>input_sequence_64872
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------ATGTTTGTTATTTTAGATTCAGCATTTGATGAGAAGAGTGACTACCACAAGCATGTGTTGAGCATTCTGGTAAT
TCTATAAAGTAAATGTTTTTAATCTTATT---------TT-TTGTCCTCT---TTTTCTCCACTTCTGCATGATGTTCTT
TGCTGC-CCTACGCATTCTAATTTTTTAG---TTCACTGTAAATTTACAGATCCCAAATTTCAAGAGGGTTTGGAACATG
TTTGGGAGCTCGCGGAATCTTAATTGGAGAATTTGGTCTACACATTTTATTGACGTGCCTAAACAATCAAATGCGTAAGT
TCTTTTTTAATTTTTATT-TT-CTGCAATTTGATGTTCATG--TTTTT------TGTGCT--------AAATATGCT-TT
TTAGAATTATGAGGACGCAAGTTATATTTGT---G-TATTTCCTTATT-TTTACCAATTAGGCT-TTTTTTGTACTGATA
GTTGTACAAGTG---------------TTTTTTCAGATGAGT-CGTTTTAGTAAGACCTATAACCTATGATATAGCTTTT
TGTCAAATATGCTACTGTGTGAAC-TTTTTGATGTTTTTGCATGGCATGTGCATTTTTAAAGTATGATAAGAGTGCTAGT
ACTTATTTTATGTTTTTAGGTACCTGGAATTAAGTTTTCGCATTTTTGTTC--TTGAAGCAATTCTTTTGGCTTTTTGCA
TTTTGAACATGTTCCTCATTAAATCATAGTCATTCACTACAATATCAAGGATTTATATTGTATGTTTTCACCCTTACAAA
CCTTTTTTTCAATCATGATT-----------------------------------------------TGTTCGTTGCAGG
GTTGACTGTGGTATTCATACCGCATTATACTTGAAACACTGGAAGCCTAGGGTCAAGATGCATGACATTATTAAGGATGA
AGGTATTCCTAATATTAGAGTAAGATTGGCGAATGAGATGATGTTCACTGACCTCAATATTCTGACAGAGCAGAAGAACT
TTGTTCTTGATTTCTGA---------------------------------------------------------------
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>chr4D_1_TraesCS4D01G330800
TGGGTGTCGCGATAGCCCCGCAAACTCTCCTGAAGTAGAGATCTTGTATGAACTTAAGAGATCTGATAAGGATAACATCT
TGCTTGCTAATTCCGAAGAAGTTTACAATG-AAAAGATCCAAAATCATTCTGCTGGTAACTCTGGAAGAGAGGCAAACAG
ATATGGGCCAAAGAGAATTGTACATCCAAGCAAATACAATGCGTCTCCTTATCTAAATGAGAAATCATCAAAATATCATG
TCAGCACCAGGATGATTCAATTGCATGATGCTATTGTCACCCTGTCTCTTGATGAGAACTTCAAATAGTGAGTACA----
--TGCTCTCTGATCCTTTTTGTGCAAATAGTTGTTATGTTGTACATGAATACCTGTACTTTTCTTATCTTATACCTTTTT
TATG---------------T----TTTTTGATTGCAGCAAACCATGTATTGATTATGGCAAGGTTTCAGTTACA--TATT
TTTTGTTTGGTACTTCTTTTGCAAACGAGGGCCTAGTTGATACATATACTATAAATGCTTGGTGTCGTAAATTGTCTCTA
GACAACAAGCCAAAGGATTCTAAAGTGCATCATTTTTT-CCACCTCATTTCTGTGAGTATAATTATATTTTTTG--CTCT
ATTTTTGTTTCTTTGATTCATGATCATTTT-TTTATAC---TTT--AGCGAGAGTTTTCTGTATATTCTTATTACTATAC
TAACTC-TTTTTTATTTTTAACAGGAGCATCTTATGAACATGGAGTCATATGATACCCAAGAGTTGTACGATCAAAAGTC
CAATATGGTAAAGAGATGTTTTCAGTTGGCAAATGGCGCAAGATTAATCCATACATGCAATGAAGTAAATATACTTGATT
CACATTTT----TATTTTCATCTTTTTTTTGTTTTCAC--GCATTG-TTTTGAGTGTTTATTTATTACCAATGTTTTTAT
CTTTTTTCAGGTGCACTTTCCTACATTATACACTCTAAATCAATGCAAGCA-CTGGTTTGATTTTGTTGTCTTGTTTCAG
CATGAAATGTTTGTTATTTTAGATTCAGCATTTGATGAGAAGAGTGACTACCACAAGCATGTGTTGAGCATTCTGGTAAT
TCTATAAAGTAAATGTTTTTAATCTTATT---------TT-TTGTCCTCT---TTTTCTCCACTTCTGCATGATGTTCTT
TGCTGC-CCTACGCATTCTAATTTTTTAG---TTCACTGTAAATTTACAGATCCCAAATTTCAAGAGGGTTTGGAACATG
TTTGGGAGCTCGCGGAATCTTAATTGGAGAATTTGGTCTACACATTTTATTGACGTGCCTAAACAATCAAATGCGTAAGT
TCTTTTTTAATTTTTATT-TT-CTGCAATTTGATGTTCATG--TTTTT------TGTGCT--------AAATATGCT-TT
TTAGAATTATGAGGACGCAAGTTATATTTGT---G-TATTTCCTTATT-TTTACCAATTAGGCT-TTTTTTGTACTGATA
GTTGTACAAGTG---------------TTTTTTCAGATGAGT-CGTTTTAGTAAGACCTATAACCTATGATATAGCTTTT
TGTCAAATATGCTACTGTGTGAAC-TTTTTGATGTTTTTGCATGGCATGTGCATTTTTAAAGTATGATAAGAGTGCTAGT
ACTTATTTTATGTTTTTAGGTACCTGGAATTAAGTTTTCGCATTTTTGTTC--TTGAAGCAATTCTTTTGGCTTTTTGCA
TTTTGAACATGTTCCTCATTAAATCATAGTCATTCACTACAATATCAAGGATTTATATTGTATGTTTTCACCCTTACAAA
CCTTTTTTTCAATCATGATT-----------------------------------------------TGTTCGTTGCAGG
GTTGACTGTGGTATTCATACCGCATTATACTTGAAACACTGGAAGCCTAGGGTCAAGATGCATGACATTATTAAGGATGA
AGGTATTCCTAATATTAGAGTAAGATTGGCGAATGAGATGATGTTCACTGACCTCAATATTCTGACAGAGCAGAAGAACT
TTGTTCTTGATTTCTGATTCA-GCTCCCAAGTAAGCTTGCCATCTTATACATT-TCTAATTTC-----------------
------TGATTCT-TGTGCCATCTGTTTTATAATTTTTGCCATTTCAGTACTTTTTGT-AAAATTTAACAACCAACATTA
TTTTTTATTTGATGTTTTGCTTTGTTGCAATCTCAGAATGTAGCCATTTCAACAAGGAGATAACTATTCAAAAG-ATGGA
GTCAA-----ACAAAGCATAGAGTCAATTTCGAAGACGGAATGAAGACAATTTCAATATTAGAATGTAGCTACTTCATAT
GTAATAGGACCATTTTTATGAATGATTGGAATGTTATGTGCATGAAACATTACGACATTTTTTATGTAAATGATTCCTCA
TGTGTACTGTGATGATGATATGATTTGAGATATTATAGCGTTTCTTTTTACTT---TTTTTCCAAATTGATGTGATGCTA
CTTTGAGTTGTTAATATCTCGCTGAGCTGTAAAGTTTTCCATATTAGTTTCATCCTGGATCATGTTGGGCTATTTGATTT
CTGTATAGATCAAACAAGATCAACAATGATATGATCCTAAATTTTATTTATTTTATTTCTGCAGTTTTCTAACATTTTTT
