>input_sequence_64932
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----------------------ATGGCTAGGGTGCGAAACCCTCTCGTCGTCGGAAAGGTCATCGGGGAGGTCATTGACA
ACTTCAACCCGATGGTGAATATGACGGTGACCTACAGCTCCGACAAGCAGGTGTCCAATGGCCACGAGTTCTTGCCGTCG
GCGGTCGTGTCCAAGCCACGTATTCAGGTCCCGGGCGGCGACATGAGATCTTTCTTCACTCTGGTTTGCGCTTCCTCTCC
TCCTT-----GGCCACCTGACGCGTACACA--AAGTAAGCTAGC-TAGCATACAGCTGATAACCGAGTATGATTGCTGCT
CTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTGAGGGAGCATCTCCACTGGTAATTATACTA
ACCCAACCTAG---------CTCAATCGATCAGAAGTCCAA-C---CAGTACAATTA-----------------------
-----------------CCATGTATAT--------CGAA-TGC----------------------------TCAGTCCAA
GTGATCGAGCAC----------AAATTAATTATCTGGTGACCCATTAGTTGCATTCCTGTGGGCATCAAACCTGTTAGTT
TTTGTCTAGTGAGCATAAATTGGCACAGATTTATATGATCAGCTATGCATAAGAATATGTTTATC-------AGGCTATG
AGCTTTTGTGTATATGCAGGATCGTCACTGATATTCCTGGCACCACTGACGCTTCTTTCGGTCAGTGCCCT---------
------------TTTCTCTCATTGGCTACATCCTTAA-TTTGTCTGGATAAACATGCACTTGAATAATGCATGCAGGGAG
CGAGGTGGTGAGCTATGAGAGCCCGAAGCCCACCATCGGCATTCACCGGTTCGTCTTCGTGCTGTTCAAACAGAAGAAGC
GGCAGGCTGTGAACCCTCGAGCTCCTTCCACCAGGGACTGCTTCAACACTCGCCGCTTCGCCGACGAGAACGACCTCGGC
CTCCCGGTCGCTGCCGTCTACTTCAACGCGCAGCGGGAGACAGCGGCGCGCCGCCGCTGA--------------------
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>chr4D_1_TraesCS4D01G305800
TTCTCGCCCTCAAATTCAACTGCTCTCTGTGCATCTTTGCCCTCATCCCCCTATTTGAATTTCAATCTCAATTTCGTTGA
TTCTTTTCTCCAGTTTGTTGTTCTTCTTTGCAACATCACGAATGACATCTTTTGCCCTACCTTCCCATTCATTGTCAATC
CACTTTTCATATTCACAAGCTATAAAACCCTTCAAATGAAAACCTAGAAACCTCTTCCTAGTTGCTCCGTCGTAGCAAAC
ACGCCGAACAGAGCATAGGAGATGCCCACATCACTTGTGCTTCCTAGCGATGCCATTGAAGTTGGCATAGTATTCAAATT
GCGGGAGCCCAAACTCAAATTCCGGCAAATCCTCTGTCTCCGTCGAAGGTTGAATTTCATCCTATATAATTACACGATGG
AGGTTACCTTGGCTCATGACTCGCCGCCGCCCACCTCACCGGTGGGACCAACGAGCTTCCTTGATGTCGCTGATGTCATC
ATTGCCGCCAAGGTAGACTGGAGGTGGGGAATGGCGGCACGCTGGTTGATTGGTGGTGGCGGGGGGCGACGGTGCTAGCT
ATGAGGCGT-----------------------------------------------------------------------
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-----------------------------------------TGGTAGGCCTTGAATGGGCCGGGAGAGGCAGCTTGGGTC
GGATGGGGGTGGCGCCACCGGTGAAAATAGCCGGGTTGACGAACTCGCGGTCGACGACAATGGTTGTTGGGGGGAGGAAA
GTTCTCGCGTGCACAACTAGGGTTTTGG----------------------------------------------------
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---------------------------------------------------------GGAGGGGATTGGGAGGTAAAGCT
TTGCTCCCTATATATTGGGAGGGGAAGGCTGTTTTTTTTGGCCAGCTCAAAAAGCCTTTGGGAGTTATAACCGATTAAGT
AAAAAAAAA-GGTTCTCTAGGAATGAGAGATCGATTTGCTGTGCTTCGACCAGATATGCTGTTGCACAGCTATAAATAGA
GCATCTACGCCACCCAATCTCGGCAACAACCATCAGGTTAGAGTTCCTCATTCCTCAAGGCTTTGTTTAGCTCGTGCTTC
