>input_sequence_64828
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--------------------------------------------------------ATGGCCCTCAAGAAAGCAAGAAAA
GCG---GTAGCACCCAAGAACCCAACGTCCGCCGCCGACGCTGGAGGCAGCGGCTCCACGGGCGCGGCGGAGATGCCCGG
TCCGCTCGGGCGCGGCGGCGCGCACAGCCTCAGCCCGCCGCGGCTGCCCCCCGGCGTCTACTTCAGCCCGACGCGGGAGG
AGAGCGTGGCGCTCCTCGACCGCTGGATCGC---CGGC---GGCAAGGAGGTGCCCGCCGACGCGCGGGGGTTCGTCTGC
CACGCCGACAT-CTACGGCGAGAGCCCCGACGCGCTGCGGCGGCGGCACCCGCCGGCGAGCGCCCGCGCGGGCCAGCACA
CCTGGTGGTTCCTCTGCGAGACCAGGTTCCAGTGCCCCGGCTCGGCGGC------CAAGCGCGCCGGCCGCAAAGTCGAC
ACCGGCGGGCACTGGCGGGCGGAGCGGAGCGAGG---------CCGAGGGGGGCGGGGTCGAGAGCCACTTCGTCTTCTT
CCT------------CGGCCCGTCCAG------GAAGGAGAAGACGCCGTGGCTGGTGCAGGAATTCACCAGCGCCAACG
ACGACGGCGCCGGCAAGAAGGGCGTGCCCGCGCTCTACATGCTCTACGTCTCCCCGCGCGCCACCGACGACGAGCTGAGG
GGGA-TCTACGGGGAGGACGGCGTCACGGTGGGGCCCGACGGGAACAAGAAGCATGTCCGGGCCGCCGTCCCAGCAGGCT
GTTTCGACGCCGTCGTGGCGCTGCTGCCGCCGGGGAGCGTCCGTGGTCTCGGTCAAGAGCGCGTTGAGGTGTCGCAGGCG
CCGCCTCCGCCGCAGCCGGCGTGTCTTCTTCATCACGACGGCCAGCAGGGGCAGAACTCCACGGGGGCCGCATCGCCGGC
GGG---------------------------------------------------------------------CGTTCTTG
GTCAGTACCAGCAGCGGCGGCGGCATGGGCGCTGCTTCATGGGGGCCGCAGTGCCGGCGGCCGTTCTTGGTTAG------
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>chr4D_1_TraesCS4D01G099900
AAATCTGAATTCCTTTGCCAAGGCAATTGCACCAGTATTGTCACAAAAGATTTTCATAGACCCGACCCAAGGCTAAATTT
TCTGTTACCTGTGATTGGATAGAAGAACCTTCTAGCGAGTTGATTCCTGTACTGAGTTATCTTACGTAAACCATCATCAC
AGCTTAATAAAGAGTGATCATGCTTTCAAAGAAAAGGAAAACCCAAGAACTTTTACTTGCAAGTGTACTGCAAACAAGCA
TGAATAGCCAAGCGGCTTGGGTTCACGTCGCCGGCCGGAATCTTCGCTCCGCCGCCGCCGCGAACAGAGGCCCCACTGGG
TCGCCCGCCGCTAGCCTGCGCCCTACTCGGTCCCAAGTCGGAAGAGCGCACGGCCGACCAAGTCAAGTTGTTCCGTTGCT
TTGGAAAGTTCCGACGCGGCTTTTTTGCTCCTAGGTGCATATGCATCATTGTCGAAAACACACATTTTGAAAAGTTGAAA
AATTCGGAACAAAAATCCCGCGTGTATATCCGGACATTTTATGTCCGTTCACAAGGTTTCGGTGAAAAACGACGTTTTTT
GTGGCTTGTGTAAAAAAAATAAAGAAATGCCTCGTGAATAGTTAGAATGAAGCATCAGAAATTGTCTTTTTTTACACAAG
CCACAAAAAACGTCGTTTTTCACCGAAACCTTGTGAACGGACATAAAATGTCCAGATATACACGCGGGATTTTTGTTCCG
AATTTTTTAACTTTTCGAAATGTGTATTTCGACAATGCGTGTATATGCACGTAGGAGCAGAAGGGAATATCCGAAAAAGG
AGAAACTAGATTTATAGTACATGCAAGGCTCTGGAGGCTGGAGGCGCTCACGCCGTCACGCGCCGTAGATCGCCCCAACA
TTGGGACCGGTCTCGGGACAAGGAGACAGAACAGAG---GCGCGTCCCCCAATAAACAAGCGGCACGCCCGC------CC
CATTCC--CTCCTCACACACAACACGCGCCGC-----CGACTCCCATCCCAATCCCATGGCCCTCAAGAAAGCAAGAAAA
GCG---GTAGCACCCAAGAACCCAACGTCCGCCGCCGACGCTGGAGGCAGCGGCTCCACGGGCGCGGCGGAGATGCCCGG
TCCGCTCGGGCGCGGCGGCGCGCACAGCCTCAGCCCGCCGCGGCTGCCCCCCGGCGTCTACTTCAGCCCGACGCGGGAGG
AGAGCGTGGCGCTCCTCGACCGCTGGATCGC---CGGC---GGCAAGGAGGTGCCCGCCGACGCGCGGGGGTTCGTCTGC
CACGCCGACAT-CTACGGCGAGAGCCCCGACGCGCTGCGGCGGCGGCACCCGCCGGCGAGCGCCCGCGCGGGCCAGCACA