AATTTGC-TTTTAATGTGTTATTTTCGAACA--TTTCATAG-TTTAAAACATTTTTCTTTTTATAAGTTTTACCTTTTGT
GATGTTATTGGAATAAGAATTTTGATAAGTTAAAACATTTTTCTGGATTATATGTTCATTTTGTTATCTCAAAACTTACT
TTATCTTTATTTTCTGAATTATGATGTTTCAAAT-----------------------CAATTTTTCTGACTTGATTTGAA
ACATTGTTTATATAT-ATATTTTTCTTAGTCTTTTTTGTTAAAACATTTTTTTCATAATATAGATTTTGCTTAATGTTTT
TCTTGTTTTGCAGAAAAAAGTTTGATTACTTAAAAGGTACTTT-CATTTTCTATACTCAGAAATCACTAATTTTTTCTAG
CGTTAGTTCCTTTCTATTCGGTTGCCATCTATTTTATTAGAG
>chr4D_1
TGGCTGTCGCGGTAGCCCCTCAAACTCTCCTGAAGTAGAGATCTTGTATGAACTTAAGAAATCTGATATGGATAACATCT
TGCTTGCTAATTCCGAAGAAGTTTACAATG-AAAAAATCCACAATCATTCTGCTGGTAACTCTGGAAGAGAGGCGAACAG
ATATGGACCAAAAAGGATTGTACCTCCAAGCAAATACAATGCATCTCCTTATCTAAATGAAAAATCATCAAAATATCCTG
TCAGCACCAGAATGATTCAATTGCATGATGCTATTGTCACTCTGTCTCTTGATGAGAACTTCAAATAGTAAGTCCA----
--ATTTTTTTGTTCC---TTGTGAAATCAGTTGTTCTGTTTTACATAAATACATGTACTTTCGTTATCTTATACCTTTAT
-------TT--TTTTTTATG----TTTTCGATTGCAGCAAACCATGTATTAATTATGGCAAGGTTTCAGTTACG--TATT
TTTCGTTTGGTACTTCTTTTGCAAACGAGGGCCTAGTCGACACGTATACTATAAATGCTTGGTGTCATAAATTGTCTTTG
GACAACAAGCCAAAGGAGTCTAAAGTGCATCACT-TTTTCCACCTTATTTCTGCGAGTACAATTATCATTCTC-CTCTA-
----TTGTTTGTCTGTGTCTTGTTCATTTA-TTTATAC---TTT--AGCCTGAGT-------------------------
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>chr5D_1
TGGGTGTCGCGATAGTCCCGCTAACTCTCCTGAAGTAGAGATCTTGTACGAACTTACGAGATCTGATATGGATAATATCT
TGTTTGCTAATTCCGAAGAAATTTACAATG-AAAAGATCCATAATCATTCTGCTGGTAACTCTGGAAGAGAGGCAAACAT
ATATGGACCAAAGAGAATTGTACATCCAAGCAAATACAATGCGTCTCCTTATCTAAATGAAAAATCTGCAAAATATCCTG
TCAGCACTAGGATGATTCAATTGCATGATGCTATTGTCACCTTGTCTCTTGATGAGAACTTCGAATAGTGAGTACA----
--TTTTTTCTGTTCC---TTGTGCAAACAGTTGTTATGTTTTACATAAATACATGTACTTTTCTTATCTTATACCTTTTT
CTTTTC--TCCTTTTTTATG----TTTTTGATTGCAGCAAACCATGTATTGATTATGGCAAGGTTTCAGTTACA--TATT
TTTTGTTTGGTACTTCTTTTGCAAACGAGGGCCTAGTCGATACATATACTATAAATGCTTGGTGTCGTAAATTGTCTCTG
GACAACAAGCCAAAGGATTCTAAAGTGCATCACTTTTT-CCACCTTATTTCTGTGAGTACAATTATAATTCTG-CTCTA-
----TTGTTTCTCTGATTCATGATCATTTTATTTATAC---TTT--AGCATGAGTTTTCTGTATATTTTTATTACTATAC
TAACTC-TTTTTTATTTTTAACAGGAGCATCTTATGAACATGGACTCATATGATACCCAAGAGTTGTACGATCAAAAGTC
CAATATGGTAAAGAGATGTTTTCAGTTGGCAAATGGTGCAAGATTAATCCATACATGCAATGAAGTAAATATACTTGATT
CACATTTA----TATTTTTCTCTATTTTTTATGTTTTGATGCATTG-TTTTGAGTGTTTATTTACTACCAATGTTTTATC
--TTTTTCAGGTGCACTTTCCTACATTATACACTCTCAATGAATGCAAGCA-TTGGTTTGATTTTGTTGTGTTGTTTCAG
CATGAAATGTTTGTTATTTTAGATTCAACATTTGATGAGAAGAGTGACTACCACAAGCATGTGTTGAGCATTCTGGTAAT
CCTATAAAGCAAATGTTTTTAATCACATT---------TTTTTGTTCTCT---TTTTCTCCCCTTCTACATGATGTTCTT
TGCTGCGCCTACACATTATAATTTTTTAG---TTCGCTGTAAATTTACAGATCCCAAATTTCAAGAGGGTCTGGAACATG
TTTGGCAACTCGCGAAATCTTAATTGGAGAAATTGGTCTACACATTTTATCGACGTGCCTAAACAATCAAATGTGTAAGT
TCTTATTTTATTTT---ATTTTCTGCATTTTT----------------------------------------ATGCC-TT
TTAGAATCATGAGGATGCAAGTTGTACTTGT---A-TATTTTCCTAAT-TTCTCCAATTAGGCT-TTTTTTGTACTGATA
GTTGTACATTTC----------------TTTTTCAGTTGAGT-TGTTTTAGTAACACCTATAACCTATAATACC----TT
TTTCAAGTACGCTACTGTGCAAAC-TTTTTGCTG-TTTTGCATGGCATGTGCATTTTTAA-GTATGATAAGAGTGCTAGT
AATTATTTTATGTTTTTAGGTTTCTGGAATTAGGTTTTCACATTTTTGTT-TTTTGAAGAAATTCTC-TGGCTTTTTGCA
TATTGAACATGTTC-TCATTAATTCATAGTCATTCACTGCAATATCAAGGATTTATATTCTATGTTTTCACCCTTAGGAA
CCTTTTGGAATCTTTGA--T-----------------------------------------------TTTTCGTTGCAGT
GTTGACTGTGGTATTCATACTGCATTATACTTGAAACACTAGAAGCCTAGGGTCAAGATGCACGACATTATTAAGGATGA
AGATATTCCTAATATTAGAGTAAGATTGGTGAACGAGATGATGTTCACTGACCTCAACATTCTGACTGAGCAGAAGAACT
TTGTTCTTGATTTCTGATTTGTGCTCCGAAGTAAGCTTGCCATCTTATACATTGTTTTACAGCATTTGTACATTTTTGA-
-------GATTCT-TGTGCCATCAGTTTTATTATTTTTGCCATTTCAATACTTGTTGTAAAAATTTTACAACCGACCTTA
--TTTTATTTGATGTTTTGCTTTGTTGCAATCTCAGAATGTAGCCATTTCAACAAGGAGACAACTCTTTCAGGCAATGGA
GTCAATTCAAACAAAGCATAGAGTCAATTTCGAAGACGGAATGAAGACAATTTCAATATTAGAATGTAGCTACTTCATAT
GTAATAGGACCAATTTTATGAATGATTGGAATGTAATGTGCACGAAACATTACGACATTTTTTTTGTAAATGATTCCTCA
TGTGTACTGTGATGATGATATGATTTGAGATATTACAGCATTTCTTTTTACTTTTCTTTTTCAAATTTGATGTGATGCTA
CTTTGAGTTGTTAATATCTCGCTGAGCTGTAAAGTTTTCCATATTAGTTTCATCCTGGATCATGTTGTGCTGTTTGATTT
CTGTATAGATCAAACAAGATCAACAATGATATTATCCTAAATTTTATTT-TTTTATTTCTGCAGTTTTATAATATTTTTT
AATTCGCTTTTT-ATGTGTTATTTTCGAACA--TTTTCACATTTTAAAACATTTTTCTTTTTATAAGTTTTCCC--TTGT
