>input_sequence_64820
--------------------------------------------------------------------------------
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-----------------------------------------------------ATGGCTTCCGACGGCGTGGTGGCCCTG
TACGGCAACAACAAGGCGGTGGTGGAGCCCTCCGCCAAGCCTGCCGCCGCCACCTTCTCCGTCAAGGTGGGCCTCGCCCA
GATGCTGCGCGGCGGCGTCATCATGGACGTGGTCACCGCCGAGCAGGCGCGCCTCGCCGAGGAGGCCGGCGCCTGCGCCG
TCATGGCGCTGGAGCGCGTGCCCGCCGACATCCGCGCCCAGGGCGGCGTGGCCCGCATGTCCGACCCGGCCCTCATCCGC
GACATCAAGCGCGCCGTCACCATCCCGGTGATGGCCAAGGCCCGCAT---------------------------------
---------------CGGGCACTTCGTGGAGGCCCAGATCCTGGAGGCCATCGGCGTGGACTACGTGGACGAGAGCGAGG
TCCTGACCCTCGCCGACGATGCCCACCACATCAACAAGCACAACTTCCGCGTCCCCTTCGTGTGCGGCTGCCGCGACCTG
GGGGAGGCGCTCCGCCGCATCCGCGAGGGCGCCGCCATGATCCACACCAAGGGCGAGGCCGGCACCGG----TAACGTGG
TGGAGGCCGTCCGCCACGTCCGCTCCGTGATGGGCGCCGTCCGCGC----------------------------------
--------------------------------------------------------------------------------
------------CCTGCGCAACATGGACGAGGACGAGGTCTTCAGCTACGCCAAGCAGATCGCCGCCCCGTACGACCTGG
TGATGCAGACCAAGCAGCTGGGCCGCCTCCCGGTGGTGCAGTTCGCCGCCGGCGGCGTGGCCACCCCCGCGGACGCCGCC
CTGATGATGCAGCTCGGGTGCGACGGGGTGTTCGTCGGCTCCGGCATCTTCAAGAGCGGCGACCCGGCGCGTCGCGCCCG
CGCCATCGTGCAGGCCGTGACGCACTACAGCGACCCGGAGATCCTGGCCAACGTCAGCGCGGGGCTCGGGGAGGCCATGG
TGGGGATCAACCTGTCCGACCCCAACGTGGAGCGCTTCGCCGCCCGATCCCAGTAG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr4A_1_TraesCS4A01G178700
AAGAATGGCCTCCTTATCCATGTCAATGAAGTGCTCATCTAACTTGGCTTGATTCCAGGATGCCGAGCTGTGATCAACAA
GTTCTGAAACCAAACGAGGTGGGTTCGCTGACTTTGAGCAGATAGGTTTCAATAGGTAATCACGAGGTATCCAATTATCA
AGCCATATGTTAGTGTTCTCCCCCATACCAATCCTTTTAATAAGACCAAGCTTGAGAGTATCTCTGCCTTCCAAAATTGA
TCGCCATACCTGAGAGGGGTAATTTCCCAATTCCGCCTGTAAGATGGAGCATGTGGGGTAGTAAACAGCCTTGAGAATCC
GGACACTCAAGGACGTAGGGTCCTGAAGTAAGCGCCATGCTTGGCGAGGAAGTAGCGCCAAATTGAAGAGCTCGATGTCA
CGGAATCCCATACCGCCCATGAACTTTGGTTGAGTCATAACTTTTCAAGAAACCCAAGTTGTCTTTCTTTCGCCTTTCCT
TGAATCCCACCAAAATTTGCGGAGTAGCCCATTGGTATGTTGATAAAGCCCTCTTGGAAGCTTAAAGCATGCCATCGAAT
AGGTGGGAATTGCCTGTGCAACAGACTTGATGAGAACTTCCTTACCCCCAACCAAAAGCACCTTCTCCATCTGGACTTGT
TTTCAGATCCTATCTTTTAGATATTTGAAAGAATTCTCCTTTGCACGCCCAACATCAGAAGAGTATTTTTCAGAGAGCTT
TTCATTTTGTACATTCAGTACATGCTTGATTTCCAGCACGTTGGTTCGCTTTGGGCAACCGAGATGATGGCTAGGATA--
---AAATTGGATTGTTGGACCGGAAGGAATGGCCCATTAGCCCGG--------CTGTCTCCGCGTGTCCAGTTGCAAGTC
