>input_sequence_64844
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-------------------------------------------------------------------------------A
TGGCAAAGAACACATGCAAGCTCTGCTTCCGCCGCTTCGCTAGCCCCCGCGCCCTGGCAGGCCACATGCGCTCCCACTCC
GTCCGCAACCTGGCCGCGAAGCAGCAGATCTCATCGGCGTCCTCCGCGTCCACCTCGTTCAC------------------
CGCCGCCGCCGATGACGACGTCAGCTTCAAGAAGCCCCTTCCAATCTACGCGCTCCGGGAGAATCCCAAGCGCAGCCTGC
GTGTCACCGATGTCGCCTTCTCGGATCGCGAGAGTGAGGCCGAGTCCACCC------CGCCGCACCCCAAGCGCGCGCAC
GCCGCCGCTGCAGGGGCCGAGACCGAGCCGCTGAGCTCGGTGTCTGACGCTGCCACGCCGGAGGAGGACGTGGCGCTGTC
CCTCATGATGCTCTCCCGCGACTCCTGGCCATCGATGGGGCGCGGCGACGGCGA-------------------CGGCGAC
TACTCGGACGACGGGAGCGACGGCGGTTACACGCTCCCCGCTCCCGATCCG---GCGCCGGTGGAGAAGCGTACACGGTT
CCAGTGCAGCGCGTGCAAGAAGGTATTCCGTTCCTACCAGGCTCTTGGCGGCCACCGCGCCAGCCACGTGCGTGGCGGCA
GGGGCGGCTGTTGCGCGCCTCCCGTCGCTCCCCCTCCTCCT---CCTCC---GCAGCCGCTGGCACCGCTGCCATTGATG
GAACGCGAGGGGGACGAGGACATAGACGGGAAGGGGTCGCCACGGGAGTGCCCCTACTGCTACCGCGTGTTCGCCTCCGG
GCAAGCTCTTGGTGGGCACAAGAGGTCCCATGTTTGCTCCGCCGCCGCCTCTGCAGCACAGGCGCATGCAGCCGC-----
-------CGCTCCGCCGGACCCGATCAAAGCCTTTGGCATGATCGATCTGAACATCGCGCTGCCGTTCGAGGATGTGGAG
CTCTCTGCCGTGTCAGATCCCCGTTTCTCCTCCAATCCAGGTTCTTGA--------------------------------
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------------------------------------------------------------------------
>chr6B_1_TraesCS6B01G276100
TGCTCCACTCTCCAAAGATGTGGCTTCATCTCTGCCACTACTTGGTGACACCCAACCCAAGCCTCCAGGGTAGGTGGGAG
GGAGAGGGGTCGGTTTTAGGGAATGGGCAAAAGTAAAAGAATACATAATATGCCAAATTGGGATGATCTATCACGTGCAC
ATGTGTCGGTGATAGAGAAAGGCGAAGGAATAAGCTCATCTTTCGGTATACACGCCATGAAAAACGTGGAAAAGGGGGAT
CATGCTAGGCAGCTGGTAGCCACAACGTGAAGAGTTGAGGAAAGAGAGGCCCACTCACCTTCTGGCATGCACCCATGAAG
TCGAGGATTAGGTCACGTTCACCCCATCGCAAGAACACCATGAAGGGTTTGAGGAAAGGGGTCATGCTCACCTTTTTGCA
CGCAGATCGAATAATGTGTGTAACAAGTCACGCTCACTCCTAAAAGACATGGTGTGATGAGTGTGTGGGTGTTGTGAGGG
AGGGGGGGAGGGGGTGTGTA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AAGGATGCTACTAATCGTCGTTTGTGGTTGC
GTGTGAATGGTTGATACTTGCATTCGACCGTCCACTGCCCTCTCATCAAAACAAAAAAAGTTGCTCGTTATACCGTGTTA
ACTTATTACTTTATACCTTGCAGATTACATAATTTTATTTATATAACAT--AAAAAAACTGGCATACGTATATCCCACAA
AAATAGAAAGCGATTTGCACACAAGTAGTTAAGGCTGGAAAATATCAAGCAGCACATCTGTGATTTGATATGCTCCGCCA
