>input_sequence_64914
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------------------------------------------------------------ATGCACAAGCGTTCCAAATC
CTGCGAGCCGTCCAGGAACGAGCAGCGCGGCGGCGTCCATGGGGCCACGGCCTCCGACGACTCCATCACGGGCAAGGTGG
CGTCGTCGTCCTCGGCGACGGCGCAGTGCTCCACGATGACGGTGTACCTCGTCAGGATCAACGGCACCGAGCACCTCGTC
ACCGCCGTCTGGAACAAGAACATCATCAACCAGTCCTTCACCATCACCATCGATCGCCACGGCGACGGCACCGGCAGCGG
TGGCGGCGACGACGGGGCGCTCAGCCTCAAGGTGGAGCTGAAGCCGTGGCCGTTCTGGAGCAAGAAGGGCCTCAAGAGCT
TCTTCCTCGACGGCCACCGCCTGGACGTCTTCTGGGACCTCCGGTCGGCCAAGTTCCCGGCGAGCAGCCCGGAGCCGGCC
AGCGGCTACTTCGTCGCGCTGGTGAGCCAGGAGCAGGTCGTGCTCACGCTCGGCGACCTCAAGAAGGACGCGTACAAGCG
GAGCAAGTGCCGGCCGTCGCTGGAGGACGCCGTGCCGTTGTGCCGCCGGGAGACCGTCTTCGGCAGGCGCAGCTTCGTGG
CGCGGGGGTGGCTCGACACCAGCAGGAAAGATCACGACATTGTCATCGAGGCCTCGCTAGCCGGGCCAAGGGAACCGGAA
ATGGCGATCACGGTGGACGGCCGCGCCCTGGTGCAGGTCAAGAACCTCCAGTGGAAGTTCCGGGGCAACGAGACGGTGCT
CGTCGACCAGTCGCCGGTGCAGGTGCTCTGGGACGTGCACGACTGGATCTTCGCCGGCCCGGGTTCGCAGGCGGTCTTCG
CCTTCAAGCCGGGTGCTCCGCCGGAGGTCAACAGCGACGAGGCCGGGTTGGAGAGCGGGAGTGGCATTCCCGGCGACCCG
GGGGATTACAGCTTCTTTCTTCATGCATGGAAGACGGACTGA--------------------------------------
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>chr6D_1_TraesCS6D01G150500
CACATTCAAGATACTGGGCCGGCATCACATCTTAAAATTGGCA--AGTCACCATAGGCGACTCTATAGTTGACGGGAACG
TCTTCTTTCACATAACGAAAAATCAAAAAAATAAGAGCACCAATGCAAACCCTGGTGGAGGGCTAGTTCCGTCACAAAGA
ACCTAACCCATGAAGATACGATTTTAGCATGATTTATCACGATGCCAAACAATCACATACACTACTCTATGTTTTCTGTT
TTTT-------GCAGGGAACACTATGTTTTGTTGTTGGCGTCATGGTGCAGAAGAAGATTGTTCCCGTTTCGAAAAAAGA
AGAAGATTGTTCAACTTCATACCACTTCCCAAATGACACTCACAGAAGAAGGGGCTCTCACTCCCTCTGCATGGCTACAT
GGGCACCGACCATTTCTTAGCTCGTGTTCTCTCCCTGTTCTATTTTCATGGCGCATCCAGTGCAT-----ACCACCACCA
CCACATAAATAGTGCCCAGCTGACAACGACGCGCGATCGTTGGCCGTCAAAATCTTTTTGGGCAAAACCGTCCAATTATT
CTTCGTTCCCGTCAACCCCCTTTCTCCATAGCCTCCGCCCAAGCCGGAGTTTC--CATTTT-CCTCCCACGATCGATCAA
ATTCGTGTTCTCGAGACCAGATAGGCGCAGGCATCCGGCTGCGAACGCCAAGCCACGTACGTACATTTTTGTT-TTGTTT
TGTTCGATTTACGATGCCCTTGTCGCTCTTGCATGCTGCCCATAAAAATCAATCGCCGAATTTT-TGGTACTATTTCGTT
GTCCCCTTGATTGTTATGTTTTCTATATTTGTTTAATTTGGCATCCCACACGTACATGCAGCCCATGACGATCGAGCATG
GCGGAGCCTCCTTCTTCTTGATCGATCGCCATTGCTGTTGACGCGACAAGCGGCGGGTTCCACGCCGATGTGTTTGCTCT
CGTTGTAGCTAGCATACATAGGGAGAGGGGGC-CGATCTGATCTGATCTGTTTCGGCGAGATGCACAAGCGTTCCAAATC
CTGCGAGCCGTCCAGGAACGAGCAGCGCGGCGGCGTCCATGGGGCCACGGCCTCCGACGACTCCATCACGGGCAAGGTGG
CGTCGTCGTCCTCGGCGACGGCGCAGTGCTCCACGATGACGGTGTACCTCGTCAGGATCAACGGCACCGAGCACCTCGTC
ACCGCCGTCTGGAACAAGAACATCATCAACCAGTCCTTCACCATCACCATCGATCGCCACGGCGACGGCACCGGCAGCGG
TGGCGGCGACGACGGGGCGCTCAGCCTCAAGGTGGAGCTGAAGCCGTGGCCGTTCTGGAGCAAGAAGGGCCTCAAGAGCT
