>input_sequence_64792
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-------------------------------------------------------------------------ATGAAGA
CATACATGGCTGCCATCCTGCTGGTGCTTTCCCTCGCCGGTCGCCTCTCCGCCGCCGCCGCCGCCGCCGCCGCCGACAAG
GTGGACGCCGTTATTCGTCTCCCGAGCCCCGGTACGTAACTGTGTCACTATTCGATCCACAAGATATACAGTCCATCTCT
CCGCGGGAAATACACTTTGGTTTCTGGTTGTATATGCACCCTATACGGAGATTTTTTTAAATATTTAATAAAAAGTCAAA
ATAGGTAAGAACTATTTTGACAAAACACTTGACTTACTTTTGCACTGATATATAAATGTCGACGAAAAAAAAGTTGACCT
CACAGCAAAAAAGACAAAATTTATTTGCTATTATAGGTCACTATTCACACTATTTTAGCCAAAAATTTATCTTTTTTAAA
AAGAAGTCAAAAGGATATTATTTTTTTGGATTTTATTTCTCACGAGTACAATAGAAGGTCAAGTTTATTTCAAAAATATT
TTCAGAAATTTTTGACTTTTTGTTGAATTACTATTTTTTTTCTCATATACGGTGCATATGTCCCCATAGACCAAAAGTTC
CCCTCCATCTCTGCGCATTGCTATTACTTTCTTCGTTCCATAATATAAATGCGTCTTTTAAGTGAGTAGTATGTATGTGG
TGCAAATACTCCTATTTATGTAACGGGTGAGTGCAGGTCCAGGGGTTGCTGGCGCCGGTGAAGCGACGGCGGCCGTGAAG
GATTTT---GGGCGGCCGAGCTGCTGTGACCGGGAGCGGTGCGGCGGGACCCTGCGGGTGTGTCACTGCGATGATATGTT
CGACCGCAAGTGCCCCGCCACCTGCCTGGAGTGCGTGTCCTTG------------GGCCCATCCCACCACTACTGCGGGG
ACAGTTACATTGCTGGCCCCGTGCCCAGGTGCACCAAGGTTGGCCGCAACGGCGACATCTCCGGCGGTAACTAG------
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>chr3D_1_TraesCS3D01G027700
GGCCTCCTCCAGCAGCCACACATCCATTCCTCCACCTCCCCCGCTGCCAGCGCCGGCCGTGGAGGAAGATGTGTCCACGC
CGACAGCCACCGCCTCTAACATGTTCGACGAAATGTCGCAAAGGTATACATTTTGCAGTTGTGCTCTCGTTTGTTGTTTC
AAATTTTTG--------------------------------------------AGCTTTCATGCACGCAACAAATGTGGC
AAATGT--------------------------------------------------------------------------
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----------------------------------------------------------------GAAAAACTTCAATTGA
GACGATGCTCTTTTAGTAGACGAATTTGATACTATGATGGTGATGCACTTTTGATTAAAACTATGAT---GATGATGCAT
TTTATTTTCAAATTTTAGTTGCTATTTCAATGCAAAACCGCGGCTGAACAGTGGCTGCCAGCAGCC-CGCGGCCGTTTTC
ATATTGTTTTTCATCTTCATTTTGGACCATCTATTGGAGTTGCAAATTTGAACCATTATTTTGGACAATCCGTTGGAGTT
GAGCTTTTTTCGGATCTCCAAAACGCATTTTTTGGCGGACCAAATTTTACATTTCGAATTTTAGACCGCCAAATTTTGAA
CCATCTATTGAAGATGCTCTTAGGTTAACTAGCGCATAGGTAGGAGTGATCATCGAGTTAAAACTCAGAAGTACCAGTGT
ACTGATCCGTCGGTGGCTAAG-----------------------------------------------------------
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----------GCAAGCATGCACGCCACCGTCATCTACGCATATATGCGTGCA--GGTGCAGGCCACGTACGAGATGCTTG
CATGCCCCGACGCGTTCACGTGGATT-CTGATTCGCTGCACGTTTTGCGAGCAACGCACATGATGAAACCCTAGGCGGCC
CCATACATGCATGCACCATGCGCGTGCATGAGT----GATCGTGTTCAAATTCAAATGCTGCGGGATTCTAAAAACGAAA
ACGAAAGATCAACGCTTGGGAGTACAGTACAGTAGATGGCATTGAGATGCACCATAGCTGCCGGGGCTATAAATACGT--