GAGCCAGGAAGCATAAAAAAGCCCCCAGG-CC-AGCAATGGAAAGTGTCAACGCGAAATTAAAATGAAAACGTAGAAAAA
GG--AAATTAAGAATGGAAAAATAAATAGGAAGGAGAAGCTTGGCTGTTCCGCTATATTCTAACTTCCCCCGCAGCTTCT
CTCGTTTGCTCCCGTCCTCTCTCCTCGCCATTCTAGCTCCTGCCACGCTTTCCC----CGAGCTCCCCAAGCTCTCGCCA
TGGCAAAGAACACATGCAAGCTCTGCTTCCGCCGCTTCGCTAGCCCCCGCGCCCTGGCAGGCCACATGCGCTCCCACTCC
GTCCGCAACCTGGCCGCGAAGCAGCAGATCTCATCGGCGTCCTCCGCGTCCACCTCGTTCAC------------------
CGCCGCCGCCGATGACGACGTCAGCTTCAAGAAGCCCCTTCCAATCTACGCGCTCCGGGAGAATCCCAAGCGCAGCCTGC
GTGTCACCGATGTCGCCTTCTCGGATCGCGAGAGTGAGGCCGAGTCCACCC------CGCCGCACCCCAAGCGCGCGCAC
GCCGCCGCTGCAGGGGCCGAGACCGAGCCGCTGAGCTCGGTGTCTGACGCTGCCACGCCGGAGGAGGACGTGGCGCTGTC
CCTCATGATGCTCTCCCGCGACTCCTGGCCATCGATGGGGCGCGGCGACGGCGA-------------------CGGCGAC
TACTCGGACGACGGGAGCGACGGCGGTTACACGCTCCCCGCTCCCGATCCG---GCGCCGGTGGAGAAGCGTACACGGTT
CCAGTGCAGCGCGTGCAAGAAGGTATTCCGTTCCTACCAGGCTCTTGGCGGCCACCGCGCCAGCCACGTGCGTGGCGGCA
GGGGCGGCTGTTGCGCGCCTCCCGTCGCTCCCCCTCCTCCT---CCTCC---GCAGCCGCTGGCACCGCTGCCATTGATG
GAACGCGAGGGGGACGAGGACATAGACGGGAAGGGGTCGCCACGGGAGTGCCCCTACTGCTACCGCGTGTTCGCCTCCGG
GCAAGCTCTTGGTGGGCACAAGAGGTCCCATGTTTGCTCCGCCGCCGCCTCTGCAGCACAGGCGCATGCAGCCGC-----
-------CGCTCCGCCGGACCCGATCAAAGCCTTTGGCATGATCGATCTGAACATCGCGCTGCCGTTCGAGGATGTGGAG
CTCTCTGCCGTGTCAGATCCCCGTTTCTCCTCCAATCCAGGTTCTTGAAGCAAGCATTCCGGCTAATCCCAATGGAGGAG
GTGATCTGAGGTGAGATAA--------------------ATCCATCCAAGAAACCAAAAGGTA--AAAAAAGAGGAAGAG
AGAGAGAGATAAGAA----CCATCTTTGGTAGTTGTCGATGGCAGTCAATTTGCTCGTACAATTCGATTCCGTTGATCTG
TTTTTACAGAATTCTAAACTGTTGATGTTGGTTTTGTTGCTGTTCGTTTAAAAGCTATGGAATTGGTGTAGATAAGCTGT
GGTTTGTTATTGATCCGACGATCTGAATCTAGCTATAGCATCAGAATTGGGGTTTAAAAGGAACGTTTTTTCAGCTGAAC
CATCTCTTCCCCATGTTTGCATAGCCCAGAGCACACACATTATACTGAGACCAAGTAGTTGAGAAGCAGTGCTAGAGACC
AAAGCACGCACAAAAGCATGGCAGTGGAGTAGAGTAGAGTAGACGAGTTAAGCTTTTGCCTAGTGTCCAAAGTCACAATG
GCAAGCAATGTGCTTTGC------TCTGTGTCTGTGTTGTGTTGCCTCCTTTCTTTCGCTCCTTGAGTTGCTGCTGCCAT
ATGAACAGCAGCTGCTCGTACCCT----------TGTGTTCCTGTTTGTTCCCCACCACTATTTCTTTCATTAACCACCC
ATGCCTCTCTGCGCGTGGGCCCCAGCCACATACTCTG----CGTACGGTACTAGGTTGCAGAATTGCAGAGGTCATGGCC
ACTGAAATCAATC---GTATACGGATGATAACAGCCAGCCAACCAGCTAGCCA----TTCTTTGTTT------ATGGAGA
AACGGCAGTCGTTTTTGTAGGGCTCGGGCTCCACGTTTGGAGGCAGGCGGTTAGCATCTCGCCCCCACCGGTGGCGTCCA
CGTGTCGCCCCGCCCCAGT-----CGGAGGTTGGTGTGTGGTGGTGGTGGTGCTTCGAGTCCGGCCGGTCATTCAGGCCC