TACTACCAGCAGCTTGGTAGCCATGGCTAGGGTGCGAAACCCTCTCGTCGTCGGAAAGGTCATCGGGGAGGTCATTGACA
ACTTCAACCCGATGGTGAATATGACGGTGACCTACAGCTCCGACAAGCAGGTGTCCAATGGCCACGAGTTCTTGCCGTCG
GCGGTCGTGTCCAAGCCACGTATTCAGGTCCCGGGCGGCGACATGAGATCTTTCTTCACTCTGGTTTGCGCTTCCTCTCC
TCCTT-----GGCCACCTGACGCGTACACA--AAGTAAGCTAGC-TAGCATACAGCTGATAACCGAGTATGATTGCTGCT
CTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTGAGGGAGCATCTCCACTGGTAATTATACTA
ACCCAACCTAG---------CTCAATCGATCAGAAGTCCAA-C---CAGTACAATTA-----------------------
-----------------CCATGTATAT--------CGAA-TGC----------------------------TCAGTCCAA
GTGATCGAGCAC----------AAATTAATTATCTGGTGACCCATTAGTTGCATTCCTGTGGGCATCAAACCTGTTAGTT
TTTGTCTAGTGAGCATAAATTGGCACAGATTTATATGATCAGCTATGCATAAGAATATGTTTATC-------AGGCTATG
AGCTTTTGTGTATATGCAGGATCGTCACTGATATTCCTGGCACCACTGACGCTTCTTTCGGTCAGTGCCCT---------
------------TTTCTCTCATTGGCTACATCCTTAA-TTTGTCTGGATAAACATGCACTTGAATAATGCATGCAGGGAG
CGAGGTGGTGAGCTATGAGAGCCCGAAGCCCACCATCGGCATTCACCGGTTCGTCTTCGTGCTGTTCAAACAGAAGAAGC
GGCAGGCTGTGAACCCTCGAGCTCCTTCCACCAGGGACTGCTTCAACACTCGCCGCTTCGCCGACGAGAACGACCTCGGC
CTCCCGGTCGCTGCCGTCTACTTCAACGCGCAGCGGGAGACAGCGGCGCGCCGCCGCTGATGTGGAAA------------
------------------------ATGCTACAAGCCTATGGATCAAGTTATGGCTTAGCTACTGGTATTAGCTATATATA
TATGGCTCCGTTAAAATAAGAGTTTGCTTGTG---GTCTTGTGTCCACTGTTTCTGCTAGTCTTCCTACTGTTCAGC---
-TCTTCGGTTAGTTTAATTAGTTGCTCCTACTAGTCAACCTGTGAGCTTGTGTACG---------------CCACTAGAG
TGAATTTAGTTCAACTCCTATTTTGTACGT--------------------------------------------------
-----------------------GTTCACTGGGACTCTGGGAGCAGAATGA----TAGCTAGCAGAAGACCGTCGACGTG
TCTGGTAGTAGTAGGCTAGTGAAAGGTGGAAAAGGCACAATGGC--TGTGGCCCACCTACCTGCGCTACTGTTGTTGCCC
TCAGGGCCTATAATCTTTCTTACCCGTTTTGAACCTCGTACTATTTTCATTTCTGTAAGGACCTCATCTTTAAGGCCG--
----CGTCTCCGCTCTAAAAA-----------------------------------------------------------
---ATATATATGCCTTGCATGGTTGATCTTGATTGTCT----------GAGTATATAGATACTAGATCTTGCCGTATCTG
TTGTGTGT--GTGTGCAATTTGTAATATTAATTGATATGGCTGGTTGTGGCTGGTGTGAAGAGGCATCAGTTCTTGGCCA
TCCTTTTCCCACCATTTTGGTGTCCCGGCCCCTTTGGTCGATTTGGCAATCTTTGATCATTAGCATATATATGCGCCTAC
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----------------------------------------------------------------------------GTAT
GCCTTCCTTAATTAAGTTTGTGCACTTTCTGGGTCAACATGCCTAGCTATAGTTTATATCCATGAAAAACTAACGTTAAT
ATGTATGAGTCATAATATCTAACATGATGCATAATAGAAGATTTAACAACCTACTGGTTGTAGCAAATGGCTAACTAAGA
CAATCAACAAACATGGAAG------------------GTACAAGTAGTTTCAACGGATGGTACAATTACACAAAGTAGAT
TGGAGTGGTTTACATATATCCAACATATCATTTAATCATTACCAAGAGTTCAAATGTTCTCACATGGTCATTCACAAGGG
CAAAGAGTTAT
>chr4B_255
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--------------ATAGGAGATGCCCACATCACTTGTGCTTCCTAGCGATGCCATTGAAGTTGGCGTAGTATTCAAATT