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-----GACCGGTGACTGGAAGTTTCATTCACCCAAGAGCAACAGCTAGCTGACTGA----CCGGCCGGCGGCGATGAAGA
CATACATGGCTGCCATCCTGCTGGTGCTTTCCCTCGCCGGTCGCCTCTCCGCCGCCGCCGCCGCCGCCGCCGCCGACAAG
GTGGACGCCGTTATTCGTCTCCCGAGCCCCGGTACGTAACTGTGTCACTATTCGATCCACAAGATATACAGTCCATCTCT
CCGCGGGAAATACACTTTGGTTTCTGGTTGTATATGCACCCTATACGGAGATTTTTTTAAATATTTAATAAAAAGTCAAA
ATAGGTAAGAACTATTTTGACAAAACACTTGACTTACTTTTGCACTGATATATAAATGTCGACGAAAAAAAAGTTGACCT
CACAGCAAAAAAGACAAAATTTATTTGCTATTATAGGTCACTATTCACACTATTTTAGCCAAAAATTTATCTTTTTTAAA
AAGAAGTCAAAAGGATATTATTTTTTTGGATTTTATTTCTCACGAGTACAATAGAAGGTCAAGTTTATTTCAAAAATATT
TTCAGAAATTTTTGACTTTTTGTTGAATTACTATTTTTTTTCTCATATACGGTGCATATGTCCCCATAGACCAAAAGTTC
CCCTCCATCTCTGCGCATTGCTATTACTTTCTTCGTTCCATAATATAAATGCGTCTTTTAAGTGAGTAGTATGTATGTGG
TGCAAATACTCCTATTTATGTAACGGGTGAGTGCAGGTCCAGGGGTTGCTGGCGCCGGTGAAGCGACGGCGGCCGTGAAG
GATTTT---GGGCGGCCGAGCTGCTGTGACCGGGAGCGGTGCGGCGGGACCCTGCGGGTGTGTCACTGCGATGATATGTT
CGACCGCAAGTGCCCCGCCACCTGCCTGGAGTGCGTGTCCTTG------------GGCCCATCCCACCACTACTGCGGGG
ACAGTTACATTGCTGGCCCCGTGCCCAGGTGCACCAAGGTTGGCCGCAACGGCGACATCTCCGGCGGTAACTAG----CG
TCGCCGCCGATGCCCGGCCTTAGCATTGCACCGGGTG--------------------ATGGTGAATCCAATGAAGTGAGC
CGGCCGGTGG-------GCGAGTGGACAGAGTGAATCGCTATGCCAGCG-TTGTTCACCCGTTGTGGTCGCTCTTTCCCA
CATTT---------TTTCTTCCTTTCTTTCTTTCC------GGTTGTTGCTGTAACGCTAGTTTAATTGCACCGATGAAT
AAGATGAGCTGTGTTGATCAGATTGTCGTGCCAGTTTTGGTTCCGTTGAAGACCTCGAGTTCGAGGTGCTCAATGAGGTG
CGGCTACCATTTGTCCTTGGTTCCAGCTTCACCCCCCTGCAT--------GGTTGACTGCGATCTTTTTTAGTTTGCGTC
TTAACTTTTTTTGGTTT--------------CAAGTGCGTACCATGTAGGCAGCACTTTGGTGCTCCCCCAACCATCCAC
ATAGTTAAATTTGAATGAAG------------------------------TTGTTGGTGTGCGCCACAATCACCCACTGA
AAGCTAGGACACGTTTCGTTACCTGCATACAGCCCAAACAGGCCCGCGCGGGAAGAAAAAAGTCTGTTTGGTTGCATACA
GGGAGGCCTGGCTAGGAGGA-CACAAACCTTAAAGCAACCCAGAGCTTGGCTCGCTGGGAACGCTCAAATCTGCCATTTA
TAGCAAGCTAGGTTGAGCCGGATGCAAAGTGGGGCATGACGTACACCATAGTGTAGGGGGGATCGGGGCGTAGATGGCGG
GAGAAGGAAATCCCCGGACGCGAAATGGCACAGAATCTAACCTCACTCCACTGCATGGTTGCATGGTCGTCTGTGTCTTA
CATTTTTTTGGTTTTAATATCCGGGCATGTATCATACGTCAGCCTGTACTTTAGTATCAAAAATAGAATTGGGGTTCATG
TCCGACCGACCGACTAACAGAACTTTCTAAAGTAGCAGAAGGAAGGTCCTTTCAAACTGCATCGCGGTTGATACAGCTCC
ATGTAATAATTCTACACGATGAATTACATGCCCGGCCAACACGGTCAACTCCAT
>chr6D_1
GGCCTCCTCCAGCAGCCACACATCCATTCCTCCACCTCCCCCGCCGCCACCGCCGGCCGTGGAGGAAGATGTGGCCATGC
CGACGGCCACCGCCTCCAACATGTTCGACGAAATGTCGCAAAGGTATAAATTTTGCGTTTGTGCTCTCGTTTGTTGTTTC
AAATTTTTTGTGTCCTTGATTGTTTGTGCGTGCAATTGTAGTGTTGATGATGAAGCTTTCATGCACGCAACAAATGTGGC
AAATGATGATTACATATATGAGTCACAAGAATATGAAACCCAATATGATGATGACAATCTTGATGTGGATGATGAGGGCT
TCATTGTCAAGGGAAGAAGCGGCAATTATAGCACCGGGGAGGATGTGTTGATATGCACCGCTTGGAAGAAAATCTCTCAA
