_712
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------GTATGTG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATAAACTAACAAAGATGATTACAGTACTTAC-----CCAGTTTA-------------------
--------------------------------------------------------------------------------
---------------------AATGATT---TAAGAGCTC-----ATTTGGCACTCATCATTT--C--AT-TTTTTTTGG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CAGAAATGA
AATAAAGCATATCTAGACATTACCTAAAAAGTCGATGT--------------------------AGAGTCTACAACTACT
CATATTTTATTTCATGAGC-------------------------------------------------------------
--------------------------------------CCCGGTCCAAAAAGACAAGCATAAAACTATCATCACGAAGCG
GGCAGATTAGACACTACTACCTCGTTCGGGATTATAGGTCCCTTCAGAGCAAGGTTAATAGTATAGCCAACAATGGGCTA
TATAAAGTTGCCACATCATTTATAGCCAACATATATAATAGCCATTTACAAAGTAGTACTACTAATGGATGGCCCACCTT
ACAATCACATATTGTCTCTTGAAGCACGTGTTGCAGACGGCTCTTAATCTAGGGCCCGCTTCCCTTCTCTTTCCTCTTCT
CTCTCATCGAACTCAACAAACATATAATATTGTAATCCTTACGGCCTGCTGACTATATCTTATTATACTTGTTCTCAACA
GCATCATCAGGACCAAGGCAGCAGCAGTGATTCAAACGCAGGAGCTAAATTACTCCATGCATTAGCTGCATGCTACGGTA
GCTAAATAAAATATCTCAGTGTTGCCACGAGCATACTAGCAGGAAAAGTAACACGTCACAGCATGCATTGGCTATAACCT
GCCACGACCGCACATTGCTTTTAGTGTTGCCACGAGCTTGCTAGCAGGAAAAGCAACACGTCACAGCATGCATTGGCTGT
AGCCTGCTACGAGCGTGCTAGCTCTAGTCGATGTGGACTTACAACTACTCACATTTATTTCATGAGGTCCGGTCCAAAGA
AACAAGTATAAAGCAGGTCTAGACACTATTTTTTTCGTCCGGACTTATTAGGTCCTCTCTTATTTTGGACTAAACTTTGA
GTTAAAAAAAATTTAACTAACAAAATGTTAACAATATGTCACAAAGATTATATTGTCGGAAAGCTCTTTCAAATACAAAT
CCACAATATAATTTTTTATTGTATATACTTTATATTTTAGTAGTCTTTAGATGGTCAAAGTCTGGTTCAAAATACAAAGA
AACCTAATAAACTCGGATGGAGGTAGTACCTAAAAAGTCGATGTAGACTCTACAACATTCAGAGCGACCAGTCCTGAAGC
CTTGTTAAGAGCATGGTTAATAGAGCAGCCGGCTGCTGGCTCTGTAGCAGTGCCATGTCACCTGTAGCTTTCATAGAAGA
AGTCTCGTACACTAATGCCGGCTGTAGACGAGCTGCTTCACTAGCTTGCTATATTTTGTACGGTCTTCGAGAATAATCAA
TAAAGTGGCCGTATGCATCTTTCAGATGCAGAGGCCGGGGATTATCCTTCTTTTTTAAAAAAAGACGAGCTGCTTCACTA
GTGCATAAATGGAGATCGACATCCAAGGCCTCCTCCCACACA--CA------------CACGCTACAGAG----------
-------------------------CAGAGCAGAGTCTTGCTCCAGTATCTGCCCTCTCCTGTAG---GGTAGAGCATC-
--CATCACGTGAAGTTCACGGACAAACATGTCTCCGGTGAAGGTGTTCGGGCACCCGATGTTGACAAACGTCGCACGGGT
GCTGCTCTTCCTGGAGGAGGTCGGCGCCGAGTACGAGCTCGTGCCCGTCGACTTCGTCGCCGGCGAGCACAAGAGGCCCC
AACACGTCCAGCTAAACGTAAGCAGACGACAATTCGTCGATCGGTCACCGTATAGTA-TCAGGTGATGATTTCTAACAGA
GATGCTGCGTGTTTTTTTTTTCTTGCAGCCGTTTGCGAAGATGCCTGGGTTCCAAGATGGCGATCTCGTCCTGTTCGGTG
AGCCCTCCATCCATCCATCCGTACACACGACACGAATCATTCCTGTCTAGGAGTATATATCATGTTAAAAATCCATTGCA
TTGGTTTCTCTAATCTAATCTAACAAATGGA--------TGAGTGATTGCAGAGTCGCGCGCCATCGCCAAGTACATCCT
CCGCAAGTACGGGGGGACAGCCGGCCTCGACCTCCTCGGAGAAAACAGCGGAATCGAAGAATTAGCAATGGTGGACATGT
GGACGGAGGTGGAGGCCCAGCAGTACTACCCGGCCATCTCGCCCGTGGTGTTCGAGTGCATCATCATTCCCTTCATCATT
CCTGGCGGTGGCGCGGCGCCGAACCAGACCGTCGTCGACGAGAGCCTGGAGCGGCTGAGGGGTGTGCTGGGGATCTATGA
GGCCCGGCTGGAGAAGAGCAGGTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCTGAACCACATCCCGTTCACCTTCT
ACTTCATGACCACCCCGTACGCCAAGGTGTTTGATGACTACCCCAAGGTGAAGGCCTGGTGGGAGATGCTCATGGCCAGG
CCCGCGGTGCAGAGGGTCTGCAAGCATATGCCTACGGAGTTTAAGCTAGGTGCGCAGTACTAGATGTTTATGCACTCCGC