GCGGGAGCCCAAACTCAAATTCCGGCAAATCCTCTATCTCCGTTGAAGGTTGAATTTCATCCTATATAATTACACGATGG
AGGTTACCTTGGCTCCTGACTCACCGCCGCCGACCTCTCCGGTGGGACCAACGGGCTTCCTTGATGTCGCTGACGTCATC
ATCACCGCCAAGGTAGATTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTAGGCCTTG---------------------------
-GATGGGGGTGGCGCCACCGGTGAAAATAGCCGGGTTGACGAACTCGCGGTCGACGACGATGGTAGTTGGGGGGAGGAAA
GTTCTCGCGTGCGCAACTAGGGTTTTGG----------------------------------------------------
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---------------------------------------------------------AAAGGGGATTGGGAGGTAAAGCT
T------------------------------TTTTTTTTGGCCAGCTCAAAAAGCCTTTGGGAGTTATAACCGATTAAGT
AAAAAAAATAAGTTCTCTAGGAATGAGAGAT----TTGCTGTGCTTCGACCAGATATGCTGTTGCACAGCTATAAATAGA
GCCTCTACGCCACCCAATCTCGGCAACAACCATCAGGTTAGAGTTCCTCATTCCTCAAGGCTT-GTTTAGCTCGTGCTTC
TACTACTAGCAGATTGGTAGCCATGGCTAGGGTGCGAGACCCTCTCGTCGTCGGAAAGGTCATCGGGGAGGTCATTGACA
ACTTCAACCCCACGGTGAATATGTCGGTGACCTACAGCTCCGACAAGCAGGTGTCCAACGGCCAGGAGTTCTTGCCGACG
GCGGTCGTGTCCAAGCCACGCATTCAGGTCCCGGGTGGCGACATGAGATCTTTCTTCACTCTGGTTTGCGCTTCCTCTCC
TCCTT-----GGCCACCTGACGCGTACACA--AAGTACGCTAGC-TAGCATCCAGCTGATAACCGAGTAT-ATTGCTGCT
CTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTGAGGGAGCATCTCCACTGGTAATTGTACTA
ACCCAACCTAG---------CTCAATCGGTCAGAAGT-CAA-C---CAGTACAATTA-----------------------
-----------------CCATGTATATATATATATCGAA-TGC----------------------------TCACTCCAA
GTGATCGAGCAC----------AAATTAATTATCTGGCGACCCATTAGTTGCTATCTCATGGGCATCAGTCCTGT---TT
TTCGTCTAGTGAGCATAAATTGTCACAAATTTATACGATCAGCTATACATAAGAATATGTTTATC-------AGGCTATG
AGCTTTTGTGTACATGCAGGATCGTCACTGATATTCCTGGCACCACTGATGCTTCTTTCGGTCAGTGCCCT---------
------------TTTTTCTGATTGGCTACATCCTTAA-TTTGTCTGGATAAACATGCACTTGAATAATGCACGCAGGGAG
CGAGGTGGTGAGCTATGAGAGCCCGAAGCCCACCATCGGCATTCACAGGTTCGTCTTCGAGCTGTTCAAACAGAAGAAGC
GGCAGGCTGTGAACCCTCGAGCTCCTTCCACCAGGGACTGCTTCAACACTCGCCGCTTCGCCGACGAGAACGACCTCGGT
CTCCCGGTCGCCGCCGTCTACTTCAACGCGCAGCGGGAGACAGCCGCGCGCCGCCGCTGATGTGGAAA------------
------------------------ATGATACAAGCCTATGGATCAAGCTATGGCTTAGCTACTGGTAGTAGCTATATAA-
----------TTCAAATAAGAGTTTGCTTGTG---GTCTTGTGTCCACTGTTTCTGGTAGTCTTCGTACTGTTCAGC---
-TCTTCGGTTAGTTTAATTAGTTACTCCTACTAGTCAACCTGTGAGCTTGTGTACG---------------CCACTAGAG
TGAATTTAGTTCAACTCCTATTTTGTACGT--------------------------------------------------
-----------------------GTTCACCGGGACTCTGGGAGCAGAATGAATGATAGCTAGCAGAAGACCGTCGACGTG
TCTGGTAGTAGTAGGCGAGTGAAAGGTGGAAAAGGCA--ATGGC--TGTGGCCCACCTACCTGCGCTACTGTTGTTGCCC
TCAGGGCCTATAATCTTTTTTACCCGTTTTGAACCTCGTACTATTTTCATTCCAGTAAGGACCTCATCTTTAAGGCCGGG
CAAGTATCTCCGCTCTAAAAA-----------------------------------------------------------