CCCGCTGATTCCGGGGGAAGGAATTAACACGGAATTAATCGCGCGGTTTAATGTGCGCGTAGCATTTTGACT
>chr6A_2
-GCTCCACTCTCCAAAGATGTGGCTCCATTTCTGCCACTACTTGGTGACACCCAACCCAACCCTCCAGGGTAGGTGGGAG
GGAGAGGGGTTGGTTTTAGGGAATGAGCAAAAGTAAAAGAATACATAATATGCCAAACTGGGACGATCTATCGCGTGCCC
ATGTGTTGGTGATCGAGAGGGGAAAAGGATTACGCTCATCTTTCGGTAGACACGCCATGAAAAACGTGGGAAAGGGGGAT
CATGTTAGGCAGCTGGTAGCCACACCGTGAAGAGTTGAGGAAAGAGAGGCCCGCTCACCTTCTGCCATGCACCCATGAAG
TCGAGGATTAGGTCACATTCACCCCATCGCAAGCACACCGTGAAGGGTTTGAGGAAAGGGGTCATGCTCACCTTGTGGCA
CGCAGATCGAATAATTTGTGTAACAAGTCACGCTCACTCTTAAAAGGCATGGTGTGATGAGTGCGTGGG------GAGGG
GGGGGGGAGT------TGTA------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------AAGGATGATAGTAATCGTCGTTTGTGGTTGC
GTGTGAATGGTTGATACTTGCATTCGACCGTCCACCTCCCTCTCATCAAAACAAAAAAAGTTGTTCGTTACACCGTGTTA
ACTTATTACTTTATACCATGCAGGTTACATAATTTTATTTATAATAACATAAAAAAAACCGGCATACGTATATCCCACAA
AAATAGAAAGCGATTTGCACGCAAGGAGTTAAGGCTGGAAAATATCAAGCTGCGCATCTGTGATTTGATATGCTGCGCCA
GAGCCAGGAAGCATAAAAAAGCCCCCAGG-CCCAGCAATGGAAAGTGTCAACGCGGAATTAAAAAGAAAACGTAGAAAAA
GG--AAAATAAGAATGGAAAAATAAATAGGAAGGAGAAGCTTGGCTGTTCCGCTATATTCTAACTTCCGCCGCAGC-TCT
CTCGTTTGCTCCCGTCCTCTCTCCTCGCCATTCTAGCTCCTGCCACGCTTTCCCCGAGCGAGCTCCCCAAGCTCTCGCCA
TGGCAAAGAACACATGCAAGCTCTGCTTCCGCCGCTTCGCCAGCCCCCGCGCCCTCGCAGGCCACATGCGCTCCCACTCC
GTCCGCAACCCGGCCGCGAAGCAGCAGATCTCATCGGCGTCCTCCGCGTCCACCTCCTTCAC------------------
CGCCGCCGCCGACGGCGACGTCAGCTTCAAGAAGCCCCTTCCAATCTACGCGCTCCGGGAGAATCCCAAGCGCAGCCTGC
GCGTCACCGATGTCGCCTTCTCGGATCGCGAGAGTGAGGCCGAGTCCACCC------CGCCGCACCCCAAGCGCGCGCAC
GCCGCCGCTGCCGGGGGCGAGACCGAGCCGCTGAGCTCGGTGTCGGACGCAGCCACGCCGGAGGAGGACGTGGCGCTGTC
CCTCATGATGCTCTCCCGCGACTCCTGGCCTTCGACGGGGCGCGGCTACGGCGA-------------------CGGCGAC
TACTCGGACGACGGGAGCGACGGCGGTTACACGCTCCCCGCTCCCGATCCG---GCGCCGGTGGAGAAGCGCACACGGTT
CCAGTGCGGCGCGTGCAAGAAGGTATTCCGTTCCTACCAGGCTCTCGGCGGCCACCGCGCCAGCCACGTGCGCGGCGGCA
GGGGCGGCTGCTGCGCGCCTCCCATCGCTCCCCCTCCTCCT---CCTCC---GCAGCCGCTGGCACCGGCGCCATTGATG
GAACGCGAGGGGGACGAGGACATGGACGGGAAGGGGTCGCCACGGGAGTGCCCCTACTGCTACCGCGTGTTCGCCTCCGG
GCAAGCTCTTGGTGGGCACAAGAGGTCCCATGTTTGCTCCGCCGCCGCCGCCGCAGCACAGGCGCATGCAGCCGC-----
-------CGCTCCTCCGGCGCCGATCAAAGCCTTTGGCATGATCGATCTGAACATCGCGCTGCCGTTCGAGGATGTGGAG
CTCTCTGCCGTGTCAGATCCCCGTTTCTCCTCCAATCCAGGTTCCTGAAGCAAGCATTCCGGCTAATCCCAATCGAGGAG