AAGTCCAGCTCCACTTCTCCTCTACCACTCCACTAGAGCAGAACCACATCTCATCCATCCCCAACCCCAGCCCCAAACCC
CCCAAAGTGGAAGAGAAGATTGTTGCGGCGGCGGATCGGAGTGAGAAGAATCAATGGCTTCCGACGGCGTGGTGGCCCTG
TACGGCAACAACAAGGCGGTGGTGGAGCCCTCCGCCAAGCCTGCCGCCGCCACCTTCTCCGTCAAGGTGGGCCTCGCCCA
GATGCTGCGCGGCGGCGTCATCATGGACGTGGTCACCGCCGAGCAGGCGCGCCTCGCCGAGGAGGCCGGCGCCTGCGCCG
TCATGGCGCTGGAGCGCGTGCCCGCCGACATCCGCGCCCAGGGCGGCGTGGCCCGCATGTCCGACCCGGCCCTCATCCGC
GACATCAAGCGCGCCGTCACCATCCCGGTGATGGCCAAGGCCCGCAT---------------------------------
---------------CGGGCACTTCGTGGAGGCCCAGATCCTGGAGGCCATCGGCGTGGACTACGTGGACGAGAGCGAGG
TCCTGACCCTCGCCGACGATGCCCACCACATCAACAAGCACAACTTCCGCGTCCCCTTCGTGTGCGGCTGCCGCGACCTG
GGGGAGGCGCTCCGCCGCATCCGCGAGGGCGCCGCCATGATCCACACCAAGGGCGAGGCCGGCACCGG----TAACGTGG
TGGAGGCCGTCCGCCACGTCCGCTCCGTGATGGGCGCCGTCCGCGC----------------------------------
--------------------------------------------------------------------------------
------------CCTGCGCAACATGGACGAGGACGAGGTCTTCAGCTACGCCAAGCAGATCGCCGCCCCGTACGACCTGG
TGATGCAGACCAAGCAGCTGGGCCGCCTCCCGGTGGTGCAGTTCGCCGCCGGCGGCGTGGCCACCCCCGCGGACGCCGCC
CTGATGATGCAGCTCGGGTGCGACGGGGTGTTCGTCGGCTCCGGCATCTTCAAGAGCGGCGACCCGGCGCGTCGCGCCCG
CGCCATCGTGCAGGCCGTGACGCACTACAGCGACCCGGAGATCCTGGCCAACGTCAGCGCGGGGCTCGGGGAGGCCATGG
TGGGGATCAACCTGTCCGACCCCAACGTGGAGCGCTTCGCCGCCCGATCCCAGTAGCTTCATACCTTGTTGCCAAGTTGG
TGCCATGGATCGTCGTCGTAATAACTTGAATCTGGCTTTGCATCATGTGTCGTTTTGTTCCTCTACTCTAGGTGCATCAT
CATGTATTATCCAGCAGAACTATCTTGGGTGTTGGTTGCCAGTTGAGATCAGCCGAGGGATTTTGCTCTTCAAGTGCTAT
GCTCTCGTTTGATGTTGGTTGCCCGTGTTTGTCCCAAACTGGAGTGTGGAGATTGATTGTTTTGTTGGAGATGGCGAAAA
TGACTGGTCTTGGCGTTGGTTTCCCTGGCCTGACCAGACAACAAAATCCCCGTTTC--CTCTTCTTACACCTACTCCCTC
CGTTCTTTTTCAACTTTGAAAGTCAAACTTTTTATGTTTGATCATATTTATACAATAATAGATAAACATTTATGCCATCA
AATTAGTAGCATCAGCTTTACGATAAAATATATTTTCGTCATATATCTATTTGATTTCATAAACATTAACATGTTCTTGC
ATAAACTCGATCAAACTTTAAGATAGTTTGACCCTCCAACAAAGTTGAAAGTACATTTCTTTTATAAAGATGGATAAAGT
ATGTACTATCCCACGTCTAGATATATCTATTTGGACGGCAAGTAATGGATAAAGTATGTACTATCCCACGTCTAGATATA
TCTGTTTGGATGGAGGAACTACTTGA---------------------------TTACAGCTTAACCAGGTGCGTCCAACG
CTAGT------------------------------------------GGTTTCCCGTGCTGTTGGGTTGCTGCTGGATGC
ACCTACCGC-CCCGGCAAGGCGGTCCCGTCAGAAAGCAGGATTACTCGTG---CAGG--CCCTCTCTTTCA------ATG
GCCCATGATTTCTTTCCTTTTTTGTGGGCAAATGGTCCATGCTTTCCATCCATTAGCATGGACAAACCA-ATTCATTAAT
