>input_sequence_64892
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGCGTCCAACACCGCACCTGCACCCGC---------CG
CCGACGACGAGCTGATGCACGAGTTCGGCCCGCTCCTCCGAGTCTACAAGAGCGGCCGCATCGAGCGCCCCCTCGTGCTC
CCGCCCGTCGCACCAGGGCCCGACCCCTCCACCGGCGTCCAGTCCAAGGACGTCGACCTCGGCGCCTACTCCGCCCGCCT
CTACCTGCCCCCATCCGCCGCGGCCGCCACGGCGGCGAAGCTCCCCGTCATCGTCTACGTCCACGGCGGCGGCTTCGTGG
CCGAGTCGGCAAAGTCCCCCAACTACCACCGCTTCCTCAACGATCTGTCCTCCGCCTGCCCGGCCCTCGGCGTCTCCCTC
GACTACCGCCTCGCGCCGGAGCACCCGCTCCCGGCGGCCTACGACGACTGCCTCGAC-GCGCTCCGCTGGGTGCTCTCCG
CGGCCGACCCCTGGGTCGCGGCGCACG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCGAC
CTCGACCGCGTCTTCGTGGCCGGCGACAGCGCCGGCGCCAACATCTGCCACCACGTCGCCATCCAGCCGGGCGCCGCGCG
CCTCGGGGGCGCGGTGCTGATCCACCCCTGGTTCTGGGGCTCCGAGACCGTGGGGGAGGAGACACGCGACCCCGCGGCGC
GCGCCCGGGGCGCGGGGCTCTGGATGTTCGCGTGCCCGGGCACCACCGGCATGGACGACCCGCGGATGAACCCCATGGCG
CCCGGCGCGCCGGGGCTGGGGGCGCTGGCGTGCGAGCGGGTGATGGTGTGCACGGCGGAGGGCGACTTCCTCAGGTGGCG
CGGCCGCGCGTACGCGGAGGCGCTGGCCGCCGCCGGCA------------AGGGAGTGGAAATGCTGGAGACGGACGGGG
AGGGCCACGTCTTCTACCTCTTCAAGCCCGACTGCGACAAGGCCAAGGAGATGCTCGACAGGATCGTGGCCTTCGTTAAC
GCGGCAGCTTGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G124000
CTCCCAGCTTCCGCAAATCTACGAGCGGAGCTAGCCCGAACGGCTCAGCTCCAAGAAGCTGGCTTCCTGAAGCAGAGCGG
CACGCACGTACAAAAACTCGGAGCGACGGTTTCGGTGATCTCAGAAATCGAGAATCTGGAGTTGGCGTTATTTACGAGCA
GCTGCCACCGCAAAGTGAATCGAAGGGGTCACGTACCGGTTCGCTACTTCTATTTCCCCTGTTCTCGTGTGTTCGCCTGG
GCCCTAAGGCCACCTTACCTGTTGAGCCGGCTGGGCTCCGGCCCGCCAGCCAGGTTGGCCTGCTAACACGTACGAGAAGC
TGGAGAGAGGAGCCGAACGAATTTCTCAGCGCTACGCTAGCGCTCGCGCCGGAAGCTAGGGATCGAAAAACGAAGCTGGA
TTTGAGGATTTATTGGAGTTGGGGAGCTGCCGAACAGGCCCGAAGTCTTCCCTGCCAATCCAGCGGTTCGTGACGGTTTT
CGTCATAAGGTATTCAAAATCAAAAGGTTTTCCACGCAATGACGTGCGTATCATGTGTGGCCGCTCAACGGTCTGTGACG
GTTTTCGTCCGACTTTCGGTCTGCTTCGGGGGGAAAAAGAGGCGGCGACGACGACCTCCTTCCCTTCCCGTCGGCAACCT
AAGCGGTGGACTGGAAGAGCTGATCGGTAGCTGATCCGGCCAGTACATCATTTCGGTGTGAATAGTAGAACAAGTAGAGA
GTGAGTGTAAACGCGCCGAACGGTCAAGCATTTGTCGCAAGCCAGCCAGACCGGCGGAAGGGAAGCGTTTGTCGGTTCAA
CCGCACAACATCAGTCCACCGCCACGCCGTTCGCGCGATGCCTTTTCCCTTCCGGAGATCCCAAGGCACAAATACGTACA