GTGATCCGAGGTGAGATAAATCTATCCATCCATCCATCCATCCATCCAAGAAACCAAAAGGTAGAAAAAAAGAGGAAGAT
AAACAGAGATAAGAAAGAACCATCTTTGGTAGTTGTCGATGGCAGTCAATTTGCTCGTAC-AGTCGATTCCGTTGATCTG
TTTTTACAGGATTTTAAACTGTTGATGTTCGTTTCGTTCCTGTTCGTTTAAAAGCTATGGAATTGGTGTAGATAAGCTGT
GGTTTGTTATTGATCCGACGATCTGAATTCAGCTATAGCATCAGAATTGGGGTTTAAAAGGAACGCTTTTTCAGCTGAAC
CATCCCCTCCCCATGTTCGCATAGCCCAGAGCACACACATTATACTGAGACCAAGTAGTTGAGAAGGAGTGCTAGAGACC
AAAGCATGCACAAAAGCATGGCAGTGGAGTAGAGTAGAGTAGACGAGCTAAGCTTTTGCCTAGTGTCCAAAGTCACAATG
GCAAGCAATGTGCTTTGCTCTGTGTCTGA------GTTGCGTTGCCTCCTTTCTTTCGCTCCTTCAGTTGCTGCTGCCAT
ATGAACAGCAGCAGCTGCTCGTA-------CCCTTGTGCTCCTGTTTGTTCCCCACCACTATTTCTTTCATTAACCACCT
ATGTCTCCCTGCGCGTGGGCCCCGGCCACACACTCCACGTACGTACGGTACTAGGTTGCAGAATTGCAGAGGTCATGGCC
GCTGGAATCAATCGTAGTATACGGATGATAACAGCCAGCCAACCAGCCAGCCAGCCGTTCTTTGTTTATGGAGATGGAGA
AACGGCAGTCGTTTTTGTAGGGCTCGGGCTCCACGTTTGGAGGCAGGCGGTTAGCGTCTCGCCCCCACCGGTGGCGTCCA
CGTGTCGCCCCGCCCCGCCCCAGCCGGAGGTTGGTGCGCGGTGGTGGTGGCGCTGCGAATCCGGCCGGTCATTCAGGCCC
CCCGCTGATTCCGGGGGAAGGAATTAACACGGAATTAATCGCGCGGTTTAATGTGCGCGTAGCGTTTT----
>chr6D_2
-GCTCCACTCTCCAAAGATGTGGCTCCATCTCCGCCACTACTTGGTGACACCCAACCCAAGCCTCCAGGGTAGGTGGGAG
GGAGAGGGGTTGGTTTTAGGGAATGAGCAAAAGTAAAAGAATACATAATATGCCAAATTGGGATAATCTATCGCGTGCCC
ATGTGTTGGTGATCGAGAGGGGCGAAGGATTACACTCATCTTTCGGTAGACACGCCATGAAAAACGTGGAAAAGGGGGGT
CATGCTAGGCAGCTGGTAGCCACAACATGAAGAGTTGAGGAAAGAGAGGCCCACTCACCTTCTGGCATGCACCCATGAAG
TCGAGGAGTAGGTCACGTTCACCCCATCGCAAGAACACCGTGAAGGGTTTGAGGAAAGGGGTCATGCTTACCTTGTGGCA
CGCAAATCGAATAATTTATGTAACAAGTTACGCTCACTCGTAAAAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGACGGTAGTAATCGTCGTTTGTGGTTCC
GTGTGAATGGTTGATACTTGCATTCGACCGTCCACTGCCCTCTCATCAAAACAAAAAAAGTTGCTCGTTACATCGTGTTA
ACTTTTTTTGACA-ACCATGCAGGTTACATAAATTTATT--TATAACAT--AAAAAAACTGGCATACGTATATCCCACAA
AAATAGAAAGCGATTTGCACACAAGGAGTTAAGGCTGGAAAATATCAAGCAGCACATCTGTGATTTGATATGCTGCGCAA
GAGCCAGGAAGCATAAAAAAAGCCCCAGGCCC-AGCAATGGAAAGTGTCAACGCGGAATTAAAAAGAAAACGTAGAAAAA
GGAAAAAATAAGAATGAAAAAATAAATAGGAAGGAGAAGCTTGGCTGTTCCGCTATATTCTAACTTCCCCCGCAGC-TCT
CTCGTTTGCTCCCGTCCTCTCTCCTCGCCATTCTAGCTCCTGCCACGCTTTCCCCGAGCGAGCTCCCCAAGCTCTCGCCA
TGGCAAAGAACACATGCAAGCTCTGCTTCCGCCGCTTCGCTAGCCCCCGCGCCCTCGCAGGCCACATGCGCTCCCACTCC
GTCCGCAACCTGGCCGCGAAGCAGCAGATCTCATCGGCGTCCTCCGCGTCCACCTCCTTCAC------------------