TGAACGCACCAACCATAAATACTGTG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GTTGATCAGCTGCTCACGATTATAAGTAACAACTAAGAAGCTCAGCTGAGCACATTGGTGGATATGCTGGCAGG
>chr3A_219
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TATCTCTGCCCTCTATAATT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------CATCACCATACCTATGAGGGATAATTCCCCAAGTCCGCCTCTAAAATAGGGCATGTGGGGTAGTAA
ACAGCCTTGAGAATCCGGGCACTCAAGGAGGTAGGTTCCTGAAGTA----------------------------------
--------------------------------------------------------------------------------
------------------------------GCCGCCATGCTTGGCGAGCTAGTAGCACTAAATTGAAGAGCTCAATGTCA
CGGAATCCCATGCCTCACATGAACTTTGGTTGAGTCATAACTTCCCAAGAAACCCAAGATGTCTTCCTTTCGCCTTTTCT
TGAACCTCACCAAAACATGCGAAGAAGGCCATTGATATGGTGCCAAAATCCCCTTGGATGTTTAAAGCATGCCATCGAAT
ATGTAAGAATAACCTGGGCAACAGACTTGACGAGAACTTCTTTACCTCCAGCAGAGAGTGCCTTCTCCACCTAACCCT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GGACCTGTTTCCAGATACTATCTTTAAGATGTTTGACG
GAACGCTCCTTCGCTCACCCAACATCAGAAGGGAGACCCAAGTACTTCTCCGAAAGCTTCTCATTTTGTACATCAAGTAC
CTGCTTAATTTCC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr4D_754
CAGCACAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GTTGGTTCGCTTTAGGCAACCGAGATGATTGTTGGGATAAA
ATGAAATTGGATTGTTGGACCGGAAGGAATGGCCCATTAGCCCGG--------CTGTCTCCGCGTGTCCAGTTGCAAGTC
AAGTCCAGCTCCACTTCTCCTCGACCACTCCACTAGAGCAGAACCACATCTCATCCATCCCCAACCCCAGCCCCAAACCC
CCCAAAGAGGAAGAGAAGATTGTTGCGGCGGCGGATCGGAGGGAGAAGAATCAATGGCTTCCGACGGCGTGGTGGCCCTG
TACGGAAACAACAAGGCGGTGGTGGAGCCCTCCGCCAAGCCTGCCGCCGCCACCTTCTCCGTCAAGGTGGGCCTCGCCCA
GATGCTGCGCGGCGGCGTCATCATGGACGTGGTCACCGCCGAGCAGGCGCGCCTCGCCGAGGAGGCCGGCGCCTGCGCCG
TCATGGCGCTGGAGCGCGTGCCCGCCGACATCCGCGCCCAGGGCGGCGTGGCCCGCATGTCCGACCCGGCCCTCATCCGC
GACATCAAGCGCGCCGTCACCATCCCGGTGATGGCCAAGGCCCGCAT---------------------------------
---------------CGGGCACTTCGTGGAGGCCCAGATCCTGGAGGCCATCGGCGTGGACTACGTGGACGAGAGCGAGG
TCCTGACCCTGGCCGACGACGCCCACCACATCAACAAGCACAACTTCCGCGTCCCCTTCGTGTGCGGCTGCCGCGACCTG
GGCGAGGCGCTCCGCCGCATCCGCGAGGGCGCCGCCATGATCCGCACCAAGGGGGAGGCCGGCACCGG----CAACGTGG
TGGAGGCCGTCCGCCACGTCCGCTCCGTGATGGGCGCCGTCCGGGC----------------------------------
--------------------------------------------------------------------------------
------------CCTGCGCAACATGGACGAGGACGAGGTCTTCAGCTACGCGAAGCAGATCGCCGCGCCGTACGACCTGG
TGATGCAGACCAAGCAGCTGGGCCGCCTCCCGGTCGTGCAGTTCGCCGCCGGCGGCGTGGCCACCCCCGCGGACGCCGCC
