>input_sequence_64945
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-----------------------------------------------------------ATGGGAGGAATTCTCATGCAG
CATCACCAAATCTCTCTCAGTCCTCTGCGAAAAACGGCCTTCCCCGGATCATTTGCTCTCCAAAGAGGTGATTATCAAAC
ATTGTAGTCATCTCCTTTTCGACAGAAAACATTTTCATCAAGGTCAGTGTGTTTAAGCTCCT------------------
-------------------TGTGTTCATTGCCTCGCTGGTT-ATACTTTTTGTATG-----ATTTTATATGATAC-----
ATACTATTCCCTCCGTCCCAAATTACTTGTCGTAGAAATGGATAGGAGTACAAAACAGGCACCATTGTAGTCTCTGCTGT
T-----------------------------------------------------CACTAGAAATCACCTTTTCTGCTCTT
TGCCAGATTAAATTTTCGAAAATATAAATAGTAACCGCTGATGAGAAAACCTCAGTTAACTAGTAGTAACTGCGCGGCCT
TTTGGTGAAGTCTGTCGCGCTGAATTTGGTAGCACCTGCAGATATTGCTCTCCATCGCGTTCCACGGCGGGGTTCTCTGC
CGTGCTCATCTTCCCTGACGGTCAGAGCAGAAGCCAACGGGTCCTCCACTTCAAGAATTGCGGTCAAGAAGCACAGCAAA
GAAGAGCTCATAGAGTTCTTCGGGGCCATCCAGGCCGCCATTGCCAGGGACTCTCCCAAGCCGCCCGGGAGGACGAGGAA
GCCGTCGTCGCCGGCTGGCACGTTCGAAGAAGCCGGCACGAAGATGAAACCACACGGTAACTGAAAAACATCACAGATAT
AAGTAGTTTGTTTCCTTCGTTCTGG----------ATCATCATCGATCCGCTTGTCGTTGTGACAAGGCGTGCGTGGCTT
GTGCTTTCAGAGGGACTGGGGCAAGATGGGCAGCCAAATTTCGAGGGCATGACGGTGCCCGAGCTGAGGGACTTGGCGAG
GGTGAGGGGGATGAGAGGTTACTCCAAGCTGAAGAAAGGGGAGCTGATTGATCGTCTGAGGGGTGCTTGA----------
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>chr3B_1_TraesCS3B01G154800
ACCTCGCCATCCGCGATACTGCCCAAACCAGCAATGCACTTCAAGACGCAGGAAATGGTGTACGCGTCCGGTCGAACCCC
ACAGCAGTGCATCTTCCTAAACAGCAACACACCTTCTCGTAAATCGCCGGCCTTGGCATAACCGCTCATCAGAGCAGTCC
AAACACGCACATCGCCTACCTGAGGCATTTCGTCAAACACCCTTCTTGCACTCCCCAAGTCCCCACACTTCAAGTACATC
AGCACCAATTTCTGCCCGAGAACACTGTCCATTCCATCTATTCCAAGGCCGGATGCCCGAACCAGGAAATGGGCTCTCTT
CCCACCCTCCAACGACCTCATCTCCGAGCAGAGCTGGAGGACGGCGCCGTAGCTGCGGTCATCGACCCCATCCGAGCCGA
GCAACCGCAAAGCCTCCGCCAAGTCACCCGACCGACACAGCCTCTGAATCCGCAGGTTCACGTCGGAACTCGGGGGCCAG
TTTGGCGATTTCTCGGCGTCCCTCGGAGGAGCGGCAGCCTCCGAGGCTTGGCCGGACGGTGCGAGGACGCCACACCGAAC
CCTCGCTCTCTGGCTGGTGCTCTTGGGAGGCGGCCATGGCGGCGGAGCTCGGAGGTGGCTGGAAATGGAGGCGGCTAGGG
GCGTCGCCATGGG------------AGGAGTTCAAATTTTGCCGCGAAATTCGCGCTGTCGGCGTGGTTTGGTCTTGCAA
TGGATAGCTTTCTGGATTAGGCTGCCTCTTTGGCCATCTGCCCCCTCGCATCCCTTAAAACTAACAAAATGACACATGTT
AGCTACGGTCCTTTCTGCTCCATCGACGCTAAAAGAGGT-CCATTT-TCTAACGAGGGTGTTTATGTAAAACTTCACGGA
CTGC----ATCATTTACCATCTCCGTGTGGCTGAGAAAGAGGATAGAGCACTCAGAGAGTAAGAGCAT-ACTGTCACTCC
ATTAGAGGGCAGCAAGGAGGTCAGCTTCGGTTCTTTGGCAGAGGAAGAAGAGAGGAGAAATGGGAGGAATTCTCATGCAG