CGCCGCCGCCGACGACGACGTCAGCTTCAAGAAGCCCCTTCCAATCTACGCGCTCCGGGAGAATCCCAAGCGCAGCCTGC
GTGTCACCGATGTCGCCTTCTCGGATCGCGAGAGTGAGGCCGAGTCCACCC------CGCCGCACCCCAAGCGCGCGCAC
GCCGCCGCTGCGGGGGGCGAGACCGAGCCGCTGAGCTCGGTGTCCGACGCAGCCACGCCGGAGGAGGACGTGGCGCTGTC
CCTCATGATGCTCTCCCGCGACTCCTGGCCGTCGATGGGGCACGGCTACGGCGA-------------------CGGCGAC
TACTCGGACGACGGGAGCGACGGCGGTTACACGCTCCCCGCCCCCGATCCG---GCGCCGGTGGAGAAGCGTACACGGTT
CCAGTGCGGCGCGTGCAAGAAGGTATTCCGTTCCTACCAGGCTCTCGGCGGTCACCGCGCCAGCCACGTGCGCGGCGGCA
GGGGCGGCTGCTGCGCGCCTCCCGTCGCTCCTCCTCCTCCT---CCTCCCCCGCAGCCGCTGGCACCGGTGACATTGATG
GAACGCGAGGGGGACGAGGACATGGACGGGAAGGGGTCGCCACGGGAGTGCCCCTACTGCTACCGCGTGTTCGCCTCCGG
GCAAGCTCTTGGTGGGCACAAGAGGTCCCACGTTTGCTCCGCGGCCGCCGCCGCAGCACAGGCACATGCAGCCGC-----
-------CGCTCCGCCGGACCCGATCAAAGCCTTTGGCATGATCGATCTGAACATCGCGCTGCCGTTCGAGGAAGTGGAG
CTCTCTGCCGTGTCAGATCCCCGTTTCTCCTCCAATCCAGGTTCTTGAAGCAAGCATTCCGG-TAATCCCAATCGAGGAG
GTGATCCGAGGTGAGATAAATC------------CATCCATCCATCCAAGAAACCAAAAGGTTGAAAAAAAGAGGAAGAG
AAACAGAGATAAGAAAGAACCATCTTTGGTAGTTGTCGATGGCAGTCAATTTGCTCGTAC-ATTCGATTCCGTTGATCTG
TTTTTACAGGATTTTAAACTGTTGGTGTTCGTTTTGTTACTATTCGTTTAAAAGCTATGGAATTGGTGTAGATAAGCTGT
GGTTTGTTATTGATCCGACGATCTGAATCTAGCTATAGCATCAGAATTGGGGTTTAAAAGGAACGTTTTTTCAGCTGAGC
CATCTCCTCCCCGTGTTTGCATAGCCCAGAG--CACACACTATACTGAGACCAAGTAGTTGAGAAGCAGTGCTAGAGACC
AAAGCACGCACAAAAGCATGGCAGTGGAGTAGAGTAGAGTAGACGAGCTAAGCTCTTGCCTAGTGTCCAAAGTCACAATG
GCAAGCAATGTGCTTTGCTCTGTGTCTGTGTCTGTGTTGCGTTGCCTCCTTTCTTTCGCTCCTTGAGTTGCTGCTGCCAT
ATGAACAGCAGCTGCTCGTACCCTGCGCGTCCCCTGTGTTCCTGTTTGTTCCCCACCACTATTTCTCTCATTAACCACCC
ATGCCTCTCTGCGCGTGGGCCCCGGCCACATACCC----TACGTACGGTACTAGGTTGCAGAATTGCAGAGGTCATGGCC
ACTGAAATCAATC---GTATACGGATGATAACAGCCAGCCA--------GCCC----TTCTTTGTTT------ATGGAGA
AACGGCAGTCATTTTTGTAGGGCTCGGGCTCCACGTTTGGAGGCAGGCGGTTAGCATCTCGCCCCCACCGGTGGCGTCCA
CGTGTCGCCCCGCCCCGGCCGGAAGT------------------TGGTGGTGCTGCGAATTCGGCCGGTCATTCAGGCCC
TCCGCTGATTCCGGGGGAAGGAATTAACACGGAATTAATCGCGCGGTTTAATGTGCGCATAGCGTTTTGAC-
>chr2D_993
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-----------------------------------------------------------------------CTCTCGCCA
TGGCCAAGAACACATGCAAGCTCTGCTGCCGCCGCTTCGCCAGCCCCCGCGCCCTCGCCGGCCACATGCGCTCCCACTCC