CCTGGTGGTTCCTCTGCGAGACCAGGTTCCAGTGCCCCGGCTCGGCGGC------CAAGCGCGCCGGCCGCAAAGTCGAC
ACCGGCGGGCACTGGCGGGCGGAGCGGAGCGAGG---------CCGAGGGGGGCGGGGTCGAGAGCCACTTCGTCTTCTT
CCT------------CGGCCCGTCCAG------GAAGGAGAAGACGCCGTGGCTGGTGCAGGAATTCACCAGCGCCAACG
ACGACGGCGCCGGCAAGAAGGGCGTGCCCGCGCTCTACATGCTCTACGTCTCCCCGCGCGCCACCGACGACGAGCTGAGG
GGGA-TCTACGGGGAGGACGGCGTCACGGTGGGGCCCGACGGGAACAAGAAGCATGTCCGGGCCGCCGTCCCAGCAGGCT
GTTTCGACGCCGTCGTGGCGCTGCTGCCGCCGGGGAGCGTCCGTGGTCTCGGTCAAGAGCGCGTTGAGGTGTCGCAGGCG
CCGCCTCCGCCGCAGCCGGCGTGTCTTCTTCATCACGACGGCCAGCAGGGGCAGAACTCCACGGGGGCCGCATCGCCGGC
GGG---------------------------------------------------------------------CGTTCTTG
GTCAGTACCAGCAGCGGCGGCGGCATGGGCGCTGCTTCATGGGGGCCGCAGTGCCGGCGGCCGTTCTTGGTTAGTGCCAG
CAGCAGCCGGCGAAGACGGTCATGGGGGAACCGGAGTGGGAATCTTTGGAGGATATAGTTTGATCATGACGATCGAGTTC
GCCTACCTGAAAC------------------------------AAGGAAAGGATAGTTGATTACAGGACAGCGCC-----
----------AGAGGGACCGATTGATTGATCTGCTAGAAACAAACGATTTTTTGGTTGATTTTGGGGATTAATTTGTATA
TACTAGCAAAAAGACCCCTGCGTTGCAACGGAAGAAAAAATACCAAA--CGCTCTTGATTTACAAAAA--TGTTCTATAA
TCTAAAAATTTGTAGCTATTTCTTAAATAAATGAAGAGTTGTTAAAAAGGTTGTTAGAAAGATACATGATTTTTTAATCT
--AAAAAGGA---TTTTTTTT--GTC-TGGAAAAGAACATTTTTGTATGGTCTTCTGTTGACTCAGATACTTGCGCCCCT
ATTTCATCACTATTTCTTGCCATATATGTCATAGGTATTTGTCCTTGTTTTATCACTATTTATATCTTATCAAACTTGTC
TTTTATTTTATTTTTTGTCATGCATGCCTCCTTTTTACCTTTTTC-ATGCATGAC----CTTTTTTCTTCTTCTTATATA
TAGAGGAGAATAACGCAACATCTCATTTTTATCGGATCTCCTCTGCATTTTCTCTTTTATTTATTTTATAAAGGACATCC
CATCTTTATTGGTACCTTCTTTTATAGCGGACATTCCATCTTTATTAGGTCCTTCTTTTATTTCTTGTCATGCATGTCCT
TACTTATTGGGTGTCTCTAACAAGTTTATCTTCAATTTCATGTCCAATCCTGATATTGCTGAGGTGTTCGTCCCCGA-TC
TGAATCAGTACCGGTATG--AAAAAAAACCCGGATAATGCATTAGTGATTAACATTGCAGCCTAGATAGTAT-TTTTTAA
---ATTGTTAACAGATAAAATAACACCATATTCAGATTCTACATA-TTTTTCTAATCAAATTTCATATATAACATGTTAA
ATTTGGAGTTACGGTTTAGAAGAT
>chr4A_841
GAGGCTGG------------------------------------------------------------------------
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-----------------------------------------------TCACGCCGTCACGCGCCGTACATTTCCCCAACA
TTGGGAGTACGGGGCCGAACAG----------------AGCGCGTCCCCCAATAAACAAGCGGCACGCCCGC------CC
CAT-CCCGCTCCTCCCACACAACACACGCGGCGGGGAGGACTCCC------ATCCCATGGCCCTCAAGAAAGCAAGAAAA
GTGGTAGTAGCATCCAAGAAACCAACATCCGCCGCCAT---------------------GGGCGTGGCGGAGACGCCCGA
TCCGCTCGGGCGCGGCGGCGCGCACAACCTCAGCCCGCCGCGGCTGCCCCCCGGCGTCTACTTCAGCCCGACGCGGGAGG
AGAGCGTAGCGCTCCTCGACCGCTGGATCGCCGGCGGC---GGCAAGGAGGTGCCCGCCGACGCGCGGGGCTTCGTCTCC
CACGCCGACAT-CTACAGCGACGGCCCCGGCGCGCTGCGGCGGCGGCACCCGCCGGCGAGCGCCCGCGCGGGCCACG-CA
TCTGGTGGTTCCTCTGCGAGACCAGGTTCCAGTGCCCCGGCGCCGCGGC------CAAGCGCGCCGGCCGCAAAGTCGAC
ACCGGCGGGTACTGGCGGGAGGACCGGTGCAAGG---------CCGAGGGGGGCGGGTTCAAGAGCTACTTCGTCTTCTT
CCTCGGCCCCGGCCCCGGCCCGTCCAG------GAAGGAGAAGACACCGTGGGTGGCGCAGGAATTCACCAGCGCCAAGG