GATGTTGTTGGAATGAGAATTTTGATAAGTTAAAACATTTTTCTGGATTATATGTTCATTTTCTTATCTCAAAACTTACT
TTATCTTTATTTA-TGAATTATGATGTTTCAAAT-----------------------CAATTTTTCTCACTTGATTTGAA
ACATTGTTTTTATAT-ATTTTTT-CTTAGCCTTTTTTGTTAAAACATTTTTTTCATAATATAGATTTTGCTTGATGTTTT
TCTTGTTTTGCAGAAAAAAGTTTGATTACTTAAAAAGTACTTT-CATTTTCTATACTCAGAAATCACTAATTTTTTCTAG
CGTCGGTTCCTTTCTATTCGGTTGCCATCTGTTTTCTTAGAG
>chr2D_1
TGGGTGTCGCGATAGCCCCGCACACTCTCCTGAAGTAGAGATCTTGTATGAACTTAAGAGATCTGACATGGATAACATCT
TGCTTGCTAATTCCGAAGAAGATTACAATG-AAAAGATCCATAATCATTCTGTTGGTAACTCTGGAAGAGAGGCAAACAG
ATATGGACCAAAGAGAATTGTACATCCAAGAAAATTCAATGTGTCTCCTTATCTAAATGAAAAATCATCAAAATATCCTC
TCAGCACCAGGATGATTCAATTGCATGATGCTACTGTCACCCTGTCTCTTGATGAGAACTTCAAATAGTGAGTACA----
--TTTTTTCTGTTCC---TTGTGCAAAAAGTTGTTATGTTTTACATAAATACCTGTACTTTTCTTATCTTCTAGCTTTTT
CTTTTC--T--TTTTTAATG----TTTTTTATTGTAGCAAACCATGTATTGATTATGGCAAGGTTTCAGTTACA--TATT
TTTCGTTTGGTACTTCTTTTGCAAACAAGGGCCTAGTCGATACATATACTATAAATGCTTGGTGTCGTTAATTGTCTGTG
GACAACAAGCCAAAGGATTCGAAAGTGCATCACTTTTT-CCACCTCATTTCTGTGAGTACAATTATAATTCTG-CTCTA-
----TTGTTTCTCTGATTCATGATCATTT--TTTATAC---TTT--AGCGTGACTTTTCTATATATTCTTATTACTATAC
TAACTC-TTTTTTATTTTTAACAGGAGCATCTTATGAACATGGAATCATATGATACCCAAGAGTTGTACGATCAAAAGTC
CAATATGGTAAAGAGATTTTTTCAGTTGGCAAATGGTGCAATATTAATCCATACATGCAATGAAGTAAATATACTTGATT
CACATTTT----TATTTTCTCTA--TTTTTTTGTTTTCATGCATTG-TTTTGAGTGTTTATTTATTACCAATGTTTTATC
--TTTTTCAGGTGCACTTTCCTACATTATACACTCTCAATCAATGCAAGCA-TTGGTTTGATTTTGTTGAGTTGTTTCAG
CATGAAATGTTTGTTATTTTAGATTCAGCATTTGATGAGAAGAGTGACTACCACAAGCATGTGTTGAGCATTCTGGTAAT
TCTATGAAGCAAATCTTTTTAATCTCATT---------TTTTTGTTCTCT---TTTTCTCTACTTCCGCTTGATGTTCTT
TGCTGCGCCTACGCATTCTAATTTTTTAG---TTCGCTGTAAATTTACAGATCCCAAATTTCAAGAGGGTCTGGAACATG
TTTGGGAGCTCGCGGAATCATAATTGGAGAAATTGGTCTACACATTTTATTGACGTGCCTAAATAATCAAATGCGTAAGT
TCTTTTTTATTTTA---TTTT-CTGCATTTTGATGTTCATGGTTTTTG------TGTTAAATGTTTTGAATTATGCC-TT
TTAGAATGATGAGGATGCAAGTTATACTTGT---A-TATTTCCCTAAT-TTTACCAATTAGGCT-TTTTTTGTACTGATA
GTTATACAAGTG---------------TTTTTTCAGTTGAGT-CATTTTAGTAAGACCTATAACCTATAATATA-CCTTT
TGTCAAGTATGCTACTGTGCAAAC-TTTTTGCTG-TTTTGCATGACATGTGCATTTTTAA-GTATGATAAGAGTGCTAGT
ACTTATTTTATGTTTTTAGGTATCTGGAATTAGGTTTTCGCATTTTTGTTC--TTGAGGCAATTCTC-TGGCTTTTTGCA
TATTGAACATGTTCCTCATTAATTCATAGTCATTCATTGCAATATCAAGGATTTATATTGTATGTTTTAACCCTTAGGAA
CCTTTTTCAATC-TTGA--T-----------------------------------------------TTTTCGTTGCAGT
GTTGACTGTGGTATTCATACCACATTATACATGAAATACTGGAAGCCTAGGGTCAAGATGCACGACATTGTTAAGGATGA
AGATATTCCTAATATTAGAGTAAGATTGGAGAACGAGATGATGTTCACTGACCTCAACATTGTGACTGAGCAGAAGAACT
TTGTTCTTGATTTCTGATT-GTGCTCCCAAGTAAGCTTGCCATCTTATACATT-TTTTACAGCATTTGTACATTTGTTCA
TTTTTGTGATTCT-TGTGCCATCTGTTTTATTATTTTTGCCATTTCGATACTTTTTGT-AAAATTTTACAACCGACCTTA
T---TTATTTGATGTTTTGCTTTGTTGCAATCTCAGAATGTAGCCATTTCAACAAGGAGATAACTCTTCAGACG-ATGGA
GTCAATTCAAACAAAGCATAGAGTCTATTTCAAAGACTGAATGAAGACAATTTCTATATCAGAATGTAGCTACTTCATAT
GTAATAGGACCATCTAG--GAATGATTGGAATGTTATGTGCACGAAACATTACGACATT-TTTTTGTAAATGATTCCTCA
TGTGTACTGTGATGATGATATGATTTGTGATAATACAACATTTCTTTTTACGTTTTTTTTTCAAATTTGATGCGATGCTA
CTTTGAGTTGTTAATATTTCGCTGAGCTGTAAAGTTTTCCACATTAGTTTCATCCTCGATCATGTTGTGCTGTTTGATTT
CTGTATACTTCAAACAAGATCAACAATGATATGATCCTAAT-----TTT-TTTTATTTCTGCAGTTTTCTAACATTTTTT
AATTTGC-TTTT-ATGTGTTATTTTCGAACA--TTTTCACATTTTAAAACATTTTTCTTTTTATAAGTTTTTGCTTTTGT
GATGTTGTTGGAATAAGAATTTTGATAAGTTAAAACATTTTTCTGGATCATATGTTCGTTTTCTTATCTCAAAACTCACT
TTATCTTTCCCAACGTAGGTTTATTCTTTTTGATCGCTCTACAAATAATAGTGGATGCAATTTTTTTGACTTGATTTGAA
ACATTGTTTTTATATTATTTTTT-CTTAGTCTTATTTGTTAAAACATATTTTTCATTATACAGAATTTGCTTAATGTTTT
TCTTGTTTTGCAGAAAAAAGTTTGATTACTTAAAAAGTACTTT-CATTTTCTATACTCAGAAATCACTAATTTTTTCTAG
CGTCGGTTCCTTT-----------------------------
>chr1D_1
TGGTTGTCGTCATAGCCCCTCAAACTCTCCTGATGTTGAGATCTTATATGAAGTTAAGAAATCTGATACGGAAAACAACT
TGCTTACTAATTCTGAAGGCATTTACAATG-AAAAAATTAACAATCATTCTGCTAGTAAATCTGGAAGAGAGGTGAACAA
ATATGGACCAAAAAGGATTGTACATCCTAGCAAATACAATGCATCTCCTTATGTGAATGAAAAATCATCAAAATATCCTG
TCAGTACAAGAATGATTCAATTGCATGATGTCATTGTCACTTTGTCTCTTGATGAGAACTTCAAATAGTAAGTTTCGTCC
ACTTTCTTC-ATTAC---TTATGCATTCAGTTGTTATGTTT-CATAAATTA--TTGTCTTTTGTTATATTATACCTTATT
TTTCTATTT--TT----ATC----TTTTTGGTTGGAGCAAACCATGTATTGATTATGGCAAGGTTACAATGACG--T-TT