ATCAAGGTCGCCCGGTC---GCAGCAGATCTCATCGGCCTCCTCCGCCTCCACCTCCCTCGCGGCCGGGGACGGCGACGA
CGCCAG---------------GATGGCCATCCAGGC---------CCACGTGCTCCGCGGCAAGCCCAAGCGGAGGGCGC
GCCTCGCCGAGTCCGACTTCTCGGATCGCGAGAGCGAGGCGGAGTACCCGTCGCAGTCGCCGGGCGCCAAGCGCGTGCAT
GGCGGATCGC------GCGACGCCGAGCCGGTGAGCTCCGTGTCCGACGCCGCCACGCCGGAGGAGGACGTCGCGCTGTC
CCTCATGATGCTCTCCCGCGACTCCTGGCC----------CGCGGTGGCGGCGTGGACGCCGTCCTCCTACCGCGTCGCC
GACTCCGACGACGGAAGCGACGGCGGCGGAGAGGCCGCGCCCGCGCCACCGGCTGCGGCCGAGCAGAAGCGGACGCGGTT
CCAGTGCCCGGCGTGCAAGAAGGTGTTCCGATCGTACCAGGCGCTGGGCGGGCACCGCGCCAGCCACGTCCGCGGCGGCA
GGGGCGGCTGCTGCGCGCCCCCGCTGAACCCGCCGCCGCCGCCGCCTCCCGCTTCCACCCAC---CTGCAGCCATTGCCG
GAATGCGAGGAGGGCACGAAGCC------TCATCCGCAC------GAGTGCCCCTGCTGCTCCCGCGTGTTCGCGTCAGG
GCAGGCCCTCGGCGGCCACAAGCGGTCCCAGCTCTGCCCAGGCGCCGCCGCCGTG---------------GC--------
----CGATCATCCCGCCGCCGCGATGAAAAGCCTGGGCCTCATTGATCTGAACCTCCCGGCGCCCTTCGAGGACCTGGAG
GTCTCCGCCGTGTCAGATCCC-----------------------------------------------------------
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>chr2B_993
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-----------------------------------------------------------------------CTCTCGCCA
TGGCCAAGAACACATGCAAGCTCTGCTGCCGCCGCTTCGCCAGCCCCCGCGCCCTCGCCGGCCATATGCGCTCCCACTCC
ATCAAGGTCGCCAGGTC------GCAGATCTCATCGGCCTCCTCCGCCTCCACCTCCGTCGCGGCCGGGGACG---ACGA
CGCCGCCGCCGACGCCAGGATGATGCCCATCCAGGC---------CTACGTGCTCCGCGGCAAGCCCAAGCGGAGGGTGC
GCCTCGCCGAGTCCGACTTCTCAGATCGCGAGAGCGAGGCGGACTACCCCTCGCAGTCGCCGGACGCCAAGCGCGTGCAT
GGCGGATCGC------GCGACGCGGAGCCGGTGAGCTCCGTGTCCGACGCCGCCACGCCGGAGGAGGACGTCGCGCTGTC
CCTCATGATGCTCTCCCGCGACTCCTGGCC----------CGCG---GCGGCGTGGCAGCCGTCCTCCTACCGCGCCGCC
GACTCCGACGACGGAAGCGACGGCGGCGGAGAGGTCGA------GCCCCGG---GCGGCCGAGCAGAAGCGGACGCGGTT
CCAGTGCCCCGCGTGCAAGAAGGTGTTCCGATCGTACCAGGCGCTGGGCGGGCACCGCGCCAGCCACGTCCGCGGCGGCA
GGGGCGGCTGCTGCGCGCCCCCGCTCAACCCGCCGCCGCCT---CCTCCTGCTTCCACCCAC---CTGCAGCCATTGCTG
GAATGCGAGGAGGGCACGAAGCC------GCATCCGCAC------GAGTGCCCCTGTTGCTTCCGCGTGTTCGCGTCAGG
CCAGGCCCTCGGGGGCCACAAGCGGTCCCAGCTCTGCCCAGGCGCCGCCGCCGTG---------------GCCGCGCCTG
GCGCCGATCATCCCGCCGCCGCGATGAAAAGCCTGGGCCTCATTGATCTCAACCTCCCGGCGCCCTTCGAGGACCTGGAG
GTCTCCGCCGTGTCAGATCCC-----------------------------------------------------------
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>chr2A_993