GCGGGTGTGTGCCGTGCCG---------G-----TGCCGGTGATGATTCCATTCAAGAGAAGAGACCTCCCGTGTGTGGG
TGGGTAATCATCTGCCCGTCTAGTTC----GATCGAGTA---TACGCTTTCAGTTTCAGCAGCACGCGAGGAGTCCGCTT
GCGCTTCTGTTCGTGCGCTGGATTCC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------TTGCTTTAAGTTGTGCACTAGTCTCTACCTAATCTATAT------
------------------------------------CTATAACTATATTTATATCTATACCTACTAATTCCTATTAATAA
AAGGAATAACGCTTCTTGCCACCGTAATTTGGTCCGTCGTAATTTCGTTCGTCCGTCCGTTGCTCAAATTTTTCTGTACG
TAAACCCTGTCCCCTTCTTAGTACGTCTTTTTCTATCTGGGCCAGCCGCTGCATTGGGCCTAGGTTCGTTATTTCGTCCT
GATTTGGAGTGCAGCCCAGCCAATGTATCCAGCCCGAAGAGCAAAAAAGTAGGAGGTGCAACTGTCACGGATCGAAGGGA
GCTCCTTTTCGGCGCCTTCTGCGCCGCTTAGCGCTCCTGGCGCTCGCGCGCGCCTCTTGCGGGCCGGCCCAACAACCTGT
TCCAAAAGCGGAGGCGATAAATTTTTTTTTGCCTAAGACAGGATTCGAACGCGCGCGCTAGCGAATCGTATTTCGTATTC
GACCGTAGGAAACGACGCAACAACCATTGCACCAGGACTACTTTGCTGTCTACAAATCAAAACCAAAACTACTTAATACT
TCTTCTATTACAATATACATAAATTCTGGACACATATAAATCATTTCAAAAAAAGAAAACGTAAGTTTGAAATATAAAAA
CATAGATATGTAATAAAAAAAAGTTCACTAGTACGGATAAAAGTTCAATTTTTTTTAAAAGTTCATCGAATTCAAAAAAG
GTTCATCAATGTAGAAAAAAAGTTCACAATATTGAAAAAAACTTCACCGATTTTGAAAAAAGTTCACAAAATGTGAAAGA
AGTTCATCGATTTTCGAAAAAAACTAATCGAATTTGAAAGAAAAAGTTCATCAAATGCAAAAAAAGTTCATCAAATTTGA
AAAAGTTCATCAAATTTGAAAAAAACATTAATCGGAATTGAAAAAAGTTCATTGATTTCAAAAAAGTTCACCGAAAATAT
AAATAAGTTCATCGATTTTTGAAAAAAAAAACTAATCGAATTTGAAAGAAAAGTTCATCAAATGCGAAAAAGTTCATCAA
ATTTGAAAAGTTTCATAGAATTTGAAAAAAAGTTAATCGAAATTGAAAAAAACATTGATTTCAAAAAAAGTTCACCAAAA
ATATAAATAAGTTCATCGATTTTCAACAAAGATCATCGATTTGGAAAAAAGTTCAAAAAATAAAAATAAGTACATCAGAT
TCAAAAAAAAATAGTTCATGTACTGAAAAATAGTTCATCGATTTTACAAATAGAAACGCAAAATTGAACAAAGTTCACAC
CAGTGATCATTTAACAAAAAGTGTAAGAATGAAGAAAAAAGGAAAAAAATGTAAATAGAAAAACGAACAAAACCGTTCGA
AAAAACAGTAAGTAAATCAACTCGAAAGAAGGTAATCAATCACGTTAGAATCAGTTGGCTGGGTGGTTAGCGTCGGGTGC
TTGATACAGCAGGTCGCTGGTTAGATTCCCTCCTTACGCGCTTCTTTTTGCGATTTAACAAATAAGTAGAAAAAATTAAA
TGGGCTGGCCCAGCTCGCGGGAGGTGATGTGCGCTGCAGGCGCCCGTTAACGAAATGCACGTTAACCGGCGAACTCAGGA
AGTTAGTCTAATCCCAAAGGCTTCTGTCCCCTGACCTACCTCTGTGTTGTACGTATAAACCTGGATTTATTAGTCTATGA
AATAATCCCACCTTGCTCCGTTACATCTTATTCCACCAATTTATATTTATCTGTAAATTAAAATTAGTATGTGGCCTCAA
GGATCAAAGCGAAGGGTGAGGAAGCTATGTTGAAATAGATAAGGTGGTCTTAAGTTGTGCTTATTAAGCTAGAAGCGTGC
GTTTTTCCCGTTGCAACGCACGGGCATGTTTGCTAGTAATGATAAAGAAAATTGAGTTTCTGGTCGTCCGTCGCACCGTT
TTGCAAAAACGCCCCGTATTTTCTTCAAATCAACCCGCAGTCCGGTCGTAAGTCACCTGAACCGTTATTTTACCGTTTTA
TAGAAAAGCCCCTGTATTTTCCTGTAATCAACCCGCAGCCCGGACTTAAGTCACCCGAACCAGTTTTTTTTACATTGTTT
TGAAAACTCCCCTGACCTTTTAGGCAATTCATCCGCGGGTCATATTTAACACAAACAAATGATTTTCTAAATCATGCATA
TCTTTTAGACCGTAACTCCGATTTAAACATGTTATATATGAAATTTGATTAAAAAATATGTAGAATATGAATATGAGATT
ATTTTAACTTGTTAAATATTTTTAAATATTTTTTTGGAAGGTATTAAAGTCAAACAAATGATTTTCTAAATTATCCGTAT
CTTTTGAACCGTAACTCCGATTTTAACATGTTATATATGCAATTTCATTAGAAAAACGTGTGAAATCTGAATACGATGTT
AATTTTACCTGTTGATTACTTTTTAAATATTATTTTGGAAGCAAACTTATAATCTATAGCGCAAGATCCGTTTTTCTTTC
GTACCCGCGGCGATTATGTTGATTATTTTTTAAATACTATTTTGGAAGCAAACTTATAATCTATAGCGCACGATCCGTTT
TTCTTTCGCACCAACGGCGATTCGGATTGCAAATAAACATCCACTATAACCATATAGGGAAAAGAAAACATCAACAACTA
CACATGCATACCTTTGTAAACGTCGCATGAGAAAACAACAGATTTATCATGGCGAGTGTGAGAGAAAGCGAGAGGGAGAG
GGAGAGGGAGGAGAGAGGGAGAGAGCGACGCCATAGGATTAACCACATTCAAACATGTTTTGGTTTGTGTGAGCATTGAG