CCGCGATCGCGATGTCTATTTCATCCGGAGATCCCACCCAGGAAACAATTACACACAGACACAGCAGCCGGCTCCCCTCA
CCCCCCGAGCATTCGCCACTGAGAGAGAGAGAGCGCGCGCATGGCGTCCAACACCGCACCTGCACCCGC---------CG
CCGACGACGAGCTGATGCACGAGTTCGGCCCGCTCCTCCGAGTCTACAAGAGCGGCCGCATCGAGCGCCCCCTCGTGCTC
CCGCCCGTCGCACCAGGGCCCGACCCCTCCACCGGCGTCCAGTCCAAGGACGTCGACCTCGGCGCCTACTCCGCCCGCCT
CTACCTGCCCCCATCCGCCGCGGCCGCCACGGCGGCGAAGCTCCCCGTCATCGTCTACGTCCACGGCGGCGGCTTCGTGG
CCGAGTCGGCAAAGTCCCCCAACTACCACCGCTTCCTCAACGATCTGTCCTCCGCCTGCCCGGCCCTCGGCGTCTCCCTC
GACTACCGCCTCGCGCCGGAGCACCCGCTCCCGGCGGCCTACGACGACTGCCTCGAC-GCGCTCCGCTGGGTGCTCTCCG
CGGCCGACCCCTGGGTCGCGGCGCACG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCGAC
CTCGACCGCGTCTTCGTGGCCGGCGACAGCGCCGGCGCCAACATCTGCCACCACGTCGCCATCCAGCCGGGCGCCGCGCG
CCTCGGGGGCGCGGTGCTGATCCACCCCTGGTTCTGGGGCTCCGAGACCGTGGGGGAGGAGACACGCGACCCCGCGGCGC
GCGCCCGGGGCGCGGGGCTCTGGATGTTCGCGTGCCCGGGCACCACCGGCATGGACGACCCGCGGATGAACCCCATGGCG
CCCGGCGCGCCGGGGCTGGGGGCGCTGGCGTGCGAGCGGGTGATGGTGTGCACGGCGGAGGGCGACTTCCTCAGGTGGCG
CGGCCGCGCGTACGCGGAGGCGCTGGCCGCCGCCGGCA------------AGGGAGTGGAAATGCTGGAGACGGACGGGG
AGGGCCACGTCTTCTACCTCTTCAAGCCCGACTGCGACAAGGCCAAGGAGATGCTCGACAGGATCGTGGCCTTCGTTAAC
GCGGCAGCTTGATGCTCTCCTCACCGGAATTGCAACTCGGTGAATTTTAGCCATGGC-AATCCTAGACGTGTTTGTGCTC
CGTTCTTGGATTGTGACGATGAAATAAATTGGATTTACTGGAGCAACTCCAATCATCCTCCTGCTTCCTCACCTACCTGG
CTACATCTCAATTTTAGGGGTCTTTAGCTTTACCAATTATCACCTCTGATCCTAATGAGTTTTAAATATTTTAATATGAA
CTACTTACATACTGAAACGAGTGAACGAACAGACTAAAACAAGTCCATATACATATGCTTAGAAAAATAAAAACATTTTA
TAATTTGAAAACAAGAAGGTATA--TTTTATTGTATTTTCTTTTGGCGATTCGATTGTTAGTGTTTGCTGAGTGATGTGC
AATGGACTGCTTGCCTTGTGGGCTCCAATTAGATACAATTAATTTCTAGGAGCCCATACAGTTATGTTTTGCTTACCTAC
TATATGAGCCTAGGTGGTAAATGCAAGATAAATTGGATGGATAGGCCCGAGCCTTACTCGTCTGCGACACCAAAATTAGC
ATTGGAAATATAGATGTGTATCCAGAGTACC-CAAATTATTACACATCTAAATAACTCAACCATCAATC--AAACAGAAA
AAAGAGGATCAATCTTTGGTTGGTTGATTATGCGGCAATGGTATGCTAGCCCATCAAGGTTCCAAGTTAGACTTAGCACT
AGTGTTTGTATTCTTCGGAATTTTTTTCAGTCCATCCGGTAATATGCGTTTAGTGAGGGAAGACGTTCCAGTCGACTATG
AAGGTGTCTGTGCCAACTTCATTAATTTCATGATGATGTGCCGGCTTATTCTTTCCAAGGT-------------------
--GTGTTCATAGGATGAGTATATGTGTTTATCTATGTATGCGTCCTAACTGTGTTAAAAAACATTTAAAAAATCGACAAG