---ATATGTATGCCT----TGGTTGATCTTGATTGTCT----------GAGTATATAGATACTAGATCTTGCCGTATCTG
TTGTGTGT--GTGTGCAATTTGTAATATTAATTGATATGGCTGGTTGTGGCTGGTCTGAAGAGGCATCAGTTCTTGGCCA
TCCTTTTCCCACCATTTTGGTGTCCCGGCCCCTTTGGTCGATTTGGCAATCTTTGATCATTAGCATATATATGCGCCTAC
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----------------------------------------------------------------------------GTAT
GCCTTCCTTAATTAAGTTTGTGCACTTTCTGGGTCAACATGCCTAGCTATAGTTTATATACATGAAAAACTAATGTTAAT
ATATATGAGTCATAATATCTATCATGATGCATAATAGAAGATTTAACAACCTACTGGTTATAGAAGATGGCTAACTAAGA
CAATCAACAAACATGGAAG------------------GTACAAGTAGTTTCAATGGATGGAACAATTACACAAAGTAGAT
TGGAGTGGTTTACAAATATCCTACATATCATTTAATCATTACCAAAAGTTCAAATGTGCTCACATGGTCATTCACAGGGG
CAAAGAGTTAT
>chr4A_322
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-CGGGAGCCCAAACTCAAATTCCGGCAAATCCTCTGTCTCCATCAAAGA-TGAATTTCATCCTATATAATTACATGTTGG
GGGTTACCTTGGCTCATGACTCACCGCCGCCCACCTCTCCGGTGGGACCAACGGGCTTCCTCGATGTCGCTGACGACATC
ATTGCCGCCAAGGTAGATTGGAGGAT--GAATGGAGGCACACGAGTTGATTGGTGGTGGCGGGCGGCGACGACACTAGCG
ATGAGGCAT-----------------------------------------------------------------------
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-----------------------------------------TGGTAGGCCTTGAATGGGCCGGGAGAGGCAGCTTGGGTT
AGATGGGGGTGGCACCACCGGTGAAAATAGCTAGGTTGACGAACTCGGGGTCGGCGACAATGGTAGTT-GGGGGAGGAAA
GTTCTCGCGTGCGCAAGTAGGGTCTTAGGCCAACTCCAACGCGCGATCCCATCCTGTCCGGGTGCATCCGTTTGGGGTAA
AACGGACGAACCAGACAACCCAGCGTGCGGGCTCAAACGGACTTTTGTCCGTTTTCTGTCCGCTTTCGACCCATCCCCGG
CCCAAGTTTGCGCCGCTTTTGGGGTGGAACGGATAGTGCGCTGACGGGCGGGCCGTGTGCGCGTGTTCTCCCCTGGCCTG
CCCGTCGGTGGCATAGGGACGCGTTTTTCTATCCGCCCCCTCCCTCCCTCCGGTCGCACCCCCTCCACTCTTCTCCACTC
TTCCTCTCGCCACCGCCGCCACTGCCATTGCAGCTGTGCAGCTCGGACGCGCGCACACCCCGCCCTTTCCCCTTGGCGCC
CTGAGCTACCCAACCACGGCCACCTGATTTGCGCACCCGGCGGTCGGATTTGGAGCGGATCCGGTCGGTCTTGAGCTCTT
CCGGCTGTGGGAGGCCGCATCGCGCCATGGACTGGCCAGGCACCGGGCCAGAAGGCCCCGACAAGGCCGCAAGGCCGCAT
GCAGGTAGTGACTCCTCCTCTAGCCGCTTGGATCTACACCGTCGGTGGTCCGCCGACAGATACATGAATGGCGGTTGGCC
GGACTCGGTGCTAGCCCAAAAGCTCGTCGGCGCACCGTTGCCACTCATTAAGTGCGACCACTGCCTAAAGAAGGTCGTGC
GCCGCGTGTCTACAACGCCGGAACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTATTTTTAGC
TTCAGTTGTGCTCTTGGATTTGACTAATTGTGCTAACTTAAAATTTTATTGTGTAGCATGAATGCAAGTTTTGGTATTGG
GAAGAATAGTACATCGATATATTGATAGAGCTCAATTTAGTAGATGTTCGTGCACTTGCTAGAGATGAGACTAGTGCACT
TGTTGCTAGAATAGAGGCTAGACATGAGACTAGATGCGAGGAAGCAAGCTCTATTTCTTTAGACTCGAAGAAAAAAGAAG
CATGCAACATCGAGCCTTCTCCACATATCAACAATGAATGCATCGAGAAGGCACTAATCCAACTTACAGGAGCAGTTATG
GAAGTTGGATATCTTCTAAAATGTATTCTTGTAGTTCTTGTTTTACTTGGTCTTGTTTTTCTAGTTAAAATTTGGTGATG