GATGCAAGCGTTGGAAGCGACCAAACGATGAGCACCTATTGGAAACGCATCAAGGAGTATTTCGATGAGCGCAACACAAG
TGGTATCTTCCGTTCGAGCGACTCTCTACGCCAACGTTGGTCCACCATCAACGCCGAATGCTCAAAGTGGGCCGGTTGCT
TGTCAAATGTTGCTCGCATGAACCCAAGTGGTTGCGGTGATAGTGATTTGGTAAATATTTCCTCTTCGTCCGTGCTTTGT
CAAATATTTCCTCTTTGTTCACTATGTTGATGATGAAATGTTTTATTGTAGAAAATGATTGCACAAGGATTGTTTCAGGA
GAGGAACATGAAAAGCGAGAAGAAGAAAAGGAAAGGAAAAGCTTTCACTTTTCATCATTGCTACAAAGAGCTCAAGGATG
TGGAGAAGTGGAAAACTAGAGAGACTTTTGAATCGTCGAAGAAGAAGAGTGTGTTGGTTGTGGATGAAGAAGATGTCGCC
ATTGAGGAGACGAGCCCCACTCCTCACTCCGCGACAAAATCTTATAGGCCCAATGGAAACAAGAAAGCGAAGGGAACCAA
GGCCGGAGACAATGATCTCAAGGAAGGATTTGATGCCATTGTCATGGCAAGGAAAGAGTATGCCGACGAGAAAAGAATGT
TGAAGCTCAAGGAAATAGAGGAGAGGAGTGAGGCCGAGCGGTGAAGGGCGGCGGCCGAGGAGAAGAGGGCGGCAGCCGAG
GAGAGGTTGGCCGCGGCCGAGGACAGGAAGGTGGACCTAGAGGAGAAGAAGTCCGCGGCCGACGAGAGGAAGATGGTAGA
AGAGAGGACACTCAAGTTTATGTTTATGGACACATCAACTCTTGATGCCAAGGCAAATGCATATGTTGAACTTTGTCGCG
ATGAAATGCTCACGAAGAAGCAAATGCTCATGAGGCAAATGATGATGGGAGGAGGCATGGGAGGAGGCACATGGGAGATG
CCATGGGTGGTGCCATGGGTGGTGCCATGGGTGGTTACATGAACATGATTGGAGGTTCCATGAGTGGTGCATTTGGCGGA
AACATAGGAGGTGGCTTCGGTGGCAACATGGAAGGTGGCTTTGGCGGCATGGGAGGTGGCTTTGGCGGCATGGGAGGTGC
TTTTGGTGGCAACATGATGGGTGGCTTGGAAGGTGGCTATGGCGGCAACATGAGTGGCGTTGGAGGTGGATATGGCGGCA
ACATGGGACGAAATGAAGATGGTTCCGGTGGTGCTCACGGCAACGAGAGTTCACCGCTTATTGAGAACGTCGACAAAGAC
CTTATTTTAAGTTCAGAGAATCCGCCTTCACCCTTCGGAGAAAACATGGTGGTGGTGGAGATGATGATCATACCACGGTT
CACAACATCGGTGGAGTTGATGACCCGAATGAGTAATATTCATGTGCATTTGAATTTCTAGGGCGAAAAACTTTGATTGA
GACGATGCTCTTTTGGTAGACGAATTCGATACTATGATGGTGATGCACTTTTGATTAAAACTATGATGATGATGATGCAT
TTTATTTTCAAATTTTAGTTGCTATTTCAATGCAAAACCGCGGCTGAACAGTGGCTGGCAGCAGCCGCGCGGCCGTTTTC
ATATTGTTTTACATCTTCATTTTGGACCATCTATTGGAGTTGCAAATTTGGACCATCATTTTGGACCATCTGTTGGAGTT
GAGATTTTTTCGGAGCTCCAAAACGCACTTTTTGGCGGTCCGAATTTTACATCTTCGGTTTTGGACCGCCAAATTTTGGA
CCATCTATTGGAGATGCTCTTA----------------------------------------------------------
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>chr6A_170
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-----------------------------------------------------AGCTTTCATGCACGCAACAAATGTGGC
AAATGATGATTACATATATGAGTCACGAGAATATGAAACCCAATATGATGATGACAATCTTGATGTGGACGATGAGGGCT
TCATTGTCCAGGGAAGAAGTGGAAATTATAGCACCACGGAGGATGTGTTGATATGCACCGCTTGGAAGAAAATCTCTCAA
GATGCAAGCGTTGGAAGCGACCAAACGGTGAGCACCTATTGGAAACGCATCAAGGAGTATTTCGATGAACGCAACACAAG
TGGTATCTTCCGTGCGAGCGACTCTCTACGCCAATGTTGGTCCACCATCAACGCTGAATGCTCAAAGTGGGCCGGTTGCT
TGTCAAACGTTGCTCGCATGAACCCAAGTGGTTGCGGTGATAGTGATTTGGTAAATATTTCCTCTTTCTCCGTGG-----