AATCTTCACGTAAAATCGATGACATAGGATGGCATAGGACTTAGACGTACAATACTTAACATGTGTAGATAAATGTGCT
>chr3B_683
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GTACATCATTTCGGTGTGAATAGTAGAACAAGTAGAGA
GT----GTAAACGCGTCGAACGGTCAAGCATTTGTCGCAAGCCAGCCAGACCGGCGGACGGGAAGCGTTTGTCGGTTCAA
CCGCACGCCATCAGTCCACCGCCACGCCGTTCGCGCGATGCCTTTTCCCATCCGGAGATCCCAAGGCACAGATAGTACAC
-------CGCGATGTCTATTTCATCCGGACATCCCACCCAGGAAACAAAT--ACACACGACACAA----------CCTCA
-CCCCCGAGCATTCGCCAGTGAGAGAGAGAGGGAGAGAGCATGGCGTCCAACACCGCACCCGCACCCGCACCCGCACCCG
CCGCCGACGAGCTGCTGCACGAGTTCGGCCCGCTCCTCCGAGTCTACAAGAGCGGCCGCATCGAGCGCCCCCTAGTGCTC
CCGCCCGTCGCGCCGGGGCCCGACCCCTCCACGGGTGTCCAGTCCAAGGACGTCGACCTCGGCGCCTACTCCGCCCGCCT
CTACCTGCCCCCATCCGCCGCGGCCGGCACGGCGGCGAAGCTCCCCGTCATCGTCTACGTCCACGGCGGCGGCTTCGTGG
CAGAGTCCGCGAAGTCCCCCAACTACCACCGCTTCCTCAACGACCTCACCTCCGCCTGCCCGGCCCTCGGCGTCTCCCTC
GACTACCGCCTCGCCCCGGAGCACCCGCTCCCGGCGGCCTACGACGACTGCCTCGAC-GCCCTCCGCTGGGTGCTCTCCG
CGGCCGACCCCTGGGTCGCGGCGCACG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCGAC
CTCGGCCGCGTCTTCGTGGCCGGCGACAGCGCCGGCGCCAACATCTGCCACCACGTCGCCATCCAGCCGGGCGCCGCGCG
CCTCGGGGGCGCGGTGCTGATCCACCCCTGGTTCTGGGGCTCCGAGGCCGTGGGGGAGGAAACAACCGACCCCGCGGCGC
GCTCCCGGGGCGCGGGGCTCTGGATGTTCGCGTGCCCCGGCACCAGCGGCATGGACGACCCGCGGATGAACCCCATGGCG
CCCGGCGCGCCGGGGCTGGGGGCGCTGGCGTGCGAGAGGGTCATGGTGTGCACGGCGGAGGGCGACTTCCTCAGGTGGCG
CGGCCGCGCGTACGCGGAGGCGCTGGCCGCCGCCGACA------------AGGGAGTGGAGCTGCTGGAGACGGACGGGG
AGGGCCACGTCTTCTACCTCTTCAAGCCCGACTGCGACAAGGCCAAGGAGATGCTCGACAGGATCGTCGCCTTCATTAAC
GCA---CCTTGATGCTCTCTTCACCGGA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr3A_811
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TCACTCCACCGCCACGCCGTTCGCGCGATGCCATTTCCCTTCCGGAGATCCCAAGAAACGAAACGAAAC-
-----------------------------------------GAAACAAAT--ACACAGACACACGAGCCGGCTCCCCTCA
-CCCCCGAGCATTCGCCAGTGAGAGAGAGAGGGAGA--GCATGGCGTCCAACACCGCACCTGCGCCCGC---------CG
CTGACGATGAGCTGCTGCACGAGTTCGGCCCGCTGCTCCGAGTCTACAAGAGCGGCCGCCTCGAGCGCCCCCTCGTGCTC
CCGCCCGTCGCGCCGGGGCTCGACCCCTCCACCGGTGTCCAGTCCAAGGACGTCGACCTCGGCGCCTACTCCGCCCGCCT
CTACCTGCCCCCCACCGCCGCGACCACCACC---GCGAAGCTCCCCGTCATCGTCTACGTCCACGGCGGCGGCTTCGTGG