TTTCGTCTGGTACTTCTTTTGCAAATGAGGGCCTAGTCGACACGTATACTATAAATGCTTGGTGTCGTAAGTTGTCTTTG
GACAACAAGCCAAAGGACTCTAAAGTGCATCATTTTTT-CCACCTCATTTCTGTGAGTACATTTTTCATTCTC-CTCTA-
----TGTTT-GTCTGTGTC-TCCTTGATTT-TTTATAC---TTC--AGTTTGAGCTTTGTGCATCTTCTTATTACTATCC
TAACTT-TTTTCA---TTTAACAGGAGCATCTTATGAACATGGACTCATATGATACTCAAGAGTTGTATGATCAAAAGTC
CAGTATGGTCCAGACATGTTTTCAGTTGGCAAATGGTGCAAGACCAATCCATACATGCAATGAAGTAAACATAGTTCATT
CAAATTTA----TTTTTTACATTTTTTT---------CATGCATTG-AGTGCTTACTAC--------------TTTTAAT
GTTTTTTCAAGTGCACTTTCCAACTTTACACACCTTCAATCAAGTTAA-CA-TTGGTTCAATTTTGTTGTATTGTTTCAG
CATGAAATGTTTGTCATATTAGATTCAACATTCGATGACAAGAGTGATTACCACAAGCATGTCTTGAGCATTTTGGTAAA
TCTATAAACTACAGCTTTTTCCTCTTATA---------TATTTT--------GTTTGTTTCCATTTTCCATGATGTTCTC
-GTTGTGCATGCACATTCTGGTAAATTAG---TTTGATGTAAATTTGCAGATACCAAATTTCAAAAGGGTTTGGAACATG
TATCGGAGCTCACGGAACCTTAATTGGAGAAATTGGTCTACACATTTTATTGATGTGCCTAAACAATCAAATGCATAAGT
TCTTTCTTTATTTA---TTTTGCG-----TTACCATTTCC---CTTTT------TGTAAAATGTATGTACC-ATGCA-GT
TTAGAATGTCGAGGATGCAAGTTCTAATTGT---AGGTTTTTCTGATT-ATAGGAATTAGGTTT-ATTTTTGTACTGATA
GTTATACGTGTG---------------CATTTTCAGTTGAGGCTTTATTAGTAAGACCTAGTACCTATAATGCA-CTA--
TGTCAAATATCCTACTATGAAAAC-TTTTCTCTA-TG--GCATAGCATGTGCA-ATTTTA-GTACGGTAAGAATGCTAGT
TCTAATTGTATTTTTTTAGGTATCAAGAATTA------------------------------------------------
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>chr1D_1
TGGTTGTCGTCATAGCCCCTCAAACTCTCCAGATGTTGAGATCTTATATGAAGTTAAGAAATCTGATACGGAAAACAACT
TGCTTACTAATTCTGAAGGCATTTACAATG-AAAAAATTAACAATCATTCTGCTAGTAAATCTGGAAGAGAGGTGGACAG
ATATGGACCAAAAAGGATTGTACATCCTAGCAAATACAATGCATCTCCTTATGTAAATGAAAAATCATCAAAATATCCTG
TCAATACAAGAATGATTCAGTTGCATGATGTCATTGTCACTTTGTCTCTTGATGAGAACTTCAAATAGTAAGTTTCGTCC
ACTTTATTC-GTTAC---TTATGCATTCAGTTGTTATGTTT-CATAAATTA--TTGTCTTTCGTTATCTTATACCTTATT
TTTCTATTT--TT----ATC----TTTTTGGTTGTAGCAAACCATGTATTGATTATGGCAAGGTTACAATGACG--T-TT
TTTCGTCTGGTACTTCTTTCGCAAATGAGGGCCTAGTTGACACGTATACTATAAATACTTGGTGTCGTAAGTTGTCTTTG
GACAACAAGCCAAAGGACTCTAAAGTGCATCATT-TTT-CCACCTCATTTCTGTGAGTACATTTTTCATTCTC-CTCTA-
----TGTTT-GTCTGTGTC-TCCTTGATTT-TTTAGAC---TTC--AGTTTGAGCTTTGTGCATCTTCTTATTAGTATCC
TAACTT-TTTTCA---TTTAACAGGAGCATCTTATGAACATGGACTCATATGATACTCAAGAGTTGTATGATCAAAAGTC
CAGTATGGTCCAGAGATGCTTTCAGTTGGCAAATGGTGCAAGACCAATCCATACATGCAATGAAGTAAACGTAGTTCATT
CAAATTTA----TTTTTTACATTTTTTT---------CATGCATTG-AGTGCTTACTACTTTTA--------------AT
GTTTTTTCAAGTGCACTTTCCAACTTTACACACCTTCAGTCAAGTTAAGCA-TTGGTTCAATTTTGTTGTATTGTTTCAG
CATGAAATGTTTGTCATATTAGATTCAACATTCGATGACAAGAGTGATTACCACAAGCATGTCTTGAGCATTTTGGTAAA
TCTATAAACTACAGCTTTTTCCTCTTATA---------TATTTT--------GTTTTTTTCCATTTTCCATGATGTTCTC
-GTTGTGCATACACATTCTGGTAAATTAG---TTTGATGTAAATTTGTAGATACCAAATTTCAAAAGGGTTTGGAACATG
TATGGGAGCTCACGGAACCTTAATTGGAGAAATTGGTCTACACATTTTATTGATGTGCCTAAACAATCAAATGCGTAAGT
TCTTTCTTTATTTC---TTTTGCG-----TTACCATTTCC---CTTTT------TGTAAAATGTATGTACC-ATGCA-GT
TTAGAATGTCGAGGATGCAAGTTCCAATTGT---AGGTTTTTCTGATT-ATAGGAATTAGGTGT-ATTTTTGTACTGATA
GTTATACGTTTG---------------CATTTTCAGTTGAGGCTTTCTTAGTAAGACCTAGTACCTATAATGCA-CTA--
TGTCAAATATTCTACTATGAAAAC-TTTTCACTG-TG--GCATAGCATGTACA-ATTTTA-GTACGGTAAGAATGCTAGT
TCTAATTGTATGTTTTTAGGTATCAAGAATTAGCTTTTGGGACTCATATA-TTTT-TGGCCGTTCTA-TGGCTTTTTTAA
TTTTGATTTGTTCTTT--TTCAATCCAATCCATTCACTGCAATGTGAAGGATTTTTCTTACATGTTT-------------
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>chr7D_1
TGGTTGTCTTGATAGCCCCGCAAACTCTCCTGAAGTTGCCATCTTATATGAAGTTCACGAACCTGACATGGATAACATCT
TGCTTGCTAATACTGAAGGAGTTTATAATG-ATAAAATTAACAATCACTCTGCTAGTAGATCTGGAAGAGAGGCGAACAG
ATATGGACCAAAAAGGATTGTACATCCAAGCAAATACAATGCATCTCCTTATGTAAATGATGTATCATCAAAGTATCCTG
TCACCACCAGAATGATTCAATTGCATGATGCTATTGTCACTCTGTCTCTTGATGAGAACTTCAAATAGTAAGACATTTC-
--TTTGTGTTTTTAC---TTTTGCATTAAGTTGTTCTGTTTTCATAAATTAC-TTTTCTTTTGTTATCTTATACCTTATT
TTTTTTCTT--TTTTTCTTT----TTTTTGGTTTCAACAAACCATGTATTGATTATGGCAAGGTTTCAGTGACG--TATT
TTTCATTTGGTACTTCTTTCGCAAATGAGGGCCTAGTGGACACTTATACTATAAATGCTTGGTGTCGTAAATTGTCTTTG
GACAACAAGCCAAATGACTCTAAAGTGCATCACTTTTT-CCACCTCATTTCTGTGAGTACATTTTTCATTTTG-CTCTG-
----TGTTTTGTATGTGTCTTGTTGATTTC-TTAATAT---TTTTTAGGTCGAGCTTTGTGCATATTCTTTTTACTATCC
TAACTATCTTTCA---ATGAACAGGAACATCTTATGAACATGGACTCATATGATACTCAAGAGCTCTATGATCAAAAGTC