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------------------------------------------------------------------------------TG
CCATGGGTGGTGCCATGGGAGGTGCCATGGGTGGTTATATGAACATGATTGGAGGTTCCATGTATGGTGCATTTGGCGGA
AACATGGGAGGTGGCTTCGGTGGCAAT---------------------ATGGAAGGTGGCTTTGGCGGCATGGGAGGTGC
TTTTGGCGGCAACATGATGGGTGGCTTGGGAGGTGGCTATGGCGGCAACATGAGTGGCGTTGGAGGTGGATATGGCGGCA
ACATGGGACGCGATGAAGATGGTTTCGGTGGTGCTCACGGCACCGAGAGTTCACCGCTTGTTGAGAACGTCGACAAAGAC
A--------------------------------------------------GTGGTGGAGATGATGATCGTACCATGGTT
CAAAACACCGGTGGTGTTGATGACCCGCATGAGTAATATTCATGTGCATTTCAATTTCTAGAGCGAAAAACTTTGATTGA
GACGATGCTCTTTTGGTAGACGAATTTGATACTATGATGGTGATGCACTTTTGATTGAAACTATGATGATGATGCAC---
TTTATTTTCAAATTTTAGTTGCTATTTCAATGCAAAACCGCGGCTAAACAGTGGCTGGCAGCAGCCGCGCGACCGTTTTC
ATATT-TTTTACATCTTCATTTTAGATCATCTATTGGAGTTGCAAATTTGGACCATCAATTTGAACCATCTATTGGAGTT
GAGCTTTTCTCGAAGCCGCAAAACGCACTTTTTGACAGTCCAAATTTTACATCTTCGGTTTTGGATCGCCAAACTTTAAA
CCATCTATTGAAGATGCTCTGAGG--------------------------------------------------------
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>chr3D_568
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---------------------------------GCATAGGTAGGAGTGATCATCGAGTTAAAACTCAATATTACTAGTGT
ACTGATCCGTCGGGGGCTAAGGCTGGCCATAGTGGTGGTATCATAGCCGGTATCATGCAGTCGGGAATAGCAAACACGCT
CATATGACACATAATTAAGAGAGAGAGAGAGGGGGGGGAGAGAGAGAGGGAGAGAGAGAGAAAGAGAGTAACATAGATAG
ATACCATATCATGTTAAATACTAAATACTATACTACTTTGTGTCATGCATAGCAATAAACATAATCATCTATGACACTAC
CCTATACTATGCACTATGAAGGTAGTATTATACACTAGTATCATATGCATCATACTAGTATATAATACTCCCCGGTATGA
GTAACCTAAGGCAAGCATGCACGCCACCGGCATCTACGTATATATGCGTGTGCGGGTACAGGCCACGTACGAGATGCTTG
CATGCCCCGACGCTTGCACATGGATTCCTGATTCGCTGCACATTTTGGGAGCAACGCAAATGGTGAAACCCTACGCGCCT
CCATACATGCATATACCATGCGCGTGCAGGAGTGATCGATCGTGTTCAAATTCAAACATCGCGGGATTCTAAAAACAAAA
ACAAAATATCAATGCTTGGGAGTACAGTA-----GACGGCATTGAGATGCACCATTGCTGACGGGGCTATAAATACGAGA
CGGGCGTCTGGTTTTATTTCAGGTTTCCGGTGATGTTTGTTTAGTGGGAGAAGACGTTTTCATCGACTGCGAGGCACCTA
TGATGACTACAACATAAACTCTTAAGATGTTATACTGGCTCAGTCTCTCGAAGGTGATTATAGAGGTAGGATGTACGTGC
ATACGTCCGTACTATCAAACTGACTGGCATCGAGATGGAATCGCACTGGAGGGATGATGCGACCCGATCCGCTTTTGCCG
GCGATGGATCCGATCCTTGGATGATTTCTTATAGGTTAACTAGTGCATAGGTACGAGTGACCATCGAGTTAAAACTCAGT
AGTAGTGTACTAATCCGTCGGTGAGGGTGCCACGAT--------------------------------------------
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--------------------------CTTGGGGAATGAAATCTCAAGTGTCACATTCATTTGCCGTACTAT---------
-----------------------------------GTAGCTCATGATGGGCCAAGGACAGCTCCAATTTTGTTGCCGATT
TTTCATCGCAGAAGATACTCCTGTCTAGCCGAATATTATCTTTGGAGGCCGAGCTCCATGGAGCTCCGTTTTGAAAAATT
TG------AATTTTATAAAATTTTCTATTTTTTATGTTTTAAAAAATTCTAAAAAAAACACAGATATACATGATGGTATA