CCGAGTCCGCAAAGTCCCCCAACTACCACCGCTTCCTCAACGACCTCGCCTCCGCCTGCCCGGCCCTCGGCGTCTCCCTC
GACTACCGCCTCGCGCCGGAGCACCCGCTCCCGGCGGCGTACGACGACTGCCTCGAC-GCGCTCCGCTGGGTGCTCTCCG
CGGCGGACCCCTGGGTGGCCGCGCACGGCTCAGGGTGGACACGGTCCGGGCCGGTCCGGTCCCTGATCGAGCCACCATTT
GGACCGGCCGCCGGCGGTCCGGACCGGACCGGACCGACCAGCCTAGCGGGCCTGTTTTCAAGGACCGGACCGGCGGCGGC
AAAGCCCGGGCCGGACCGAGCGGACCGGCCAGCCACTTCCGGCGATGACTTGGACGGGTGCAACGGCAAGGTGGGCGACG
TACGCAGGTACTGCGGCGAGGTGGGCGAGCGCCGGCGGCGAGGTGGGCGACGTGCTATGCGAACTGCACTGGGCGGCGCG
GCTGTTAGCCATTATTTTCTCTGTGCCTTGATGCTTCTTCCTTAGCAGTTTATGTATTGCATGCAAGTAATGGAGCGCCT
GCATGAGCCCACGATTTTCTCTGCGAGGGAGATGCCGTTATTAGCGGATCAAATTGGACGTGGTGTTGATCGTCAAATTG
CGCCGTGATTTTCGGATCAAATCCTTTTTCTCTCGTACATTCTATTTGGAAACGGCAGCGTGGGATTGATGGCGCGTGAT
TATAGCAAGAGGTCGGTATTAGTTTTTCATGCAATCCCATAACATTCGCCTTCCAAAACAAGTACTCTCCTAATTTGTTG
GACGTGAAAATCATGACCGAGTATTGCTCCCATGATACGAAAATCATGACAGACCGTTTCTCCCACGATCCGACTTGACT
GCGTGCGTGATGCGCGGAAACGGCTGCCATGGCACTTCGTCTGCACCACGAAAAGCGCTGCCATGGCAACAAATTCCACT
ACATGGCAGGAATTGCTGCTACGGTTGGGTCGACGCCATGGTTGAGAACACGAGATCGGCGGCAGAGCACGCACGACAGC
GATGGCGAGCGGCGGCAAGAGGCTACAGCGGAAGGGGAGGAGAGGAAGGAAGGAGAGAGGAAGCTCGGCGACACGGTGGT
TCATCCTGGGGCTGCCGGTGGCCGCGACGACGAGGAACGGTGACGGCGGTGATCGTGTTTTCTCGGTCCGCTCGGTCGGA
CCGGTTAAAGACCGGACCGGACCGAGATTTTTTCGGTCCGAATTTGGCAGACCGGACCGACCATTTTCTGTAGCGGGCCG
GGACCGAGCGGGCCAAGACCGAACGGGCCACGAGCGGGCCAGAAAGACCGCTCGCTACGTCCAGCCTGACGCACGGCGAC
CTCGCCCGCGTCTTCGTGGCGGGCGACAGCGCCGGGGCCAACATCTGCCACCACGTCGCCATCCAGCCGGGCGCCGCGCG
GCTCGGGGGCGCGGTGCTGATCCACCCCTGGTTCTGGGGCTCCGAGGCCGTGGGGGAGGAGACGACCGACCCCGCGGCGC
GCGCCCGGGGCGCGGGGCTCTGGATGTTCGCGTGCCCGGCCACCACCGGCATGGACGACCCGCGGATGAACCCCATGGCG
CCCGGCGCGCCGGGGCTGGGGGCGCTGGCGTGCGAGCGGGTGATGGTGTGCACGGCGGAGGGCGACTTCCTCAGGTGGCG
CGGCCGCGCGTACGCGGAGGCGCTGGCCGCCGCCGGCA------------AGGGGGTGGAGCTGCTGGAGACGGACGGGG
AGGGCCATGTCTTCTACCTCTTCAAGCCCGACTGCGACAAGGCCAAGGAGATGCTCGACAGGATCGTCGCCTTCGTTAAC
GCAGCACCTTGATGCTCTCCTCACCGGAGATGCAACTCGGTGAATTTTGGTTATGGCAAATCCTAGACGTGTTTGTGCTC
CGTTCTTGGATTGCGACGATGAAATAAATTGGATTTACCGGAGCAGCTCCAATCATCCTCCTGTTTCCTCACCTACCTGG