CATCACCAAATCTCTCTCAGTCCTCTGCGAAAAACGGCCTTCCCCGGATCATTTGCTCTCCAAAGAGGTGATTATCAAAC
ATTGTAGTCATCTCCTTTTCGACAGAAAACATTTTCATCAAGGTCAGTGTGTTTAAGCTCCT------------------
-------------------TGTGTTCATTGCCTCGCTGGTT-ATACTTTTTGTATG-----ATTTTATATGATAC-----
ATACTATTCCCTCCGTCCCAAATTACTTGTCGTAGAAATGGATAGGAGTACAAAACAGGCACCATTGTAGTCTCTGCTGT
T-----------------------------------------------------CACTAGAAATCACCTTTTCTGCTCTT
TGCCAGATTAAATTTTCGAAAATATAAATAGTAACCGCTGATGAGAAAACCTCAGTTAACTAGTAGTAACTGCGCGGCCT
TTTGGTGAAGTCTGTCGCGCTGAATTTGGTAGCACCTGCAGATATTGCTCTCCATCGCGTTCCACGGCGGGGTTCTCTGC
CGTGCTCATCTTCCCTGACGGTCAGAGCAGAAGCCAACGGGTCCTCCACTTCAAGAATTGCGGTCAAGAAGCACAGCAAA
GAAGAGCTCATAGAGTTCTTCGGGGCCATCCAGGCCGCCATTGCCAGGGACTCTCCCAAGCCGCCCGGGAGGACGAGGAA
GCCGTCGTCGCCGGCTGGCACGTTCGAAGAAGCCGGCACGAAGATGAAACCACACGGTAACTGAAAAACATCACAGATAT
AAGTAGTTTGTTTCCTTCGTTCTGG----------ATCATCATCGATCCGCTTGTCGTTGTGACAAGGCGTGCGTGGCTT
GTGCTTTCAGAGGGACTGGGGCAAGATGGGCAGCCAAATTTCGAGGGCATGACGGTGCCCGAGCTGAGGGACTTGGCGAG
GGTGAGGGGGATGAGAGGTTACTCCAAGCTGAAGAAAGGGGAGCTGATTGATCGTCTGAGGGGTGCTTGATCGTCTGATA
ATTAACAAGGCTTCCTCTCCGAAACAGGAACAGGCAGACGCCAGTGCTGCCTGTTTGACCGAATTGATGCGGCTTATAAT
CGACTTTTC----GTCTGTTGTTTCCTTTGTTAGGAATCTTCGAAAGAGGAAGAAGCTCTGCAGTTCGATTGAAGTTATG
TAGGAGTATAATGTTGGTTAATCAGCGGATGTTGTCTTTGGAGGCCGAGCTCCATGGAGCTCGGTTTTGAAAATTTTGAA
TTTTGTCGAATTTCATATTTTCTACATTTCAAAAAATTCTAAAAAAACATACATATACATGAAGGCATAACACACATGTG
TGTAAATTTTTAGGGCAAAATAAGTTGAAAAGAGGGATGTGCAAAAAAGAAAAATCTGGGGTTTTTTAACACATGATACC
ATTCATCCTTCCATGCCATGAATTTGTTTTTTCGTACAAGTCACATTTTAACGTTTTTTATTTTGAAATTCTACACACAT
AGAAATAACATACTTGTTTACTTGCACAATTTTTTTTCAGATTTTTTTGAAATCAAAAGGTTTGAATTTTGATTTGTTTT
CAAAAAAAGGCCTCCATGGCTCCCGGGAGCCAAACGCCCGCTCTCGTTAATCAGTTTCTATCTATTCTTGCATCTAGTTT
TTCGAGGA------------------------------------------------------------------------
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-----------------------------------TTATTAAATAAGTTTATGAACAGCAGATTG---------------
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---------------------------------------------AGCCCAAAGGACCAACAAAGCCACGTCGTATTGA-
---AAACTATTTTCTCAAAAGGCCGTCCTTTGCATGGCCTGTTTTGTTGCTTTCATTAGCGTATGGTCATGTTTTCTGAA
CTTAAATTTGTTTTCTCC----CTTTTGATTGAAATAACTAAGTAACTAGGCAAGCGTTCACTTCGACATTATGAAAAGA
GGAGAATTGGAGTAGAAAGAATGTTGAATCATCAGTGGTAAAAATAAAATATAACCACAGAGAAACACTGGTGCCTTAAT
TCATTGAGCTCTTTTATGGTTATTGGCGTAGTACTGGGAGTACTTTCGA
>chr3A_1