ACGGGCGTGTACTAATCTGTCGGTGGTTG-AGGCAAGCATGCACGCCACCCTCACCTATGTGTGCCCGCAGGTGCAGGCC
ACGTACGTGATTCTTGCATGCCCCGACGAGAGTGCACGCGGATTCTGATTCGCTGCACGTTTTTGAGAGTG---------
------------------------CAGGAGCTAGTAAATATGTCCAAATTCAACGCCCTGCGGGGTTCTAAAAAGAAAAT
AAAAAAAATGATAAACGCTTGGGAGTAGTAGATGATGATATGTTGATATG---TATAGTCTATAGCTGACGGGCTATAAA
TACGGGAGCGGCGCCCGTAAGTTTCATTCACCCAAGAGGAAC--CTAGCTGACTGACCTGCCTGCCTGCGGCCATGAAGA
CATACATTGCTGCCATCCTGCTGGTGCTTTCCCTCGCCGGGCGCCTCTCCGCCGCAGCCGCCGA---CGCCGACGACAAG
GTGGACGCCGTTATCCGTCTCCCGAGCCACGGTACGTAACTGTTACACTATTCGATTGACCAGATAG-------------
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---TTCATCCCTGCACATTTCCATTAGTATGCC----------------------------------------------G
TGCAAATATCTGGA------TAACGGATGCGTGCAGGTCCAGGGGTCGCTGGCTCGGGTGGAGCGACGGCGGCCGTGAAG
GATTTT---GGGCGGCCGAGCTGCTGCGACCGGGAGCGGTGCGGCGGGACCCTGCGGGTCTGTCACTGCGATGATATGTT
CGACCGCAAGTGCCCCGCCACCTGCGCGGAGTGCGTGTCCTTG------------GGCCCATCCCACCACTACTGCGGCG
ACAGTTACCTTGCTGGCCCCGTGCCCAGGTGCACCAAGGTTGACCGCAACGGCGACATCTCCGGCGGTA-----------
----------CGCCCGGCCGCAGCATTGCACCAGGTG--------------------ATGGTGAGTCCAATAAATTGAGC
CGGCCGTTGG-------ACAAGTGGACAGAGTGAGTCGCTGTGCCAGCGTTTGTTCACCTGTTGTGGTCGCTCTTCCCCC
CCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTCTTCCGGGA--TGTTGCTGTAACGCTAGTTTAATTGCACCGATGAAT
AAGATGAGCTGTGTTGATCAGATTGTCGTGCCAGTTTTGGTTCCGTTCAAGACCTCGAGTTCGAGGTGCTCAATGAGGTG
CAGCTACAATTTGTGCTTGGTTCCAGCTTCACCCCCCTGCAT--------GGTTGACTGCGATCTTTTTTGGTTTGCGTC
TTAACTTTTTTTGGTTT--------------CATGTACGTACCATGTAGGCGGCACTTTGGTGATGCCCCAGCCTTCCAC
ATAGTTAAATTTGAATGAAGTTGTTTTCTTTTACCCGAATTTGAATGAAGTTGTTGGTGTGCGCCACAATCACCCACCGA
AAGCTAGGACGTGTTTGGTTACCTGCATATAGCCCAACCAGGCCCGTGCGAAAAGAAAAATGTCTGTTTGGTAGCATACA
GGGAGGCCTGGCTAGCA-CGGCACGAACCTTAAAGCAGCTCAGAGCCCGGCTCGCTGGGATCGCTCAAATCTGCCATTTA
CAGCGAGCTAGGTTGAGCCGGACACAAAGTGGGGCACGGCGTACGCCACAGTGTAGG-----------------------
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>chr3A_721
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-----------------ACGTGGATTCCTGATTCGCTGCACATTTTGGGAGCAACGCAAACGGTGAAACCCTACGCGCCC
CCATACATGCATATACCAGGCGCGTGCAGGAGTGATCGATTGTGTTCAAATTCAAACGTCACGGGATTCTAAAAACATAA
ACAAAAGATCAACGCTTGGGAGTACAGTA-----GATGGCATTGAGATGCACCATTGCTGACGGGGCTATAAATACGAGA
CGGGCGTCTAGTTTTATTTCAGGTTTCCGACGATATTTGTTTAGTGAAAGAAAACGTTCCCGTCGACTGTGAGACACCTA
TAATGACTATAACATAAATTTTTAAGATGTTATATTGGCTCAGTCTTTCGAAGGTGCTTATGAAGATAGGGTGTACGTGC
ATACGTCCGTACTATCAAACTGACTGGCATCCAGATAGAATCACACTGAAGGGATGATGCGACCCGACCCGCTTTCGCCG
GCGATGGATCCGAACCTTGGATGATTTCTTATAGGTTAACTAGTGCATAGGTAGGAGTGACCATCGAGTTAAAACTCATT