TCTTCCTCGACGGCCACCGCCTGGACGTCTTCTGGGACCTCCGGTCGGCCAAGTTCCCGGCGAGCAGCCCGGAGCCGGCC
AGCGGCTACTTCGTCGCGCTGGTGAGCCAGGAGCAGGTCGTGCTCACGCTCGGCGACCTCAAGAAGGACGCGTACAAGCG
GAGCAAGTGCCGGCCGTCGCTGGAGGACGCCGTGCCGTTGTGCCGCCGGGAGACCGTCTTCGGCAGGCGCAGCTTCGTGG
CGCGGGGGTGGCTCGACACCAGCAGGAAAGATCACGACATTGTCATCGAGGCCTCGCTAGCCGGGCCAAGGGAACCGGAA
ATGGCGATCACGGTGGACGGCCGCGCCCTGGTGCAGGTCAAGAACCTCCAGTGGAAGTTCCGGGGCAACGAGACGGTGCT
CGTCGACCAGTCGCCGGTGCAGGTGCTCTGGGACGTGCACGACTGGATCTTCGCCGGCCCGGGTTCGCAGGCGGTCTTCG
CCTTCAAGCCGGGTGCTCCGCCGGAGGTCAACAGCGACGAGGCCGGGTTGGAGAGCGGGAGTGGCATTCCCGGCGACCCG
GGGGATTACAGCTTCTTTCTTCATGCATGGAAGACGGACTGAGGCTGGGACATTCATCTTCTTTTACTTTCATGTACGGG
CGAAACGGATTCGTTTATATGAAACT-GATAGCTTATTCGAAAGGAACTTCAAATCACTAGGCTGAATGAGGATATGCTA
TAAGAAACTTCCTGGTAGTTTTCAA-GCAAAGCAAAACAGGACGTGACCTATATGGATCATTTACTTCTAGTTACAGGTT
CGCTATAAAAATTGCAAGGCATTTCAAATCAAACACCAAAAGGACGTGATTTAGAATGATCAGGAATGTTTGGTAAAGAA
AATTGGCATCCTC---ACAGCATAATTTGCCATCTTGGTTGTTCGATTTGCCATGCTCAAAAATCTGGCCTTCGATCTGT
AGTAAAATCCTAAATGATTCACAATACATACATCCATGACAAACAAAAGGCATCAGCATCACATTCATAAAAC-GGCGTC
TGACATTTC-TTCACCCAGTTCCAGTATCAACAG-TGTTCCATCAGGAA--AGATATGCGATACTGAAAGAAAGTCTTAT
TCTAGAACGCCAACGTAGCAACTAAATATCTAGTTCGCATCTCGCTTTCGTTACCTGTCACAAGTAAACCATTTCCTCCA
AAAGTATAGAGATCCTCAGACCTGGAATGCTCCATCATGCTAACAAAATCAGAAGAAAGAAATAAGGATTGCAGTGTTCA
GAATTTGATCCTTCACTCCATCACAGCAACACCACCAGCTGCCTTGATCTTTGCGATGATTGCTTCCGCTTCCTCCTTCG
TGAGTGACTGCTTCAGAATAACAGGGGCCTTCTCCACCAACTCCTTCGCATCCTTCAGCCCCAGATCGGTAAATGTTCTG
ATCTCCTTGATAATCTTGATCTTTGCAGCAGCCTCAAATTTCTCCAACTTGACATCGAATACTAGCTTCTCAGCCTTTTT
CTCTTCAGACTTTGCGGCGCCAGCCCCTGCACCACCTTGAGAACCCATACTAAAACCCTGGCCAGAAATTGCCTGTGGTG
CTGGCTGGTTCA
>chr6A_1
CACCTTCAATACACTGGGCCGGCATCACATCTGGAGATTGACAAGAGTCACCACAGGCGACTCCATAGTTAATGGAAACG
TCTTCTCCCACACAACGAAAAATCAAAAAAATACGAGCACCAATGCAAAACCC--TGGTGGGCTGGTTCCATCACAAAGA
ACCTAACCCATGAAGATACGGTTTTGGCATGCTCTCTCACGATGCCAAACAATCACATACACTACTCTATGCTTTCTGTT
TTTTTGTTGTTGCAGGGAACACTATGTTTTGTTGTTGGCATCATGGTGCAGAAAAAGATTGTCCCCGTTTCGAAAAAAGA
AGAAGATTGTTCAACTCCATACCACTTCCCAAATGACACTCACAGAAGAAGGGGCTCTCACTCCCTCTGCATGGCTACAT
GGGCACCGACCATTTCTTAGCTCGTGTTCTCTCCCTGTTCTATTTTCATGGCGCGTCCAGTGCATATACCACCACCACCA
CCACATAAATAGTGCCCAGCTGACAACGACGCGCGATCGTTGGCCGTCAAAATCTTTTTTGGCAAAACCGTCCAATTATT
CTTCGTTCCCGTCAACCCCCTTTCTCCATAGCCTCCGCCCAAGCCGGAGTTTCTCCATTTT-CCTCCCACGATTGATCAA
TTTCGTGTTCTCGAGACCAGATAGGCGCCCGCATCCGACTGCGAACGCCAAGCCACGTACGTGCATTTTTGTT-TTGTTT
TGTTCGATTTACGATGCCCTTGTCGCTCTTGCATGCTGCCCGTAAAAATCAATCGCCGAATTTTTTGGTACTATTTCGTT
GTCCGCTTGATTGTTATATTTTCTATATTTGTTTAATTTGGCATCCCACACGTACATGCAGCCCATGACGATCGAGCATG