CTACATCTCAATTTTAGGGGTCTTT-GCTTTACCAATTATCACCTGATCATAATGAC-GTTTCAAATATTTTAATATGAA
CTACTTACAGACTGAAACAAGCGAACAAACACACTAAAACACATCCATATATATATGCTTA---------AAATAATTAT
AATTCGGAAACGAAGAGGGTATATATTTTATTGTATTTTCTTTTGGCGATTCGATTGTTAGTGTTTGCTGAGTGATGTGC
AATGGATTGCTTGCCTTGTGGGCTCCAATTAGATACAATTGATTTCTAGGAGCCCATACAGTTATGTTTTGCTTACCTAC
TATATGAACCTAGGTGGTAAATGCAAGATAAATTGGATGGATGGGGCCAAGCCTTACTCGTCTGCAACACCAAAATTAGC
ATTGGAAATATAGATGTATATCTAGATGTGCACAAATTATTACACATCTAAATAACTCAACCATCAAACAGAAAAAAGAA
AAGGCGGATCAACCTGTGGTTGGTTGATTATGCGGCAATGGTATGCTAGCCCATCAAGGTTC-AAGTTAGACTTAGCACT
AGTGTTCGTATTTTTCTGAATTTATTTCAGTCCATCTGGTAATATGCGTTTAGTGAGGGAAAACGTTTCAGTCGACTATT
AAGGTGTTTGTGCCAACTCCATCAATCTCAAGATGATGCGTCGGTTTAGTCTCTCAGAGGTGCTCATTTGGGTAAGATGT
GCGTGTTCATAGGATGAGTATATGTGCTTATCTATCTATGCACATGTACTGTGTT--AAAACATTAAAAATATCGACAAG
AATCTCCACGTAAAAT---------------------------------------------------------------
>chr5D_1029
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------C---------CG
ACGACAACGAGGTGGCGCACGACTACGGCC---TCGTCCGCGTCTACAAGAGCGGCCGCGTCGAGCGCCCCCTGGTGGCT
CCGCCAGCGGCGGCCGGCCTCGATCCCGCCACCGGCGTCGAGTCCAAGGACGTCCAGCTCGGCGACTACTCCGCCCGCCT
CTACCTGCCCCCG---GCCGCGTCCACGGCCACAGACAAGTTCCCTGTCATCGTCTACGTCCACGGGGGCGGCTTCGTGG
CCGAGTCCGTCGCGTCCCCCAACGGCCACCGCTTCCTCAACAGCCTCACCGCCGCCTGCCCTGCCCTCGCCGTCTCCGTC
GAGTACCGCCTCGCCCCGGAGCACCCGCTCCCCGCGGCCTACGAGGACTGCGTCGCT-GCCCTCACGTGGGTGCTCTCGG
CCGCCGACCCGTGGGTCGCCGAGCACG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCGAC
CTGGGCCGCGTCTTCGTGGCCGGGGACAGCGCCGGGGCCAACGCCTGCCACCACCTCGTCATTCAGCCGGGCGCCGTGCG
CCTCAAGGGCGCGGTGCTGATCCACCCCTGGTTCTGGGGTTCCGAGGCCGTCGGCGAGGAGACGCGCAACCCCGCGTGGC
GCGCCATGGGCGGGCGGCTGTGGGAGTTCGCGTGCCCCGGCTCGAGCGGCGTCGACGACGCGCGGATGAACCCGATGGCG
CCCGGCGCGCCGGGGCTGGAAACGCTCGCGTGCGAGAGGGTCATGGTGTGCGTCGCGGAGGGCGACTTCCTCAGGTGGCG
CGGCCGCGCGTACGCGGAGGCCGTGGCCGCGGCGAGGGGCGGCGAGGGGCAGGGCGTCGAGCTGCTGGAGACGGAGGGGG
TGGGGCACGTCTTCCACCTCTTCAAGCCCGACTGCGACAAAGCCAAGGAGATGTTCGACAGGATAGTCGCCTTCGTTAAC
GCG---CCGTGATGCTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr5B_1029
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------C---------CG