AGTAGTGTACTAATCCGTCGGTGAGGATGCCACGATTTTTTTTTTAGAAAAAAAGGATGACCTCGGCCTCTCTATCTGGG
CGATGCATATAACCACTTTATTAATTATTCTTACAAGATTTACAAAGTGATACAACAGTAAGACTAAAGCCACCGTCTAA
GCAACGGACTGTCGCTACATCTATCCAGCTGATGAAGAGGCGCAGATAGCCTGGGCCTAATACCAAACAGACATCGCAGT
CAAGCCTAATATCTAAGACCTGAGACCCCAACCTAGCCACTTGCCGGGTCTGGGGCACACATTGGTCCGGCGTGCTCTCA
GAGGCCGGCGCCGCCAACTGCCACCGCTCCATCTTCAGAACTGTACTGATGCATCAACCTTGCTCGGTCTAGCTATCGTA
GACACCACCATGGCGCCCAACGGCACCTCTTCTCTGCGCACAAACAGCTGAGCACGTCGCGATCGCCACTGATACACCTC
AGCGCTATGCTACCAAGTACCACCAACCGACACAGCTTGAAGTCCTTGAAAGATCTGTCATGCGTAGCACCTGCCGACCA
GGCATGACAAAGCGTAGCACCTGTCGGTCAGGCATGACTTGACATCTCCACCGAAGCTCCGTGCAAGACGAAGCCGCTCC
ACCTCCTGCCTCTGACTTCCAGCGCTGCTCCACAAACAATGCTCCCAAGAGAGAAATGACACCGCAGTGCCGTGATCGTC
CGAACTGGAAAACCAGATCATAGGGTTTCCCCCGGAGCAGCACGAGTGGGTCGACAGTAATTACAGAACGATGCCTTCAT
CAAGGTAACGGCGCAGAACGCCGCCATCGTCTGCCATCGGCTCGGTTTTCACCGGCAACTATGTCTCCCCGACTCGTAGC
CGAGACTAGATTACAAATCACAAGATCCGATCATCCAGTCTCAGGTCGACCACCTCCGACGTAGGAGATGACCACCACTG
CCATAATCCTCGTGATGCGATGCAGACCCGGAGTGCTTCAGCGAGCCGTCGCCGAATCCGATGAGATGCAGCAGTTTGAG
GACGTAACGGCAGCCCGGGACGCGCCTCGGCCGCCGCTGCCGCCATCTCGTACTACTCCCGCCGGCTGCAGCCAAACCCC
CCGTCGCGCCCCGGCCGCCGCTGCCCGCCATCCTCGTCGGGAGGGAGATCCAAATCAGGCCGCCGTCGCCTCAGATCTCA
GGACGCCAGAGGAGGTCCGCCGCCGCCGCGCCACGGGGCCTTCGCCCAGCGACGTTGCAGGCGGCGGCGCAGGAAGGGGG
GTGCACGGGGAGTCGAGGGGAGATCGGGATGTGGCCGCCCGGTGCGGCCCGGCGACGACCGCACGGGGTCGGGAGGAGGA
GTCGGAGTCGGGGAGGGTGCCATGATCTTGGGGAATGAAATCTCAAGTGTCACATTCATTTGCCGTACTATGTACTCACA
CTATCTAAATGCTTTTATATTTATTTATGGAGTGAGTAGCTCATGGTGGGCGAAGGACAACTCCAATTTCGTTGCAGGTT
TTTCATCGCAGAAGATACTACTGTCTAGCTGAATATTGTCTTTGGAGGCCGAGCTCCATGGAGCTCGGTTTTGAAAAAAA
ATAAATCAAATTTTGTCAAATTTTTTATTTTCTATGTTCTAAAAAATTCTGAAAAAAACACAGATATACATGAAGGTATA
ACGGGCGTGTGCTCATTTGTCGGTGGTTAAAGGCAAGCACGCACGCTACCCTCACCCACGTGTGCGTGCAGGTGCAGGCC
GCGTACGTGATTCTTGCATGCCCG------------------------------------TTTTGAGAGTGCGCGCCCCC
ATGCATGCGTGCACCATGCGCGTGCAGGAGCTAGTAATTGTGTCCAAATTCAACGCCCTGCGGGTTTCT-AAAAGAAAAT
AAAAAA--TGATGAACGCTTGGGAGTAATAGATGATGACATGTTGATATGCACTATAGTCTATAGCTGACGGGCTATAAA
TACGGGAGCGGCGCCCGTAAGTTTCATTCACCCAAGAGGAAC--CTAGCTGACTGA----CCTGCCTGCGGCCATGAAGA
CATACATTGCTGCCATCCTGCTGGTGCTTTCCCTCGCTGGGCGCCTCTCCGCCGCCGCCGCCGC---CGATGACGACAAG
GTGGACGCCGTTATCCGTCTCCCGAGCCACGGTACATAACTGTTACACTATTCCATTGACCAGATAG-------------
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---TTCATCCCTGCACATTTCCATTAGTATGCC----------------------------------------------G
TCCAAATATCTGGA------TAACGGATGCGTGCAGGTCCAGGGGTCGCTGGCGCCGGTGAAGCAACGGCGGCCGTGAAG
GATTTT---GAGCGGCCGAGCTGCTGCAACCGGGAGCGGTGCGGCGGGATCCTGCCGATATGTCACTGCGATGATATGTT