TATTCCCATGTGCCAAAAATGAATGATGAAAAAAAGTTAAGGGCTTGCAAAGAAAAATGTACGTGGACAGGATGCGGCCG
GGATGCATCCATGCGTTGGGTGCGCGGCCACCGCATCCCAGAAACTGCCCGGACACGACCCCATTGCCCTACCTAAACGG
ACAGAATCCGGACAAAACAGACGTCCGTTTGGGGTCGTGCGCTGGAGTTGGCCTTTAGGAGGGGATTTGGAGGTAAAGGT
TT-CTCCGTATATGTTGGGAGGGGA------TTTTTTTTTGCCAGCTCAAAAGGCCTTTGGGAGTTATAACCGATTAATT
AAAAAAAAT-AGTTCTCTAGGAATGAGAGAT----TTGCTGTGCTTCGACC---------GTTGCACACCTATAAATAGA
GCCTCTACGCCACCCAATCTCGGCAACAACCATCAGGTTAGAGTTCCCCATTCCTCAAGACTTG---------GTGCTTC
TACTACTAGCAAGTAGGTAGCCATGGCTAGGGTCCGAAACCCTCTCGTCGTCGGAAAGGTCATCGGGGAGGTCATTGACA
ACTTCAACCCCACGGTGAATATGACGGTGACCTACAACTCCGACAAGCAGGTGTCCAATGGCCAGGAGTTCTTGCCGTCG
GCGGTCGTGTCCAAGCCACGCATTCAGGTCCCGGGCGGCGACATGAGATCTTTCTTCACTCTGGTTTGCGCTTCCTCTCC
TCCTT-----GGCCACCTGACGCGTACACACAAAGTAAGCTAGC-TAGCATCCAGCTGATAACCGAGTATGATTGCTGCT
CTTCAGGTCATGACGGACCCGGATGTGCCAGGGCCTAGCGATCCATACCTGAGGGAGCATCTCCACTGGTAATTGTACTA
ACCCAACCTAG---------CTCAGTCGATCAGAAGT-CCATC---CAGTACAAAGAAATATATAGTTAGCTAGATTGGA
AAAAAATATCTCATGAGCCATGTATAT--------CGAATTGC----------------------------TCAGTCCAA
GTGATTGAGCAC----------AAATTAATTATCTGGTGTCCCATTAGTGGCTATCCTATGGGCATCAAACCTGT---TT
TTTGTCTAGTGAGCATAAATTGGCACAAATTTATATGATCAGCTATGCATAAGAATATGTTTATGAATTATGAGGCTATG
AGCTTTTGTGTACATGCAGGATCGTCACTGATATTCCTGGCACCACTGATGCTTCTTTTGGTCAGTGCCCCTTTTTCTGA
T-----------------TGACTGACTACATCCTTATTTTTTTCTGGATAAACATGAT------TAATGCATGCAGGGAG
CGAGGTGGTGAGCTACGACAGCCCAATGCCCAACATCGGCATTCACAGGTTCATCTTCGTGCTGTTCAAACAGAAGAAGC
GGCAGGCTGTGAACCCTCGAGCTCCCTCCACCAGGGACTGCTTCAACACTCGCCGCTTCGCCGACGAGAACGACCTCGGC
CTCCCGGTCGCCGCCGTCTACTTCAACGCGCAGCGGGAGACAGCCGCGCGCCGCCGCTGATGTGAAAA------------
------------------------ATGCAACAAGCCTCTGGATCAAGCTATGGCTTAGCTACTGGTATTAGCTATATATA
TATGGCTCCGTTCAAATAAGAGTTTGCTCGTG---GTCTTGTGTCCACTGTTTCTGGTAGTCTTCCTACTGTCCACT---
--------------------GTTACTCCTACTAGTCAACCTGTGAGCTTGTGTACG---------------CCACAAGAG
TGAATTTAGTTCAACTCCTATTTTGTACGTAC------------------------------------------------
---------------------GTGTTCACTGGGACTCTGGGAGCAGAATGA----TAGCTAGGAGAAGACCGTCGACGTG
TCTGGTAGTAGTAGGCTAGTGAAAGGTGGAAAAGGCA--ATGGCTTTGTGGCCCACCTACCTGCGCTACTGTTGTTGCCC
TCAGGGCCTATAATCTTTCTTACCCGTTTGGAACCTCGTACTATTTTCATTCCTGTAAGGACCTCATCTTTAAGGCCGGG
CAAGCGTCCCCGCTCTAAAATATA--------------------------------------------------------
--TATATATATGTCT----TGGTTGATCTTGATTGTCTGATGAGTACGGAGTATATAGATACTAGATCTTGCCGTATCTG
TTGTGTGTGTGTGTGCAATTTGTAATATTAATTGATATGGCTGGTTGTGGCTGGTGTGAAGAGGCATCAGTTCTTGGCCC
TCCTTTTCCCACCATTTTGGTGTCCCGGCCCCTTTGGTCGATTTGGCAATCTTTGATCATTAGCATATATATGCGCCTAC
GCAGTAGCGGCGGCAGGAAAAAGGAACGCCCCAGGCAGCCTCCAGGGAACTGTAGCACTGTAGCTACAGTACTGCTACAA
TGCCCAAAGAAAATGCATCTCACGCCCCAGGCAGCAGCCCAGACTGCCTGGGGCCTGTCTCCGCCACTGCGCCTACGTAT