CAACATGGTTAAGAGATGCTTTCAGTTGGCAAACGGTGCAAGATTAATTCATTCATGCAATGAAGTAAACATTCTTCATT
CACATTTTATTTATCTACACTTTTCTTT---------CATGCATTTTAGTGCTTCCTATTTGTT--------------AA
ATTTTTTCAGGTGCATTTTCCAACTCTATACACCTTCAATCAATGCAAGCA-TTGGTTTGATTTTGTTGTATTGCTCCAG
CATGAAATGTTTGTCATCTTAGATTCAGCATTTCACGACAAGAGTGATTACCACAAGCATGTGTTGAGCATTTTGGTAAT
TCTATAAACTAGAGCTCTTCGCTCTCATA---------TGTTTT-----T---GTTTTTTGCATTCTCCATGATGTTCTC
-ATTGTGCATATGCATTTTAATAATTTAG---TTCGCTGTAAAATTGCAGATACCAAATTTCAAAAGGGTTTGGAACATG
TATGGAAGCTCACGAAACCTTAATTGGTGAAATTGGTCTACACATTTTATTGATGTGCCTAAACAATCAAATGCGTCAGT
TCTTTCTTTATTTG---TTTTGCG-----TTAACATTTTC---TTTTCATTTTATGTGGAATGCATGCACC-ATGCA-GC
TTAGAATGATCTGGATGCAAGTTCTATTTGTTCTAGGTTTTTCTAAAT-TTAAAAAATAGTTTT-TTTTGTATG-TGTTA
GTTGTACATGTG---------------CATTTTTCAG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr4A_1
TGGTTGTCGTGATATCCCCGCAAACTCTCCTGAAGTTGAGATCTTATATGAAGTTCACAAACCCAACATGGATAACATCT
TGCTTGCCAATTCTGAAGCAGTTTATAGTG-GTAAAATTAACAATCACTCTGCTAGTAGATCTGGAAGAGAGGAGAACAG
ATATGGACCAAAAAGGATTGTACATCCAAGCAAATACAATGCATCTCCTTATGTAAATGATGTATCATCAAAGTATCATG
TCACCACCAGAATGATTCAATTGCATGATGCTATTGTCACTCTGTCTCTTGATGAGAACTTCAAATAGTAAGACATTTC-
--TATGTGTTTTCAC--TTTTTGCAGTAAGTTGTTCTGTATTTAGAAATTAC-TGTTCTTTTGTTGTCTTATACCTTATT
TTCTTCCT-----------T----TTTTTCATTGCAGCAAACCATGCATTGATTATGGCAAGGTTTCAGTTACG--TATT
TTTCATTTGGCACTTCTTTCGCAAATGAGGGCCTAGTGGACACTTATACTATAAATGCCCGGTGTCGTAAATTGTCTTTG
GACAACAAGCCGAAGGAATCTAGAATGCATCATTTTTT-CCACCTCATTTCTGTGAGTACATTTTTCATTTTTTCTCCG-
----TGTTT-GTATGTGTC-TCATTGATTT-CTTAATTTTTCTA--AGGTCGAGCTTTGTGCATATTCTTTTTACTATCC
TAACTATCTTTCA---ATGAATAGGAACATCTTATGAACATGGACTCATATGATACTCAAGAGCTCTATGATCAAAAGTC
CAACATGGTTAAGAGATGCTTTCAGTTGGCAAATGGTGCAAGATTAATTCATACATGCAATGAAGTAAACATTCTTCATT
CACATTTTACCTTTTTACATTTTTCTTA---------CATGCATTTTAGTGATTACTTTTTCTT--------------AA
AAAAATCCAGGTGCATTTTCCAACTCTATACACCTTCAATGAGTGCAAGCA-TTGGTTTGATTTTGCCGTATTGTTACAA
CATGAAATGTTTGTCATCTTAGATTCAGCATTCGATGACAAGAGTGATTACCACCAGCATGTGTTGAGCATTTTGGTATT
TCTATAAACTAGAGCTCTTCGCTCTCATA---------TG---------T---TTTTTTTGCATTCTCCGTGATGTTCTC
-GTTGTGCATATGCATTTTAATAATTTAG---TTCGCTGTAAAATTACAGATACCAAATTTCAAAAGGGTCTGAAACATG
TATGGAAGCTCACGGAACCTTAATTGGCGAAATTGTTCTACACATTTTATTGATGTGCCTAAACAATCAAATGCGTAAGT
TTTTCTTTATTTGT---TT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr3D_7
------TCGCGATAGCCCCGCAAACTCTCCTGAAGTTGAGATCTTATATGAAGTTAAGAAATCTGATATGGATAACAACT
TGCTTGCTAATTCTGATGGAGTTTATAATCAAAAAAATTAACAATCATTCTGCTAGTAAATCTGGAAGAGAGGCGAACAT
ATATGGACCAAAAAGGATTGTACATCCCAGCAAATCCAATGCATCTCCTTATGTAAATGAAAAATCATCAAAATATCCTG
TCACCACCAAAATGATTCAATTGCATGATGTTATTGTCACTTTGTCTCTTGATGAGAACTTCAAATAGTAAGTCCA----
--CTTTTTC-ATTCC---TTATGCATTCATTTTTTATGTTT-CATAAATTAA-TGTCCTTTCGTTATCTTATACCTTATT
TTTCT-TTT--TT----ATC----TTTTTGGTTGTAGCAAACCATGTATTGATTATGGCAAGGTCATAGTGATG-TT-TT
TGTCTTTTGGTACTTCTTTCGCAAATGAGGGCCTAGTTGACACGTATACTATAAATGCTTGGTGTCGTAAATTGTCTTTG
GACAACAAGCCAAAGGATTCTAAAGTTCATCATTTTTT-CCACCTCAGTTCTGTGAGTACATTTTTGATTCTC-CTCTA-
----TGTTT-CTCCATGTC-TCCTTGATTT-TATGTAC---TTC--AGTTTGAGCTTTTGTACA----------------
-----TCTTCTTA---TTTAACAGGAGCATCTTATGAACATGGACTCATATAATACTCAAGAGTTGTATGATCAAAAGTC
CAGTATGGTCCAGAGATGCTTTCAGTTGGCAAATGGTGCAAGACCAATCTACTCATGCAATGAAGTAAACATTCTTCATT
CACATTTA----TTTTTCCACATTTTTT---------CATGCATTG-ATTGCTTACTATTTTTA--------------AT
GTTTTTGCAGGTGCACTTTCCAACTTTATATACCTGCAATCAAGTTAAGCA-TTGGTTCGA-TTTGTTGTATTGTTTCAG
CATGAAATGTTTGTCATACTAGATTCAGAATTCGATGACAAGAGTGATTACCACAAGCATGTTTTGAGCATTTTGGTAAT
TCTATAAACTAGAGCTTTTTCCTCTTATA---------TATTTA---------GTTTTTTCCATTTTCCATGATGTTCTC
-GTTGTGCATACGCATTCTGGTAATTTAG---TTTGTTGTAAATTTGCAGATA-CAAATTTCAAAAGGGTTTGGAACATG
TATGGGAGCTCACGGAACCTTAATTGGAGAAATTGGTCTAGACATTTTATTGATGTGCCTAAACAATCAAATGCGTAAGT
TCTTTCTTTATTTG---TTTTGCG-----TTAACAATTCTG--TTTTC------TGTAAAATGTATGTACC-ATGCA-GT
TTAGAATGATGAGGATGCAAGTTCTAATTGT---AGGTTTTTCTGATT-ATAGGAATTAGGTTTATTTTTTTTACTGATA
GTTATACGTGTG---------------CATTTTCAGTTGAGGC-------------CCTAGTACCTATAATGCA-CTA--
TGTCAAATATCCTACTATGAAAAC-TTTTCGCTG-TT--GCATAGCATATGCA-TTTTAA-GTATGGTAAGAGTGCTAAT
TCTAATTGTATGTTT-TAGGTATCAGGAATTAGCTTTTTGCACTCATATATTCTT-AGGCCATTCTA-TGGCTTTTTGTA