ACGACGGCGCCGGCAAGAAGGGCGTGCCCGCGCTCTACATGCTCTACGTCTCCCCGCGCGCCACCGACGACGAGCTGAGG
GGGA-TCTACGGGGAGGACGGCGTCACGGTGGGGCCCGACGGGGACAAGAAGCCTGTCCGGGCCGCCGTCCCGGCAGGCT
GTTTCGACGCCGTCGTGGCGCTGCTGCCGCCGGGGAGCGTCCGTGGTCTCGGGCAAGAGCGCGTCGAGGTGTCGCAGGCG
CCGCCTCCGCCGCAGCCGGCGTGTCATCTTCATCACGACGGCCAGCAGGAGCAGAACTCCACGGGGGCGGCATCGCGGGC
GGG---------------------------------------------------------------------CGTTCTTG
GTC---------------------------------------------------------------------AGTGCCAG
CAGCAGCCGGCGAAGACGGTCATGAC-------------------------GATATAGTTTGATCATGACGATCGAGCTC
GCCTACCTGAAAC-----------------------------------AAGGATAGTTGATTACAGGACAGCGGCACGTA
CGATT--------------GATTGATTGATCTGCTAGAAACAAACGATTTTTTGGTTGATTTGGGGGATTAATTTGTGTA
TA------------------------------------------------------------------------------
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>chr4B_882
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-TGGGACGGGTCTCGGGACGAGGAGACACAACAGAAGAAGCGCGTCCCCCAATAAACAAGCAGCACGCCCGCGGCCCGCC
CAT-CCCGCTCCTCCCACACAACATAAGCCGC-----GGACTCCC------CTCCCATGGCCCTCAAGAAAGCAAGAAAA
GTG---GTAGCATCCAAGAAACCAACATCCGCCGCCAT---------------------GGGCGTGGCGGAGACGCCCGA
TCCGCTCGGGCGCGGCGGCGCGCACAACCTCAACCCGCCGCGGCTGCCCCCCGGCGTCTACTTCAGCCCGACGCGGGAGG
AGAGCGTGGCGCTCCTCGACCGCTGGATCGC---CGGCGGCGGCAAGGAGGTGCCCGCCGACGCGCGGGGGTTCGTCTCC
CACGCCGACAT-CTACGGCGACAGCCCCGACGCGCTGCGGCGGCTGCACCCGCCGGGCAGCGCCCGCGCGGGCCAGCACA
CCTGGTGGTTCCTCTGCGAGACCAGGTTCCAGAGCCCCGGCGCGGCGGC------CAAGCGCGCCGGCCGCAAAGTCGAC
ACCGGCGGGTACTGGCGGGTGGAGCGGAGCGAGG---------CCGAGGGGGGCGCGGTCAAGAGCTACTTCGGCTTCTT
CCT------------CGGCCCGTCCAG------GAAGGAGAAGACGCCGTGGCTGACGCAGGAATTCACCAGCGCCACGG
ACGGCGGCGCCGGCAAGAAGGGCGTGCCCGCGCTCTACATGCTCTACGTCTCCCCGCGCGCCACCGACGACGAGCTGAGG
GGGA-TCTACGGGGAGGACGGCGTCACGGTGGGGCCCGACGGGAACAAGAAGCCTGTCCGGGCCGCCGTCCCGGCAGGCT
GTTTCGACGCCGTCGTGGCGCTGCTGCCGCCGGGGAGCGTCCGTGGTCTCAGGCAAGAGCGCGTTGAGGTGTCGCAGGCG
CCGCCCCCGCCGCAGCCGGCGTGTCTTCTTCGTCACGACGGCCAGCAGGGGCAGAACTCCACGGGGGCCGCATCGTCGGC
GGACCTTCTTGGTCAGTACCAGCAGCGGC------------------------------------CGGCGGCCGTTCTTG
GTC---------------------------------------------------------------------AGTGCCAG
CAGCAGCCGGCGAAGACGGTCAAAGGGTAACCGGAGTGGGAATCTTTGGAGGATCTGAGTT-------------------
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>chr4D_929
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---------------------------------------------------ATAAACAAGCGGCACGCCCGC------CC
CAT-CC--CTCCTCATACACAACGCACGCCGC-----CGACTCCCATCCCA--CCCATGGCCCTCTAGAAAGCAAGAAAA
GTG---GTAGCATCCAAGAACCCAACATCCGCCGCCGACGTCGGAGGCAGCGGCTCCACGGTCGCGGCGGAGATGCCCGG
TCCGCTCGGGCGCGGCGGCGCGCACAACCTCAACCCGCCGCGGCTGCCTCCCGGCGTCTACTTCAGCCCGATGCGGGAGG