GCGGAGCCTCCTTCTTCTTGATCGATCGCCATTGCTGTTGACGCGACAAGCGGCGCGTTCCACGCCGATGTGTTTCCTCT
TGTCCTAGCTAGCATA----GGGAGAGGGGGC-CGATCTGATCTGATCTGTTTCGGCGAGATGCACAAGCGTTCCAAATC
CTGCGAGCCGTCCAGGAACGAGCAGCGCGGCGGCGTCCATGGGCCCACGGCCTCCGACGACTCGATCACGGGCAAGGTGG
CGTCGTCCTCCTCGGCGACGGTGCAGTGCTCCACGATGACGGTGTACCTTGTCAGGATCAACGGCACCGAGCACCTCGTC
ACCGCCGTCTGGAACAAGAACATCATCAACCAGTCCTTCACCATCACCATCGATCGCCACGGCGACGGCACCGGCAGCGG
CAGCGGCGACGACGGGACGCTCAGCCTCAAGGTGGAGCTGAAGCCGTGGCCGTTCTGGAGCAAGAAGGGCCTCAAGAGCT
TCTTCCTCGACGGCCACCGCCTGGACGTCTTCTGGGACCTCCGGTCGGCCAAGTTCCCGGCGAGCAGCCCGGAGCCGGCC
AGCGGGTACTTCGTCGCGCTGGTGAGCCAGGAGCAGGTCGTGCTCACGCTCGGCGACCTCAAGAAGGACGCCTACAAGCG
GAGCAAGTGCCGGCCGTCGCTGGAGGACGCCGTGCCGTTGTGCCGCCGGGAGACCGTCTTCGGCAGGCGCAGCTTCGTGG
CGCGGGCGTGGCTCGACGCCAGCAGGAAGGATCGCGACATTGTCATCGAGGTCTCGCTAGCCGGGCCAAGGGAACCGGAA
ATGGCGATCACGGTGGACGGCCGCGCCCTGGTGCAGGTCAAGAACCTTCAGTGGAAGTTCCGGGGCAACGAGACGGTGCT
CGTCGACCAGTCGCCGGTGCAGGTGCTCTGGGATGTGCACGACTGGATCTTCGCCGGCCCGGGCTCGCAGGCAGTCTTCG
CCTTCAAGCCAGGTGCTCCGCCGGAGGTCGACAGCGACGAGGCCGGGTTGGAGAGCGGGAGTGGCATTCCGGGCGACCCG
GCGGATTACAGCTTCTTTCTTCATGCATGGAAGACGGACTGAGGCTGGGACATTCATCTTCTTTTACTTTCATGTACTGC
CGAAACGGATTCGTTTATATGAAAACGGATAGCTTATTCAAAAGGAACTTCAAATCAGTAGGCTGGATGAGGATATGCTA
AGAATATTTTCCTGGTAAGTATTGGGGCAAAGCAGAACAGGATGTGACATATATGGAACATTTCCTTGTAGCTACAGGTT
CGCTATAAAAATCGCAAGGCGTTTCAAATCAAACACCAAAAGGCCGTGATTTA---------------------------
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-----------AAATGATTCACAATACATACCACCGACACAAACAAAAGGTATCATCATCACATTCATAAAAATGGTGTC
AGACATTTCTTCCGCCCAGTTGTAGTATCAACAGGTGATCCGTCAAGAAAGAGATATGTGATACTGAAAGAAAGTCTTAT
TCTAGAACACCAACGTAGCAACTAAATATCTAGTTCGCATCTCGCTTCCGTTACCTGTCACAGAATAT------------
---------AGATCCTCTGACATCGAATGCTCCATCATGCTAACAAAATCAGAA-AGAGAAAAAAGATTTGTGATGTCCA
GAATCTGATTCTTCACTCCATCACAGCAACACCACCAGCTGCCTTGATCTTTGCGATGATCGCTTCCGCTTCCTCCTTCG
TGAGTGACTGCTTTAGAATGACAGGGGCCTTCTCCACCAGCTCCTTTGCATCCTTCAGCCCCAAATCAGTAAACGTTCTG
ATCTCCTTGATAATCTTAATCTTTGCAGCAGCGTCAAATTTCTCCAACTTGACATCGAATACTAACTTCTCAGCCTTTTT
CTCTTCAGACTTCGCGGCGCCAGCACCTGCACCACCTTGAGAACCCATACTAAAACCCTGGCCAGAAATTGCCTGTGGTG
CTGGCTGGTTCA
>chr6B_162
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---TAACCCATGAAGATACGATTTTGGCATCATCTATCACGACGCCAAACAATCACATACAATACTTTATGTTTTCTGTT
TATTGCAGGGA------AACACTATGTTTTGTTGTTGGCCTCATGGTGCAGAAGAAGATTGTTCCCGTTTCGAGAAC---
AGAAGATTGTTCAACTCCATACCACTTCCCAAATGACACTCACAGAAGAAGGGGCTCTCACTCCCTCTGCATGGCTACAT
GGGCACCGACCATTTCTTAGCTCGTGTTCTCTCCCTGTTCTATTTTCATGGCGCACCTAGTGCAT-----ACCACCACCA
CCATATAAATAGTGCCCAGCTGACAACGACGCGCGATCGTTGGCCGTCAAAATCTTTTTGGGCAAAACCGTCCAATTATT