GCCTTCCTTAATTAAGTTTGTGCACTTTCTGGGTCAACATGCATAGCTATAGTTTATATACACGAAAAACTAACGTTAAT
ATATATGAGTCATAATATCTAACATGATGCATAATAGAAGATTTAACAACCTACTGGTTATAGCAAATGGCTAACTAAGA
CAATCAACAAATATGGAAG------------------GTAAAAGTAGTTTTAACGGATG---------------------
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>chr2B_996
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-----------------TAGCCATGGCTAGGGTGCTGGAGCCTCTCGTCGTTGGAAAGGTCATCGGGGAGGTCATCGACA
ACTTTAACCCCACAGTGAAGATGACGGTGACCTACAGCTCCAACAAGCAGGTGTTCAATGGCCACGAGTTCTTCCCGTCG
GCGGTCGTGTCCAAGCCACGCATTGAGGTCCAGGGCGGCGACATGAGATCCTTCTTCACTCTGGTTTGCCCCTCCTCTCC
TCTCCTCTCCGGCCATCTCATCTGTACACA--AAGCTAGCTAGTGTAACATCCAGCTGATAACTGGGTGTTGTC---GCT
CTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTGAGGGAGCATCTCCACTGGTAATTA--CTA
ACCCAAGCTAGTTTACAGTACTCGAGCAATCAAAAAGCCTGATCATGACTATAAAGA-----------------------
-----------------CCAATAAGCTCAGCATAACATGGAAAAATCTCTATAACGTGAAAGACATACATATCAGTCCAA
GTGAGCTACATGTTTAAGACCAAATTAATTTATCTGGTGATCAATTAGGAGCTTTCCTATGGACATAAAACTTGACAGTT
TTTGTTTAGTGAATATAAACAGT--CAGATTTATATGACCAGCTATGCATAAAAACATGCTTGATCAGATTCTGACT---
--------TGTGTATGCAGGATCGTCAATGATATTCCTGGCACCACAGATGCTTCTTTTGGTAAGTCCTTTTCATGCATG
ACTTGCTTTAGCTTTTGCTGATTGGCCCCATCCTTAA-TTTCTCTGAATAAACACATG-------AATGCATGCAGGAAG
GGAGGTGGTGAGCTACGAGAGCCCCAAGCCCAACATTGGCATTCACAGGTTCACCTTCGTGCTGTTCCAACAGAAGAAGC
GGCAGTCCATGAACC------CTCCCTCCACCAGGGACTACTTCAACACGCGCCGCTTCGCTGACGAGAACGACCTTGGC
CTCCCGGTCGCTGCCGTCTACTTCAACGCGCAGCGGGAGACAGCGGCACGCCGCCGCTGA--------------------
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>chrUn_996
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-----------------TAGCCATGGCTAGGGTGCTGGAGCCTCTCGTCGTTGGAAAGGTCATCGGGGAGGTCATCGACA
ACTTCAACCCCACAGTGAAGATGACGGTGACCTACAGCTCCAACAAGCAGGTGTTCAACGGCCACGAGTTCTTCCCGTCG
GCAGTCGTGTCCAAGCCACGCATTGAGGTCCAGGGCGGCGACATGAGATCCTTCTTCACTCTGGTTTGCGCCTCCTCTCC
TCT-----CCGGCTATCTCATCTGTACACA--AAGCTAGCTAGTGTAACATCCAGCTGATAACTGAGTGTTGTC---GCT
CTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTTAGGGAGCATCTCCACTGGTAATTA--CTA
GCCCAAACTAGTTTACAGTACTCGAGCAATCGAAAGCCTAA-C---GACTATAAAGA-----------------------
-----------------CCAATAAGCTCAGCACAACATGGAAAAATCTCTATAACGTGAAAGACATACATATCAGTCCAA
GTGAGCTACATGTTTAAGACCAAATTAATTTAGCTGGTGATCAATTAGGTTCTTTCCTATGGACATAAAACTTATCAGTT
TTTGTTTAGTGAATATAAATGGT--CAGATTTATATGATCAGCTATGCATAAAAACATGCTTGATCAGATTGTGACT---
--------TGTGTATGCAGGATCGTCAGTGATATTCCTGGCACCACAGATGCTTCTTTTGGTAAGTCCTTTTCATGCATG
ACTTGCTTTATCTTTTGCTGATTGGTCCCATCCTTAA-TTTCTCTGAAAAAACACATG-------AATGCATGCAGGAAG
GGAGGTGGTGAGCTACGAGAGCCCCAAGCCCAACATTGGCATTCACAGGTTCACCTTCGTGCTGTTCCAACAGAAGAAGC