ACGACAACGAGGTGGCGCACGACTACGGCC---TCGTCCGTGTCTACAAGAGCGGCCGCGTCGAGCGGCCCCTGGTGGCT
CCGCCCGCGGCGGCCGGCCTCGATCCCGTCACCGGCGTCGAGTCCAAGGACGTCCAGCTCGGCGACTACTCCGCCCGCCT
CTACCTGCCCCCG---GCCGCGTCCGCGGCCGCAGACAAGCTCCCTGTCATCGTCTACGTCCACGGGGGCGGCTTCGTGG
CCGAGTCCGTCGCGTCCCCCAACGGCCACCGCTTCCTCAACAGCCTCACCGCCGCCTGCCCTGCCCTCGCCGTCTCCGTC
GAGTACCGCCTCGCCCCGGAGCACCCGCTCCCTGCGGCGTACGAGGACTGCGTCGCC-GCCCTCGGGTGGGTGCTCTCGG
CCGCCGACCCGTGGGTCGCCGAGCACG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCGAC
CTGGGCCGCGTCTTCGTGGCCGGGGACAGCGCCGGGGCCAACGCCTGCCACCACCTCGTCATCCAGCCGGACGCCGTGCG
CCTCAAGGGCGCGGTGCTGATCCACCCCTGGTTCTGGGGCTCCGAGGCCGTCGGCGAGGAGACGCGCAACCCCGCGTGGC
GCGCCATGGGCGGGCGGCTGTGGGAGTTCGCGTGCCCCGGCTCGACTGGCATCGACGACGCGCGGATGAACCCGATGGCG
CCCGGCGCACCTGGGCTGGAAACACTTGCGTGCGAGAGGGTCATGGTGTGCGTCGCGGAGGGCGACTTCCTCAGGTGGCG
CGGCCGCGCGTACGCGGAGTCCGTGGCCGCGGCGAGGGGCGGCGAGGGGCAGGGGGTTGAGCTGCTGGAGACGATGGGGG
AGGGGCACGTCTTCCACCTCTTCAAGCCCGACTGCGACAAAGCCAAGGAGATGTTCGACAGGATCGTCGCCTTCGTTAAC
GCG---CCGTGATGCTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr5A_1029
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------C---------CG
ACGACAACGAGGTGGCGCACGACTACGGCC---TCGTCCGCGTCTACAAGAGCGGCCGCGTCGAGCGGCCCCTGGTGGCT
CCGCCCGCGGCGGCCGGCCTCGACCCCGTCACCGGCGTCGAGTCCAAGGACGTCCAGCTCGGCGACTACTCCGCCCGCCT
CTACCTGCCCCCG---GCCGCGGCCATGGCCGCAGTCAAGCTCCCTGTCATCGTCTACGTCCACGGGGGCGGTTTCGTGG
CCGAGTCCGTCGCGTCGCCCAACGGCCACCGCTTCCTCAACAGCCTCACCGCCGCCTGCCCCGCCCGCGCTGTCTCCGTC
GAGTACCGCCTCGCCCCGGAGCACCCGCTCCCTGCGGCGTACGAGGACTGCGTCGCCCGCCCTCGGGTGGGTGCTCTCGG
CCGCCGACCCGTGGGTCGCCGAGCACG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCGAC
CTGAGCCGCGTCTTCGTGGCCGGGGACAGCGCCGGGGCCAACGCCTGCCACCACCTCCTCATCCAGCCGGACGCCGCGCG
CCTCAAGGGCGCGGTGCTGATCCACCCCTGGTTCTGGTGCTCCGAGGCCGTCGGCGAGGAGACGCGCAACCCCGCGTGGC
GCGCCATGGGCGGGCGGCTGTGGGAGTTCGCGTGCCCCGGCTCGACTGGCATCGACGACGCGCGGATGAACCCGATGGCG
CCCGGCGCGCCGGGGCTGGAAACGCTCGCGTGCGAGAGGGTCATGGTGTGCGTGGCGGAGGGCGACTTCCTCAGGTGGCG
CGGCCGCGCGTACGCGGAGGCCGTGGCCGCGGCGAGGGGCGGCCAGGGGCACGGGGTCGAGCTGCTGGAGACGATGGGGG
AGGGGCACGTCTTCCACCTCTTCAAGCCCGACTGCGACAAAGCCAAGGAGATGTTCCACAGGATCGTCGCCTTCGTTAAC