CTGATGATGCAGCTCGGGTGCGACGGGGTGTTCGTCGGCTCCGGCATCTTCAAGAGCGGGGACCCGGCGCGTCGCGCCCG
CGCCATCGTGCAGGCCGTGACGCACTACAGCGACCCGGAGATCCTGGCCAACGTCAGCGCCGGGCTCGGGGAGGCCATGG
TTGGGATCAACCTGTCCGACCCCAACGTGGAGCGCTTCGCCGCCCGATCCCAGTAGCTTCATACCTTGTTGCCAAGTTGG
TGCCATGGATCGTCGTCGTAATAACTCGAATCTGGCT-TGCATCATGTGTCGTTTTGCTCCTCTACTCTAGGTGCATCG-
--TGTATTATCCAGCAGTACTATCTTGGGTGTTGGTTGCCAGTCGAGATCAGGTGAGGGATTTTGCTCTTCAAGTGCTAT
GCTCGAGTTTGATGTTGGTTGCCCGTGTTTGTCCCAAACTGGAGTGTGGAGATTGATTGTTTTGTTGGAGATGGCGAAAA
TGACTGGTCTT-GCGATGGTTTCCCTAACCTGACCAGACAACAAAATCCCCATTTCCTCA--TCTTACACCTA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TGTACTATCCCACGTCTAGATATATCTGTTTGGGCGGCAAGTAAT----------------------------------
----TTTGCACGGAGGAAGTACTTGA---------------------------TTACAGCTTAACCAGATTCCTACACGC
TACTTGTACTGT---AGCAATGCTCGGTAGTACTAGCAAACTCTAGCGGTTTCCCGTGCTGTTGGGTTGCCGCTGGATGC
GCCTACCGGCAAGGCCAAGGCGGTCCCGTCAGAAAGCAGGATCACTCGTGGTGCAGGCCCCCTCTCTTTCA------ATG
GCCCATGATTTCTTTCCTTTTTTGTGGGCAAATGGTCCATGCTTTCCATCCATTAGCATGGACGAACCA-ATTCATTAAT
TGGACGCACCAACCATAAATACTGTGGTTGATCAAAGTTTTGATGATTAGCATATTGCCGTTGATATGGCTGTGTGCATA
TAGAGGTCGGCTGTGGGGGGTAAACTGGGGGAGACTTGTATAGGATCTGTTTTTAGGTGAGATCAATGAGATCAA-----
------------------------------------------------------------TCATTTTGAAGATACAAAAC
ATGTTAAAAAATTCTGGAAAAATTTGAAGACATACATCCATGTTTGATGTACGAGCTCAAAAGGTTTCAGCTCCCAAATC
GAACTACACTTAGAGAAACAAAAAAGACAAAATCAGATGTGAATAGTGTCAAGTACTCCCTCCGTAAACTAATATAAGAG
CGTTTAGATTACTAGTGATCTAAACGCTCTTATATTGGTTTACGGAGGGAGTACTATTCATCCCAAAGCTGATACTATTC
ATAATCGAATTTGTCTTTTTCGAATCGCTAACTGTAGATCGAGTTTTGAGCTGATTTTTTTTTGGAGTTGTAGACATACC
CGGTAGGTATGTTGTATATTTTTTTCAGATTTTTTTGGATTGTCTAAATATGAAATATTTGAGTTGATCCTATGATCTCA
CCTAAAAGGCTGATCCTATACAAGTCTTCCCCGGAGTAAACTTGTTCGTCAATAAAAACGCACAAAGACATACTCCAACA
GTTAATCAGCTGCTCACGATTATAAGTAACAACTAAGAAGCTCAGCTGAGCACATTGGTGGATAAGCTGGCAGG
>chr4B_770
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TTTAGGCAACCGAGATGGATG---GGATA--
---AAATTGGATTGTTGGACCGGAACGAACGGCCCATTAGCCCGGCACTCTCTCTGTCTCGGCGTGTCCAGTTGCAAGTC
AAGTCCAGCTCCACTTCTCCTCGACCACTCCACTAGAGCAGAACCACATCTCATCCATCCCCAACCCCAGCCCCAAACCC
CCCAAAGAGGAAGAGAAGATTGTTGCGGCGGCGGATCGGAGGGAGAAGAATCAATGGCTTCCGACGGCGTGGTGGCCCTG
TACGGCAACAACAAGGCGGTGGTGGAGCCCTCCGCCAAGCCTGCTGCCGCCACCTTCTCCGTCAAAGTGGGCCTCGCCCA
GATGCTGCGCGGCGGCGTCATCATGGACGTCGTCACCGCCGAGCAGGCGCGCCTCGCCGAGGAGGCCGGCGCCTGCGCCG