TATTCATTTGTTCTTG--TTCAATCCAATTCATTCACTGCAATGTCAAGGATTT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr3D_12
-----------ATAGCCCCGCAAACTCTCCTGAAGTTGAGATCTTATATGAAGTTCACAAACCTGACATGGATAACATCT
TGCTTGCTAATTCTGAAGGAGTTTATAATG-ATAAAATTAACAATCACTCTGCTAGTAGATCTGGAAGAGAGGCGAACAC
ATATGGACCAAAAAGGATTGTACATCCAAGCAAATACAATGCATCTCCTTATGTAAATGATGTATCATCAAAGTATCCTG
TCGCCACCAGAATGATTCAATTGCATGATGCTATTGTCACTCTGTCTCTTGATGAGAACTTCAAATAGTAAGACATTTC-
--TTTGTGTTTTTAC---TTTTGCATTAAGTTGTTCTGTTTTCTGAAATTAC-TGTTCTTTTGTTATCTTATACCTTTTT
TTTTTCTTT--TT----TTCTTTTTTTTTGGTTGCAGCAAACCATGTATTGATTATGGCAAGGTTTCAGTGACG--TATT
TTCCATTTGGTACTTCTTTCGCAAATGAGGGCCTAGTGGACACTTATACTATAAATGCTTGGTGTCGTAAATTGTCTTTG
GACAACAATCCAAAGGACTCTAAAGTGCATCACTTTTT-CCACCTCATTTCCGTGAGTACATTTTTCATTTTG-CTCTG-
----TGTGT-GTATGTGTC-TCGTTGATTT-CTTAATATTTTTA--AGGTCGAGCTTTGTGCATATTCTTTTTACTATCC
TAACTATCTTTCA---ATGAACATGAACATCTTATGAACAAGGACTCATATGATACTCAAGAGCTCTATGAGCAAAAGTC
CAACATGGTTAAGAGATGCTTTCAGTTGGCAAATGGTGCAAGATTAATTCATTCATGCAATGAAGTAAACATTCTTCATT
CACATTTTATTTATCTACATTTTTCTTT---------AATGCATTTTAGTGCTTACTATTTCTT--------------AA
AAAATTTCAGGTGCATTTTCCAACTCTATACACCTTCAATCAATGCAAGCATTTGGTTTGATTTTGTTGTATTGTTCCAG
CATGAAATGTTTGTCATCTTAGATTCAGCATTTGATGACAAGAGTGATTACCACAAGCATGTGTTGAGCATTTTGGTAAT
TCTATAAACTAGAGCTCTTCGCTCTCATA---------TGTTTT-----TGT-TTTTTTTGCATTCTCCATGATGTTCTC
-GTTGTGCATATGCATTTTAATAATTTAG---TTCACTGTAAAATTGCAGATACCAAATTTCAAAAGGGTTTGGAACATG
TATGGAAGCTCACGGAACCTTAATTGGCGAAATTGGTCTACACATTTTATTGACGTGCCTAAACAACCAAATGCATAAGT
TCTTTCTTTATTTG---TTTTGCG-----TTAACATTTTC---TTTTCATTTTATGTGGAATGCATGCACC-ATGCA-GC
TTAGAATGATCTGGATGCAAGTTCCATTTGTTCTAGTTTTTTCTAAAT-TTAAAAATTAGGTTT-TTTTGTATG-TGTTA
GTTGTACATGTG---------------CATTTTTT---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr3D_17
----------------CCCGCAAACTCTCCTGATGTTGAGATATTATATGAAGTTAAGAAATTTGATATAGATAACAACT
TGCTTGCTAATTCTGAAGGAGTTTACAATG-AAAAGATTAATGATCATTTTGCTAGTAAATCTGGAAGAGAGGTGAAAAG
ATATGGACCAAAAAGGATTGTACATCCCGGCAAATACAATGCATCTCCTTATGTAGATGAAAAATCATCAAAACATCCTG
TCAGTACATGAATGATTCAATTGCATGATGCCATTGTCACTTTGTCTCTTGATGAGAACTTCAAATGTAA------GTCC
ACTTTTTTC-AGTCC---TTATGCATTCAGTTGTTATGTTTTCATTCCTTCCGCATTCAGTCTTTATCTTATACCTTATT
TTTCTATTT--TT----ATA----TTTTTGGTTGCAGCAAACCATGTACTGACTATGGCAAGGTTACAGTGACGTTT-TT
TTTTGTTTGGTACTTCTTTCGCAAATGAGGGCCTAGTCAACACATATACTATAAATGCTTGGTGTCGTAAATTGTCTTTG
GACAACAAGACAAAGGACTCTAAAGTGCATCATTTTTT-CCACCTCATTTCTGTGAGTACATTTTTCATTCTC-CTCTA-
----TGTTTTGTCTGTGTCTCCTTGATTTC-TTTATAC---TTC--AGCTTGAGCTTTGTGCATCTTCTTATTAGCATCC
TAACTT-TTTT--------------AGCATCTTATGAACATGGACTCATATGATACTCAAGAGTTTTATGATCAAAAGTC
CAGTATGGTCCAGAGATGCTTTCAGTTGGCAAATGGTGCAAGAGCAATCCATACATGCAATG------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr7B_23
----------------------AACTCTCCTGATATTCAGATTTTATATGAAGTTGAGAAAACTGTTGCGCAAAACAAGC
TGCTTACTAATTTAGAAGGCATTTACAATG-AAAAAATGAACAATCATTCTGCTAGTAAATCTGGAAGGGAGGTGAACAG
ATATGGACCAAAAAGGATTGTACATCCAAGAAAATACAATGCATCTCCTTATGTAAATGAAAAATCATCAAAATATACTG
TCAATAAAAGAATGATTCAATTGCATGATGCCATTGTCACTTTGTCTGCCGATGAGAACTTCAAATAGTAAGTTA-----
ACCTTTCTT-AGTAC---TTGTGCATTCAGTTTTTATGTTC-ATTGAATTAT-TGTCCTTCCTTTATCTTATACCTTATT
TTTCTTTTT--CT----ATC----TTCTTTGCTGTAGCAAACCATGTATTGATTATGGCAAGGTTACCATGACGT-T-TT
TATCGTTTGGCAC-TCTTTCACAAATGGGGGACTTGTTGACACGTATACTATAAATGCTTGGTGTCGTAAATTGTCTCTA
GAGGACAAGCCAAAGGATTCTAAAGTGCGTCACTTTTT-CCATCTCATTTCTGTGAGTATTTTTTTTCATTTTG--CTT-
----TGTGT-TTCTTTGTC-TGTTTAATTT-TTTATAC---TTC--AGTTCTAGCCTTGTACATCTTCTTATAACTATAA
TAATTTCTTTTCA---TTTAACAGGATCATCTTATGAACATGGACTCATATGACACTCAAGAGTTGTATGATCAAAAAGA
CAGTATGGTCCAGAGATGCTTTCAATTGGCAAATGGTGCAATAATAATTCATACATGCGATGAAGTAAGCATTGTTCATT
CATTGTTA----TTTTTTGCATTTATTTTC-------CATGCAATC-TGTCCTTTATTCTTTTT--------------AT
GTTCTTTCAGGTGCACTTCCCAACTTTACACACCTTCAATCAGGTTAAGCA-TTGGTTCGACTTTGTGGTTTTATTTTAG
CATGAGCTATTTGTCATATTTGATTCAGCATTCGATGAAGATAGTGATTACCGCAAGCATGTCTTAAGCATTTTGGTAAA
TCTTCAGGCTACAATTTTTCCCTTTATATGTCCCTTTCTTT-TT-----TTTAA---------------TTGATGTTCTC
-ATTGTGCATAGACATTTTGGTT---TATTACTTTGCTTTAAATTTGCAGATACCCAATTTCAAAAGGGTTTGGAACATG