GGCAGGCCATGAACC------CTCCCTCCACCAGGGACTACTTCAACACGCGCCGCTTCGCCAACGAGAACGACCTTGGC
CTCCCGGTGGCTGCCGTCTACTTCAACGCGCAGCGGGAGACAGCGGCACGCCGCCGCTGA--------------------
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>chr2D_996
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-----------------TAGCCATGGCTAGGGTGCTGGAGCCTCTCATCATTGGAAAGGTCATCGGGGAGGTCATCGACA
ACTTCAACCCAACAGTGAAGATGACGGTGACCTACAGCTCCAACAAGCAGGTGTTCAACGGCCACGAGTTCTTCCCGTCG
GCGGTCGTGTCCAAGCCACGCATTGAAGTCCAGGGTGGGGACATGAGATCCTTCTTCACTCTGGTTTGCGCCTCCTA---
--TCCTCTCCGGCCATCTCATCTGTACACA--AAGCTAGCTAGTGTAACATCCAGCTGATAAATGAGTGTTGTC---GCT
CTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTTAGGGAGCATCTCCACTGGTAATTA--CTA
ACCCAAACTAGTTTACAGTACTCGAGCAATCGAAAGCCTAA-C---GACTATAAAGA-----------------------
-----------------CCAATAAGCTCAGCACAACATGGAAAAATCTCTATAACGTGAAAGACATACATATCAGTCCAA
GTGAGCTACATGTTTAAGACCAAATTAATTTAGCTGGTGATCAATTAGGTTCTTTCCTATGGACATAAAACTTATCAGTT
TTTGTTTAGTGAATATAAATGGT--CAGATTTATATGATCAGCTATGCATAAAAACATGCTTGATCAGATTATGACT---
--------TGTGCATGCAGGATCGTCAGTGATATTCCTGGCACCACAGATGCTTCTTTTGGTAAGTCCTTTTCATGCATG
AC-TGCTTTATCTTTTGCTGATTGGTCCCATCCTTAA-TTTCCCTGAATAAACACATG-------AATGCATGCAGGAAG
GGAGGTGGTGAGCTACGAGAGCCCCAAGCCCAACATTGGCATTCACAGGTTCACCTTCGTGCTGTTCCAACAGAAGAAGC
GGCAGGCCATGAACC------CTCCCTCCACCAGGGACTACTTCAACACACGCCGCTTCGCTGACGAGAACGACCTTGGC
CTCCCGGTCGCTGCCGTCTACTTCAACGCGCAGCGGGAGACAGCGGCACGCCGCCGCTGACGGAAACAATCAGCCCACCC
CTTCTTCTCTTGCATGCATGGCGCATGCAACAAGCCTATGGATCAACCTATAGCTACTATTAGCTACC-----ATCTACG
TATATCTCCACTCAAATAAGAGTTTGCTTGTGAGCGTCTTGTGTGTGTTGTTTCCAGTAGTCTTTCTACTGTTCAGTTTT
TTCTTCGGTCAATTTAGT----------TACTAGTTGATCTGTGAACCAGTGTACGTGCAACCTACATCTACCACTAGTG
TGAATTTGATTCAGCTCCTATTTGTGGAGACGAAGGTTATATGCGTCCACGATGCAGTGTGCTGGCAACACAGTTGGGGG
CTGAGAGGCCGATGCATACTAGTGTTGACTGGGACTTTGGAAGCAGATTGA----TAGCT----GAAGACCGTCGACATG
TCTGGTAGTGGAAGGAGGAAAAG-------------ACAATAGC--CATGGCCCAGCCACTAGTACTCCCAGTAACCTAC
TATTTTGTCATGTGCGTGCATGCATGTGTCGCTGCTAGCTCACTGCAGCCTATAGCTTGCAGTGTACCAGCTTGTACCCG
ATGCAGTAAGCCTGCTATGTAGGTTGTGACCATTATCTCTCCATCTGCTCCGACCTTTTCTGTATGACAAGACATGCATT
GCTATGTATATGCCT----CGATTGTGTGTAATATGT-------------------------TAGGTCTTGACGTATCTA
CTGTGTGTGGGCGATTTTATAATG-------TTAATATGGCTGCTGATGA-------GAAGAGGCATCAGTTCTTGGCCC
CCCTTTCCCCATCATTTGGGTGT-----CCCTTTTGGTCGATTTGGCAATATTAGATCATTAGCATATGCGCCTAAG---
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-----CCTTAATTAAGTTTCTCGTACTTTCTGGAT---ATGCCTAGCTAGTT----TATACATGAAAAGGTAATCTTAAT
TTTATTG-GCCATAATATCTAACATGTACAACACGGTTCATATATACAAGCATACCACAATGGT-----------TACGA
CAATCAACAAAGATGGACAAAAGTGGTAGCACGGAACGTACAAGTAGTTATAACGGATGAATCAATTACGCAATGGAGAT