TCATGGCGCTGGAGCGCGTGCCCGCCGACATCCGCGCCCAGGGCGGCGTGGCCCGCATGTCCGACCCGGCCCTCATCCGC
GACATCAAGCGCGCCGTCACCATCCCGGTGATGGCCAAGGCCCGCAT---------------------------------
---------------CGGGCACTTCGTGGAGGCCCAGATCCTGGAGGCCATCGGCGTGGACTACGTGGACGAGAGCGAGG
TCCTGACCCTCGCCGACGAGGCCCACCACATCAACAAGCACAACTTCCGCGTCCCCTTCGTGTGCGGCTGCCGCGACCTG
GGCGAGGCGCTCCGCCGCATCCGCGAGGGCGCCGCCATGATCCGCACCAAGGGGGAGGCCGGTACCGG----CAACGTGG
TGGAGGCCGTCCGCCACGTCCGCTCCGTGATGGGCGCCGTCCGCGC----------------------------------
--------------------------------------------------------------------------------
------------CCTGCGCAACATGGACGAGGACGAGGTTTTCAGCTACGCCAAGCAGATCGCCGCCCCGTACGACCTGG
TGATGCAGACCAAGCAGCTCGGGCGCCTCCCGGTCGTGCAGTTTGCCGCCGGCGGCGTGGCCACCCCCGCGGACGCCGCC
CTGATGATGCAGCTCGGGTGCGACGGGGTCTTCGTCGGCTCCGGCATCTTCAAGAGCGGCGACCCGGCGCGTCGCGCCCG
CGCCATCGTGCAGGCTGTGACGCACTACAGCGACCCGGAGATCCTGGCCAACGTCAGCGCCGGGCTCGGGGAGGCCATGG
TGGGGATCAACCTGTCCGACCCCGGCGTGGAGCGCTTCGCCGCTCGATCCCAGTAGCTTCATACCTTGTTGCCAAGTTGG
TGCCATGGATCGTCGTCGTAATAACTCGAATCTGGCT-TGCATCATGTGTCGTTTTGTTCCTCTACTCTAGGTGCATC--
-ATGTATTATCCAGCAGTACTATCTTGCGTGTTGGTTGCCAGTTGAGATCAGCTGAGGGATTTTGCTCTTCAAGTGCTAT
GCTCTCGTTTGATGTTGGTTGCCCGTGTTTGTCCAAAACTGGAGTGCGGAGATTGATTGTTTTGTTGGAGATGGCGAAAT
TGACTGGTCTTGGTGTTGGTTTCCCTAGCCTGACCAGACAACAAAATCCCTGTTTC--CA--TCTTACACCTA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TGTACTATCCCACGTCTAGATATATCTGTTTGGGCGGCAAGTAAT----------------------------------
----TTTGCACGGAGGAACTACTTGATTACATACCGTACTAGTAAACGGAGGATTACAGCCTCACCAGATTCCTACCCGC
TACTTGTAGCAACGAAGCTCTGCTCGGTAGTACTAGTAAACACTAGTGATTTCCCGTGCTGTTGGGTTGCCGCTGGATGC
GCCTACCGCCCCGGGCAAGGCGGTCCCATCAGAAAGCAGGATCACTCGTGGTGCAGG--CCCTCTCTTTCTTGGACGATG
GCTCATGATTTCTTTCCTGTTTTGCGGGGAAATGGTCCATGCTTTCCATCCATTAGCATGGACAAACCAAATTCGTTAAT
TGGACGCACCAACCATAAATACTGTGGTTGATCA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr2D_1082
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TTCTCTGTCAAGGTGGGCCTGGCCCA
GATGCTCCGCGGCGGCGTCATCATGGACGTCGTCAACGCCGAGCAGGCGCGCATCGCCGAGGAGGCCGGCGCCTGCGCCG
TCATGGCGCTCGAGCGCGTCCCCGCCGACATCCGCGCCCAGGGCGGCGTCGCCCGCATGTCCGACCCGGGCCTCATCCGC
GAAATCAAGCGCGCCGTCACCATCCCTGTCATGGCCAAGGCCCGCAT---------------------------------
---------------CGGGCACTTCGTCGAGGCCCAGATCCTCGAGTCCATCGGCGTCGACTACGTGGACGAGAGCGAGG
TCCTCACGCTCGCCGACGACGCCCACCACATCAACAAGCACAACTTCCGCGTCCCCTTCGTCTGCGGCTGCCGCAACCTG