TCCATCGTCGGCGAAGGTGAGAAGGAGGATAAGCGGCAACACAAATATGACGCCCCGCTAAAATAAAGGAGATGAACATA
TTTGTGGTCTTGAATGATGATTGTTGGGTTAAGAATGTGTGTTGTGCTTTTTTTCCCGTTGCAACGCACGGGATCTTTCG
CTAG-------TAG----TAAATAAACAACAGACTGGTCAATGCTGCTAATCCGTACCTCCTATAT----TA-----GTA
CACCACTAGAGATCAGAATGGATCCAAAGCAAATATATACTATATA--TACATCTTGGATACGTGTGCATGCATGGCTCT
CCCTGGCCGTCAAATCGTACCACCTT------------------------------TCAATCT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>SNPs
------------------------------------S----------------------S--------------------
--------------------------------------------------------------------------------
------------------------------------------S--S----------------------------------
------SSSSSSSSSSS---------------------------------------------------------------
-----------------SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
-------------------------------------S------------------------------------------
S-----------------S-------------------------------------------------------------
---------------------------S-----------S------------------------------------S---
-------S--------------SSSSSSS---------------------------------------------------
-----S------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------S------------------S--------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--------------------------------S------------------------------------
-------------------------------------------------------------------------------S
SS------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-----------------------------------------------------S--------------------------
---S----------------------------------------------------------------------------
--------------------------SS---S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------SSSSS-SSSS-SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-S--S---------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------SSSSS-S-SSS-SS-SS--SS-SSSS-
SSSSS-SSSSSSS-SS--S-SSSSSSSSS-SSSSSSSSSSS-S-SSS-SSSSSS-SSSSS-SSSSSS-SS-SSS------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------SS------SS------S---SSSS
SSSSS-SSSS-S-SS-S-SSS-SSS-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S-----------S--------------
---S-----------------------------S----------------------------------------------
--S-----------------------------------------------------------------------------
----------------------S----------------S--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TATTTCCTTCAGCCGTCGGG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_4374
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ACAGTACTAGATGTTTCTCCGCG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>forward_4316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TGGTGGGAGATGCTCATGGA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>reverse_11916
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------AGTTG
AATGCCCATGCGTTG-----------------------------------------------------------------
---------------------------------------------------------