AGAGCGTGGCGCTCCTCGACCGCTGGATCGC---CGGC---GGCAAGGAGGTGCCCGCCGACGCGCGGGGGTTCGTCTCC
CGCGCCGATAT-CTACGGCGAGAGCCCCGACGCGCTGCGGCGGCGGCACCCGCCGGCGAGCGCCCGCGCGGGCCAGCACA
CCTGGTGGTTCCTCTGCGAGACCAGGTTCCAGTGCCCCGGCTCGGCGGC------CAAGCGCGCCGGCCGCAAAGTCGAC
ACCGGCGGGCACTGGCGGGCGGAGCGGAGCGAGG---------CCGAGGGGGGCGGGGTCGAGAGCCACTTCGTCTTCTT
CCT------------CGGCCCGTCCAG------GAAGGACAAGACGCCGTGGCTGGTGCAGGAATTCACCAGCGCCAACG
ACGACGGCGCCGGCAAGAAGGGCGTGCCCGCGCTCTAC---------GTCTCCCCGCGCGCCACCGACGACGAGCTGAGG
GGGA-TCTTCGGGGAGGACGGCGTCACGGTGGGGCCCGACGGGAACAAGAAGCCTGTCCGGGCCGCCGTC----------
--------------GTGGCACTGCTGCCGGCTGGGAGCGTCCGTGGTCTCGGGCAAGAGCGCGTTGAGGCGTCGCAGGCG
CCGCCTCCACCGCAGCCGGCGTGTCTTCTTCATCACGACGGCCAGCAGGAGCAGAACTCCACAGGGGGCGCGTCGGCGGC
GGGCGTTCTTGGTCAGTACCAGCAGCGGCGGCGGCATGGGCGCTGCTTCATGGGGGCCGCATCGCCGGCGGCCGTTCTTG
GTC---------------------------------------------------------------------AGTGCCAG
CAGCAGCCGGCGAAGACGGTCATGGGGGAACCGGAGTGGGAATCTTTGGAGGATATAGTTTGATCATGACGAGCGAGTTC
GCCTACCTGAAACAAAGAAAGGATTTTTTTTTTTTTTGAGGGTAAGGAAAGGATAGTTGATTACAGGACAGCGGCACCGT
AGAGTACGCTAGAGGGGCCGATTGATTGATCTGCTAGAAACAAACGATTTTTTGGTTGATTTGGGGGATTAATTTGTATA
TA------------------------------------------------------------------------------
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>chr5D_999
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------------------------------------------------------CCATGGCCCTCAAGAAAGCGAGAAAA
GTAG---------CCAAGAAACCAACTTCCGACGACGACGCCGGAGCCAGCAGTTCCATGCCCCCTCCGCC---------
TCCTCCTGGGCCCGGTTGCGCGAGCAAACTCAAGCCGCTGCCGCTGCCCCCCGGCGTCTACTTCAGCCCGACGCATAAGG
AAAGCCTGGCGTTCCTCAACCAATGGATCGC---CGGC---GACAAGAATACGCCT---GACGCGCGGGGGTTCATCTTC
CACGCCGACAT-GTACGCCAACAACCCGTACGCGCTGCGGCAGCTGCACTCGCCGGCCAGCAGCCGCGCGGGCCAACACA
CATGGTGGTTCCTCAGCGAGAACAAGTTCCAGAGCCCGTCCGCGGCCAC------CAAGCGCGCCGACCGCAGCGTCCAG
ACCGGCGGATGCTGGCGGCTGGAGCAGGGCAAGGAGGAGCTGGAGCA----GGGCGGCTCAAGAACAGCTTCGGGTTCTA
CTT------------CGGCCCGTCCAA------GAAGTACAAGACGCCGTGGCTCATGCAAGAATTCACCAGCAACAAGG
ACAACGGCGCCGGCAAGAAGGGCGTGCCCGCGCTCCACAAGCTCTATGTCACACCGCGCACCACCAACGACAACCGGAGG
GCAA-TCTACGGGGAAAACGGCGTCACGGTGGGG---------AACAAGAAGCCTGTTCCGGCTGA------------CT
ATTTTCACGCTGCCGCCGCGCTACTGTCGCCGGGGAGTGCCCGTGGTCTCGGTCAAGAGCACGTTGGGCTGTCACAGGCG
TCACAGCCACCCCCGCCTGTGGGTCTTCTTCATTACGGCGGCCA------------------------------------
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>chr5D_1138
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------------------------------------GCCGCCGCTGCCTCTCGGCGTCTACTTCAACCCGACGAATGCGG
ACATCATGGGGTTCCTCAACCGGTGGATCGC---CGGT---GATGACAAGATGCCG---GACGCGCGGGGGTTCATCTTC
CACGCCGACATTGTACACCAACGACCACTATGCACTGCAGCAGCTTCACCCACCGGCCAGCGCCCGCGCGGGCCAGCACA