GCG---CCGTGATGCTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------
--SSSS---------S------------------------------------------S---------------------
------SS------------------------------------------------------------------SSS--S
SSSSSSS----------------------S------------------S-SS-----------SS---------------
S-----------------S------------S-S-S-S------------------------------------------
--------------S-----------------------------------------------------------------
-----------S--S-----------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-----------------------------------S--SS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------SS------------------
-------------------------------------------------------------------S------------
------S---------------------SS------------------S-SS----------------------------
-------------S------------------------S------S-----------------S----------------
-------------------------S-------------------SSSSSSSSSSSSS----S-----------------
---------S--------S--S----S----S---------SS--------S---------SSSSSSSSS---S-S--SS
S-S-SS----SS----S---------------------------------------------------------------
------S---------------------------------S---------------------------------------
-------S----------------------------------S--S--S----------------S--------------
-----------------S----S---SSSS-------------------------------------S------S-SS--
--S-S-------S--S----------------------------------------------S-----------------
------S-----S---S------S------------S------------------------S-----S-----------S
-------S----------S---S---S---S-------S-S---S---S---S--SS-----------------------
--------------------------S--------S-----SSSSSS--------SS--------S----S---------
-----S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_98
------------------------------------------------------------------------------GG
CACGCACGTACAAAAACT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_3169
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AGCCATGGCAATCCTAGACG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