GGCGAGGCCCTCCGCCGCATCCGCGAGGGCGCCGCCATGATCCGCACCAAGGGCGAGGCCGGCACCGG----CAATGTCA
TCGAGGCCGTCCGCCACGTCCGCTCCGTCATGGGCGACGTGCGTGC----------------------------------
--------------------------------------------------------------------------------
------------CCTCCGCAGCATGGACGACGACGAGGTATTCACCTATGCCAAGAGCATCGCCGCACCGTACGACCTCG
TCATGCAGACCAAGCAGCTCGGCCGCCTGCCCGTCGTCCAGTTCGCCGCCGGCGGGGTCGCCACGCCGGCCGATGCGGCC
CTCATGATGCAGCTCGGCTGCGACGGTGTCTTCGTCGGCTCCGGTGTCTTCAAGAGCGGCGACCCCGCGCGCCGCGCGCG
CGCCATCGTGCAGGCCGTCACCCACTACAGCGACCCTAATGTGCTCGCCGAGGTGAGCTGCGACCTCGGTGAGGCCATGG
TGGGCATCAACCTCTCCGATCCCAAGGTCGAGCGCTTTGCGGCGCGCTCCGAGT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr2B_1082
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TTCTCTGTCAAGGTGGGCCTGGCCCA
GATGCTCCGCGGCGGCGTCATCATGGACGTCGTCAACGCCGAGCAGGCGCGCATCGCCGAGGAGGCCGGCGCCTGCGCCG
TCATGGCGCTCGAGCGCGTCCCCGCCGACATCCGCGCCCAGGGCGGCGTCGCCCGCATGTCCGACCCGGGCCTCATCCGC
GAAATCAAGCGCGCCGTCACCATCCCAGTCATGGCCAAGGCCCGCAT---------------------------------
---------------CGGGCACTTCGTCGAGGCCCAGATCCTCGAGTCCATCGGCGTCGACTACGTGGACGAGAGCGAGG
TCCTCACGCTCGCCGACGACGCCCACCACATCAACAAGCACAACTTCCGCGTCCCCTTCGTCTGCGGCTGCCGCAACCTG
GGCGAGGCCCTCCGCCGCATCCGCGAGGGCGCCGCCATGATCCGCACCAAGGGCGAGGCCGGCACCGG----CAATGTCA
TCGAGGCCGTCCGCCACGTCCGCTCCGTCATGGGCGACGTGCGTGC----------------------------------
--------------------------------------------------------------------------------
------------CCTCCGCAGCATGGACGACGACGAGGTATTCACCTATGCCAAGAGCATCGCCGCACCGTACGACCTCG
TCATGCAGACCAAGCAGCTCGGCCGCCTGCCCGTCGTCCAGTTCGCCGCCGGCGGGGTCGCCACGCCGGCCGATGCGGCC
CTCATGATGCAGCTCGGCTGCGACGGTGTCTTCGTCGGCTCCGGTGTCTTCAAGAGCGGCGACCCCGCGCGCCGCGCGCG
CGCCATCGTGCAGGCCGTCACCCACTACAGCGACCCTAATGTGCTCGCCGAGGTGAGCTGCGACCTGGGTGAGGCCATGG
TGGGCATCAACCTCTCCGATCCCAAGGTCGAGCGCTTTGCGGCGCGCTCCGAGT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr2A_1082
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TTCTCTGTCAAGGTGGGCCTGGCCCA
GATGCTCCGCGGCGGCGTCATCATGGACGTCGTCAACGCCGAGCAGGCGCGCATCGCCGAGGAGGCCGGCGCCTGCGCCG
TCATGGCGCTCGAGCGCGTCCCCGCCGACATCCGCGCCCAGGGCGGCGTCGCACGCATGTCCGACCCGGGTCTCATCCGC
GAAATCAAGCGCGCCGTCACCATCCCGGTCATGGCCAAGGCCCGCAT---------------------------------
---------------CGGGCACTTCGTCGAGGCCCAGATCCTCGAGTCCATCGGCGTCGACTACGTGGACGAGAGCGAGG
TCCTCACGCTCGCCGACGACGCCCACCACATCAACAAGCACAACTTCCGCGTCCCCTTCGTCTGCGGCTGCCGCAACCTG