CCTGGTGGTTCCTCGGCGAGTCCAAGTTCTAGAGTCCGTGCGCGACGATCAAGAACAAGCGTGGCGACCGCAGCGTCCAG
ATCGGCGGGTACTTGCGGCTGGAGCAGACCAAGGAGGAGCTTCCCGAAGAGGGCAGGCTTAAGAATTGCTTCGGGTTCTA
CTG------------CGTCCCGTCCCCGTCCAAGAAGCGCAAGACGCCGTGGCTCATGCAGGAGTTCACCAGCGACAGCG
ATAGGGGCGCGGGCAGGAAGGGCGTGCCCGCGCTCCACAAGCTCTACGTCACGCCACACGCCGCCGTCGAGGGCCTGAGG
GGGAGTCTACGGGGAGGACGGCCTGACGGCGGGG----------------------------------------------
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>chr4D_2139
TTTTTATACAC---------------------------------------------------------------------
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---TAGCAAAAAGGCCCGTGCGTTGCAACGGGAGAAAAAATACCTTA--CGCTCTTGATTTACAAAAA--TGTTCTACAA
TCTGAAAATTTGTAGCTATTTCTTAAATACATGAAGAGTTGTTAAAAAGGTTGTTACAAAGATACAAGATTTTTTAATCA
--TAAAAAAA---------TT--GTC-TGGAAAAGAACATTTTTGTATGGTCTCGTGTTGACTTAGGTACTTGCGCCCCT
ATTTCATCACAATTTATTGCCATACATGTCATAGGTATTTGTTCCTGTTTTATCACCATTTATATCTTATCAAACCTGTC
TTTTATTTTATTTTTTGTCATGCATGCCTCCTTTTTACCTTTTTTCATGCACGTCCTCTCTTTTTTCTTCT-----TATA
TATAGGAGAATAGCACAACATCTTATTTTTATCGGATCTCCTCTGTATTTTCTCTTTTATTTATTTTATAGAGGACATCC
CATCTTTATTGGTACCTTCTTTTATAGCGGACATTCCATCTTTATTAGGTCCTTCTTTTATTTCTTATCATGCATGTCCT
TATTTATTGGGTGTCTCTAGTAAGTTTATCTTCAATTTCATGTCCAATCCTGATTT-GCTCAGGTGTTCATCCCCAA-AC
TGAATCAGTACTAGTATG--AAGAAAAAACCTGATAATGCATTAGTAATTAACATTGCAGCCTAGATAGTAT-TTTT-AA
---ATTGTTAATAGATAAAATAACATCATATTCAGATTCTACATATTTTTTCTAATCAAATTTCATATATAACATGTTAA
ATTTGGAGTTACGGTTTAGAAGAT
>chr4A_2139
TTTGTATG-AC---------------------------------------------------------------------
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---TAGCAAAAAGGCTAGTGCATTGCAACAGGAGAAAAAATACCACA--CGCTCTTAATTTACAAAAAA-TATTCTATAA
TCTGAGAATTTGTAGCTCTTTCTTAAATACATGAAGAGTTATTAAAAAGTTTGTTAAAAAGATACATGTTTTT--AATCA
--TAAAAGAG---GTTTTTTT--GTCTTGGAAAAGAACATTTATGGATGGTCTCCTGTTGATGCAGGTACTTGCGTCCCT
ATTTCATTACTATTTCTTGCCATACATGTTATAGGTATTGGTCCTTGTTTCATCACTATTTATATCTTATCAAACTTGTC
TTTTATTTTATTTTATGTCATGCATGCCTCCTTTTTACTTTTTTT-ATGCATGTCCTCTC-TTTTTCTTCT-----TATA
TATAGGAGAATAACGCAACATCTCATGTTTATCGGATCTCCTCTGTATTTTCTCTTTTATTTATTTTATATCGGACATCC
CATGTTTATTGGGTCCTTCTTTTTTAGCGGACATCCCATCTTAC-TGGATCCTTATTTTATTTCTTGTCATGCATGTCCT
TATTTATTGGGTGTCTTTAGCAAATTTATCTTCAATTCCATGTCCAATCCTGATTTTGCTGAGGTGTTCATCACCAA-TC
TGAATCAGTACCGGTATG--AAAAAAGA--CGGATAAGGCATTATTGATTAACATTGCAGTCTAGATAGTAT-TTTA-AA
---ATTGTTAATAGGTAAAATAACATCACATTTAGATTCTACATA-TTTTTCCAATCAAATTTCATATATAACATGTTAA
ATTTGGAGTTACGGTTTAGAAGAT
>chr1D_2144
ATA------AC---------------------------------------------------------------------
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---TAGCAAAAAGGCACGTGCGTTGCAACGGGAGAAAAAATACCACA--CACTCTTAATTTACAAAAAA-TGTTCTATAA
TCTGAG-ATTTGTAGTTATTTCTTAAATACATGAAGAGTTGTTAAAAG------------GATACATGATTTTTTAATCA