ACCTCACCATCCGCGATACTGCCCAAACCAGCAATGCACTTCAAGACGCAGGAAATGGCGTATGCGTCTGGTCGAATCCC
ACAGCAGTGCATCCTACTAAACAGAGACACACCTTCTCGTAAATCACCAGCCTTGGCATAACCGCTCATCAGAGCAGTCC
AAACGCGCACATCGCTCACTTGAGGCATTTCGTCAAACACCCTTCGTGCACTCCCCAAGTCCCCACACTTCAAGTACATC
AGCACCAATTTCTGCCCGAGAACACTGTCCATTGCATTTGTTCCAAGGCCAGATGCACGAACCAGGAAATGAACTCTCTT
CCCACCTTCCAACGACCTCATCTGCGAGCAGAGCTGGAGGACGGCGCCGTAGCTCCGGTCGTCGACCCCAGCCGAGCCGA
GCAACCTCAAAGCCTCCGCCAACTCACCCGACCGACACAGCCTCTGAATCTGCAGGTTCACGTCGGAACTCGGGAGCCAG
TTTGGCGATTTCTCGGCGTCCCTCGGAGAAGCGGCTGCCTCCAAGACTTGGCCGGACGGTGCGAGGACGCTACACCGGAC
CCTCGCTCTCTGGCTGGTGCTCTTGGGAGGCGGCCATGGCTGCGGAGCTCGGGGGTGGCTGGAAATGGAGGCGGCTGGAG
GCGTCGCCATGGGAGCTGGAGGCAGAGGAGTTCAAATTTTGCCGCGAAATTGGCGCTGTCGGCGTGGTTTGGTCTCGCAA
TGGATAGCTTTCTGGATTAGGTTGATTCTTTGGCCATTTGCTCCCTCGCATTCCGGAAAATTCATAAAATGACACAAGTT
AGTTACGGTCCTTTCTACTCCATCGATGCTAAAAAAAGA-CCATTTCTCTAACGAGGGTGTTTATGTAAAACTTCATGGA
CTGC----ATCATTTACCACCTCCGTGTGGCTGAGGAAGAGGATAGAGCGCAAACAGAACAAGAGCGCAACTGTCACTCC
ATTGGAGAACAGCAAGGAGGCCAGCTTCGGTTCATTGGTAGAGGAAGGAGAGAGAAGAAATGGGAGGAATCCTCATGCAG
CATCACCAAATCTCTCCCAGTCCTCTGCGAAAAGCCGCCTTCCCCGGATCATTTGCTCTCCCAAGAGGTGATTGTGAAAC
ATTGTAGTTATCTCCTTTTCGATAGAGAACATCTTCATCAAGGTTAGTTAGTTAGTGCGTTTAATGATATATAGGAAACA
GGCACCATTGCAGTCATTGTGCCTGCATTGCCACATTGGTGAATACATTTTGTACTAGTACAATTTTAATGATATATAGG
----------------------------------------------------AAACAGGCACCATTGCAGTCTCTGCCAT
G---GCTCCCTCTCTTAGTTTCAGTCTCCCTTCCAACCTGACCGAAAAAAAT----------------------------
------------------------------------------------------------------------------CT
TATGGCGAAGTCTGAAGCCCTGAATTCGGTGGCATCTGCAGATTTTGCTCTCCATCGCGCTCCACTGCGGGGTTCTCTGC
CCTGCTCATCTTCCCTGACGGTCAGATCCGAAGCCAACGGGTATCCGCCTTCAAGAATGGCGGTCAAGAAGCACAGCAAA
GAAGAGCTCATAGAGTTCTTCAGCGGCATCCAGGCCGCCATTACCAGGGACTCGCCCAAGGCGCCCGGGAGGACGAGGAA
GCCGTCGTCGCCGGCTGGCACGCTCCAAGAGGCCGGCATGAAGCTGCAACCACACGGTAACTTGACAGCATCAGGATGAA
AATAATTATGTTTCCTTTGTTCTGA----------ACCATC----ATC-----------------------GCGTTGCTT
GTGCTTCCAGAGGGACTGCACCAAGACGGGCAGCCAAATTTGGAGGACATGAAGGTGCCCGAGCTGAGGGACATGGCGAG
GGTGAGGGGGATGAGAGGCTACTCCAAGCTGAAGAAAGGGGAGCTCATTGATCGTCTGAGGGGGTTGGC-----CTGATA
GTTAACAAGCCTTCCTCTCCGAGACACGAACAGGCAGAG---------------TTGATCGAACCGGTTCAGCTTACAAT
CGACTTTTCTTGCGCCTGTTGTTTTCTTTGTTAGAAATCTTCGAGAG-GGGAGAAGCTCTGCAGTTCAATTTTAGTTATG
TATATTGTTG----------------------------------------------------------------------