CGACCACAAGTGCCCCGCCACCTGCGTGGACTGCGTGTCCTTG------------GGCCGATCTGGCTACTACTGCGGAG
ACAGTTACCTTCCTGGCCCCGTGCCCAGGTGCACCAAGGTTGGCCGCAACGGCGACCTCTCCGGCGGTAACTAGCTAGCG
TCGCCGCCGACGCCCGGCCGCAGCCTTGCACCGGGTG--------------------ATGGTGAATCCAATAAAGTGAGC
CGGCCGGTGG-------GCGAGTGGACGTAGTGAATCACTGTGCCAGCG-TTGTTCGTCTGTTGTGGTCGCTCTTTCCTC
CTTT----------TTTCTTTCTTTCTTTCGGAC----------TGTTGCTGTAACGCTAGTTTAATTGCACCGATGAAT
AAGATGAGCTGTGTTGATCAGATTGTCGTGCTAGTTTTGGTTCCGTTCAAGACCTCGAGTTCGAGGTGCGCAATGAGGCG
CGGCTACAATTTGTGCTTGGTTCCAGCTTCACCCCCCTGCATGGTTGCATGGTTGACTGCGATCTTTTTTAGTTTGTGCC
TTAACTTTTTCTTTTTTCTTTTTCCCTCTGGCATGTACGTACCATGTAGGAAGCACTTTGGTACTCCCCCTGCCATCCAC
ATAGTTAAATTTGAATGAT------------------------------GTTGTTGGTGTGTGACACAATCACCCAACGA
AAGTTAGGACGCATTTGGTTAACTGCATACAGCTTTACCAGGCTCACATGGGGAGAAAAAAGTCTATTTGATTGCATACA
AGGAGGCCCAACTCACATCGGCAAGAACCTTAAAGCAGCCCAGGGCCTGACTCGCAAGGAACACTCGAATCTATCATTTC
CAGCGTGCTACGTTGAGCTGGGCGCAAAGTGGGGCACGGCATACGCCACGGTGTAGGAGGGATCGGGGCGGAGA------
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>chr3A_1665
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-----------------ATGTAACGGGTGCGTGCAGGTCTA-GGGTCGCTGGCGCCGGTAGAGTGACGGCGGAGTTGCCG
CCGGGTATGGGGCGGCCGAGCTGCTGCGACCACGAGAGGTGCGGCGGGTTTATCCGCAGCTGCCGCTGCCTGGACGACTT
CGAGCAC---TGCCCCGCCACCTGCGAGGACTGCGAGAGGGTGGTGACTCCCTCTGGCCGGTACGGCTACTACTGCCACG
ACAGTTACTTTGGCGGCCCCGCGCCCAGGTGCACCAAGGTTGGCCGCAACGCCCACATCTCTAGCGGTAACTAG---GCG
TCGCCGCCGACGTCCGCCGCTTGGATGTCCATGCAGCCAGCATGCGCCGAGTGATGCATGGTGAATCGAATGAAGCGAGC
CGGCCGGCCGGTGGGCTACTAATGGACAGAGTGAATTGCTGTACTAGCG-TTGTTCACCTGTTGTGCTTGCTCTTTCTTT
TCTT----------TTCATCTCTTCTCTTTTTTATCTTTCAGGTTGTTGCTGTAACGCTAGTTTAATTGCATCGATGAAT
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>SNPs
--------------------------------------------S----S-----------------------S---S--
----S-----------S-------------------------------S-------SS----------------------
--------S-----------------------------------------------------------------------
-----S--------------------------------------------------------------------------
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-------------------------------------------------------------------------SS-----
--------------S-----------------------------------------------------------------
---------------------------------------------------------S----------------------
----------S---------------------------------------S-----S---------S---S---------
--------------S------------S----------S-------------S-SSSS----S-----------------
------------------------SSSSSSSSS----------------------------------SS-S---S-----