--TAAAAAGA---GTTTTTTT--GTC-TGAAAAAAAATATTTTTGTATGGTCTCCTATTGACGCAGGTACTTTCGCCCCT
ATTTCATCACTATTTCTTGACATACATGTCATAGGTGTTGGTCCCTGTTTCATCACTATTTATATCTTATCAAACTTGTC
TTTTATTTTATTTTTT-TCATGCGTGCCTCCTCTTTACTTTTTTTCATGCATGTCCTCTTTTTCTTCTTCT-----TATA
TATAGGAGAATAGCACAACATCTCATCTTTATTGGATCTCCTCTGCATTTTATCTTTTATTTATTTTATAGCGGCCATCC
CATCTTTATTGGGTCCTTCTTTTATAGCGGACATTCCATCTTTATTGGGTCCTTCTTTTATTTCTTATCATGCATGTTCC
TATTTATTGGGTGTCTCTAGCAAATTTATCTTCAATTTCATGTCAAATCCTGATTTTGCTGAGGTGTTCATCCCCAA-TC
TGAATCAGTACCGGTATG--AAAGAAAA--TGGATAATGCATTATTGATTAACATTGCAGCCTAGGTAGTAT-TTTTT-T
TAAATTATTAACAGGTAAAATATAATCATATTCAGATTCTACATA-TTTTTCTAATCAAATTTCATATATAACATGTTAA
ATTTGGAGTTACGGTTTAGAAGAT
>chr6A_2145
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------------------------------------------------------------------------------TA
TACTAGCAAAAAGGCCCATGCATTGCAACGGGAGAAAAAATACCACA--CGCTCTTGATTTACAAAAAA-TATTCTATAA
TCTCAAAATTTGTAGCTATTTTTAAAATACATGAAGAGTTGTTAAAAAAGTTGTTAGAAAGATACAACATTTTTTAATCA
--TAAAAAGG---ATTTTTTTTGGTC-TGGAAAAGAACATTTTTGTATGGTCTCCTGTTGACTCAGGTACTTGCGCCCCT
ATTTCATCACAATTTCTTGTCATATATGTCATATGTATTTGTCCCAGTTTTATCACTATTTATATCTTATCAAACTTGTC
TTTTACTTTATTTTTTGTCATGCATGCCTCCTTTTTACCCTTTTTCATGCGTGTCCTCTCTTTTTTCTTCT-----TATA
TACAGGAGAATAGTGCAACATCTCATTTTTATCGGATCTCCTCTGCATTTTATCTTTCATCTATTTTATAGAGGACATCC
CATCTTTATTGGTACCTTCTTTTATAGCGGACATTCCATCTTTATTAGGTCCTTATTTTATTTCTTGTCATGCATGTCCT
TATTTCTTGGGTGT-TCTAGCAAGTTTATCTTCAATTTCATGTCCAATCCTGATATTGCTGAGGTGTTAATCCCCAA-GC
TGAATTAGTACCGGTATGAAAAAAAAAA--CGGATAATGCATTAGTGATTAACATTGCAGCCTAGATAGTAT-TTTTT-T
---ATTGTTAACAGATAAAATAACATCATATTCAGATTCTACATA-TTTTTCTAATCAAATATCATATATAACATGTTAA
ATTTGAAGTTATGGTTTAGAACAT
>chr5D_2147
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TACTAGCAAAAAGGCCTGTGTGTTGCAACGGGAGAAAAAATACCACA--CGCTCTTGATTTACA-AAAA-TATTCAATAA
TCTGAAAATCTGTAGCTATTTCTTAAATACATGAAGAGTTGTTAAAAAGGTTGTTAGAAAGATACAGGATGTGTTAATCA
TAAAAAAGAA---TTTTTTTT--GTC-GGGAAAAGAACATTTTTGTATGGTCTCCTATTGACTCAGGTACTTGCGCCCCT
ATTTCATCACTATTTCTTGCCAAACATGTCATAGGTATTTGTCCCTGTTTTATCACTATTTATATCTTATCAAACTTATC
TTTTATTTTATCTTTTGTCATGCATGCCTCCTTTTTACCCTTTTTCATGCATGTCCTCTTTTTCTTCTTCT-----TATA
TATAGGAGAATAACGCAACATCTCATTTTTATCGGATCTCCTCTGCATTTTCTCTTTTATTTATTTTATAGAGGACATCC
CATCTTTATTGGTACCTTCTTTTATAGCGGCCATTCCATGTTTATTAGGTCCTTCTTTTATTTCTTGTCATGCATGTCCT
TACTTATTGGGTGTCTCTAGCAAGTTTATCTTCAATTTCATATCCAATCCTGATATTGCTAAGGTGTTCGTCCCCAA-TC
TGAATCAGTACCGGTATG--AAAAAAA-CCCGGATAACGCATTAGTGATTAACATTGCAGCCTAGATAGTATTATTTT-A
---ATTGCTAACAGATAAAATAACATCATATTCAGATTTTACATA-TTTTTCTAATCAAATTTCATATATAACATGTTAA
ATGTGAAGTTACGGTTTAGAAGAT
>chr3D_2147
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TACTAGCAAAAAGGCCCGTGCGTTGCAACGGGAGAAAAAATACCACACGCGCTCTTGATTTACA-AAAAATGTTCTATAA