TATGGGAGCTCAAGAAACCTTAACTGGAGAAATTGGTCTGCACATTTTATTGATGTGCCTAAACAATCTAATGTGTAAGT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr2B_388
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CTTTTT--CT----ATC----TTGTTCGCTGTAGCAAACCATGTATTGATTATGGCAAGGTTACAGTGACA-TT-TT
TCTCGTTTGGTACTTCTTTCGCAAATGAGGGACT---TGACACGTATACTATAAATGCTTGGTGTCATAAATTGTCTTTG
GAGAACAAGCCAAAGGATTCTAGAGTGCATCATTTTTT-CCATCTCATTTCTGTGAGTATATTTTTTCATTTG-CCATG-
----TGTTT-ATTTGTCTC-TGTTTGATTT-TTTATAC---TTC--AGTTTGAGCATTGTCCATCTTCTTATAACTATCA
TAATTTCTTTTCA---TTTAACAGGATCATCTTATGAACATGGACTAATATGACACTCAAGAGCTGTATGATCAAAAAGA
CAGTATGGTCCAGAGATGCTTTCAATTGGCAAATGGTGCAATAATAATTCATACATGCGATGAAGTAAACATTGTTCATT
CATTGTTC----TTTTTTGCATTTG-TTTC-------CATGCAATC-AGTGCTTTAT-TTTTTT--------------AT
GTTCTTTCAGGTGCACTTTCCAACTTTACACACCTTCAATCAGATTAAGCA-TTGGTTCGACTTTGTGGTATTATTTCAA
AATGAGATGTTTTTCATATTGGATTCAGCATTCAATGAAGACAGTGATTACCACAAGCATGTCTTGAGCATTTTGGTAAA
TCTACAAACTACAACTTTTCCCCTTTATA---------TTT-TT-----TTTCG---------------TAGATGCTCTC
-GTTGTGCATAGACATTTTGCTT-----TTACTTTGCTTTAAATTTGCAAATACCCAATTTCAAAAGGGTTTGGAACATG
TATGGGAGCTCAAGGAACCTTAATTGGAGAAATTGGTCTACACATTTTATTGATGTACCTAAACAATCTAATGTTTAAGT
TATTTCTTTATTTC---TTTTGCA-----TTAAGATTTCC---TTTTT------TGTAAAATGTATATAAC-ATGCA-AT
TTAGAATGATTAGGATGCAAGTTTTAATTGT---AGGTTTTTCTGATTTATAGGAATTAGGTTC-ATTTTTGTACTCATA
GATTTATGTGTG---------------GATTTTTAGTTGAGGACTTCCTAGTAAGCCCTAGTACCTATAATGCA----TC
ATGCCAATATCCTACTATGAACCTTTTTTTGCTG-TG--GCATAGCATGTGCA-ACTTTA-GTACAGTAAGATTCCAACT
TTGATTCCTTTTTTTGT---------------------------TTTGTTG--TTGA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TTTTACTGCAGT
GTTGATTGTGGTATTCATACAACGTTATATTTGAAGCACTGGAAGCCTAGGTTCAAGATGCATGACATCATTAAGGATGA
AGATATTCCAAATATTAGAGTCATGCTGGCGAATGAGATGATGTTCACTGACCTGAACATTTTGAATGACCAGAAGTACC
TTGTTCTTGAATTCTGA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr3D_909
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TTTTTA--------------AT
GTTTTTTCAGGTGCACTTTCTAACTTTACACACCTTCAATCAAGTTAAGCA-TTGGTTTGATTTTGTTGTATTGTTTCAG
CATGAAATGGTTGTCATATTAGATTCAGCATTCGATGACAAGAGTGATTACCACAAACATGTCTTGAGCATTTTGGTAAA
TCTATAAACTACAACTTTTTCCTCTTACA---------TAT-TT-----T---GTTTTTTCCATTTTCCATGATGTTCTC
-GATGTGCATACACATTCTGGTA---TAG---TTTGTTGTAAATTTGCAGATACCAAATTTCAAAAGGGTTCGGAACATG
TATGGGAGCTCACGGAACCTTGATTGGAGAAATTGGTCTGCACATTTTATTGATGTGCCTAAACAATCAAATGCGTAAGT
TCTTTCTTTATTTC---TTTTGCG-----TTAACATTTCC---TTTTT------TGGAAAATGTATGTACC-ATGCAGTT
TTAGAATGATGAGGAAGCAAGTTCTATTG----TAGGTTTTTCTGATT-ATAGGAATTAGGTTT-TCTTTTGTACTGATA
GTTATACGTGTGGATGAGGATGCAGTTTATTTTCAGTTGAGGCCTTCTTAGTAAGACATAGTACATATAATGCA-CTA--
TGTCAAATATCCTACTATGAAAAC-TTTTCGCTG-TG--GCATAGCATGTGCAATTTTTA-GTACGGTAAGAATGCTAGT
TCTAATTGTATGTTTATAGGTATCAGGAATTAGGTTTTC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr4D_953
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------AATCAATGCAAGCA-TTGGTTTGATTTTGTTGTGTTGTTTCAG
CATGAAATGTTTGTTATTTTAGATTCAGCATTTGATGACAAGAGTGACTACCACAAGCATGTGTTGAGCATTCTGGTAAT
TCTATAAACCCGAGCTTTTTACTCATATT---------TTT-TT-----GTTGTCTTCTCCACTTTTGCATGATGTTCTT
TGTTATGCATATGCATTCTGATTTTTTAG---TTTGCTGCAAATTTACAGATCCCAAATTTCAAGAGGGTTTGGAACATG
TTTGGGAGCTCCCCGAACCTTAATTGGAGAAATTGGTCTACACATTTTATTGATGTGCCTAAACAATCAAATGCGTAAGT
TCTTTTTTTATTTTTATTTTTGCA-----TTGATGTTCCAG--CTTTG------TGTTAAATGTTTTGAATTATGCA-TT
TTAGAATGATGAGGATGCAAGTTCTACTTGT---A-TATTTCCCTAAT-TTTAGCAATTAGTTT-TTTTTTGTACTGATA
GTTATACAAGTG---------------TATTTTCAGTTGAGT-CC-TTGAGTAAGACCTATAACCTATAATGTA-CTTTT
TGTCAAGTATGCTACTGTGTGAAC-TTTTTGCTG-TT--GCATAGCATGAGCATTTTTAA-GTACGGTAAGAGTGCTAGT
TCTGATTGTATGTTTTTAGGTATCTGGAATTAGGTTTTCGCACTTATTGCTTTTT-AGACAATTCTG-TGGCTTTTTGCA
AATTGAACATGTTCCTCATCAAATCATCGTCATTCACTGCAATGTGAAGGATTTATATTACATGTTTTCACACTTAGGAA
CCTTTTGATGAAGTGCAAGCGTAGTAATTTTTTAATTTTGATGCCCAATTTTTGTTTTTCCTCTTGATTTTCGCTGCTGT
GTTGACTGTGGTATTCATACCGCATTATACTTGAAACACTGGAAGCCTAGCGTCAAGATGCACGACATTATTAAGGATGA
AGATATTCCTAATATTAGAGTAAAGTTGGCGAATGAGATGATGTTCACCGACCTCAACATTCTGACTGAGCACAAGAACT
CTGTTCATGAATTCTGATA-GTGCCCACAAGTAAGCTTGCCATCTAATTCATT-TTTAT-AGCATTTGTACATTTGTTCA
TTTTTTTGATTACGTGTGCCATCTGTTTGATTATTTGTGCCATTTCTATT-TTTTTGT-AAAAATTTACAACCGACCTTA
T---TTATTTGACATTTTCCTTTGTTGCAATTTCAGAATGTAGCCATTTCACCAAGAAGATAACTCTTCCGAGG-ATGGA