CTTCGTTCCCGTCAACCCCCTTTCTCCATCGCCTCCGCCCAAGCCGGAGTTTC--CATTTTTCCTCGCACGATTGA----
-----TGTTCTCGAGACCAGATAGGTGCACGCATCCGACTGCAAACGCCAAGGCACGTACGAACATTTCTGTTCTTGTGT
TGTTCGATTTACGATGCCCTTATCGCTCTTGCATGCAGCCCATAAGAATCAATCGCCGATTTTTGG-----TATTTCGTT
GTCCCCTTGATTATTATTATTTCTCTTTGTTTATAATTTGGTCTTTGACGAT--CATGCAGCCCATGACGATCGAGCATG
GCGGAGCTTACTTCTTCTTGATCGACCGCCATTGCTGTTGACGCGACAAGCGGCGCGTTCCACGCCGATGTGTTTCCTCT
TGTCCTAGCTAGCGTA----GGGAGAGGGGGCGCGATCTGATCTGATCTGTTTCGGCGAGATGCACAAGCGTTCCAAATC
CTGCGAGCCGTCCAGGAACGAGCAGCGCGGCGGCGTCCATGGGGCCACGGCCTCCGACGACTCGATCACGGGAAAGGTGG
CGTCGTCGTCCTCGGCGACGGCGCAGTGCTCCACGATGACGGTGTACCTCGTCAGGATCAACGGCACCGAGCACCTCGTC
ACCGCCGTCTGGAACAAGAACATCATCAACCAGTCCTTCACCATCACTATCGATCGCCACGGCGACGGCGCCGGCGGCGG
GGC---CGACGACGGAACGCTCAGCCTCAAGGTGGAGCTGAAGCCGTGGCCGTTCTGGAGCAAGAAGGGTCTCAAGAGCT
TCTTCCTCGACGGCCACCGCCTGGACATCTTCTGGGACCTCCGGTCGGCCAAGTTCCCGGCGAGCAGCCCGGAGCCGGCT
AGCGGCTACTTCGTCGCGCTGGTGAGCCAGGAGCAGGTGGTGCTCACGCTCGGCGACCTCAAGAAGGACGCGTACAAGCG
GAGCAAGTGCCGGCCGTCGCTGGAGGACGCCGTGCCGTTGTGCCGCCGGGAGACCGTCTTCGGCAGGCGAAGCTTCGTGG
CGCGGGCGTGGCTCGACAACAGCAGGAAAGATCACGACATTGTCATCGAGGCCTCGCTAGCCGGGCCAAGGGAACCAGAA
ATGGCGATCACGGTGGACGGCCGCGCCCTGGTGCAGGTCAAGAACCTTCAGTGGAAGTTCCGGGGCAACCAGACGGTGCT
CGTCGACCAGTCGCCGGTGCAGGTGCTCTGGGACGTGCACGACTGGATCTTCGCCGGCCCGGGCTCCCAGGCGGTCTTCG
CCTTCAAGCCGGGTGCTCCGCCGGAGGTCGACAGCGACGAGGCCGGGTTGGAGAGCGGGAGAGGCATTCCCGGTGACCCG
GCGGATTACAGCTTCTTTCTTCATGCATGGAAGACGGACTGAGGCTGGGACATTCATCTTCTTTTACTTTCATGTACGGG
CGAAATGGATTCGTTTATATGAAACT-GATAGCTTATTCAAAAGGAACTTCAATTCACTAGGCTGAATGAGGATATGCTA
TAAGAAACTTCCTGGTAGTTTTCAA-GCAAAGCAAAACAGGACGTGACCTATATGGATCATTTACTTCTAATTACAGGTT
CGGCAAATAAATTGCAAGCCGTTTCAAATCAAACACCAAAAGGACGTGATTTAAAATGATCGGGAATGTTTGGCAAAGAA
AATTGACATCCTCGCAACAACATAATTTGCCATCTTGGGCATTCCATTTGCCATGCTAAAAAATTTGGCATTTGATCTGT
AGCAAAATCCAAAATGATTCACAATACATACATCCAAGACAAACAAAAGGCATCAGCATCACATTCATAAAAAACAGCGT
CGACATTTCTTTCACCCAGTTCCAGTATCAACAG-TGTTCCGTCAGGAA--AGATATGTGATACTGAAAGAAAGTCTTAT
TCTAGAACGCCAACATAGCAACTAAATATCTAGTTCGCATCTCCCTTTCGTTACCTGTCACAAGTAAACCATTTCCTCCA
AAAGTATAGAGATTCTCAGACCTCGAATGCTCCATCATGCTAACAAAATCAGAAGAAAGAAATAAGGATTGCAATGTCTG
GAATTTGATCCTTTACTCCATCACAGCAACACCACCAGCTGCCTTGATCTTTGCGATGATTGCTTCCGCTTCCTCCTTCG
TGAGTGACTGCTTCAGAATGACAGGGGCCTTCTCCACCAGCTCCTTTGCATCCTTCAGCCCCAAATCGGTAAACGTTCTG
ATCTCCTTGATAATCTTAATCTTTGCAGCAGCCTCAAATTTCTCCAACTTGACATCAAATACCAACTTCTCAGCCTTTTT
CTCTTCAGACTTTGCGGCACCAGCCCCTGCACCACCTTGAGAACCCATACTAAAACCCTGGCCAGAAATTGCCTGTGGTG
CTGGCTGGTT--
>SNPs
---S-----S-S--------------------SS-S----S------------S---------S------S-S--S----
------SS----S--------------------S---------------S--SSS---S-----S-----S---------
-------------------------S-------S----------------------------------------------
---------------------------------------S----------------------------------------
----------------S---------------------------------------------------------------
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-------------------------------------------------------------------------S------
S----------------------------S-------S------------------------------------------
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-----------------S--------------------------------------------------------------
-------------------------------------------------------S-------------------S----
S--SS-----------SSSS------------------------------------------------------------
---------------------------------------------------------------S----------------
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S---------------S---------------------------------------------------------------
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------S-------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
---------------------------------------------------------------S----------------
-----------------------------S--------------------------------------------------
-S------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
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--------------------S--------------------------------S-------S-----------S------
-----S-------------S------------------SSS---S------------S------S----S--S-------
--S-------S-------------------------S-----------------------------------S---S---
S----------------------------------------S----------------S---------------------
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-----------------------S-------------------------------------------------S---S--
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-------------------S-------------------S------S----------------S---------S------
-----------------S----------------------------------------------S---------------
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>forward_956
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--------------------------------------------------------GTTCCACGCCGATGTGTTTG----
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>reverse_2760
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---------------------------------------ACTCCTTCGCATCCTTCAGC---------------------
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