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---------------------------------------------GTTAATCAGCTTTTATCTATTCTTGCAACTAGTTT
TTCACTCAGGATTATAAAAA------------------------------------------------------------
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--------------------------------------------AA--TTATGAACAGCAAATTGAGGCCTTCATATGAT
AAGATTTTTATAGAAAAAATTCCTATATAGCTCTTTGGTTTGTAGGAATCGAATCCTATTCCTATCAAGAAAATCTTCCT
ATCCTTCACATTTCATAGAAAAATAAACATTAGCCTAAATTTAATAAAAAGAAATCCTATGATATGAAACAAATAATATC
TCCTTTCTTATTCCTACTCATAGGATTTGAGGTGCATGTCCCCAACCCTGTGGTTGAGTTGGTTAGGTGGACAGTGGTAT
CCCCAACCCACCAGGGTTCAAATCCTGGTGCTCGCAGTATTCCTGGATTTATTTCAGGATTTCCGGCGAAGCACTTTTAA
TGAAAGGAGACGTTTCCGTCGACGACGAGGCGCCTACGGTGACTTCAAAAATCTAGAAAACAGCAAGTATTCATCCACGA
TGATATGCCGGCTCAGTCTCTCGGAGGTGCTCATAAGGATAGGATGTGCGTGCGTGCGTTCATAGGGGTGAGTGTATGCG
CGTGTATATGAACACTTGTGTCTGTACTGATGCTCAAAAAAAAGGATTTAAAATGCATGTCATCTCATTTCCTATGATTT
TTCTATTCTTATAATTTTCTTACCCTATGAACCAAAAAAGGCTTAAGCCTAAAGGACCAACAAAGCCCCGTCGTATTTAT
TGGAAACTATTTTCTCGAAAGACCGTTCTTTGCATGGTCTGTTTTGTTGCTTTCATTTGCGTATCGTCGTG-TTTCTGAA
CTTAAATTTGTTTTTTTTTCTACTTTTGATCGAA---------TAACTATGCAAGCGTTCACTTCGACATTATGAAAGGA
GGAGAATTGGAGTAGAAAGAATGTTGAA----------------------------------------------------
-------------------------------------------------
>chr3D_1
ACCTCACCATCCGCGATACTGCCTAAACCAGCAATGCACTTCAAGACGCAGGAAATGGTGTATGCGTCCGGCCGAACCCC
ACAGCAGTGCATCTTCCTAAACAGCAACACACCTTCTCGTAAATCACCAGCCTTGGCATAACCGCTCATCAGAGCAGTCC
AAACACGCACATCACTTACTTGAGGCATTTCATCAAACACCCTTCTTGCACTCCCCAAGTCCCCACACTTCAAATACATC
AGCACCAATTTCTGCCCAAGAACACTGTCCATTCCATCTACTCCAAGGCCAGATGCCCGAACCAGGAAATGGGCTCTCTT
CCCACCCTCCAACGACCTCATCTCCGAGCAGAGCTGGAGCACGGCGCCGTAGCTCCGGTCATCGACCCCATCCGAGCCGA
GCAACCTCAAAGCCTCCGCCAAGTCGCCCGACCGACACAGCCGCTGAATCTGCAGGTTCACGTCGGAGCTCGGGGGCCAG
TTTGGCGATTTCTCGGCGTCCCTCGGAGGAGCGGCTGCCTCCAAGGCTTGGCCGGACGGCGCGAGGACGCCACACCGAAC
CCTCGCTCTCTGGCTGGTGCTCTTGGGAGGCGGCCATGGCGGCGGAGCTCGGAGGTGGCTGGAAATGGAGGCTGCCGGAG
GCGTCGCCATGGG------------AGGAGTTCAAATTTTGCCGCGAAATTCGCGCTGTCGGCGTGGTTTGGTCTTGCAG
TGGATAGCTTTCTGGATTAGGCTGCTTCTTTGGCCATTTGCCCCCTCACATTCCGTAAAACTGACAAAATGACACATGTT
AGCTACAGTCCTTTCTGCTCCATCGATGCTAAAAAAAAGACCATTT-TCTAACGAGGGTGTTTACGTAAAATTTCATGGA
CTGTCGGTATCATTTACCATCTCCGTGTGGCTGAGAAAGAGGATAGAGCACTCACAGAGTAAGAGCACAACTGTCA----
--------------------------------------CAGAGGAAGAAGAGAGGAGAAATGGGAGGAGTTCTCATGCAG