GTCAATTCAAACAAAGGATGGAGTCAA-TTCAAACACGGAATGAAGACAATTCAAAATCTAA---GTAGCTAGTTCATGT
GTAATAGGCCATTTAGA---AATGATTGGAATGTTATGTGCACGAAACATTACGACATT-T--TTGTAAATGATTCCTCA
TGTGTACTGTGATGATAATATGATTTGAGATATTACAACATTTTTGTTTACTTTTTT--TTGAAAATTGATGTGATGTTA
CTTTCAGATGTTAATATCCTGCTGAGCAATAAATTTTTCCATATTAGTTTCATCCTAGATCATGTTGTGTTGTTTGATTT
CTGTATAGATCAAACAAGATCAACAATGATATGATCCTAAATTTAGTTT-TTTCATTTTTGCAGTTTTCGAACATTTTTT
TGTTTGC-TTTT-ATGTGTTATTTTCGAACAAATTTTAAAA-AATTATATATATATATATATATATGTTTTGCT--TTGT
GA---TGTTGGAAAAAGAATTTTGATAACTTAAAACAATTTTCCGGATCATATGTTCATTTTCTTATCTCAAAAATCACT
TATGTTTTCCCAGCGTAGGTTCATTC--TTTGATCCCTCTACAAATAATAGTGCCTGCAATTTTTCTGACTTGATTTGAA
ACATTGTTTTTATATT-TTTTTT-CTTAGTCTTATTTGTTAAAACATTTTTTTATAATAAG---ATTTGCTTACTGTTTT
CTTG--TTTGCAGAAAAAAGTTCGATGACTTAAAAAGTATTTTTCATTTTCTATTCTAAAAATCACTCATTTTTTCCTAG
CGTGGGTTCATT------------------------------
>SNPs
--------------------------------------------------------------------S-----------
-----------------------------------------S--------------------------------------
------S-----------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---SS------S---SS----------S------------S-----S---------------------------------
-S-S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S----------SS
SSSS----------------------------------------------S-----------------------------
--------------------------------------------S-----------------------------------
------------------------------------S-------------------------------------------
------------------------------S-S--SS----------------------------------------S--
S-----------------------------------S---------------S-----------------S---------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
---------------------------S------------------------------SS----------S-----S---
-------S-------S------------------S---------------------------------------------
------------------------------------S-------------------------------S-----S-----
-------------------------------S--S-------------------------S-------------------
----------------------S---------S---------------------------------SS------------
--------------------------------------S-------------------------------------SS--
-------S-S---SSSS-S-------------------------------------------------S----------S
--------------------------------------------------------------------------------
--S------------------------------------------------------S--------S-------------
-------------------SS----------------------------------S---SSS------------------
-------------------------------S---------------S------------------S------S--S---
-S---------------------------------------------------------------S------S-------
--------------------------------------------------------------------------------
------------------------------------------S--------------------S----------------
-----------------------------------S---S----------------------S-----------------
-------------------------------------------------------------------S---S--------
-------------------------------------------------S------------------------------
------------S-----------------------S-S-S------------------------------S--------
------S-------------------------------------------------------S-----------------
------------S-------------------------------------------------------------------
---------S--------S----S--------------------------------------------------------
-----------------------------------S--------------------------------------------
---SS-------------------------S----S------
>forward_837
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TGTTTTCAGTTGGCAAATGGC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_1909
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GTTCGTTGCAGG
GTTGACTG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_1661
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TGCATGGCATGTGCATTTTTAAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_3124
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TAGTTCCTTTCTATTCGGTTGCCA---------------