GGCGAGGCCCTCCGCCGCATCCGCGAGGGCGCCGCCATGATCCGTACCAAGGGCGAGGCCGGCACCGG----CAATGTCA
TCGAGGCCGTCCGCCACGTCCGCTCCGTCATGGGCGACGTGCGTGC----------------------------------
--------------------------------------------------------------------------------
------------CCTCCGCAGCATGGACGATGACGAGGTATTCACCTATGCCAAGAGCATCGCCGCACCGTACGACCTCG
TCATGCAGACCAAGCAGCTCGGTCGCCTGCCCGTCGTCCAGTTCGCCGCCGGCGGGGTCGCCACGCCGGCCGATGCGGCC
CTCATGATGCAGCTCGGCTGCGACGGTGTCTTCGTCGGCTCCGGTGTCTTCAAGAGCGGCGACCCCGCGCGCCGCGCGCG
CGCCATCGTGCAGGCCGTCACCCACTACAGCGACCCTAATGTGCTCGCCGAGGTGAGCTGCGACCTGGGTGAGGCCATGG
TGGGCATCAACCTCTCCGATCCCAAGGTCGAGCGCTTTGCGGCGCGCTCCGAGT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>SNPs
S--S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S--S-S----SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S---------------S-S-S-------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-------S---------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--S----------------------------------------S----------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------S----------S----------------------------------------SS
S----------------S-----------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------S--------------------------------SSS-----------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S---------------------------S-----S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS----S-S---------------------------------------------------------S-S-S-S--SSS
SSSS------------------------------------------------------------------S---------
S-----------S-----------------------------S-------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S------------------------------------------------------------S---------
>forward_79
-----------------------------------------------------------ATGCCGAGCTGTGATCAACA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_1460
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TGCCCACCACATCAACAAGC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_432
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CCGCCCATGAACTTTGGTTG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_2427
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GGCCTGACCAGACAACAAAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------