CATCACCAAATCTCTCGCACTCCTCTGCGAAAAGCGGCCTTCGCCGGATCATTTGCTCTCCAAAGAGGTGATTATGAAAC
ATTGTAGTTATCTCCTTTTCGATACAAAACATTTTCATCAAGGTCAGTGTGTTTAAGCTCCT------------------
-------------------TGTGCTCACTGCCTCGCTGGTT-ATACTTTTTGTACG-----ATTTTATATGATACATACT
ATACTACTCCCTCCGTGCCGAATTACTTGTCGCATAAATGGATAGGAGTACAAAACAGGCACCATTGTAGTCTCTGCTGT
TACAGCTTCCTCTCTTGGTTTCAGTATCGCTTTCAATCTGACCGAGTGGCAGTTCACTGGAAATCACTTCTTCTGCTCTT
TGCCAGATTAATTTTTCGAAAATAAAAACAGTAACCACTGATGAGAAAACCTCAGTTAACTAGTA---ACTACGCGGTCT
TTTGGTGAAGTCTGTAGCGCTGAATTTGGTAGCACCTGCAGATGTTGCTCTCCATCGCGCTCCACGGCGGGGTTCTCTGC
CGTGCTCATCTTCCCTGACGGTCAGAGCAGAAGCCAACGGGTCCTCCACTTCAAGAATGGCGGTCAAGAAGCACAGCAAA
GAAGAGCTCATGGAGTTCTTCGGGGCCATCCAGGCCGCCATTGCCAGGGACTCTCCCAAGCCGCCCGGGAGGACGAGGAA
GCCGTCGTCGCCGGCTGACACGCTCGAAGATGCCGGCACGAAGATGAAACCACACGGTAACTGAAAAACATCACAGAT--
--GTAGTTTGTTTCCTTTGCTCTGG----------ATCATC----ATCCGCTTGTCGTTGTGACAAGGCGTGTGTGGCTT
GTGCTTTCAGAGGGACTGCAGCAAGACGGGCAGCCAAATTTTGAGGGCATGACGGTGCCCGAGCTGAGGGACTTGGCGAG
GGTGAGGGGGATGAGAGGTTACTCCAAGCTGAAGAAAGGGGAGCTGATTGATCGTCTGAGAGGTGCTTGGTCGTCTGATA
ATTAACAAGTCTTCCTCTCCGAGACAGAAACAG------------------------ACCGAACTGATTCGGCTTACAAT
CGACTTTTCTTGCGTCTGTTGTTTTC------------------------------------------------------
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---ACTGAGGATTATAAAATGGGTCCGTCTATATTACATCTAGATGTGAGATAATATCTCACATCTAAGTATGATGTCAT
CGTCATCTTTTTATTGTTTAGCTTATTTGTTCGATTTTGATTTGTCATAAAGCCTGAAACAAACGAACCAGTTTCGCGTT
CACGTCCGCCTCGATGGGCCGGCCTATACGTCCGACAGCTCGTAGTGAGGCTAGCTTTTTACGTTGTGCATCAGCCAGCC
GAAGATTCCTTCTTGCTACATGTGTCTCTCCCTGTGCGTGCATGGTAGATCAATAGATCATATTAGATCGGATGGCGACG
TAGGGAGAAGCAGCAAGCACCTTGATAAGTTGTGTTGTGTCACTACTCGAAGCTAAGGCTCAGATTTTTTTTTCCAGGAA
AAGCTAGTGATCAGATGTATATCAGTGAAAGTAAAGTAGCTCTACCATCGATTTGTTAGTTTTTGCGTTTTATTGCCCAC
TTTTTAGCGGCCTGTCTCTGATCGCTAGCTTCTAATAGGCTATAAATGATTTTTTTTGCCCTTTGGTTCTTGCTTTCCCG
TTCCACTCTTTATATTTTATGCATTAATTTTCAGTAAAAGACAAAGTTTGATTAAAAAAATCAGAAATATGTTCACGAAT
TTGTGGTAATATACATTTTTTAATATACGGTGAACTTTTTTATATACAATGAACTTTTTAAATTATATTCACTAAACTTT
TTTAATACACACTAAATATTTTTTAAATACAAACTTAACCTTTTTTAATATACGTAGAACCCTTTTAAATATACGATAAA
ACATTTTTATAATATACACTAAATAATTTTTTAAACACATACAGAACAATTGATCGTGCATCCAAAAGTGTTAAAATTGT
TCGTGGATTCAGAAAATGTTCGCCGATTCAAAATAAATAAACCACAAAGCTCCAGAAATTTCATGAATTGAAAATTGTTC
ATATATTTGAAAATGTTCAAAAAAATTAAAAACAAAATGCGAAGCAAAAGAAGAAGAAAAAAAGAAATAGAAAAGACCAA