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-----------------------------------------------------------------------CTCTCGCCA
TGGCCAAGAACACATGCAAGCTCTGCTCCCGCCGCTTCGCCAGCCCGCGCGCGCTCGCCGGCCACATGCGCTCCCACTCC
GTCAAGGTCGCCCGGCC---GCAGCAGATCTCGTCGGCCTCCTCCGCGTCCACCTCCGTCGCGGCCGCGGACG---ACGA
CGCCAG---------------GATGGCCATCCAGGC---------CCACGTGCTCCGCGGCAAGCCCAAGCGGCGGGCGC
GCCTCGCCGAGTCCGACTTCTCGGATCGCGAGAGCGAGGCGGAGTACCCGTCGCAGTCGCCTGGCGCCAAGCGCGTGCAT
GCCGGATCGC------GCGACGCCGAGCCGGTGAGCTCCGTGTCCGACGCCGCCACGCCGGAGGAGGACGTCGCGCGGTC
CCTCATGATGCTCTCCCGCGACTCCTGGCC----------CGCGC------------CGCCGCCGTCCTACCGCGCCGCC
GACTCCGACGACGC---------------AGAGGCCGCACCCGCGCCCCCG---GCGGCCGAGCAGAAGCGGACGCGGTT
CCAGTGCCCGGCGTGCAAGAAGGTGTTCCGATCGTACCAGGCGCTGGGCGGGCACCGCGCGAGCCACGTCCGCGGCGGCA
GGGGCGGCTGCTGCGCGCCCCCGCTCAGCCCGCCTCCCGCG------------TCCACCCAC---CTGCAGCCATTGCCG
GAATGCGAGGAGGGCACGAAGCCGCCGCCGCATCCGCAC------GAGTGCCCCTGCTGCTCCCGCGTGTTCGCGTCGGG
CCAGGCCCTCGGCGGCCACAAGCGGCCCCAGCTCCGCCCAGCCGCCGCCGCCGTG---------------GCCGC-----
-------TCATCCGGCGGCCGCGATGAAAAGCCTGGGCCTCATTGATCTGAACCTCCCGGCGCCGTTCGAGGACGTGGAG
CTCTCCGCCGTGTCAGATCCC-----------------------------------------------------------
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------------------------------------------------------------------------
>SNPs
S------------------------S------------------------------------------------------
----------S--------------S----------------------------------------------S-----S-
------S------S----SS---------S--S---------------S-------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------S-S---
---------------S-----------------------S------S----------------S-----SSSSSS-----
S------SSSSSSSSS----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S--S--------------------
----------------------------------------------------------------------S---------
-----------------S-----S--------------------------------------------------------
-------------------------S------------------------------------------------S-----
-------------------------------------------------------S--------S---------------
-------S--------------------------------------------------------------------S---
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------S-----------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S----S---------------------------S-----S-----------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-------S-------------------------------------S--------------------------S-------
----------S---------------------------------------------------------------------
-----------------------S--------------------------------------------------------
-------------------------------------------------S-S----------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
------S-------------------------------------------------------------------------
-S-S--------------------------------------------------------S-------------------
---------S---S---------------S--------S-----------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
---------------------------------------S----------------------------------------
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-----------------------S-----------SS-------------------------------------------
-----------------------------------------------S--------------------------------
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----------------S-S-----------------S-S---------------S---S---------------------
---------------------------------------------------------------S-------S
>forward_470
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--------------------------------------------------GGTGTGATGAGTGTGTGGGT----------
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>reverse_1848
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-------AGCGCGTGCAAGAAGGTATT-----------------------------------------------------
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>forward_777
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-------------------------------------AGGGGGTGTGTAAAGGATGC-----------------------
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>reverse_2840
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---------------------------------------TGTTGCCTCCTTTCTTTCGC---------------------
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------------------------------------------------------------------------