TGGAGTGGTTTACATATATCCAACATATCATT------------------------------------------------
-----------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS----------------------------------------------------S-------------
--------------------------------------------------------------------------------
----------------------S--------------S---------------S-------------------S------
-----------------S------SSSS------S-----S-SS-------------------S-------SSS-----S
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
S---------------------------------------------------------------S---------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S----S-----S-----------SSSSSS-------------------------------------------------
--------S-S--------------------SSSS---------------------------------------------
--S------------------------------------------------------------S----------------
------S-----S-------------------------------------------------------------------
----------S-S-------------------------------------------------------------------
--------------------S-----------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S-----S----------------S----
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
---------------S---S------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
------------S-------------------------------------------S-----------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
---------------SSSS-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--S--------------------------------------------------------S--------------------
------------------------------------------------------------S-------------------
---------------------------------------------S-----------S------------------S---
-----------
>forward_53
---------------------------------TCTTTGCCCTCATCCCCCTA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------
>reverse_3253
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------ATTCCTGTGGGCATCAAACCT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>forward_251
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GTAGCAAAC
ACGCCGAACAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------
>reverse_3567
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------CGGTTCGTCTTCGTGCTGTT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>forward_252
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TAGCAAAC
ACGCCGAACAGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>reverse_3944
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GCTCCTACTAGTCAACCTGTGA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