AAGAATAACCAGAAAACCAATAGAGGATGGAAGTGCAATTGGGACGAAACAAACTACAAGCCTAGTTGCAAGTTGAGGGC
GGACTTACAACTCGGACAACTACACAAAACTAAAATATCATTTGCGATTCAAGGATGGGCTTGCAATTGGGAGAATAATA
AACTACAAGCCCAGTTGCGTGTCGAGCGTGGATTTGCAATTGGGATGAAAAAAATACATGTTCAGTTGCAAGTCGGGGGT
GAACTTGCAACTGGGGTGAAAACAAAACAACACCCTCCTGAGTTGCGAGTCGAGGGTGGACTTGCAACTGGGCCGACAGA
AACCCCTAGTTGCAGGTCGAAGGTCTAATTGCAACTACTATGAAACAAGAACAAAAAACAACACCCCCCGAGTTGCGAGT
CGAGGGTGGACTTGCAACTAGGGCTACAAAACTACACCCTCCCGAGTTGTGAGTACACGATTGACTTGCAACTGAGCGAT
TACAAACTACATCCCTCGAGTTGCAAGTCGGGTGTGGACTTGCAATTGGGGTGAAAACAAACAACAAACGACNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCTACATCCCTCGAGTTGCAAGTCAGGGGTGGACTTGCAAATGGGATGAAACAAAACAACACCC
TCCCGAGTTGCGAGTCGAGGGTAGACTTGCAACTGGGCCGACAGAAACCCCTAGTTGCGGGTCGAGGGTCTAATTGCAAC
TACTATGAAATAAGAACAAAAAACAACACCGCCCGAGTTGCGAGTCGAGGGTGGACTTGCAACTGCGACAACTACAAAAC
TACATCCCCGAGTTGCGAGTACATGGTTGCCTTGCAACTGGGGCGATTAGAAACTAGGGCGACTGAGTTGGATGAGCAAG
GCCGACAAAGTAGTCACCAGACCCACGACGTGACATGATACCCGTGCGAGAAAACAACTCTCGATCAAGATTTGCATGAC
ATTTAAAGCGAAAAGATGGCTGAGTGAAAATTCATAAATTAAAAAAAGAAAAAAGAAAACAAAAAAGAAATATAAATAAA
AGACAAAAGATCATGAGTATAAAATACTTCATAATTTAAAACAAATAATGAAACAAAAAAATAAAAATAAAAAGGTAAAA
CGACGAGGCAAAAATAAATGGAAAGACATGGCGCCTTATTTCCAGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNACATGGTTGCCTTGCAACTGGGGCGATTAGAAACTAGGGCGACTGAGTTGGATGAGCAAGG
CCGACAAAGTAGTCACCAGACCCACGACGTGACATGATACCCGTGCGAGAAAACAACTCTCGATCAAGATTTGCATGACA
TTTAAAGCGAAAAGATGGCTGAGTGAAAATTCATAAATTAAAAAAAGAAATATAAATAAAAGACAAAAGATCATGAGTAT
AAAATACTTCATAATTTAAAACAAATAATGAAACAAAAAAATAAAAATAAAAAGGTAAAACGACGAGGCAAAAATAAATG
GAAAGACATGGCGCCTTATTTCCAGAGCACAAGCACGCGAATGGCTCAAAAAAAAAAAGACAACCAGCTCTAAAGACTAC
AGGAGACCGGCACACACAATAAATCGATGGAAAAAATTCCACAATAGGAGCGGCCCAGGCAAAGCAAAGCTGGCAGCTAT
AACGCGAAGCGGCCCAGGCAACAAAAAAGTTGTTACGCACGCGTCTTGACAAACAAAAAGACACGAAGCTCCTAAAAAAA
ACAAGACACGAAGAAGCGAAGGCAAAAATCACGAATCTTAATATGCTATATCTAATGGCTAGGAAGTTAGATGTGAGATA
ATTATTTCACATCTAGATGTGAAATAGCAAACCTGTTATAAAATAAGTTTATGAACAGCAGATTG---------------
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---------------------------------------------AGCCTAAAGGACCAACAAAGCCACGTCGTACTGA-
---AAACTATTTTCTCAAAAGGCAGTCCTTTGCATGGTCTGTT-------------------------------------
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>chr3D_1115
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-------------CCTTTTCGACAGAAAACATTTTCATCAAGGTCAGTGTGTTTAAACTTCT------------------