TCTGAAAATTTGTAGCTATTTCTTAAATATATGAAGAGTTGTTAAAAAGGTTGTTAGAAAGATACAGGATTTTTTAATCA
--TAAAAAAGATTTTTTTTTT--GTC-TGGAAAAGAACATTTTTGTATGGTCTCCTGCTGACTCAGGTACTTGCTCCCCT
ACTTCATCACTATTTCTTGCCATACATGTCATAGGTATTTGTCCCTGTTTTATCACTATTCATATCTTATC---------
-----------TTTTAGTCATGCATGCCTCCTTTTTACATTTTTTCATGCATGTCCTCTCTTTTTTCTTCT-----TATA
TATAGGAGAATAGCGCAACATCTCATTTTTATCAGATCTCCTCTGCATTTTTTCTTTTATTTATTTTATAGAGGACATCC
AATATTTATTGGTACCTTCTTTTATAGCGGACATTCCATCTTTATTAGGTCCTTGTTTTA-TTCTTGTCATGCATGTCCT
TATTTATTGGGTGTCTCTAGCAAGTTTATCTTCAATTTCATGTCCAATCCTGGTATTTCTGAGATGTTCATCCCCAA-TT
TGAATCAGTACCGGTATG--AAAAAAA-TCCGGATAATGCATTAGTGATTAACATTGCAGCCTAGATAGTATTTTTTCAA
---ATTGTTAACAGATAAAATGACATCATATTCAGATTCTACATA-ATTTTCTAATCAAATTTCATATATAATATGTTAA
ATTTGGAGTTACAGTTTGAAAGAT
>chr1D_2148
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-ACTAGAAAACATGCCCGTGCGTTGCAATGGGAGAAAAAATACCACA--CGCTCTTAATTTACA-AAAAATATTCTATAA
TCTGAGAATTTGTAGCTATTTCTTAAATACATGAAGAGTTGTTAAAAAGGTTGTTAAAAAGATACATGTTTTTTTAATCA
--TAAAAGGA---GGTTTTTT--GTCTTGGAAAAGAACATTTATGTATGGTCTCCTGTTGACGCAGGTACTTGCGTCCCT
ATTTCATGACTATTCCTTGCCATACATGTCATAGGTATTGGTCCCTGTTTCATCACTATTTATATCTTATCAAACTTGTC
TTTTATTTTATTTTATGTCATCCATGCCTTCTTTTTACTTTTTTTCATGCATGTCCTCTATTTCTTCTTCT-----TATA
TATAGGAGAATAGCGCAACATCTCATCTTTATCGGATCTCCTCTGCATTTTCTCTTTTATTTATTTTATAGCGGACATCC
CATGTTTATTGGGTCCTTCTTTTATAGCGGACATCCCATCTTTATTGGATCCTTCTTTTATTTCTTGTCATGCATGCCCT
TATTTATTGGGTGTCTCTAGCAAATTTATCTTCAATTTTATGTCCAATCCTAATTTTGCTGAGGTGTTCATCCCAAAATC
AGAATCAGTACCGGTATG--AAAAAAGA--CGGATAATGCATTATTGATTAACATTGCAGTCTAGATAGTAT-TTATA-A
---ATTGTTAATTGGTAAAATAACATCATATTCAGATTCTACATA-TTTTTTCAATCAAATTTCATATATAACATGTTAA
ATTTGGAGTTACGGTTTAGAAGAT
>chr3B_2148
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-ACTAGCAAAAAGGCATGTGCGTTGCAACGGGAGAAAAAATACCACA--CGCTCTTAATTTACA-AAAAATATTCTATAA
TCTGAGAATTTGTAGCTATTTCT-AAATACATGAAGAGTTGTTAAAAACGTTGTTAAAAAGATACATG-TTTTTTAATCA
--TAAAAAGA---GTTTTT----GTCTTGGAAAAGAACATTTATATATGGTCTCCTGTTGACGCGGGTACTTGTGTCCCT
ATTTCATCACTATTTCTTGCCATACATGTCATAGGTATTGGTCAATGTTTCATCACTATTTATATCTTATCAAACTTGTC
TTTTATTTTATTTTATGTCATGAATGCCTCCTTTTTACTTTTTTTCATGCATGTCCTCTTTTTCTTCTTCT-----TATA
TATAGGAGAATAGCGCAACATCTCATGTTTATCAGATTTCCACTGCATTTTCTCTTTTATTTATTTTATAACGGACATCC
CATGTTTATTGGGTCCTTCTTTTATAGCGGACATCCCATCTTTATTGGATCCTTCTTTTATTTTTTTTCATGCATGTCCT
TATTTATTGGGTGTCTCTAGCAAATTTATCTTCAATTTCATGGCAAATCCTGATTTTGTTGAGGTGTTCATCCCCAA-TC
TGAATCAGTACCGGTATG--AAAAAAGA--TGGATAATGCATTATTGATTAACATTGCAGCCTAGATAGTAT-TTTTA-A
---ATTGTTAACAAGTAAAATAGCATCATATTTAGATTCTACATA-TTTTTCCAATCAAATTTCATATATAACATGTTAA
ATTTGGAGTTACAGTTTAGAAGAT
>SNPs
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S--SS--------
-------S-----------S--------S------S--------------------------------------------
---S---------------------S------------------------------------------------------
-S----------S-------------S--------------S--------------------------------------
--------------------------S-----------------------------------------------------
------------------------------------------------------------------------------S-
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-----------------------------------------------------S------------------S-------
--------------------------------------------------------------------------------
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---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
----------------S---------------------------------------------S-----------------
-------------S---S-------------S-------------S----------------------------------
---S-------------------------S-------------------------------------------------S
-----------------------------------------------------S------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------S--------S-----------------SSSSS----
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-------------------------------------------------------S----
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
------------------------
>forward_76
--------------------------------------------------------TAGACCCGACCCAAGGCTAA----
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>reverse_2062
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-------------------------------------------------------------CGTTCTTGGTTAGTGCCAG
C-------------------------------------------------------------------------------
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>forward_784
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--------------------------------------------ATGCACGTAGGAGCAGAAGG----------------
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>reverse_2065
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----------------------------------------------------------------TCTTGGTTAGTGCCAG
CAGC----------------------------------------------------------------------------
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------------------------
>forward_1067
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-------TAGCACCCAAGAACCCAACG-----------------------------------------------------
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>reverse_2234
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-------------------------------------------------------------------------CCAGAGG
GACCGATTGATTGA------------------------------------------------------------------
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------------------------