-------------S------------------------------------------------------------------
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-----------------------------S--------S-----------SS-----S----------------------
-------------S-S-------------------------S-----S----------S---S----------S---S--
------------SS--------------S---------------------------S-SS----------------S---
--S--------------------------SSSSS---------------------S----S----------------S--
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-------S---S-S-S-S--------------------S---SS------------------S---S-----S-------
-------S--------------------------------S-----------------------SSS-----S-------
--------------S-------------S--------------SS-----------SS--S-----SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-S----S----S----S-S----S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
--------SSSSS-SSS------------S----------------S---------------------------------
--------------------------S--------------------------------S--------------------
-------------------------S----------------------------------------------------S-
--------S-----------------------------------------------------------------------
----------S--------S------------------------------------------------------------
----------------------------------------S------------------S-------------------S
-S------------------S-------------S---------------------------------------------
-----------------------------------------------S--------------------------------
-------S------S-----------------------------------------------------------------
---------------------------------S--S----------------------------------S--------
-----------------------------------------------------------------------------S--
----------S-----S--------------------S------------------------------------------
---------------S-SSS----S------------S--------S---------------------------------
S---S-----------------S-------------S-S-----S---S--------S------------S---SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_5263
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-------------------------------------------AACAGCTAGCTGACTGACCG-----------------
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>reverse_7188
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-------------------------------------------------------------------ATTGGGGTTCATG
TCCGACC-------------------------------------------------------------------------
------------------------------------------------------