-------------------TGTGTTCATTGCCTCGCTGGTT-ATACTTTTTGTACG-----ATTTTATATGATACATACT
ACTC--------------------ACTTGTCGCCGAAATGGATAGGAGTACAAAAC-----CCATTGTAGTCTCTGCTGT
TACAGCTTCCTCTCTTGGTTTCAGTATCTCTTTCAATCTGACCGAGTGGCAGTTCACTGGAAATCACTTTTTCTGCTCTT
TGCCAGATTAATTTTCTAAAAATAAATATAGTAACCACTGATGAAAAAAGCTCAGTTAACTAGTAGTAACTGCGCGGCCT
TTTGGTGAAGTCTGTAGCGCTGAATTTGG-------TGCAGATATTGCTCTCCATCGCGCTCCACGGCGGGATTCTCTGC
CGTGCTCATCTTCCCTGGCGGTCAGAGCAGAAGCCAACGGGTCCTCCACTTCAAGAATGGCGGTCAAGAAGCACAGCAAA
GAAGAGCTCATGTAGTTCTTCGGGGCCATCCAGGCCGCCATTGCCAGGGACTCTCCCAAGCCGCCCGGGAGGACGAGGAA
GCCGTCGTCGCCGGCTGACACGCTCGAAGATGCCGGCACGAAGATGAAGCCACACGGTAACTGAAAAGCATCACCGAT--
--ATAGTTTGTTTCCTTTGTTCTGGAATCTGGATCATCATC----ATCCGCTTGTCGTTGTGACAAGGCGTGCGTGGCTT
GTGCTTTCAGAGGAACTGGGGCAAGATGGGCAGCCAAATTTCGAGGGCATGACGGTGCCCGAGCTGAGGGACATGGCGAG
GGTGAGGGGGATGAGAGGTTACTCCAAGCTGAAGAAAGGGGAGCTGATTGATCGTCTGAGGGGTGCATGGTCGTCTGATA
ATTAACAAGTCTTCCTCTCCGAGACAGAAACAG------------------------ACCGAACTGATGCAGCTTACAAT
CGACTTTTCTTGCGTCTGTTGTTTTC------------------------------------------------------
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---ACTGAGGATTATAAAAT------------------------------------------------------------
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--------------------------------------------AAGTTTACGAACAGCAGATTG---------------
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---------------------------------------------AGCCCAAAGGACCAACAAAACCACGTGGTATTGA-
---AAACTCTTTTCTCGAAAGGCCGTCCTTTGCATGGTCCTTTTTT----------------------------------
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-------------------------------------------------
>SNPs
-----S--------------------------------------------------------S-----------------
---------------------------------------------S--S-------------------------------
---------------S---S------------------------------------------------------------
--------------------------------------------------S-----------------------------
------------------------------------------------------S-------------------------
------S-------------------------------------------S-----------------------------
-----------------------------------S------S-------------------------------------
----------------------------------------------------------------------------S-S-
--------------------------------------------------------------------------------
-------------------------S-----------S-------------S--S-------S-----------------
--------------------------S-------S-S-S-------------------------------------S---
------------------------------------------------------S------------S------------
---S---SS-----------S------------S----------------------------------------------
----------------S----------------S-----------------------------------------S----
--------S-----------------------------------------------------------------------
------------------------------------------------------S-------------------------
------S---------S--S------------S-----------------------------------------------
----------------------------------------------------------S--------S------------
-----------S------------S-----------S-------------------------------------------
---------------S-------------------------------------------S--------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
----------------------S-------S------------------------------------------------S
-----------------S-----------------------SSSS-----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
---------S------------S---------------SSSSSSSSSSSSSSSS---------S------------S---
------------------------S---------S---------S--S--S----------------S---SS-------
--SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S--S--------------S-------
---SSS--------------------------------------------------------------------------
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-------------------------------------S-------------------S------S---S--S--------
--------------S-SS------------S---SSSSSSSSS------S---------------------------S--
----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_451
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-------------------------------CCGACACAGCCTCTGAATCC-----------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_1882
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ATCGATCCGCTTGTCGTTGT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_994
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------AGGAGGTCAGCTTCGGTTCT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_2134
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TTTGACCGAATTGATGCGGC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
